Cp4.1LG16g07170 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTCTATGATCTGTCCATTATTTGTTCCTCCTCGAAGCTTCGCGTATCACGAGGTACTCGTTCTGCTGTCTGCCGCGGGAGACATTTCTTCCTCCTTCTTCTCCGCCCTCTCTCTTTCCAGTTTCGCGCCTCCGTTTCTGTTTCTCTGATCGCGAGCTCCATCCGATTTCATCGCTTGGGGTTCCTTTGATTTGGGGTTTTGTACGGTAGGATTTGATTCAAATGTCTGCGGCTACTGCACCGTTGAACAAAATTGAGCGAGCCCACCAGATGTACCGTGAGGGGCTCTATGTCGATGCCCTTAGATTTTACACTGAAGCGCTTGCCATGGCCAAGACCAAGTCCCAGAGGATTGCGCTGCATAGTAACAGAGCTGCTTGTCACTTGAAACTTCATGATTTTAAGAAGGTGCGTAATGATCCCACTATTTTTATTTGGGGGTTTTTGTACTGGTGTGATGATTCCTGAAGAACAATTGTTATTGCTGTTGATTTGATTTCGAATTCGAAGCGGTTCGCGTTTTTACCGGAATCGGATTTGCATTTCGTTTATTGAAACTGATATGTCTAGATATGCTTTCAAATAATCGAATCGATCACTGATTCTAGAATTATAATCCTTCGCTTGTAGTGTGATTTTTCTTTTCCCTTCGTGTATTTGATTTTTATTCCGTATTTAATTGGAGTTTGATTCCTTATAATCTTATTGTTCCATTCTAGGCAGCAGAAGAATGTACGTGGGTTCTTGAACTTGATCATAAGCACACTGGAGCGCTAATGCTCCGTGCCCAGACTCTTGTCACACTCAAGGAATACCATTCTGCTCTGTTTGATGTCAACAGACTTATAGAACTGAACCCATCATCAGAAGTTTATCAAAATCTTCAAACTCGTCTCAAGACGCAATTGGTATGCACTTACTACTTCTTCCTTATCATACTGTTTGTTCTCTGATCATGTTGATGAAGAATTCAGCTGTAGACATTACTGTTCGATGCTGCTTATAATGTTATAGTATTCGTATTTGATCTCGTTAATTGAATCACGCCGTGACGAACAAGTTGTATCAGGATTTGTATTGCTGCAACATAGCAATGTGATTCTGGGTTTTTGTTGATCTTATTCATTAATCTTCAACTTGATTGTATACAATTGTGCTTGCGGCCATCAGTAATGGATCTTTTTTATGCTTAAGGAAAGTCACTTGCTCCAATACCTGAATCAGAAGCAGAGCTTGAAGAAGAGGAGGAAGAAGAATATGATGTTGAGTTCAATGACTATGCAGCCGATGAGAAGTGCAATGAGGGAAAAGGAAATGTTATAGCTCCAAGTATTGTTCAGTTACAGAAACCTGAGCACGATTGCAATTTGATAAAAACTACCCTTATCCAGACAACTCGGGGCGACAGTGGATTATCTGATGAAAAAAGGAGCAATCAGAAAGCTGAGGTGAAAAACACCACAAAAAGTGAAGTTGTTGTCCTTCAAGCTCAGAGCAAGAAGGGCACGACCGACGTAGGTCCCAATGGCTGGCAAACGATCCCAAAACCAAAAGGACACTCGACTTTAGACTATGCACGTTGGGATAGAGTTGAGGATGATTCCAGTGAAGACGACGACGATGATGAAGAGGAGTCGGGACCTCAATTTCGTTTTCGTGTCAGAACCGTTGGCGTTAAACCTGTGAAATGAACTGAATATACATTCACAATCAAATGCCTCGCTGTCTTGATAGAAAAACGACACAATGAGCAACTCGGAGCTCCATGGATTTGGAAATTCATTCGTTTAAGATCAGTACTGTTGAGACCTTCAGACCTATGTAATGTGTAGTTGGTCAGACGCAAAATTATCACCGTGGATGTGATCGACGAGCAAGCTTTGCACATAAAGATTTTATACAAAGCTCGAGCTGACGCTGTTTGGTTTGAGTTATGTGTCTGCTGTACAACATCAATTTCTTGGTGGTTAATAGAAATGGAGATCCCGTCTTGGATATGGAAGATATCTCTGGTACATAATGTTCAATACTTGTTTCTGTTTCTTGAGAAAAGATGGTATATACTATTATATGCCGCTGTCCGCCACTGATTGATGGTAGACTCTGCAGCACATAAGCTTCAAATTTGATGAAATTGGGAAGAACAAATACTTGTATGATAACAACTGAATGAATTGTTAATTCTCTGCTCCTTCGTGTACCTATGTCTCTGCTATGTTCCTACTTTCTCTGTCGTGGGTTTTGTTTTTGTGAGTTCCTAGATCAGTTGGAATGGAGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTCAACACATTTTAAAAACTGTGAGGCTGACGATGATATATAATGGGTCAAAGCAGATAATATCTGTAGCGGTGGACTTAAGCTGTCACAGTTTTCTATGACAACCAAGATCGTGGAGGTAAGTAGCCATTATTTATATATTTTTGGCTGTAACATGTTTCTTTTTTGACACCATTATTCTTTGACACCAAAGCTAAGCAAGCAAAAAAGATGTTATGAATTGCTTGGAGTTGGAGAGATGGATGGCATTGGGAATAGGCTAAGCTTACGGCTACGCAATCAAAAGAAATCTCTTCCTTCTTTTGGTGGAGAAGCAACGGATGAAATGAAGAATCATTATTGACATAGTATTATCATTTATTGTCCGTGCCTATGTATTTTAATTAGTTTATGTAACGGTCCAAGTCTATTGTCAGTAGATATTGTTCATTTTAACTCGTTACGTCACCATTAGCTTCACAGAACGCGTCTATTAAGGAGAAACTTTCACACCTTATAAGGAATACAGTGGAATCTTACAATCTACTCCACTTGGAGGCGTAACGTCCGTCCAATGTCGAGCTCTAATACCATTACCTACCCATATTAGGAATTCAAGTATTTATTTTACAAATGCGACACACACATAATTTAGGAATTAATGTTGGA CGTCTATGATCTGTCCATTATTTGTTCCTCCTCGAAGCTTCGCGTATCACGAGGTACTCGTTCTGCTGTCTGCCGCGGGAGACATTTCTTCCTCCTTCTTCTCCGCCCTCTCTCTTTCCAGTTTCGCGCCTCCGTTTCTGTTTCTCTGATCGCGAGCTCCATCCGATTTCATCGCTTGGGGTTCCTTTGATTTGGGGTTTTGTACGGTAGGATTTGATTCAAATGTCTGCGGCTACTGCACCGTTGAACAAAATTGAGCGAGCCCACCAGATGTACCGTGAGGGGCTCTATGTCGATGCCCTTAGATTTTACACTGAAGCGCTTGCCATGGCCAAGACCAAGTCCCAGAGGATTGCGCTGCATAGTAACAGAGCTGCTTGTCACTTGAAACTTCATGATTTTAAGAAGGCAGCAGAAGAATGTACGTGGGTTCTTGAACTTGATCATAAGCACACTGGAGCGCTAATGCTCCGTGCCCAGACTCTTGTCACACTCAAGGAATACCATTCTGCTCTGTTTGATGTCAACAGACTTATAGAACTGAACCCATCATCAGAAGTTTATCAAAATCTTCAAACTCGTCTCAAGACGCAATTGTCACTTGCTCCAATACCTGAATCAGAAGCAGAGCTTGAAGAAGAGGAGGAAGAAGAATATGATGTTGAGTTCAATGACTATGCAGCCGATGAGAAGTGCAATGAGGGAAAAGGAAATGTTATAGCTCCAAGTATTGTTCAGTTACAGAAACCTGAGCACGATTGCAATTTGATAAAAACTACCCTTATCCAGACAACTCGGGGCGACAGTGGATTATCTGATGAAAAAAGGAGCAATCAGAAAGCTGAGGTGAAAAACACCACAAAAAGTGAAGTTGTTGTCCTTCAAGCTCAGAGCAAGAAGGGCACGACCGACGTAGGTCCCAATGGCTGGCAAACGATCCCAAAACCAAAAGGACACTCGACTTTAGACTATGCACGTTGGGATAGAGTTGAGGATGATTCCAGTGAAGACGACGACGATGATGAAGAGGAGTCGGGACCTCAATTTCGTTTTCGTGTCAGAACCGTTGGCGTTAAACCTGTGAAATGAACTGAATATACATTCACAATCAAATGCCTCGCTGTCTTGATAGAAAAACGACACAATGAGCAACTCGGAGCTCCATGGATTTGGAAATTCATTCGTTTAAGATCAGTACTGTTGAGACCTTCAGACCTATGTAATGTGTAGTTGGTCAGACGCAAAATTATCACCGTGGATGTGATCGACGAGCAAGCTTTGCACATAAAGATTTTATACAAAGCTCGAGCTGACGCTGTTTGGTTTGAGTTATGTGTCTGCTGTACAACATCAATTTCTTGGTGGTTAATAGAAATGGAGATCCCGTCTTGGATATGGAAGATATCTCTGGTACATAATGTTCAATACTTGTTTCTGTTTCTTGAGAAAAGATGGTATATACTATTATATGCCGCTGTCCGCCACTGATTGATGGTAGACTCTGCAGCACATAAGCTTCAAATTTGATGAAATTGGGAAGAACAAATACTTGTATGATAACAACTGAATGAATTGTTAATTCTCTGCTCCTTCGTGTACCTATGTCTCTGCTATGTTCCTACTTTCTCTGTCGTGGGTTTTGTTTTTGTGAGTTCCTAGATCAGTTGGAATGGAGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTCAACACATTTTAAAAACTGTGAGGCTGACGATGATATATAATGGGTCAAAGCAGATAATATCTGTAGCGGTGGACTTAAGCTGTCACAGTTTTCTATGACAACCAAGATCGTGGAGGTAAGTAGCCATTATTTATATATTTTTGGCTGTAACATGTTTCTTTTTTGACACCATTATTCTTTGACACCAAAGCTAAGCAAGCAAAAAAGATGTTATGAATTGCTTGGAGTTGGAGAGATGGATGGCATTGGGAATAGGCTAAGCTTACGGCTACGCAATCAAAAGAAATCTCTTCCTTCTTTTGGTGGAGAAGCAACGGATGAAATGAAGAATCATTATTGACATAGTATTATCATTTATTGTCCGTGCCTATGTATTTTAATTAGTTTATGTAACGGTCCAAGTCTATTGTCAGTAGATATTGTTCATTTTAACTCGTTACGTCACCATTAGCTTCACAGAACGCGTCTATTAAGGAGAAACTTTCACACCTTATAAGGAATACAGTGGAATCTTACAATCTACTCCACTTGGAGGCGTAACGTCCGTCCAATGTCGAGCTCTAATACCATTACCTACCCATATTAGGAATTCAAGTATTTATTTTACAAATGCGACACACACATAATTTAGGAATTAATGTTGGA ATGTCTGCGGCTACTGCACCGTTGAACAAAATTGAGCGAGCCCACCAGATGTACCGTGAGGGGCTCTATGTCGATGCCCTTAGATTTTACACTGAAGCGCTTGCCATGGCCAAGACCAAGTCCCAGAGGATTGCGCTGCATAGTAACAGAGCTGCTTGTCACTTGAAACTTCATGATTTTAAGAAGGCAGCAGAAGAATGTACGTGGGTTCTTGAACTTGATCATAAGCACACTGGAGCGCTAATGCTCCGTGCCCAGACTCTTGTCACACTCAAGGAATACCATTCTGCTCTGTTTGATGTCAACAGACTTATAGAACTGAACCCATCATCAGAAGTTTATCAAAATCTTCAAACTCGTCTCAAGACGCAATTGTCACTTGCTCCAATACCTGAATCAGAAGCAGAGCTTGAAGAAGAGGAGGAAGAAGAATATGATGTTGAGTTCAATGACTATGCAGCCGATGAGAAGTGCAATGAGGGAAAAGGAAATGTTATAGCTCCAAGTATTGTTCAGTTACAGAAACCTGAGCACGATTGCAATTTGATAAAAACTACCCTTATCCAGACAACTCGGGGCGACAGTGGATTATCTGATGAAAAAAGGAGCAATCAGAAAGCTGAGGTGAAAAACACCACAAAAAGTGAAGTTGTTGTCCTTCAAGCTCAGAGCAAGAAGGGCACGACCGACGTAGGTCCCAATGGCTGGCAAACGATCCCAAAACCAAAAGGACACTCGACTTTAGACTATGCACGTTGGGATAGAGTTGAGGATGATTCCAGTGAAGACGACGACGATGATGAAGAGGAGTCGGGACCTCAATTTCGTTTTCGTGTCAGAACCGTTGGCGTTAAACCTGTGAAATGA MSAATAPLNKIERAHQMYREGLYVDALRFYTEALAMAKTKSQRIALHSNRAACHLKLHDFKKAAEECTWVLELDHKHTGALMLRAQTLVTLKEYHSALFDVNRLIELNPSSEVYQNLQTRLKTQLSLAPIPESEAELEEEEEEEYDVEFNDYAADEKCNEGKGNVIAPSIVQLQKPEHDCNLIKTTLIQTTRGDSGLSDEKRSNQKAEVKNTTKSEVVVLQAQSKKGTTDVGPNGWQTIPKPKGHSTLDYARWDRVEDDSSEDDDDDEEESGPQFRFRVRTVGVKPVK Homology
BLAST of Cp4.1LG16g07170 vs. ExPASy Swiss-Prot
Match: Q99KD5 (Protein unc-45 homolog A OS=Mus musculus OX=10090 GN=Unc45a PE=1 SV=2) HSP 1 Score: 75.5 bits (184), Expect = 1.1e-12 Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 0
BLAST of Cp4.1LG16g07170 vs. ExPASy Swiss-Prot
