Cp4.1LG16g07520 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g07520
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Small ubiquitin-related modifier
Location	Cp4.1LG16: 7539770 .. 7541280 (+)
RNA-Seq Expression	Cp4.1LG16g07520
Synteny	Cp4.1LG16g07520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGGGTCACAAACACGCAGCAGGAGGAAGACAAGAAGCCTAACGATCAATCGGCGCATATCAATCTGAAGGTCAAAGGCCAGGTTGGTTTCCTTCTCGAGAAATTAAGTTTATGCTTGAAGGTTTTAATGCTGCTGATATTTCTCTCATATGTTCGTAGTCTCTTGATGTTTTCTGGCTTTTTCCTTCTCTTTTCTCGCTCTTTCTACTATCGAATTGCTTTTGGGTGTTACCGAAAGTTGAATCCCGAAAATGGAACTTTTTTTGTTCATCTTTCCCTCTCAGAATCTAGCAAAAGTCAATTAAGTGATAGATGGAATTGTAGTTTCCATTTTTTGTGTAATAGTTAACAAAATTCATGTCATAGCTTTGATTGATCTTTTTGGCAAAGACTTCGTAGCTGCATGCTGTTATAAACTACTATCTGGGATACTGGGAGTGAATTTTACATAGCCGCTGGTCTTCCTGTCCTGTCCTAGATAAGCTAGTGATTTTTTGATATTCTTCTAATATACTTTTCATTGGGATGGACTCATCACTTGTGCATCGAATATCTGCTCGATTGTTGCCTTGCTGAGCATTGGCTGCACATTTACATTTTTGATCTTTCAAACTGCACTGTTGGGATATTTATCTATGCATGAGTACTAAAGCATTTGTGGGGTTCCTTTAAGCTTCAATGAGTTGGAGTTTCTCAAAATTCTTTCACTCTATGGTCTCCGTTGTGAGTAATGGTACAAATTATAGTGATTTGATTGGAGGACCGGTTTAATCTATCTATTGAGTTAATTTCTCAGTTTCTTTTCTGTTCTTTGTTTCACTTCAGCTTGTACTGTTTCCTTTCTCCTTCATTCTTCTTTATCAAGTTGATTATTACATCAATTCGTTCTTAATCAATTTTTGTTAGAAATATTTTTCTTGATCTTCCTATAGTGGGATGGATTCCTTGTTGCATTGTTTCACTTTTCTCCATAAAAGTTAATTTTTTGTACCAAAGAAGTATGTTCTGAATCTTTGATTTCCTATAGGATGGGAACGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTCGATGGTCGTCGTCTTCGAGCAGAGCAGACCCCGGACGAGGTATCCCTTTCTCTAATCTAAGCACAATTAGATACCCTAGTATGGAATTTCATGAATTTTTAGTAAAATCATGTAATTTTTCCCAGCTAGAGATGGAGGATGGGGATGAGATCGATGCAATGTTGCACCAAACAGGTGGATCGAGTGGTTGATATGGGATACGTGGTCCTTTAGTATCTGTATTCTGATTGAAAAAGGAAAATGTGGGTCATTTAGATTCTTGCAGGTGGTTTATATTAGGTGTAGATTCTGGAAAGACTTCCCAAAGTTTATGCTTTATGTTGTGGCTTGGCTCGTTGTATGGATTGAACGCTCTGCTTATTTGCTAA

mRNA sequence

ATGTCGGGGGAGGAAGACAAGAAGCCTAACGATCAATCGGCGCATATCAATCTGAAGGTCAAAGGCCAGGATGGGAACGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTCGATGGTCGTCGTCTTCGAGCAGAGCAGACCCCGGACGAGCTAGAGATGGAGGATGGGGATGAGATCGATGCAATGTTGCACCAAACAGGTGTAGATTCTGGAAAGACTTCCCAAAGTTTATGCTTTATGTTGTGGCTTGGCTCGTTGTATGGATTGAACGCTCTGCTTATTTGCTAA

Coding sequence (CDS)

ATGTCGGGGGAGGAAGACAAGAAGCCTAACGATCAATCGGCGCATATCAATCTGAAGGTCAAAGGCCAGGATGGGAACGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTCGATGGTCGTCGTCTTCGAGCAGAGCAGACCCCGGACGAGCTAGAGATGGAGGATGGGGATGAGATCGATGCAATGTTGCACCAAACAGGTGTAGATTCTGGAAAGACTTCCCAAAGTTTATGCTTTATGTTGTGGCTTGGCTCGTTGTATGGATTGAACGCTCTGCTTATTTGCTAA

