Cp4.1LG16g08750 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g08750
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Nuclear transcription factor Y subunit
Location	Cp4.1LG16: 8298473 .. 8304360 (-)
RNA-Seq Expression	Cp4.1LG16g08750
Synteny	Cp4.1LG16g08750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATACTTGGGATACGTGGCATGCGCTGCTGTCGCTACTTTAAAGATGCGGTCCCCACTTTTGCGCCAAGCGTTTCCCGGGCTTTGCTCGTCAAGTTCGTGTCACGTAAGTCAAAATATATTATCCCAATTTCCACTTTTTATCCTGAAAAACGAATTTCCATAACCTTACCCACCCGTGAGATTCAGAACCTCACCACCCACGTCAACTGGGAACCTGCTTTACCCGGTTCACTCGGCTCACAGGCATCGACTTAGATAGCCTAGTTCGAAACTGGAAGGGGAGGTTGCCGGTGGAAGACTAGCTGGAACTGGAGTCGGGTCCCGCAGTGGGTAAAGGGAACAGTAGCCGTAGCTCTTGAATTTGAGTTCCCAAAAGGGTCTTTGCTCTGGCACTGTAGTTACAGTGCTCTCTCATAAGTATGAGAATCGTTGAAGAACTGGATTGAGTCTTCGATTTCTCTTTCTGTTTCTCTCTTTTCCGAGATTCCGAGTGGTTGCGTCCTGAATCTAGGGCTTTGGATTTCCAGAATTTTCCCTCCAAGTGAGTTCTTCTCTTCGTCTGACTTGACTTTGCAAGATTTTGGTTCCTTTTTCTTCTCTTTCTCGTGTATCTAATGTTACTCCAGGGTTTTCTCAATTCAGTTCTTTCTCTTCCCTTTTATGGGTTCTGTTTATTCTCGTTGCATGAAAGCGCGCCGGTTTGAGTTTCTGGATTCATGCGACTAGGATTTGGGTTTTTGGATCACTAGAGTGGAAAATTTCAACAGGTGGTGTTCCTTTGTTTAGGGAAGGGAGTGGAATTGGGATCTTGATGGGATATTTAGAAGTCGTAAGCTTGGGGATTTTTGTTCTTATTGCTTAGGATTGAACTCGCGCCGTCGTATTCAGTTTTGCTCCTTCATCTGTCCCATCTTTTGGCATTGGGTTCTGTTTGTTGTCTGCATGTGGGGATTATGGTTCGTACAGTCCTTATTGGCGGAATTTTGGTTGGAATATCAGTCGCCAAATATCGAAGTGAACGTTTTCTATAGAACGCTATTAGTTACCCTTGCCCTTGCGTGTGGATCATTAATAAGCTGAACTGAAATGCTAAAGAGAACTTATTTAGTACAAGATATTGACTATGATTTGATATTTGGGTGGAGCGTTTTAGGATGATTCATCAATATAAGCCTGCCACTTTTTCCCCTCTCGTTGTCATTTCTGAATTGTGGTTGGAAGAGTGATAGAAAAAGGTCGCCTATGATAATTTATAGTCTAGCATGGAAATAAATCGAGCACCAAAATAGGATACGACGGTGGAAATAGATAACTGAAGTTGTTTTGAAACTTGTATGGAAATAAATAGAGCTCCGCTCAACATTACGGGAATTGGTTTATGATTTGAATTATAGATCGTGGATGATCTTGGCTTTCCGTTGAGTTTGTTAGATATGCTGCACTTCTGTCTCTTCAAAATTGAAAATTTACGAGTTCCAAGTTGTGTCCGAAATTATGCAATTGCAAAATAAGAACTTTTTTGGTTTCTGTCTCTGTTATCATAGAACTCAATTGATGATAAGTAAACAACATAGCTTGGAAGATCTGAAGGAATTAATTAAAGGTGTAGAGCATTTTACTTCCAATTTGGTGATAAGCCTCAGTCAAGCGGAAAATGAGCAGTGCTCTGCACAAGGATTGGATATAGTTAAAGTATGCTCTGGGAAAGAGTTATGTAATCATAATTGGAAGGAAATAAAAAACGTAGTTGATCGAACGAACCGCACTCCTTCGTATACGTCAGGAGTCCATTGGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGTATCTTTTGTTTCATTTCTTCTGGAACAATCACAAACACTTTTTTGTAAGGATGGCACTTGCTTGTGCTTGAGGTTAAGCTTTTCTTTGTGATTATCTCCTAGCCTTTCCCTCTATTTTCTCTCAGCTTCCTGACTATTAAACCCCTCCAATTTGACAGAAAACTATTGCCTCCCTCATCTCAGACCATTTAATTTAAAACTGTAAGCAAAACTGCTTCAGCTGGCTGGTGAATATTCTTCTTTTTAATTTCCTTCTCTCGCACGTGTTATTTTAAATCGAAGGAATCAAACAGTTTCCCCTTATCTTGAGAAAAGAATAATGAGCATGGACGATTTCTAAGGTTTTCAAAATGAACGATGCTTCGTGGTTCCTCTTTTCCTTCTGATGTCTTCTTTCCGGTGCTTTTATCATAGGGTGACGGCTTGTTCTCTGTTTATCCAACATTTATTTTGCATGGCCTATGTATTCTAGTTGACTCCATCCTTTTATCTTATCTAACATATATATTTGCGAAGAAGATATGCAGTCAAAGCCTAGAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCTGAACCTTGGTGGCGTAGTATTGGATACAATCATATCTCCCCGCCAGCAGCAGGAGGAAATTTGTCCAATTCAACATCACTGGAATGTCCTAATGGTGCCTCAGAATCTAATGACGGACCGTCAATGTCAAATGATGATTTGAATGAAGATGATGATGATGACACCACAAAAGATTCACATGGTATGGGTCTCAACTTACCTGCTTACTAAATCATGTTATTGTTCAAAGTAAGGCACTTATTGTTTTTAGCCTCCTTAGTTATGAGCTGGAATTAGTGTACATGATCTTGAAAACTGAGGACAATATAACCTTATTGGATTGTTAACAAACATGTTATTATCAATTCAGCTGTAAGTTATGGGCAAGTACAGAACAACAGTCAGCATGCTGTTTCTGCTGCACCTACAGTGCATGGTGGATGTATCACACAACCTTCTCAGCTTGAACTTGTAGGCCACTCTATTGTGAGTTCATTTGCTAGTCTGGTTTTTTCTACTTTATAGATGTCCTTCTGACTCTCAGTGTCCAGTTTTTTAATATTGAACAAATTGGTTTCTTGAAACATCATATTTAAGATGCTTTTAAATTATGTGGGATTACTAGTTTATGTTGATCTTTTTCAGGCATGTGCATCAAACCTATATCAGGATCCTTATTATGCTGGAGTGATGGCTGCCTATGGACATCAACCGGTATGTGGGTTAAGAAAATAAAAGATCAGATGATGATATGTACACGTATATGTATATCTTACTGGTAATTTTTGCACCATGTTCACAATTTTTTTAATTATATTTTAGCCCTGGGTAAACTTGATGGTACTATACCTTTTGCATCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTGCTTTACCTTTTCAATTATTCAGGAACTTCATTGTTATTCCTTGTCCATATTTTCACTTTCTCAAACTATCTCAGGTACAATAGCATGTGAGTATCTAATGAACTAACTGAAAATTTCCAGTTTCTTGGAAGAGTTTGTCGTATGATTATTATAGTATCTTGGCCTGGAATTATTTATTTCTTTTTTCTTGGCCACAATGACAAGGTCATATGTCAAGGATGTTTGAGATCATTGTGGATGTAAACATTTTTTTGGGATACGTAAGAATTGAAGTTTGCCTCTGACAAGTCCTTATGGTAGGGTTATCCTCCCTTTCTTGGGATGCCGCATGCTAGAATGGCTTTACCTCTTGAGGTGACACAGGAACCTGTTTTTGTGAATGCCAAACAATATCAAGGGATCCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTAATAAAAATTAGAAAGGTACAACTGCTATTCAAATAATCGTGTTTCATGTACTACAACTTGTCTATTATACATGTTTAAGTAGCTGGGAGTCTAACAACGCCTTTTTAATTGTATTTTACTCTTAATGAAGTTCATTCTTTCCTATGCTGTAAATTTGATTTGGTACTTACAAAATTCTTTACCGAGTACTTTTTCATCTGTTTAATGACCATAAACATGACATGTGAGTGAAGGGAAACTAAAAAGTTATTTAGTTGTGCTGGACAGTGCAGTGGATGTACTCACATTGGCTTTTTAAAATAGGTATAAGGTTAGTACCAACACCCATATGAATTACCAGGTCGTATCAAGACCTTACAAGACTGATAAAAAGATTTAAAGGAAAGATGTAATGTTGCATTGTGATTATTGTTTTGCAAGACCAGAGCATGTCAACTGAAGGTAAAGGTATAATAAACTGTCTCCATTTAAATCACAACTGATTCAGGGATGAAGACATTTAAGTTTTTAATTCGACTTCTGAGCCTTCATTTATATTTCACGTTGGGTGTTGGGGTGGGTGACCAGGGATGGTGGACTCACTAATTCAAGTTGAGTTATACTGAATCAAAGCTGGTCGTTCATGATTTCATGATTTCTTGTTGTTGTATAGCTTATAATAGATAATTCATTGTCCTTTGAGACAAATATGGCTTGGCTGACTCAGACTCATTTCTGAATATTGTTCTATATGTGTGTGCGCTCGCATGAGCCACGGTCAGCTTAGAAACATCAGATGTGATTGAGAGTTGGACGGGTCATTTGGCTGGTAGGTGGTTCTGTATGTTCGAGGAGTGATGATTGTTCACTCTCCATTTTCTTTTTCTTCTTTCCCGCTTGAACAATTCTTTTAGTATAGCCTATATGCAGGTTTGTATGTTTCTGAAGTTCCTCCAATATTTAGCTTGTGTTTTATGCTACACAGCCGTATCTTCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGAGGACGATTTGCCAAGAAAAATGAAGTTAATTCTTCGAGTTCTACTATGAAGAACAAGGACTCTGGTTCTGGTCAAGCTTTCTCGTCGCACTCTGCTGGTTCATCGGGTTCTGAAGCTGCGCCTTGTGCCTTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGTGAGGACGCAGTTGCATGAGGTGTACGAAGCTCGAAGTTATGTGAATGGCGGTGGACAATTTCATAATTACAGTAGCTTCCAAGCTTCCTCATATGCTTTACGGTCTGGTGAGAGAGGTGATGATGGAGACTGTTCGGGACAGCAACGAGGAAGCATCTCAGAAAATCAGGCAGCACAGAGGCGTCTTGCCATCAAGTGAACCTCCTGGTTGCGAAAATATGGGGTGCCCCTAGGCTATCTACGGGCTACATTCCCTGGCAGTTTTCTGCCAGGCGGCAAATCATTCTTGGCTTTGTTCTGGTGCTTGTTGCTTGATCGTAAAGGAGACGGGATGATATAAGTTGGCCATTTGAGCCCTTGTTCTGGTTCAGTCCTTGGATGCTTTATTCCAACCTCTCCCATTTTTAACTTGTGTATACAACAGACTCCATAGATTTCGAACAGTTTTCCTTTTTAATTAACGAACACCTTGCTAGATCGAATGCTCAACTGTCATGTACTTGTAAGTGTGTCAAGGCTTGAACTTTGATCCATGATTTGGTTGCAAATTTATATCCAAGTTTTCCCGGTTTCAAATATGTTTCTTTGCCATTATATGAATCCGGATTTCAGCACCCACTGGGAATACT

