Cp4.1LG16g08320 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTGGATGTTGGCAGCACCAGAGAAGAAACAGCGTGTTCCTTCAGCATATAATAGGTTCATCAAGTAAGTTGATGGCTTAATTAGTTTGGGATTAGTGATCTTAATTAACCTTAATTAATGGGTTTAAGTGTTTTGTTTTGTAGAGAGGAAATCCAAAGGATTAAGGCGAACAATCCCGACATTAGCCACAGAGAAGCCTTTAGCACCGCCGCTAAAAATGTAAGTTCTCGAACCTCTTGCTCTTGCTCGAAACTAAGTTCCGAGTTTAAAGCTTTTGAGACATATATAGAAAGGTCTTTGATTAGACGTACATGACGATACGAGAAGAGTTGTAATTGAGATGAAATTGACGACGGTAATTCTAGTTTTAGCCGTAATTTTTTTTAATCTTTTTTAAGGAAATATAATTACTGGGTGATTAAGGATTAAAGTGGGTAATTAAATGATTAATCCATCTAATTAGTGGGTGGTTTGATTATGCAGTGGGCACATTATCCTCACATCCGTTGTGGGCAGAAGGTGGATGGAAACAAGCAAACAAAATAAGCTTGAATTTGACCGGAGATCATCACAGTCCATCCGATTAGCCAATGGGGTTCCGCCACCTGTTAATTCTAGAGATGATGATGACGTGTCAATAGATTAAATACTAAATAAAACATCTTTTTTTGTTTTTTTTTTTAATTAATGTGTATTAATTTAGATTTTATTATTTCCAACAAAAATTGAGGTTGACTAAGTCCTCCTGCCCTGACCCTATAGGAAAATAAATTACTTTGATAACCTCACCCCCCCCCCCCCCCCNCGTGTGATGTAATAACAGGTGAGATTAATGTTATTACATATTTATAATCTATTTATCAAGTCAGTTCTGTCTTGAAATTGATTGACTTTTAAGA ATGGCACCAGAGAAGAAACAGCGTGTTCCTTCAGCATATAATAGGTTCATCAAAGAGGAAATCCAAAGGATTAAGGCGAACAATCCCGACATTAGCCACAGAGAAGCCTTTAGCACCGCCGCTAAAAATGTAAGTTCTCGAACCTCTTGCTCTTGCTCGAAACTAAGTTCCGAGTTTAAAGCTTTTGAGACATATATAGAAAGTGGGCACATTATCCTCACATCCGTTGTGGGCAGAAGGTGGATGGAAACAAGCAAACAAAATAAGCTTGAATTTGACCGGAGATCATCACAGTCCATCCGATTAGCCAATGGGGTTCCGCCACCTGTTAATTCTAGAGATGATGATGACGTGTCAATAGATTAAATACTAAATAAAACATCTTTTTTTGTTTTTTTTTTTAATTAATGTGTATTAATTTAGATTTTATTATTTCCAACAAAAATTGAGGTTGACTAAGTCCTCCTGCCCTGACCCTATAGGAAAATAAATTACTTTGATAACCTCACCCCCCCCCCCCCCCCNCGTGTGATGTAATAACAGGTGAGATTAATGTTATTACATATTTATAATCTATTTATCAAGTCAGTTCTGTCTTGAAATTGATTGACTTTTAAGA ATGGCACCAGAGAAGAAACAGCGTGTTCCTTCAGCATATAATAGGTTCATCAAAGAGGAAATCCAAAGGATTAAGGCGAACAATCCCGACATTAGCCACAGAGAAGCCTTTAGCACCGCCGCTAAAAATGTAAGTTCTCGAACCTCTTGCTCTTGCTCGAAACTAAGTTCCGAGTTTAAAGCTTTTGAGACATATATAGAAAGTGGGCACATTATCCTCACATCCGTTGTGGGCAGAAGGTGGATGGAAACAAGCAAACAAAATAAGCTTGAATTTGACCGGAGATCATCACAGTCCATCCGATTAGCCAATGGGGTTCCGCCACCTGTTAATTCTAGAGATGATGATGACGTGTCAATAGATTAA MAPEKKQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNVSSRTSCSCSKLSSEFKAFETYIESGHIILTSVVGRRWMETSKQNKLEFDRRSSQSIRLANGVPPPVNSRDDDDVSID Homology
BLAST of Cp4.1LG16g08320 vs. ExPASy Swiss-Prot
Match: Q10FZ7 (Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.5e-14 Identity = 39/41 (95.12%), Postives = 41/41 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g08320 vs. ExPASy Swiss-Prot
Match: Q8GW46 (Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.5e-14 Identity = 39/41 (95.12%), Postives = 41/41 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g08320 vs. ExPASy Swiss-Prot
Match: Q2QM17 (Protein YABBY 6 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB6 PE=2 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.5e-14 Identity = 39/41 (95.12%), Postives = 41/41 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g08320 vs. ExPASy Swiss-Prot
Match: O22152 (Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.6e-13 Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = 0
BLAST of Cp4.1LG16g08320 vs. ExPASy Swiss-Prot
Match: Q9XFB1 (Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.6e-13 Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = 0
BLAST of Cp4.1LG16g08320 vs. NCBI nr
Match: XP_022986993.1 (putative axial regulator YABBY 2 isoform X4 [Cucurbita maxima]) HSP 1 Score: 105 bits (262), Expect = 4.58e-26 Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of Cp4.1LG16g08320 vs. NCBI nr