Protein sequence

MSGEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGVDSGKTSQSLCFMLWLGSLYGLNALLIC

Homology

[Close]

BLAST of Cp4.1LG16g07520 vs. ExPASy Swiss-Prot
Match: P55852 (Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2)

HSP 1 Score: 169.1 bits (427), Expect = 3.0e-41
Identity = 83/91 (91.21%), Postives = 85/91 (93.41%), Query Frame = 0


Query: 4  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 63
          EEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGR
Sbjct: 6  EEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFDGR 65

Query: 64 RLRAEQTPDELEMEDGDEIDAMLHQTGVDSG 95
          RLRAEQTPDEL+MEDGDEIDAMLHQTG   G
Sbjct: 66 RLRAEQTPDELDMEDGDEIDAMLHQTGGSGG 96

[Close]

BLAST of Cp4.1LG16g07520 vs. ExPASy Swiss-Prot
Match: Q9FLP6 (Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 3.9e-41
Identity = 86/99 (86.87%), Postives = 88/99 (88.89%), Query Frame = 0


Query: 4   EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 63
           EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGR
Sbjct: 6   EEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGR 65

Query: 64  RLRAEQTPDELEMEDGDEIDAMLHQTGVDSGKTSQSLCF 103
           RLRAEQTPDELEMEDGDEIDAMLHQTG  +    +  CF
Sbjct: 66  RLRAEQTPDELEMEDGDEIDAMLHQTGGGAKNGLKLFCF 103

[Close]

BLAST of Cp4.1LG16g07520 vs. ExPASy Swiss-Prot
Match: P55857 (Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SUMO1 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-38
Identity = 81/92 (88.04%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 2  SGEEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAF 61
          +GEEDKKP       AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAF
Sbjct: 4  AGEEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAF 63

Query: 62 LFDGRRLRAEQTPDELEMEDGDEIDAMLHQTG 91
          LFDGRRLR EQTPDELEMEDGDEIDAMLHQTG
Sbjct: 64 LFDGRRLRGEQTPDELEMEDGDEIDAMLHQTG 95

[Close]

BLAST of Cp4.1LG16g07520 vs. ExPASy Swiss-Prot
Match: O13351 (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pmt3 PE=1 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 5.4e-22
Identity = 50/89 (56.18%), Postives = 67/89 (75.28%), Query Frame = 0


Query: 2   SGEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFD 61
           + ++D KP+ +  HINLKV GQD NEVFF+IK++T+  KLM  YC RQ   +NS+ FL D
Sbjct: 24  TSQQDVKPSTE--HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRFLVD 83

Query: 62  GRRLRAEQTPDELEMEDGDEIDAMLHQTG 91
           G R+R +QTP EL+MEDGD+I+A+L Q G
Sbjct: 84  GERIRPDQTPAELDMEDGDQIEAVLEQLG 110

[Close]

BLAST of Cp4.1LG16g07520 vs. ExPASy Swiss-Prot
Match: Q9FLP5 (Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 6.6e-20
Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = 0


Query: 1  MSGEEDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAF 60
          MS  +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF
Sbjct: 1  MSNPQDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAF 60

Query: 61 LFDGRRLRAEQTPDELEMEDGDEIDAMLHQTG 91
          +F+G R+   +TPDEL+MEDGD IDA    +G
Sbjct: 61 IFNGARIGGLETPDELDMEDGDVIDACRAMSG 92

[Close]

BLAST of Cp4.1LG16g07520 vs. NCBI nr
Match: KAE9614939.1 (putative Ubiquitin domain, Rad60/SUMO-like domain-containing protein [Lupinus albus] >KAF1868757.1 hypothetical protein Lal_00036195 [Lupinus albus])

HSP 1 Score: 176 bits (445), Expect = 1.05e-54
Identity = 88/90 (97.78%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MSGEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLF 60
          MSGEEDKKPND SAHINLKVKGQDGNEVFFRIKR+TQLKKLMNAYCDRQSVDLNSIAFLF
Sbjct: 1  MSGEEDKKPNDTSAHINLKVKGQDGNEVFFRIKRNTQLKKLMNAYCDRQSVDLNSIAFLF 60