mRNA sequence

AAAAATACTTGGGATACGTGGCATGCGCTGCTGTCGCTACTTTAAAGATGCGGTCCCCACTTTTGCGCCAAGCGTTTCCCGGGCTTTGCTCGTCAAGTTCGTGTCACGTAAGTCAAAATATATTATCCCAATTTCCACTTTTTATCCTGAAAAACGAATTTCCATAACCTTACCCACCCGTGAGATTCAGAACCTCACCACCCACGTCAACTGGGAACCTGCTTTACCCGGTTCACTCGGCTCACAGGCATCGACTTAGATAGCCTAGTTCGAAACTGGAAGGGGAGGTTGCCGGTGGAAGACTAGCTGGAACTGGAGTCGGGTCCCGCAGTGGGTAAAGGGAACAGTAGCCGTAGCTCTTGAATTTGAGTTCCCAAAAGGGTCTTTGCTCTGGCACTGTAGTTACAGTGCTCTCTCATAAGTATGAGAATCGTTGAAGAACTGGATTGAGTCTTCGATTTCTCTTTCTGTTTCTCTCTTTTCCGAGATTCCGAGTGGTTGCGTCCTGAATCTAGGGCTTTGGATTTCCAGAATTTTCCCTCCAAAAGATATGCAGTCAAAGCCTAGAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCTGAACCTTGGTGGCGTAGTATTGGATACAATCATATCTCCCCGCCAGCAGCAGGAGGAAATTTGTCCAATTCAACATCACTGGAATGTCCTAATGGTGCCTCAGAATCTAATGACGGACCGTCAATGTCAAATGATGATTTGAATGAAGATGATGATGATGACACCACAAAAGATTCACATGCTGTAAGTTATGGGCAAGTACAGAACAACAGTCAGCATGCTGTTTCTGCTGCACCTACAGTGCATGGTGGATGTATCACACAACCTTCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCTATATCAGGATCCTTATTATGCTGGAGTGATGGCTGCCTATGGACATCAACCGGGTTATCCTCCCTTTCTTGGGATGCCGCATGCTAGAATGGCTTTACCTCTTGAGGTGACACAGGAACCTGTTTTTGTGAATGCCAAACAATATCAAGGGATCCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTAATAAAAATTAGAAAGCCGTATCTTCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGAGGACGATTTGCCAAGAAAAATGAAGTTAATTCTTCGAGTTCTACTATGAAGAACAAGGACTCTGGTTCTGGTCAAGCTTTCTCGTCGCACTCTGCTGGTTCATCGGGTTCTGAAGCTGCGCCTTGTGCCTTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGTGAGGACGCAGTTGCATGAGGTGTACGAAGCTCGAAGTTATGTGAATGGCGGTGGACAATTTCATAATTACAGTAGCTTCCAAGCTTCCTCATATGCTTTACGGTCTGGTGAGAGAGGTGATGATGGAGACTGTTCGGGACAGCAACGAGGAAGCATCTCAGAAAATCAGGCAGCACAGAGGCGTCTTGCCATCAAGTGAACCTCCTGGTTGCGAAAATATGGGGTGCCCCTAGGCTATCTACGGGCTACATTCCCTGGCAGTTTTCTGCCAGGCGGCAAATCATTCTTGGCTTTGTTCTGGTGCTTGTTGCTTGATCGTAAAGGAGACGGGATGATATAAGTTGGCCATTTGAGCCCTTGTTCTGGTTCAGTCCTTGGATGCTTTATTCCAACCTCTCCCATTTTTAACTTGTGTATACAACAGACTCCATAGATTTCGAACAGTTTTCCTTTTTAATTAACGAACACCTTGCTAGATCGAATGCTCAACTGTCATGTACTTGTAAGTGTGTCAAGGCTTGAACTTTGATCCATGATTTGGTTGCAAATTTATATCCAAGTTTTCCCGGTTTCAAATATGTTTCTTTGCCATTATATGAATCCGGATTTCAGCACCCACTGGGAATACT

Coding sequence (CDS)

ATGCAGTCAAAGCCTAGAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCTGAACCTTGGTGGCGTAGTATTGGATACAATCATATCTCCCCGCCAGCAGCAGGAGGAAATTTGTCCAATTCAACATCACTGGAATGTCCTAATGGTGCCTCAGAATCTAATGACGGACCGTCAATGTCAAATGATGATTTGAATGAAGATGATGATGATGACACCACAAAAGATTCACATGCTGTAAGTTATGGGCAAGTACAGAACAACAGTCAGCATGCTGTTTCTGCTGCACCTACAGTGCATGGTGGATGTATCACACAACCTTCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCTATATCAGGATCCTTATTATGCTGGAGTGATGGCTGCCTATGGACATCAACCGGGTTATCCTCCCTTTCTTGGGATGCCGCATGCTAGAATGGCTTTACCTCTTGAGGTGACACAGGAACCTGTTTTTGTGAATGCCAAACAATATCAAGGGATCCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTAATAAAAATTAGAAAGCCGTATCTTCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGAGGACGATTTGCCAAGAAAAATGAAGTTAATTCTTCGAGTTCTACTATGAAGAACAAGGACTCTGGTTCTGGTCAAGCTTTCTCGTCGCACTCTGCTGGTTCATCGGGTTCTGAAGCTGCGCCTTGTGCCTTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGTGAGGACGCAGTTGCATGAGGTGTACGAAGCTCGAAGTTATGTGAATGGCGGTGGACAATTTCATAATTACAGTAGCTTCCAAGCTTCCTCATATGCTTTACGGTCTGGTGAGAGAGGTGATGATGGAGACTGTTCGGGACAGCAACGAGGAAGCATCTCAGAAAATCAGGCAGCACAGAGGCGTCTTGCCATCAAGTGA

Protein sequence

MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASESNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPSQLELVGHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEVRTQLHEVYEARSYVNGGGQFHNYSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK

Homology

[Close]

BLAST of Cp4.1LG16g08750 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.1e-54
Identity = 142/278 (51.08%), Postives = 175/278 (62.95%), Query Frame = 0


Query: 1   MQSKPRSVNQLE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGAS 60
           MQSKP   N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+CPNG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGPSMSNDDLNEDDDDDTTKDSH-AVSYGQVQNNSQHAVSAAPTV---HGGCITQPS 120
           ESND  S S D     ++D T KDS  A S   V N+       A ++   H   + QP 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPP 120

Query: 121 QLELVGHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVN 180
             ELVGH IAC  N YQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VN
Sbjct: 121 --ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVN 180

Query: 181 AKQYQGILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSS 240
           AKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV +  
Sbjct: 181 AKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA-- 240

Query: 241 STMKNKDSGSGQAFSSHSAGSSGSEAAPCALAETWNSS 273
                +D+G        +  SSGSE       ET NSS
Sbjct: 241 ----GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of Cp4.1LG16g08750 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.3e-46
Identity = 148/339 (43.66%), Postives = 186/339 (54.87%), Query Frame = 0


Query: 9   NQLESEPPNMQQTSSYS-EPWWR-SIGYNHISPPAAGGNLSNSTSLECPNGASESNDGPS 68
           N+++SE      +S  S  PW R +   N  S   AG   S S +L     A ESN   S
Sbjct: 15  NKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL-----ALESNGSKS 74

Query: 69  MSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPSQLELVGHSIAC 128
            SN D   + +   T      S G   + +Q       ++H G    P   +LVGH++  
Sbjct: 75  PSNRDNTVNKESQVTTSPQ--SAGDYSDKNQE------SLHHGITQPPPHPQLVGHTVGW 134

Query: 129 A-SNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRR 188
           A SN YQDPYYAGVM AYGH P G+ P+ GMPH+RM LP E+ QEPVFVNAKQYQ ILRR
Sbjct: 135 ASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVNAKQYQAILRR 194

