Cp4.1LG16g07360 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTATTCTTGGAGCTATGGCTAAACATTTGTATACAATAATTGGGTACAAACTAATCTTTTGGGGGAATGTCTCTCTTAACTTTCAAAACCCAAATATCTTGTTGTTTTATGTCATTGTTTATCATTACCTTGCTTGACAAATTTAGGCTTCTCCTTGATCCAGGCCTGGCGTGATGCTTTTTTTTCCCTTGTAAGTGCACATAAGCCATTTGCATTTAAATCTTGTGTCCTTTTTCATGGCTGCAAGAGATGATTCATAAAAGGTTAATGCATATGAATGAACAGATATGCATCAATTAGAGCAATTGAGAGTCCTTCAAGTCTTGATGACCGACAATGGTTGAGTTATTGGGTTATATACTCCCTCATAACCCTCTTCGAACTAACATTTTGGAGAATCCTGGTTTGGTATAATTCTAGTACTTAATACACAAAACTATTCTTTGAGGCTCTTCTTCTTCTTCTTCTTCTTCAAGTCTACATTTTAAAGGCTATGGGATGGCATGCAGGATTCCACTTTGGGGATACATTAAGCTCGTGGCTTGTTTATGGTTGGTTCTACCAATTTTCAATGGGTCAGCCTATATCTACGAGAATATAGTGAGGAAATATGTTAAGATTGGGGGATATGTGAATCCAAACTATCCAGAGAATCAAAAGAAAGTTCTCCAGATGATGACTCTGGATTCTAGGAAATCAGCGGAGCGTTATATCGATAGATATGGACCCGATGCATTTGAACGAGTTGTCAAAGCTGTAAGCTGCCTCTATTTATATTCAAATTGATGCTATAATACTTAAAGATATCTATGATGTTAATCCTGTTAGACTTGATTTTGTAGGCTGAAAAAGAAGCAAAGAAACACTGAGAAGAAATCCTTCTACGATGAAGTTGAAGAAAAATGGATGATTTAATATTTACAAGGCTTGAGTAATGGTTGGGCTCTACTAATACGATTTCATGTTGTGTGCTTGTATATTGTGTATTCTGCACAAGAGGGAAAACAATCAAGGGTGCTTGGTTTTTCTGTGGATAAGAACTGTAAAAAAACGAGTTCCTACCGAACAATAATGTTCTCCTAAATTCCAGGAAATCAATTGAGACAAGTAAATCCTATATTCTTTTTCCCACAAAGTTAATAAAGGATGGTCTAATTAAAATAAAGAAGCAGAGATGATATGAGGAAACCAGTTGAGACAGCCTAGTCTATCTCAT ATGGGTATTCTTGGAGCTATGGCTAAACATTTGTATACAATAATTGGGCCTGGCGTGATGCTTTTTTTTCCCTTATATGCATCAATTAGAGCAATTGAGAGTCCTTCAAGTCTTGATGACCGACAATGGTTGAGTTATTGGGTTATATACTCCCTCATAACCCTCTTCGAACTAACATTTTGGAGAATCCTGGTTTGGATTCCACTTTGGGGATACATTAAGCTCGTGGCTTGTTTATGGTTGGTTCTACCAATTTTCAATGGGTCAGCCTATATCTACGAGAATATAGTGAGGAAATATGTTAAGATTGGGGGATATGTGAATCCAAACTATCCAGAGAATCAAAAGAAAGTTCTCCAGATGATGACTCTGGATTCTAGGAAATCAGCGGAGCGTTATATCGATAGATATGGACCCGATGCATTTGAACGAGTTGTCAAAGCTGCTGAAAAAGAAGCAAAGAAACACTGAGAAGAAATCCTTCTACGATGAAGTTGAAGAAAAATGGATGATTTAATATTTACAAGGCTTGAGTAATGGTTGGGCTCTACTAATACGATTTCATGTTGTGTGCTTGTATATTGTGTATTCTGCACAAGAGGGAAAACAATCAAGGGTGCTTGGTTTTTCTGTGGATAAGAACTGTAAAAAAACGAGTTCCTACCGAACAATAATGTTCTCCTAAATTCCAGGAAATCAATTGAGACAAGTAAATCCTATATTCTTTTTCCCACAAAGTTAATAAAGGATGGTCTAATTAAAATAAAGAAGCAGAGATGATATGAGGAAACCAGTTGAGACAGCCTAGTCTATCTCAT ATGGGTATTCTTGGAGCTATGGCTAAACATTTGTATACAATAATTGGGCCTGGCGTGATGCTTTTTTTTCCCTTATATGCATCAATTAGAGCAATTGAGAGTCCTTCAAGTCTTGATGACCGACAATGGTTGAGTTATTGGGTTATATACTCCCTCATAACCCTCTTCGAACTAACATTTTGGAGAATCCTGGTTTGGATTCCACTTTGGGGATACATTAAGCTCGTGGCTTGTTTATGGTTGGTTCTACCAATTTTCAATGGGTCAGCCTATATCTACGAGAATATAGTGAGGAAATATGTTAAGATTGGGGGATATGTGAATCCAAACTATCCAGAGAATCAAAAGAAAGTTCTCCAGATGATGACTCTGGATTCTAGGAAATCAGCGGAGCGTTATATCGATAGATATGGACCCGATGCATTTGAACGAGTTGTCAAAGCTGCTGAAAAAGAAGCAAAGAAACACTGA MGILGAMAKHLYTIIGPGVMLFFPLYASIRAIESPSSLDDRQWLSYWVIYSLITLFELTFWRILVWIPLWGYIKLVACLWLVLPIFNGSAYIYENIVRKYVKIGGYVNPNYPENQKKVLQMMTLDSRKSAERYIDRYGPDAFERVVKAAEKEAKKH Homology
BLAST of Cp4.1LG16g07360 vs. ExPASy Swiss-Prot
Match: Q682H0 (HVA22-like protein f OS=Arabidopsis thaliana OX=3702 GN=HVA22F PE=2 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 7.8e-53 Identity = 96/158 (60.76%), Postives = 128/158 (81.01%), Query Frame = 0
BLAST of Cp4.1LG16g07360 vs. ExPASy Swiss-Prot
Match: Q9S7V4 (HVA22-like protein a OS=Arabidopsis thaliana OX=3702 GN=HVA22A PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 5.4e-30 Identity = 64/151 (42.38%), Postives = 99/151 (65.56%), Query Frame = 0
BLAST of Cp4.1LG16g07360 vs. ExPASy Swiss-Prot
Match: Q9SYX7 (HVA22-like protein b OS=Arabidopsis thaliana OX=3702 GN=HVA22B PE=2 SV=2) HSP 1 Score: 114.0 bits (284), Expect = 1.5e-24 Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 0
BLAST of Cp4.1LG16g07360 vs. ExPASy Swiss-Prot
Match: Q9S784 (HVA22-like protein c OS=Arabidopsis thaliana OX=3702 GN=HVA22C PE=2 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 2.6e-24 Identity = 60/158 (37.97%), Postives = 96/158 (60.76%), Query Frame = 0