Query: 61 DGRRLRAEQTPDELEMEDGDEIDAMLHQTG 90
          DGRRLRAEQTPDELEMEDGDEIDAMLHQTG
Sbjct: 61 DGRRLRAEQTPDELEMEDGDEIDAMLHQTG 90

[Close]

BLAST of Cp4.1LG16g07520 vs. NCBI nr
Match: XP_022943304.1 (small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022944672.1 small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022986048.1 small ubiquitin-related modifier 1 [Cucurbita maxima] >XP_023512038.1 small ubiquitin-related modifier 1 [Cucurbita pepo subsp. pepo] >XP_023513384.1 small ubiquitin-related modifier 1 [Cucurbita pepo subsp. pepo] >KAG6570547.1 Small ubiquitin-related modifier 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010405.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma] >KAG7010406.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 176 bits (445), Expect = 1.22e-54
Identity = 89/91 (97.80%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 4   EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 63
           EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR
Sbjct: 10  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69

Query: 64  RLRAEQTPDELEMEDGDEIDAMLHQTGVDSG 94
           RLRAEQTPDELEMEDGDEIDAMLHQTG  SG
Sbjct: 70  RLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100

[Close]

BLAST of Cp4.1LG16g07520 vs. NCBI nr
Match: XP_022986050.1 (small ubiquitin-related modifier 1-like [Cucurbita maxima])

HSP 1 Score: 176 bits (445), Expect = 1.22e-54
Identity = 89/91 (97.80%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 4   EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 63
           EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR
Sbjct: 10  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69

Query: 64  RLRAEQTPDELEMEDGDEIDAMLHQTGVDSG 94
           RLRAEQTPDELEMEDGDEIDAMLHQTG  SG
Sbjct: 70  RLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100

[Close]

BLAST of Cp4.1LG16g07520 vs. NCBI nr
Match: XP_022970791.1 (small ubiquitin-related modifier 1-like [Cucurbita maxima] >XP_023533825.1 small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo] >KAG6604755.1 Small ubiquitin-related modifier 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034883.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 174 bits (440), Expect = 9.08e-54
Identity = 90/98 (91.84%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 4   EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 63
           EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR
Sbjct: 10  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69

Query: 64  RLRAEQTPDELEMEDGDEIDAMLHQTGVDSGKTSQSLC 101
           RLRAEQTPDELEMEDGDEIDAMLHQTG   G T  + C
Sbjct: 70  RLRAEQTPDELEMEDGDEIDAMLHQTG---GSTLWNTC 104

[Close]

BLAST of Cp4.1LG16g07520 vs. NCBI nr
Match: XP_022947043.1 (small ubiquitin-related modifier 1-like [Cucurbita moschata])

HSP 1 Score: 174 bits (440), Expect = 9.08e-54
Identity = 90/98 (91.84%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 4   EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 63
           EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR
Sbjct: 10  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69

Query: 64  RLRAEQTPDELEMEDGDEIDAMLHQTGVDSGKTSQSLC 101
           RLRAEQTPDELEMEDGDEIDAMLHQTG   G T  + C
Sbjct: 70  RLRAEQTPDELEMEDGDEIDAMLHQTG---GSTLWNTC 104

[Close]

BLAST of Cp4.1LG16g07520 vs. ExPASy TrEMBL
Match: A0A6A4QMU5 (Small ubiquitin-related modifier OS=Lupinus albus OX=3870 GN=Lal_00036195 PE=3 SV=1)

HSP 1 Score: 176 bits (445), Expect = 5.07e-55
Identity = 88/90 (97.78%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MSGEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLF 60
          MSGEEDKKPND SAHINLKVKGQDGNEVFFRIKR+TQLKKLMNAYCDRQSVDLNSIAFLF
Sbjct: 1  MSGEEDKKPNDTSAHINLKVKGQDGNEVFFRIKRNTQLKKLMNAYCDRQSVDLNSIAFLF 60

Query: 61 DGRRLRAEQTPDELEMEDGDEIDAMLHQTG 90
          DGRRLRAEQTPDELEMEDGDEIDAMLHQTG
Sbjct: 61 DGRRLRAEQTPDELEMEDGDEIDAMLHQTG 90

[Close]

BLAST of Cp4.1LG16g07520 vs. ExPASy TrEMBL
Match: A0A6J1FTW7 (Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 PE=3 SV=1)