Query: 189 RQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDSGS 248
           RQARAKAE+E KLIK RKPYLHESRHQHAMRR RG+GGRFAKK   N+ +S  K ++  +
Sbjct: 195 RQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKK--TNTEASKRKAEEKSN 254

Query: 249 GQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEVRTQLHEVYEARSYVNGGGQFHNYSSF 308
           G    S S+ +S          E WN      + RT   +                    
Sbjct: 255 GHVTQSPSSSNSDQ-------GEAWNG-----DYRTPQGD------------------EM 303

Query: 309 QASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 344
           Q+S+Y     +R ++G+CSGQQ  S+S N  +Q RLAIK
Sbjct: 315 QSSAY-----KRREEGECSGQQWNSLSSNHPSQARLAIK 303

[Close]

BLAST of Cp4.1LG16g08750 vs. ExPASy Swiss-Prot
Match: Q9SYH4 (Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NFYA5 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.0e-20
Identity = 75/178 (42.13%), Postives = 101/178 (56.74%), Query Frame = 0


Query: 96  SQHAVSAAPTVHGGCITQPSQLELVGHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGM 155
           SQ +V  APT   G I+   Q     H      N +  P YA    A  H       +G+
Sbjct: 115 SQDSVFPAPT--SGQISWSLQCAETSH-----FNGFLAPEYASTPTALPHL----EMMGL 174

Query: 156 PHARMALPLEVTQ-EPVFVNAKQYQGILRRRQARAKAEVENKLIKIRKPYLHESRHQHAM 215
             +R+ LP  + + EP+FVNAKQY  ILRRR+ RAK E +NKLIK RKPYLHESRH HA+
Sbjct: 175 VSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKPYLHESRHLHAL 234

Query: 216 RRARGSGGRFAKKNEVNSSSSTMKNKDSGSGQAFSSHSAGSSGSEAAPCALAETWNSS 273
           +RARGSGGRF    ++  SS+++ +    +GQ FS    G  GS     +++ + NS+
Sbjct: 235 KRARGSGGRFLNTKKLQESSNSLCSSQMANGQNFSMSPHG-GGSGIGSSSISPSSNSN 280

[Close]

BLAST of Cp4.1LG16g08750 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.7e-20
Identity = 62/127 (48.82%), Postives = 75/127 (59.06%), Query Frame = 0


Query: 131 YQDPYYAGVMAAYGHQP-GYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRR 190
           Y DPYY  V A   + P  YP      +GM    + L  +  +EPVFVNAKQY GILRRR
Sbjct: 55  YPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRR 114

Query: 191 QARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRF--AKKNEVNSSSSTMKNKDSG 250
           Q+RAK E  N+ IK +KPY+HESRH HA+RR RG GGRF  AKK   +         D  
Sbjct: 115 QSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKEEEEATSDEN 174

[Close]

BLAST of Cp4.1LG16g08750 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.3e-20
Identity = 63/140 (45.00%), Postives = 89/140 (63.57%), Query Frame = 0


Query: 122 HSIACASNLYQDPYYAGVMA--AYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 181
           +S+A     Y DPYY  + A     +   +   +G+    + LP +  +EPVFVNAKQY 
Sbjct: 51  NSMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYH 110

Query: 182 GILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRF---AKKNEVNSSSST 241
           GILRRRQ+RA+ E +NK+IK RKPYLHESRH HA+RR RG GGRF    K++E +  SS 
Sbjct: 111 GILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSH 170

Query: 242 MKNKDSGSGQAFSSHSAGSS 257
            +  +  +G++  + S+G+S
Sbjct: 171 EEKSNLSAGKSAMAASSGTS 190

[Close]

BLAST of Cp4.1LG16g08750 vs. NCBI nr
Match: XP_023512693.1 (nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512694.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 664 bits (1714), Expect = 2.14e-240
Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0


Query: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASE 60
           MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPSQLELV 120
           SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPSQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPSQLELV 120

Query: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180
           GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180

Query: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240
           ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK
Sbjct: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240

Query: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEVRTQLHEVYEARSYVNGGGQFHN 300
           DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEVRTQLHEVYEARSYVNGGGQFHN
Sbjct: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEVRTQLHEVYEARSYVNGGGQFHN 300

Query: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343
           YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of Cp4.1LG16g08750 vs. NCBI nr
Match: KAG7010273.1 (Nuclear transcription factor Y subunit A-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 657 bits (1695), Expect = 1.69e-237
Identity = 339/343 (98.83%), Postives = 339/343 (98.83%), Query Frame = 0


Query: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASE 60
           MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPSQLELV 120
           SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQP QLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180
           GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180

Query: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240
           ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK
Sbjct: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240

Query: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEVRTQLHEVYEARSYVNGGGQFHN 300
           DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQE RTQLHE YEARSYVNG GQFHN
Sbjct: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSGQFHN 300