BLAST of Cp4.1LG16g07360 vs. ExPASy Swiss-Prot
Match: Q9FED2 (HVA22-like protein e OS=Arabidopsis thaliana OX=3702 GN=HVA22E PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.3e-23 Identity = 53/99 (53.54%), Postives = 70/99 (70.71%), Query Frame = 0
BLAST of Cp4.1LG16g07360 vs. NCBI nr
Match: XP_023511892.1 (HVA22-like protein f isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 311 bits (796), Expect = 1.09e-106 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g07360 vs. NCBI nr
Match: KAG6570567.1 (HVA22-like protein f, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 306 bits (784), Expect = 7.37e-105 Identity = 153/156 (98.08%), Postives = 155/156 (99.36%), Query Frame = 0
BLAST of Cp4.1LG16g07360 vs. NCBI nr
Match: KAG7010421.1 (HVA22-like protein f [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 305 bits (780), Expect = 3.00e-104 Identity = 152/156 (97.44%), Postives = 155/156 (99.36%), Query Frame = 0
BLAST of Cp4.1LG16g07360 vs. NCBI nr
Match: XP_022944350.1 (HVA22-like protein f [Cucurbita moschata]) HSP 1 Score: 303 bits (775), Expect = 1.74e-103 Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 0
BLAST of Cp4.1LG16g07360 vs. NCBI nr
Match: XP_022986043.1 (HVA22-like protein f [Cucurbita maxima]) HSP 1 Score: 298 bits (762), Expect = 1.67e-101 Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 0
BLAST of Cp4.1LG16g07360 vs. ExPASy TrEMBL
Match: A0A6J1FYL8 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111448816 PE=3 SV=1) HSP 1 Score: 303 bits (775), Expect = 8.41e-104 Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 0
BLAST of Cp4.1LG16g07360 vs. ExPASy TrEMBL
Match: A0A6J1JFC2 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111483897 PE=3 SV=1) HSP 1 Score: 298 bits (762), Expect = 8.08e-102 Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 0
BLAST of Cp4.1LG16g07360 vs. ExPASy TrEMBL
Match: A0A5D3DA55 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold519G00090 PE=3 SV=1) HSP 1 Score: 286 bits (733), Expect = 2.14e-97 Identity = 142/156 (91.03%), Postives = 151/156 (96.79%), Query Frame = 0
BLAST of Cp4.1LG16g07360 vs. ExPASy TrEMBL
Match: A0A1S3C319 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103496325 PE=3 SV=1) HSP 1 Score: 286 bits (733), Expect = 2.14e-97 Identity = 142/156 (91.03%), Postives = 151/156 (96.79%), Query Frame = 0
BLAST of Cp4.1LG16g07360 vs. ExPASy TrEMBL
Match: A0A0A0KF72 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G176940 PE=3 SV=1) HSP 1 Score: 284 bits (727), Expect = 1.76e-96 Identity = 141/156 (90.38%), Postives = 151/156 (96.79%), Query Frame = 0
BLAST of Cp4.1LG16g07360 vs. TAIR 10
Match: AT2G42820.1 (HVA22-like protein F ) HSP 1 Score: 208.0 bits (528), Expect = 5.5e-54 Identity = 96/158 (60.76%), Postives = 128/158 (81.01%), Query Frame = 0
BLAST of Cp4.1LG16g07360 vs. TAIR 10
Match: AT1G74520.1 (HVA22 homologue A ) HSP 1 Score: 132.1 bits (331), Expect = 3.8e-31 Identity = 64/151 (42.38%), Postives = 99/151 (65.56%), Query Frame = 0
BLAST of Cp4.1LG16g07360 vs. TAIR 10
Match: AT5G62490.1 (HVA22 homologue B ) HSP 1 Score: 114.0 bits (284), Expect = 1.1e-25 Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 0
BLAST of Cp4.1LG16g07360 vs. TAIR 10
Match: AT1G69700.1 (HVA22 homologue C ) HSP 1 Score: 113.2 bits (282), Expect = 1.8e-25 Identity = 60/158 (37.97%), Postives = 96/158 (60.76%), Query Frame = 0
BLAST of Cp4.1LG16g07360 vs. TAIR 10
Match: AT5G50720.1 (HVA22 homologue E ) HSP 1 Score: 110.9 bits (276), Expect = 9.2e-25 Identity = 53/99 (53.54%), Postives = 70/99 (70.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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