HSP 1 Score: 176 bits (445), Expect = 5.92e-55
Identity = 89/91 (97.80%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 4   EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 63
           EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR
Sbjct: 10  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69

Query: 64  RLRAEQTPDELEMEDGDEIDAMLHQTGVDSG 94
           RLRAEQTPDELEMEDGDEIDAMLHQTG  SG
Sbjct: 70  RLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100

[Close]

BLAST of Cp4.1LG16g07520 vs. ExPASy TrEMBL
Match: A0A6J1JCZ0 (Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483905 PE=3 SV=1)

HSP 1 Score: 176 bits (445), Expect = 5.92e-55
Identity = 89/91 (97.80%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 4   EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 63
           EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR
Sbjct: 10  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69

Query: 64  RLRAEQTPDELEMEDGDEIDAMLHQTGVDSG 94
           RLRAEQTPDELEMEDGDEIDAMLHQTG  SG
Sbjct: 70  RLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100

[Close]

BLAST of Cp4.1LG16g07520 vs. ExPASy TrEMBL
Match: A0A6J1JFC9 (Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483904 PE=3 SV=1)

HSP 1 Score: 176 bits (445), Expect = 5.92e-55
Identity = 89/91 (97.80%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 4   EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 63
           EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR
Sbjct: 10  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69

Query: 64  RLRAEQTPDELEMEDGDEIDAMLHQTGVDSG 94
           RLRAEQTPDELEMEDGDEIDAMLHQTG  SG
Sbjct: 70  RLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100

[Close]

BLAST of Cp4.1LG16g07520 vs. ExPASy TrEMBL
Match: A0A6J1I1J4 (Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111469669 PE=3 SV=1)

HSP 1 Score: 174 bits (440), Expect = 4.40e-54
Identity = 90/98 (91.84%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 4   EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 63
           EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR
Sbjct: 10  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69

Query: 64  RLRAEQTPDELEMEDGDEIDAMLHQTGVDSGKTSQSLC 101
           RLRAEQTPDELEMEDGDEIDAMLHQTG   G T  + C
Sbjct: 70  RLRAEQTPDELEMEDGDEIDAMLHQTG---GSTLWNTC 104

[Close]

BLAST of Cp4.1LG16g07520 vs. TAIR 10
Match: AT4G26840.1 (small ubiquitin-like modifier 1 )

HSP 1 Score: 169.1 bits (427), Expect = 2.1e-42
Identity = 83/91 (91.21%), Postives = 85/91 (93.41%), Query Frame = 0


Query: 4  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 63
          EEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGR
Sbjct: 6  EEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFDGR 65

Query: 64 RLRAEQTPDELEMEDGDEIDAMLHQTGVDSG 95
          RLRAEQTPDEL+MEDGDEIDAMLHQTG   G
Sbjct: 66 RLRAEQTPDELDMEDGDEIDAMLHQTGGSGG 96

[Close]

BLAST of Cp4.1LG16g07520 vs. TAIR 10
Match: AT5G55160.1 (small ubiquitin-like modifier 2 )

HSP 1 Score: 168.7 bits (426), Expect = 2.8e-42
Identity = 86/99 (86.87%), Postives = 88/99 (88.89%), Query Frame = 0


Query: 4   EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 63
           EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGR
Sbjct: 6   EEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGR 65

Query: 64  RLRAEQTPDELEMEDGDEIDAMLHQTGVDSGKTSQSLCF 103
           RLRAEQTPDELEMEDGDEIDAMLHQTG  +    +  CF
Sbjct: 66  RLRAEQTPDELEMEDGDEIDAMLHQTGGGAKNGLKLFCF 103

[Close]

BLAST of Cp4.1LG16g07520 vs. TAIR 10
Match: AT5G55160.2 (small ubiquitin-like modifier 2 )

HSP 1 Score: 159.5 bits (402), Expect = 1.7e-39
Identity = 86/112 (76.79%), Postives = 88/112 (78.57%), Query Frame = 0


Query: 4   EEDKKPNDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQS 63
           EEDKKP DQ AHINLKVKGQ             DGNEVFFRIKRSTQLKKLMNAYCDRQS
Sbjct: 6   EEDKKP-DQGAHINLKVKGQAFFVVGTWLVIDTDGNEVFFRIKRSTQLKKLMNAYCDRQS 65