Match: XP_022986989.1 (putative axial regulator YABBY 2 isoform X1 [Cucurbita maxima]) HSP 1 Score: 105 bits (262), Expect = 8.46e-26 Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of Cp4.1LG16g08320 vs. NCBI nr
Match: XP_022986992.1 (putative axial regulator YABBY 2 isoform X3 [Cucurbita maxima]) HSP 1 Score: 101 bits (252), Expect = 2.57e-24 Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of Cp4.1LG16g08320 vs. NCBI nr
Match: PPR92799.1 (hypothetical protein GOBAR_AA27871 [Gossypium barbadense]) HSP 1 Score: 88.2 bits (217), Expect = 4.86e-19 Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 0
BLAST of Cp4.1LG16g08320 vs. NCBI nr
Match: XP_016579963.1 (PREDICTED: axial regulator YABBY 5-like isoform X4 [Capsicum annuum]) HSP 1 Score: 85.5 bits (210), Expect = 2.77e-18 Identity = 49/88 (55.68%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of Cp4.1LG16g08320 vs. ExPASy TrEMBL
Match: A0A6J1JI62 (putative axial regulator YABBY 2 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111484576 PE=3 SV=1) HSP 1 Score: 105 bits (262), Expect = 2.22e-26 Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of Cp4.1LG16g08320 vs. ExPASy TrEMBL
Match: A0A6J1JHL4 (putative axial regulator YABBY 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484576 PE=3 SV=1) HSP 1 Score: 105 bits (262), Expect = 4.09e-26 Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of Cp4.1LG16g08320 vs. ExPASy TrEMBL
Match: A0A6J1J940 (putative axial regulator YABBY 2 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111484576 PE=3 SV=1) HSP 1 Score: 101 bits (252), Expect = 1.25e-24 Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of Cp4.1LG16g08320 vs. ExPASy TrEMBL
Match: A0A2P5WNX6 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA27871 PE=3 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 2.35e-19 Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 0
BLAST of Cp4.1LG16g08320 vs. ExPASy TrEMBL
Match: A0A1U8HFM6 (axial regulator YABBY 5-like isoform X4 OS=Capsicum annuum OX=4072 GN=LOC107877768 PE=3 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.34e-18 Identity = 49/88 (55.68%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of Cp4.1LG16g08320 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein ) HSP 1 Score: 79.7 bits (195), Expect = 1.8e-15 Identity = 39/41 (95.12%), Postives = 41/41 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g08320 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein ) HSP 1 Score: 79.7 bits (195), Expect = 1.8e-15 Identity = 39/41 (95.12%), Postives = 41/41 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g08320 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein ) HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14 Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = 0
BLAST of Cp4.1LG16g08320 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein ) HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14 Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = 0
BLAST of Cp4.1LG16g08320 vs. TAIR 10
Match: AT4G00180.2 (Plant-specific transcription factor YABBY family protein ) HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14 Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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