Query: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343
           YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of Cp4.1LG16g08750 vs. NCBI nr
Match: XP_022986703.1 (nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita maxima] >XP_022986704.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 650 bits (1678), Expect = 6.58e-235
Identity = 336/343 (97.96%), Postives = 337/343 (98.25%), Query Frame = 0


Query: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASE 60
           MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHIS PAAGGNLSNSTSLECPNGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISSPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPSQLELV 120
           SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNN QHAVSAAPTVHGGCITQP QLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNCQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180
           GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180

Query: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240
           ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSST+KNK
Sbjct: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTVKNK 240

Query: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEVRTQLHEVYEARSYVNGGGQFHN 300
           DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQE RTQLHE YEARSYVNG GQFHN
Sbjct: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSGQFHN 300

Query: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343
           YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of Cp4.1LG16g08750 vs. NCBI nr
Match: XP_022944166.1 (nuclear transcription factor Y subunit A-1-like isoform X3 [Cucurbita moschata] >XP_022944167.1 nuclear transcription factor Y subunit A-1-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 649 bits (1675), Expect = 1.89e-234
Identity = 336/343 (97.96%), Postives = 337/343 (98.25%), Query Frame = 0


Query: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASE 60
           MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYN ISPPAAGGNLSNSTSLECPNGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPSQLELV 120
           SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQP QLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180
           GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180

Query: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240
           ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK
Sbjct: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240

Query: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEVRTQLHEVYEARSYVNGGGQFHN 300
           DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQE RTQLHE Y+ARSYVNG  QFHN
Sbjct: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHN 300

Query: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343
           YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of Cp4.1LG16g08750 vs. NCBI nr
Match: XP_023512695.1 (nuclear transcription factor Y subunit A-1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 648 bits (1672), Expect = 4.48e-234
Identity = 338/343 (98.54%), Postives = 338/343 (98.54%), Query Frame = 0


Query: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASE 60
           MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPSQLELV 120
           SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPSQLEL 
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPSQLEL- 120

Query: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180
               ACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 121 ----ACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180

Query: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240
           ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK
Sbjct: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240

Query: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEVRTQLHEVYEARSYVNGGGQFHN 300
           DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEVRTQLHEVYEARSYVNGGGQFHN
Sbjct: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEVRTQLHEVYEARSYVNGGGQFHN 300

Query: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343
           YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 338

[Close]

BLAST of Cp4.1LG16g08750 vs. ExPASy TrEMBL
Match: A0A6J1JHB5 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111484375 PE=3 SV=1)

HSP 1 Score: 650 bits (1678), Expect = 3.19e-235
Identity = 336/343 (97.96%), Postives = 337/343 (98.25%), Query Frame = 0


Query: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASE 60
           MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHIS PAAGGNLSNSTSLECPNGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISSPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPSQLELV 120
           SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNN QHAVSAAPTVHGGCITQP QLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNCQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180
           GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180

Query: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240
           ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSST+KNK
Sbjct: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTVKNK 240

Query: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEVRTQLHEVYEARSYVNGGGQFHN 300
           DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQE RTQLHE YEARSYVNG GQFHN
Sbjct: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSGQFHN 300

Query: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343
           YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of Cp4.1LG16g08750 vs. ExPASy TrEMBL
Match: A0A6J1FTP1 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111448699 PE=3 SV=1)

HSP 1 Score: 649 bits (1675), Expect = 9.13e-235
Identity = 336/343 (97.96%), Postives = 337/343 (98.25%), Query Frame = 0


Query: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASE 60
           MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYN ISPPAAGGNLSNSTSLECPNGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPSQLELV 120
           SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQP QLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180
           GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180

Query: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240
           ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK
Sbjct: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240

Query: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEVRTQLHEVYEARSYVNGGGQFHN 300
           DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQE RTQLHE Y+ARSYVNG  QFHN
Sbjct: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHN 300

Query: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343
           YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of Cp4.1LG16g08750 vs. ExPASy TrEMBL
Match: A0A6J1FW74 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111448699 PE=3 SV=1)

HSP 1 Score: 646 bits (1666), Expect = 4.20e-233
Identity = 334/341 (97.95%), Postives = 335/341 (98.24%), Query Frame = 0


Query: 3   SKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASESN 62
           SKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYN ISPPAAGGNLSNSTSLECPNGASESN
Sbjct: 21  SKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASESN 80

Query: 63  DGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPSQLELVGH 122
           DGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQP QLELVGH
Sbjct: 81  DGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELVGH 140

Query: 123 SIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGIL 182
           SIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGIL
Sbjct: 141 SIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGIL 200

Query: 183 RRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDS 242
           RRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDS
Sbjct: 201 RRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDS 260

Query: 243 GSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEVRTQLHEVYEARSYVNGGGQFHNYS 302
           GSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQE RTQLHE Y+ARSYVNG  QFHNYS
Sbjct: 261 GSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHNYS 320

Query: 303 SFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343
           SFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 321 SFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 361

[Close]