Query: 64  VDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGVDSGKTSQSLCF 103
           VD NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTG  +    +  CF
Sbjct: 66  VDFNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGGAKNGLKLFCF 116

[Close]

BLAST of Cp4.1LG16g07520 vs. TAIR 10
Match: AT5G55170.1 (small ubiquitin-like modifier 3 )

HSP 1 Score: 98.2 bits (243), Expect = 4.7e-21
Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = 0


Query: 1  MSGEEDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAF 60
          MS  +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF
Sbjct: 1  MSNPQDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAF 60

Query: 61 LFDGRRLRAEQTPDELEMEDGDEIDAMLHQTG 91
          +F+G R+   +TPDEL+MEDGD IDA    +G
Sbjct: 61 IFNGARIGGLETPDELDMEDGDVIDACRAMSG 92

[Close]

BLAST of Cp4.1LG16g07520 vs. TAIR 10
Match: AT5G55856.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 4.4e-19
Identity = 44/85 (51.76%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 6  DKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRL 65
          DKKP   S+HI +KVK QD   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R+
Sbjct: 5  DKKPLIPSSHITVKVKNQDDICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRI 64

Query: 66 RAEQTPDELEMEDGDEIDAMLHQTG 91
          +  QTP+EL +ED DEI+A   Q G
Sbjct: 65 KLNQTPNELGLEDEDEIEAFGEQLG 89

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g07520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P55852	3.0e-41	91.21	Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1...	[more]
Q9FLP6	3.9e-41	86.87	Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1...	[more]
P55857	1.1e-38	88.04	Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
O13351	5.4e-22	56.18	Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q9FLP5	6.6e-20	54.35	Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1...	[more]

BLAST of Cp4.1LG16g07520 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE9614939.1	1.05e-54	97.78	putative Ubiquitin domain, Rad60/SUMO-like domain-containing protein [Lupinus al...	[more]
XP_022943304.1	1.22e-54	97.80	small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022944672.1 small ub...	[more]
XP_022986050.1	1.22e-54	97.80	small ubiquitin-related modifier 1-like [Cucurbita maxima]	[more]
XP_022970791.1	9.08e-54	91.84	small ubiquitin-related modifier 1-like [Cucurbita maxima] >XP_023533825.1 small...	[more]
XP_022947043.1	9.08e-54	91.84	small ubiquitin-related modifier 1-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG16g07520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A4QMU5	5.07e-55	97.78	Small ubiquitin-related modifier OS=Lupinus albus OX=3870 GN=Lal_00036195 PE=3 S...	[more]
A0A6J1FTW7	5.92e-55	97.80	Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 P...	[more]
A0A6J1JCZ0	5.92e-55	97.80	Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483905 PE=...	[more]
A0A6J1JFC9	5.92e-55	97.80	Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483904 PE=...	[more]
A0A6J1I1J4	4.40e-54	91.84	Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111469669 PE=...	[more]

BLAST of Cp4.1LG16g07520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26840.1	2.1e-42	91.21	small ubiquitin-like modifier 1	[more]
AT5G55160.1	2.8e-42	86.87	small ubiquitin-like modifier 2	[more]
AT5G55160.2	1.7e-39	76.79	small ubiquitin-like modifier 2	[more]
AT5G55170.1	4.7e-21	54.35	small ubiquitin-like modifier 3	[more]
AT5G55856.1	4.4e-19	51.76	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 16..87 e-value: 2.5E-14 score: 63.6
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 14..91 score: 14.490739
IPR022617	Rad60/SUMO-like domain	PFAM	PF11976	Rad60-SLD	coord: 16..86 e-value: 8.8E-25 score: 86.3
None	No IPR available	GENE3D	3.10.20.90		coord: 1..90 e-value: 1.4E-38 score: 133.6
None	No IPR available	PANTHER	PTHR10562	SMALL UBIQUITIN-RELATED MODIFIER	coord: 3..90
None	No IPR available	PANTHER	PTHR10562:SF87	SMALL UBIQUITIN-RELATED MODIFIER	coord: 3..90
None	No IPR available	CDD	cd16116	Ubl_Smt3_like	coord: 14..87 e-value: 6.84203E-50 score: 151.227
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 6..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g07520.1	Cp4.1LG16g07520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016925	protein sumoylation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0031386	protein tag
molecular_function	GO:0044389	ubiquitin-like protein ligase binding
molecular_function	GO:0005515	protein binding