Cp4.1LG16g07370 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGTTTCAAGACGACTGGCCCTTCTCTCCCTCGGAACAATCCTTCTGTGCCTCTTGTTCGCTAGAGCCGCCATCGCCGAGTCCGACTACGGCGACGACATTCACGCCGTCAGGCATTCCTCCGCTTCCGACAACTGCAATCGCGAGCAACCCTACAAAGGCGACCAATGCAGGGAAGAAAACGACGGCGTAGAGGATGAAGATTTTGATGACACCTACAAGATCGTCAATAACGTCGCCATAAGGTTATCGGCGTCCGGAAGCAAACTTCGTGAGGCGGAGGAAGAGGACGATCTGCCGGTGCCCGAGGAAGAGATCCGCAATCTATCGATAGTGGGGCACTGA ATGGCAGTTTCAAGACGACTGGCCCTTCTCTCCCTCGGAACAATCCTTCTGTGCCTCTTGTTCGCTAGAGCCGCCATCGCCGAGTCCGACTACGGCGACGACATTCACGCCGTCAGGCATTCCTCCGCTTCCGACAACTGCAATCGCGAGCAACCCTACAAAGGCGACCAATGCAGGGAAGAAAACGACGGCGTAGAGGATGAAGATTTTGATGACACCTACAAGATCGTCAATAACGTCGCCATAAGGTTATCGGCGTCCGGAAGCAAACTTCGTGAGGCGGAGGAAGAGGACGATCTGCCGGTGCCCGAGGAAGAGATCCGCAATCTATCGATAGTGGGGCACTGA ATGGCAGTTTCAAGACGACTGGCCCTTCTCTCCCTCGGAACAATCCTTCTGTGCCTCTTGTTCGCTAGAGCCGCCATCGCCGAGTCCGACTACGGCGACGACATTCACGCCGTCAGGCATTCCTCCGCTTCCGACAACTGCAATCGCGAGCAACCCTACAAAGGCGACCAATGCAGGGAAGAAAACGACGGCGTAGAGGATGAAGATTTTGATGACACCTACAAGATCGTCAATAACGTCGCCATAAGGTTATCGGCGTCCGGAAGCAAACTTCGTGAGGCGGAGGAAGAGGACGATCTGCCGGTGCCCGAGGAAGAGATCCGCAATCTATCGATAGTGGGGCACTGA MAVSRRLALLSLGTILLCLLFARAAIAESDYGDDIHAVRHSSASDNCNREQPYKGDQCREENDGVEDEDFDDTYKIVNNVAIRLSASGSKLREAEEEDDLPVPEEEIRNLSIVGH Homology
BLAST of Cp4.1LG16g07370 vs. NCBI nr
Match: KAG6570557.1 (hypothetical protein SDJN03_29472, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 215 bits (548), Expect = 3.41e-70 Identity = 112/115 (97.39%), Postives = 112/115 (97.39%), Query Frame = 0
BLAST of Cp4.1LG16g07370 vs. NCBI nr
Match: KAA0054503.1 (hypothetical protein E6C27_scaffold24G002830 [Cucumis melo var. makuwa] >TYK14536.1 hypothetical protein E5676_scaffold552G00150 [Cucumis melo var. makuwa]) HSP 1 Score: 139 bits (350), Expect = 5.46e-40 Identity = 79/117 (67.52%), Postives = 91/117 (77.78%), Query Frame = 0
BLAST of Cp4.1LG16g07370 vs. NCBI nr
Match: KAE8646929.1 (hypothetical protein Csa_021071 [Cucumis sativus]) HSP 1 Score: 120 bits (302), Expect = 5.54e-29 Identity = 71/115 (61.74%), Postives = 84/115 (73.04%), Query Frame = 0
BLAST of Cp4.1LG16g07370 vs. NCBI nr
Match: KAG6604744.1 (hypothetical protein SDJN03_02061, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 107 bits (266), Expect = 1.52e-27 Identity = 60/93 (64.52%), Postives = 73/93 (78.49%), Query Frame = 0
BLAST of Cp4.1LG16g07370 vs. NCBI nr
Match: KAB1208768.1 (hypothetical protein CJ030_MR6G024804 [Morella rubra]) HSP 1 Score: 72.0 bits (175), Expect = 1.77e-13 Identity = 46/117 (39.32%), Postives = 70/117 (59.83%), Query Frame = 0
BLAST of Cp4.1LG16g07370 vs. ExPASy TrEMBL
Match: A0A5D3CVV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00150 PE=4 SV=1) HSP 1 Score: 139 bits (350), Expect = 2.64e-40 Identity = 79/117 (67.52%), Postives = 91/117 (77.78%), Query Frame = 0
BLAST of Cp4.1LG16g07370 vs. ExPASy TrEMBL
Match: A0A0A0KGZ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G169270 PE=4 SV=1) HSP 1 Score: 128 bits (321), Expect = 7.04e-36 Identity = 74/118 (62.71%), Postives = 87/118 (73.73%), Query Frame = 0
BLAST of Cp4.1LG16g07370 vs. ExPASy TrEMBL
Match: A0A2N9FLD3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15974 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 5.23e-16 Identity = 51/121 (42.15%), Postives = 73/121 (60.33%), Query Frame = 0
BLAST of Cp4.1LG16g07370 vs. ExPASy TrEMBL
Match: A0A6A1VA77 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR6G024804 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 8.59e-14 Identity = 46/117 (39.32%), Postives = 70/117 (59.83%), Query Frame = 0
BLAST of Cp4.1LG16g07370 vs. ExPASy TrEMBL
Match: A0A498J3I4 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_032407 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 4.18e-12 Identity = 50/120 (41.67%), Postives = 68/120 (56.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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