BLAST of Cp4.1LG16g08750 vs. ExPASy TrEMBL
Match: A0A6J1JES9 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111484375 PE=3 SV=1)

HSP 1 Score: 634 bits (1636), Expect = 6.66e-229
Identity = 331/343 (96.50%), Postives = 332/343 (96.79%), Query Frame = 0


Query: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASE 60
           MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHIS PAAGGNLSNSTSLECPNGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISSPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPSQLELV 120
           SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNN QHAVSAAPTVHGGCITQP QLEL 
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNCQHAVSAAPTVHGGCITQPPQLEL- 120

Query: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180
               ACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 121 ----ACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180

Query: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240
           ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSST+KNK
Sbjct: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTVKNK 240

Query: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEVRTQLHEVYEARSYVNGGGQFHN 300
           DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQE RTQLHE YEARSYVNG GQFHN
Sbjct: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSGQFHN 300

Query: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343
           YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 338

[Close]

BLAST of Cp4.1LG16g08750 vs. ExPASy TrEMBL
Match: A0A6J1FYI1 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111448699 PE=3 SV=1)

HSP 1 Score: 630 bits (1624), Expect = 8.77e-227
Identity = 329/341 (96.48%), Postives = 330/341 (96.77%), Query Frame = 0


Query: 3   SKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASESN 62
           SKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYN ISPPAAGGNLSNSTSLECPNGASESN
Sbjct: 21  SKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASESN 80

Query: 63  DGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPSQLELVGH 122
           DGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQP QLEL   
Sbjct: 81  DGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLEL--- 140

Query: 123 SIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGIL 182
             ACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGIL
Sbjct: 141 --ACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGIL 200

Query: 183 RRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDS 242
           RRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDS
Sbjct: 201 RRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDS 260

Query: 243 GSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEVRTQLHEVYEARSYVNGGGQFHNYS 302
           GSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQE RTQLHE Y+ARSYVNG  QFHNYS
Sbjct: 261 GSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHNYS 320

Query: 303 SFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343
           SFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 321 SFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 356

[Close]

BLAST of Cp4.1LG16g08750 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 216.1 bits (549), Expect = 4.5e-56
Identity = 140/277 (50.54%), Postives = 175/277 (63.18%), Query Frame = 0


Query: 1   MQSKPRSVNQLE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGAS 60
           MQSKP   N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+CPNG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTV---HGGCITQPSQ 120
           ESND  S S D     ++D T KDS A +  +  N+       A ++   H   + QP  
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIRNMHDQPLVQPP- 120

Query: 121 LELVGHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNA 180
            ELVGH IAC  N YQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNA
Sbjct: 121 -ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNA 180

Query: 181 KQYQGILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSS 240
           KQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV +   
Sbjct: 181 KQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA--- 240

Query: 241 TMKNKDSGSGQAFSSHSAGSSGSEAAPCALAETWNSS 273
               +D+G        +  SSGSE       ET NSS
Sbjct: 241 ---GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 268

[Close]

BLAST of Cp4.1LG16g08750 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 216.1 bits (549), Expect = 4.5e-56
Identity = 140/277 (50.54%), Postives = 175/277 (63.18%), Query Frame = 0


Query: 1   MQSKPRSVNQLE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGAS 60
           MQSKP   N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+CPNG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTV---HGGCITQPSQ 120
           ESND  S S D     ++D T KDS A +  +  N+       A ++   H   + QP  
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIRNMHDQPLVQPP- 120

Query: 121 LELVGHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNA 180
            ELVGH IAC  N YQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNA
Sbjct: 121 -ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNA 180

Query: 181 KQYQGILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSS 240
           KQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV +   
Sbjct: 181 KQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA--- 240

Query: 241 TMKNKDSGSGQAFSSHSAGSSGSEAAPCALAETWNSS 273
               +D+G        +  SSGSE       ET NSS
Sbjct: 241 ---GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 268

[Close]

BLAST of Cp4.1LG16g08750 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 213.8 bits (543), Expect = 2.2e-55
Identity = 142/278 (51.08%), Postives = 175/278 (62.95%), Query Frame = 0


Query: 1   MQSKPRSVNQLE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGAS 60
           MQSKP   N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+CPNG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGPSMSNDDLNEDDDDDTTKDSH-AVSYGQVQNNSQHAVSAAPTV---HGGCITQPS 120
           ESND  S S D     ++D T KDS  A S   V N+       A ++   H   + QP 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPP 120

Query: 121 QLELVGHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVN 180
             ELVGH IAC  N YQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VN
Sbjct: 121 --ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVN 180

Query: 181 AKQYQGILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSS 240
           AKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV +  
Sbjct: 181 AKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA-- 240

Query: 241 STMKNKDSGSGQAFSSHSAGSSGSEAAPCALAETWNSS 273
                +D+G        +  SSGSE       ET NSS
Sbjct: 241 ----GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of Cp4.1LG16g08750 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 213.8 bits (543), Expect = 2.2e-55
Identity = 142/278 (51.08%), Postives = 175/278 (62.95%), Query Frame = 0