Match: Q32PZ3 (Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.1e-12 Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 0
BLAST of Cp4.1LG16g07170 vs. ExPASy Swiss-Prot
Match: Q9H3U1 (Protein unc-45 homolog A OS=Homo sapiens OX=9606 GN=UNC45A PE=1 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 5.5e-12 Identity = 40/114 (35.09%), Postives = 61/114 (53.51%), Query Frame = 0
BLAST of Cp4.1LG16g07170 vs. ExPASy Swiss-Prot
Match: Q5RAP0 (Protein unc-45 homolog A OS=Pongo abelii OX=9601 GN=UNC45A PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.7e-11 Identity = 39/114 (34.21%), Postives = 61/114 (53.51%), Query Frame = 0
BLAST of Cp4.1LG16g07170 vs. ExPASy Swiss-Prot
Match: Q9CYG7 (Mitochondrial import receptor subunit TOM34 OS=Mus musculus OX=10090 GN=Tomm34 PE=1 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.6e-11 Identity = 38/115 (33.04%), Postives = 67/115 (58.26%), Query Frame = 0
BLAST of Cp4.1LG16g07170 vs. NCBI nr
Match: XP_023511845.1 (protein unc-45 homolog B-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 565 bits (1456), Expect = 6.37e-203 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g07170 vs. NCBI nr
Match: KAG7010438.1 (Protein unc-45-like A [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 559 bits (1440), Expect = 1.75e-200 Identity = 284/288 (98.61%), Postives = 286/288 (99.31%), Query Frame = 0
BLAST of Cp4.1LG16g07170 vs. NCBI nr
Match: XP_022943622.1 (tetratricopeptide repeat protein 12-like [Cucurbita moschata]) HSP 1 Score: 558 bits (1437), Expect = 5.01e-200 Identity = 283/288 (98.26%), Postives = 286/288 (99.31%), Query Frame = 0
BLAST of Cp4.1LG16g07170 vs. NCBI nr
Match: XP_022986013.1 (tetratricopeptide repeat protein 12-like [Cucurbita maxima]) HSP 1 Score: 555 bits (1431), Expect = 4.12e-199 Identity = 282/288 (97.92%), Postives = 285/288 (98.96%), Query Frame = 0
BLAST of Cp4.1LG16g07170 vs. NCBI nr
Match: KAG6570586.1 (Cyclin-T1-5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 556 bits (1432), Expect = 1.39e-186 Identity = 282/287 (98.26%), Postives = 285/287 (99.30%), Query Frame = 0
BLAST of Cp4.1LG16g07170 vs. ExPASy TrEMBL
Match: A0A6J1FTI9 (tetratricopeptide repeat protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111448334 PE=4 SV=1) HSP 1 Score: 558 bits (1437), Expect = 2.43e-200 Identity = 283/288 (98.26%), Postives = 286/288 (99.31%), Query Frame = 0
BLAST of Cp4.1LG16g07170 vs. ExPASy TrEMBL
Match: A0A6J1JF91 (tetratricopeptide repeat protein 12-like OS=Cucurbita maxima OX=3661 GN=LOC111483876 PE=4 SV=1) HSP 1 Score: 555 bits (1431), Expect = 1.99e-199 Identity = 282/288 (97.92%), Postives = 285/288 (98.96%), Query Frame = 0
BLAST of Cp4.1LG16g07170 vs. ExPASy TrEMBL
Match: A0A5D3C9S1 (Peptidyl-prolyl cis-trans isomerase FKBP5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00390 PE=4 SV=1) HSP 1 Score: 472 bits (1215), Expect = 1.76e-166 Identity = 246/290 (84.83%), Postives = 260/290 (89.66%), Query Frame = 0
BLAST of Cp4.1LG16g07170 vs. ExPASy TrEMBL
Match: A0A1S3C3M0 (peptidyl-prolyl cis-trans isomerase FKBP5 OS=Cucumis melo OX=3656 GN=LOC103496296 PE=4 SV=1) HSP 1 Score: 472 bits (1215), Expect = 1.76e-166 Identity = 246/290 (84.83%), Postives = 260/290 (89.66%), Query Frame = 0
BLAST of Cp4.1LG16g07170 vs. ExPASy TrEMBL
Match: A0A0A0KEG5 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G137600 PE=4 SV=1) HSP 1 Score: 464 bits (1194), Expect = 2.68e-163 Identity = 244/290 (84.14%), Postives = 259/290 (89.31%), Query Frame = 0
BLAST of Cp4.1LG16g07170 vs. TAIR 10
Match: AT1G56090.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 288.1 bits (736), Expect = 7.7e-78 Identity = 167/292 (57.19%), Postives = 201/292 (68.84%), Query Frame = 0
BLAST of Cp4.1LG16g07170 vs. TAIR 10
Match: AT3G25230.1 (rotamase FKBP 1 ) HSP 1 Score: 63.5 bits (153), Expect = 3.1e-10 Identity = 42/132 (31.82%), Postives = 69/132 (52.27%), Query Frame = 0
BLAST of Cp4.1LG16g07170 vs. TAIR 10
Match: AT3G25230.2 (rotamase FKBP 1 ) HSP 1 Score: 63.5 bits (153), Expect = 3.1e-10 Identity = 42/132 (31.82%), Postives = 69/132 (52.27%), Query Frame = 0
BLAST of Cp4.1LG16g07170 vs. TAIR 10
Match: AT4G30480.2 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 55.8 bits (133), Expect = 6.5e-08 Identity = 42/131 (32.06%), Postives = 70/131 (53.44%), Query Frame = 0
BLAST of Cp4.1LG16g07170 vs. TAIR 10
Match: AT3G54010.1 (FKBP-type peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 42.4 bits (98), Expect = 7.4e-04 Identity = 31/103 (30.10%), Postives = 48/103 (46.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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