Query: 1   MQSKPRSVNQLE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGAS 60
           MQSKP   N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+CPNG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGPSMSNDDLNEDDDDDTTKDSH-AVSYGQVQNNSQHAVSAAPTV---HGGCITQPS 120
           ESND  S S D     ++D T KDS  A S   V N+       A ++   H   + QP 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPP 120

Query: 121 QLELVGHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVN 180
             ELVGH IAC  N YQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VN
Sbjct: 121 --ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVN 180

Query: 181 AKQYQGILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSS 240
           AKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV +  
Sbjct: 181 AKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA-- 240

Query: 241 STMKNKDSGSGQAFSSHSAGSSGSEAAPCALAETWNSS 273
                +D+G        +  SSGSE       ET NSS
Sbjct: 241 ----GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of Cp4.1LG16g08750 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 186.4 bits (472), Expect = 3.8e-47
Identity = 148/339 (43.66%), Postives = 186/339 (54.87%), Query Frame = 0


Query: 9   NQLESEPPNMQQTSSYS-EPWWR-SIGYNHISPPAAGGNLSNSTSLECPNGASESNDGPS 68
           N+++SE      +S  S  PW R +   N  S   AG   S S +L     A ESN   S
Sbjct: 15  NKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL-----ALESNGSKS 74

Query: 69  MSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPSQLELVGHSIAC 128
            SN D   + +   T      S G   + +Q       ++H G    P   +LVGH++  
Sbjct: 75  PSNRDNTVNKESQVTTSPQ--SAGDYSDKNQE------SLHHGITQPPPHPQLVGHTVGW 134

Query: 129 A-SNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRR 188
           A SN YQDPYYAGVM AYGH P G+ P+ GMPH+RM LP E+ QEPVFVNAKQYQ ILRR
Sbjct: 135 ASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVNAKQYQAILRR 194

Query: 189 RQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDSGS 248
           RQARAKAE+E KLIK RKPYLHESRHQHAMRR RG+GGRFAKK   N+ +S  K ++  +
Sbjct: 195 RQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKK--TNTEASKRKAEEKSN 254

Query: 249 GQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEVRTQLHEVYEARSYVNGGGQFHNYSSF 308
           G    S S+ +S          E WN      + RT   +                    
Sbjct: 255 GHVTQSPSSSNSDQ-------GEAWNG-----DYRTPQGD------------------EM 303

Query: 309 QASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 344
           Q+S+Y     +R ++G+CSGQQ  S+S N  +Q RLAIK
Sbjct: 315 QSSAY-----KRREEGECSGQQWNSLSSNHPSQARLAIK 303

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g08750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXV5	3.1e-54	51.08	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	5.3e-46	43.66	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9SYH4	1.0e-20	42.13	Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	1.7e-20	48.82	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	2.3e-20	45.00	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Cp4.1LG16g08750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512693.1	2.14e-240	100.00	nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita pepo subsp...	[more]
KAG7010273.1	1.69e-237	98.83	Nuclear transcription factor Y subunit A-1 [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022986703.1	6.58e-235	97.96	nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita maxima] >X...	[more]
XP_022944166.1	1.89e-234	97.96	nuclear transcription factor Y subunit A-1-like isoform X3 [Cucurbita moschata] ...	[more]
XP_023512695.1	4.48e-234	98.54	nuclear transcription factor Y subunit A-1-like isoform X2 [Cucurbita pepo subsp...	[more]

BLAST of Cp4.1LG16g08750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JHB5	3.19e-235	97.96	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114843...	[more]
A0A6J1FTP1	9.13e-235	97.96	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1FW74	4.20e-233	97.95	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1JES9	6.66e-229	96.50	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114843...	[more]
A0A6J1FYI1	8.77e-227	96.48	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]

BLAST of Cp4.1LG16g08750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12840.2	4.5e-56	50.54	nuclear factor Y, subunit A1	[more]
AT5G12840.4	4.5e-56	50.54	nuclear factor Y, subunit A1	[more]
AT5G12840.1	2.2e-55	51.08	nuclear factor Y, subunit A1	[more]
AT5G12840.3	2.2e-55	51.08	nuclear factor Y, subunit A1	[more]
AT3G20910.1	3.8e-47	43.66	nuclear factor Y, subunit A9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 170..192 score: 74.15 coord: 201..224 score: 81.94
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 166..227 e-value: 3.3E-35 score: 132.9
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 169..224 e-value: 4.4E-26 score: 91.2
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 31..334
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 167..227 score: 36.393036
None	No IPR available	GENE3D	6.10.250.2430		coord: 167..229 e-value: 4.0E-30 score: 106.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 312..343
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..259
None	No IPR available	PANTHER	PTHR12632:SF59	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9	coord: 31..334
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 172..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g08750.1	Cp4.1LG16g08750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity