Cp4.1LG16g06730 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG16g06730
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionLate embryogenesis abundant protein
LocationCp4.1LG16: 7086380 .. 7086946 (+)
RNA-Seq ExpressionCp4.1LG16g06730
SyntenyCp4.1LG16g06730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCTCCCAGTAGGAAACTACGAAGCATTTGCATACCCGTATTGCTCTCTGTAACTCTGCTCGTAATTTCGATCCTCATTTTAGCCTTTACTGCTTTCAAGCCCAAGCGGCCCACCATCGCCGTCGATTCAGTTTCTCTGCTCGATCTGAACATTTCTCTGGACGCCGCTAGGCTGAGCGTCGATCTGAATTTGTCTCTCTTGCTTGATCTCTCCGTTGAGAATCCGAATAAGGTAGCCTTCGAATACTCCTATAGCACCGCCGTCGTGAGTTACAGAGGCGAAGAACTCGGAGAAGCGCCGATTCCGGCCGGCCGGTTGCCGGCCGACAGGACTGAGAAAATGAACCTAACATTAACGATGATGGCTGACCGGCTCCTGGCTAAGTCGGAGCTATTCTCCGACGCGATCTCTGGTGAAGTCCCGATCAACATTTTCACCCGACTGTCCGGGATTGTGAAGGTGATCGGTGTTTTCAAGATTCATGTTGTGGCCTCGTCGTCTTGTGATTTCACCATCGGCATTGGAAACAGAAGCATTAAAGATCAGAAATGCCATTACTAG

mRNA sequence

ATGGCGGCTCCCAGTAGGAAACTACGAAGCATTTGCATACCCGTATTGCTCTCTGTAACTCTGCTCGTAATTTCGATCCTCATTTTAGCCTTTACTGCTTTCAAGCCCAAGCGGCCCACCATCGCCGTCGATTCAGTTTCTCTGCTCGATCTGAACATTTCTCTGGACGCCGCTAGGCTGAGCGTCGATCTGAATTTGTCTCTCTTGCTTGATCTCTCCGTTGAGAATCCGAATAAGGTAGCCTTCGAATACTCCTATAGCACCGCCGTCGTGAGTTACAGAGGCGAAGAACTCGGAGAAGCGCCGATTCCGGCCGGCCGGTTGCCGGCCGACAGGACTGAGAAAATGAACCTAACATTAACGATGATGGCTGACCGGCTCCTGGCTAAGTCGGAGCTATTCTCCGACGCGATCTCTGGTGAAGTCCCGATCAACATTTTCACCCGACTGTCCGGGATTGTGAAGGTGATCGGTGTTTTCAAGATTCATGTTGTGGCCTCGTCGTCTTGTGATTTCACCATCGGCATTGGAAACAGAAGCATTAAAGATCAGAAATGCCATTACTAG

Coding sequence (CDS)

ATGGCGGCTCCCAGTAGGAAACTACGAAGCATTTGCATACCCGTATTGCTCTCTGTAACTCTGCTCGTAATTTCGATCCTCATTTTAGCCTTTACTGCTTTCAAGCCCAAGCGGCCCACCATCGCCGTCGATTCAGTTTCTCTGCTCGATCTGAACATTTCTCTGGACGCCGCTAGGCTGAGCGTCGATCTGAATTTGTCTCTCTTGCTTGATCTCTCCGTTGAGAATCCGAATAAGGTAGCCTTCGAATACTCCTATAGCACCGCCGTCGTGAGTTACAGAGGCGAAGAACTCGGAGAAGCGCCGATTCCGGCCGGCCGGTTGCCGGCCGACAGGACTGAGAAAATGAACCTAACATTAACGATGATGGCTGACCGGCTCCTGGCTAAGTCGGAGCTATTCTCCGACGCGATCTCTGGTGAAGTCCCGATCAACATTTTCACCCGACTGTCCGGGATTGTGAAGGTGATCGGTGTTTTCAAGATTCATGTTGTGGCCTCGTCGTCTTGTGATTTCACCATCGGCATTGGAAACAGAAGCATTAAAGATCAGAAATGCCATTACTAG

Protein sequence

MAAPSRKLRSICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARLSVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRTEKMNLTLTMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDFTIGIGNRSIKDQKCHY
Homology
BLAST of Cp4.1LG16g06730 vs. NCBI nr
Match: XP_023512272.1 (uncharacterized protein LOC111777064 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 347 bits (890), Expect = 5.70e-120
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0

Query: 1   MAAPSRKLRSICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 60
           MAAPSRKLRSICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL
Sbjct: 1   MAAPSRKLRSICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 60

Query: 61  SVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRTEKMNLTL 120
           SVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRTEKMNLTL
Sbjct: 61  SVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRTEKMNLTL 120

Query: 121 TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDFTIGIGNRS 180
           TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDFTIGIGNRS
Sbjct: 121 TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDFTIGIGNRS 180

Query: 181 IKDQKCHY 188
           IKDQKCHY
Sbjct: 181 IKDQKCHY 188

BLAST of Cp4.1LG16g06730 vs. NCBI nr
Match: KAG7010478.1 (hypothetical protein SDJN02_27272, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 340 bits (871), Expect = 4.49e-117
Identity = 184/188 (97.87%), Postives = 186/188 (98.94%), Query Frame = 0

Query: 1   MAAPSRKLRSICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 60
           MAAPSRKLRSICIPVLLSVTLL+ISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL
Sbjct: 1   MAAPSRKLRSICIPVLLSVTLLIISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 60

Query: 61  SVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRTEKMNLTL 120
           SVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAG LPADRTEKMNLTL
Sbjct: 61  SVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGWLPADRTEKMNLTL 120

Query: 121 TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDFTIGIGNRS 180
           TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCD TIGIGNRS
Sbjct: 121 TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDLTIGIGNRS 180

Query: 181 IKDQKCHY 188
           I+DQKCHY
Sbjct: 181 IEDQKCHY 188

BLAST of Cp4.1LG16g06730 vs. NCBI nr
Match: XP_022944105.1 (uncharacterized protein LOC111448649 [Cucurbita moschata])

HSP 1 Score: 338 bits (867), Expect = 1.83e-116
Identity = 182/188 (96.81%), Postives = 186/188 (98.94%), Query Frame = 0

Query: 1   MAAPSRKLRSICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 60
           MAAPSRKLRSICIPVLLSVTLL+ISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL
Sbjct: 1   MAAPSRKLRSICIPVLLSVTLLIISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 60

Query: 61  SVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRTEKMNLTL 120
           SVDLNLSLLLDLS+ENPNKVAFEYSY+TAVVSYRGEELGEAPIPAG LPADRTEKMNLTL
Sbjct: 61  SVDLNLSLLLDLSIENPNKVAFEYSYTTAVVSYRGEELGEAPIPAGWLPADRTEKMNLTL 120

Query: 121 TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDFTIGIGNRS 180
           TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCD TIGIGNRS
Sbjct: 121 TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDLTIGIGNRS 180

Query: 181 IKDQKCHY 188
           I+DQKCHY
Sbjct: 181 IEDQKCHY 188

BLAST of Cp4.1LG16g06730 vs. NCBI nr
Match: KAG6570626.1 (hypothetical protein SDJN03_29541, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 337 bits (864), Expect = 6.03e-116
Identity = 183/188 (97.34%), Postives = 185/188 (98.40%), Query Frame = 0

Query: 1   MAAPSRKLRSICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 60
           MAAPSRKLRSICIPVLLSVTLL+ISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL
Sbjct: 5   MAAPSRKLRSICIPVLLSVTLLIISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 64

Query: 61  SVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRTEKMNLTL 120
           SV LNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAG LPADRTEKMNLTL
Sbjct: 65  SVGLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGWLPADRTEKMNLTL 124

Query: 121 TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDFTIGIGNRS 180
           TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCD TIGIGNRS
Sbjct: 125 TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDLTIGIGNRS 184

Query: 181 IKDQKCHY 188
           I+DQKCHY
Sbjct: 185 IEDQKCHY 192

BLAST of Cp4.1LG16g06730 vs. NCBI nr
Match: XP_022986213.1 (uncharacterized protein LOC111484029 [Cucurbita maxima])

HSP 1 Score: 330 bits (847), Expect = 2.04e-113
Identity = 180/188 (95.74%), Postives = 182/188 (96.81%), Query Frame = 0

Query: 1   MAAPSRKLRSICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 60
           M APSRKLRSICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL
Sbjct: 1   MVAPSRKLRSICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 60

Query: 61  SVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRTEKMNLTL 120
           SVDLNL LLLDLSVENPNKVAFEYSYSTAVVSYRGEELGE PIPAGRL ADRTEKMNLTL
Sbjct: 61  SVDLNLFLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEVPIPAGRLLADRTEKMNLTL 120

Query: 121 TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDFTIGIGNRS 180
            MMADRLLAKSELFSDA+SGEVPINIFTRLSGIVKVIGVFKIHVVASSSCD TIGIGNRS
Sbjct: 121 KMMADRLLAKSELFSDAMSGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDLTIGIGNRS 180

Query: 181 IKDQKCHY 188
           I+DQKCHY
Sbjct: 181 IEDQKCHY 188

BLAST of Cp4.1LG16g06730 vs. ExPASy TrEMBL
Match: A0A6J1FYG9 (uncharacterized protein LOC111448649 OS=Cucurbita moschata OX=3662 GN=LOC111448649 PE=4 SV=1)

HSP 1 Score: 338 bits (867), Expect = 8.85e-117
Identity = 182/188 (96.81%), Postives = 186/188 (98.94%), Query Frame = 0

Query: 1   MAAPSRKLRSICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 60
           MAAPSRKLRSICIPVLLSVTLL+ISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL
Sbjct: 1   MAAPSRKLRSICIPVLLSVTLLIISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 60

Query: 61  SVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRTEKMNLTL 120
           SVDLNLSLLLDLS+ENPNKVAFEYSY+TAVVSYRGEELGEAPIPAG LPADRTEKMNLTL
Sbjct: 61  SVDLNLSLLLDLSIENPNKVAFEYSYTTAVVSYRGEELGEAPIPAGWLPADRTEKMNLTL 120

Query: 121 TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDFTIGIGNRS 180
           TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCD TIGIGNRS
Sbjct: 121 TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDLTIGIGNRS 180

Query: 181 IKDQKCHY 188
           I+DQKCHY
Sbjct: 181 IEDQKCHY 188

BLAST of Cp4.1LG16g06730 vs. ExPASy TrEMBL
Match: A0A6J1JFV2 (uncharacterized protein LOC111484029 OS=Cucurbita maxima OX=3661 GN=LOC111484029 PE=4 SV=1)

HSP 1 Score: 330 bits (847), Expect = 9.90e-114
Identity = 180/188 (95.74%), Postives = 182/188 (96.81%), Query Frame = 0

Query: 1   MAAPSRKLRSICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 60
           M APSRKLRSICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL
Sbjct: 1   MVAPSRKLRSICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 60

Query: 61  SVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRTEKMNLTL 120
           SVDLNL LLLDLSVENPNKVAFEYSYSTAVVSYRGEELGE PIPAGRL ADRTEKMNLTL
Sbjct: 61  SVDLNLFLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEVPIPAGRLLADRTEKMNLTL 120

Query: 121 TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDFTIGIGNRS 180
            MMADRLLAKSELFSDA+SGEVPINIFTRLSGIVKVIGVFKIHVVASSSCD TIGIGNRS
Sbjct: 121 KMMADRLLAKSELFSDAMSGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDLTIGIGNRS 180

Query: 181 IKDQKCHY 188
           I+DQKCHY
Sbjct: 181 IEDQKCHY 188

BLAST of Cp4.1LG16g06730 vs. ExPASy TrEMBL
Match: A0A6J1L4F9 (uncharacterized protein LOC111499794 OS=Cucurbita maxima OX=3661 GN=LOC111499794 PE=4 SV=1)

HSP 1 Score: 255 bits (651), Expect = 8.11e-84
Identity = 139/188 (73.94%), Postives = 161/188 (85.64%), Query Frame = 0

Query: 1   MAAPSRKLRSICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 60
           MAA +RK R+ICI VLLS+ +LVI ILILAFT FKPK+PTI VDSVSLLDLNISL+AAR 
Sbjct: 1   MAALNRKRRNICIAVLLSLIVLVILILILAFTVFKPKQPTITVDSVSLLDLNISLNAARF 60

Query: 61  SVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRTEKMNLTL 120
            VDLNL+L++ L+VENPNKVAF++S  TAVVSYRGEE+ EAPIP+GRL  D TEKMNLTL
Sbjct: 61  GVDLNLTLIVQLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSPDGTEKMNLTL 120

Query: 121 TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDFTIGIGNRS 180
           TMMADRLLAKSELFSD I+GE+PI+ F RL+G + VIGVFKI VVA SSCD TI I NRS
Sbjct: 121 TMMADRLLAKSELFSDVIAGELPISTFARLAGKMTVIGVFKIRVVALSSCDLTIDIRNRS 180

Query: 181 IKDQKCHY 188
           ++DQ+C Y
Sbjct: 181 VEDQRCEY 188

BLAST of Cp4.1LG16g06730 vs. ExPASy TrEMBL
Match: A0A6J1G8C1 (uncharacterized protein LOC111451800 OS=Cucurbita moschata OX=3662 GN=LOC111451800 PE=4 SV=1)

HSP 1 Score: 250 bits (639), Expect = 5.43e-82
Identity = 138/188 (73.40%), Postives = 159/188 (84.57%), Query Frame = 0

Query: 1   MAAPSRKLRSICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 60
           MAA +RK R+ICI VLLS+ LLVI ILILAFT FKPK+PTI VDS+SLLDLNISLDAAR 
Sbjct: 1   MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARF 60

Query: 61  SVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRTEKMNLTL 120
            VDLNL+L++ L+VENPNKVAF++S  TAVVSYRGEE+ EAPIP+GRL AD TEKMNLTL
Sbjct: 61  RVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL 120

Query: 121 TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDFTIGIGNRS 180
           TMMADRLLAKSEL SD ++GE+PI+ F RL G V VIGVFKI VVA SSCD TI I  R+
Sbjct: 121 TMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRN 180

Query: 181 IKDQKCHY 188
           ++DQ+C Y
Sbjct: 181 VEDQRCKY 188

BLAST of Cp4.1LG16g06730 vs. ExPASy TrEMBL
Match: A0A1S3CNL0 (uncharacterized protein LOC103502964 OS=Cucumis melo OX=3656 GN=LOC103502964 PE=4 SV=1)

HSP 1 Score: 216 bits (549), Expect = 2.46e-68
Identity = 118/189 (62.43%), Postives = 149/189 (78.84%), Query Frame = 0

Query: 1   MAAPSRKL-RSICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAAR 60
           MAAP+ KL R+ CI ++LS+ LLV+ +L+LAFT FKP+RP I VDSVSLLDLN++L    
Sbjct: 1   MAAPASKLLRNFCITLVLSLILLVVLVLVLAFTVFKPQRPIIVVDSVSLLDLNVALTDG- 60

Query: 61  LSVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRTEKMNLT 120
             VDLNLS+ +DL+VENPNKVAFEYS STAVV YRGE++GEAPIP GRLP   T+KMNLT
Sbjct: 61  --VDLNLSINVDLTVENPNKVAFEYSKSTAVVIYRGEKVGEAPIPGGRLPGKGTKKMNLT 120

Query: 121 LTMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDFTIGIGNR 180
           LT+M +R+L +SE+FSD +SG++ I+   RL+G VKV+GV KIHVVAS+SCD  I + N 
Sbjct: 121 LTIMGERMLGRSEVFSDVVSGQLSISTLARLAGKVKVMGVVKIHVVASTSCDLIIDVKNG 180

Query: 181 SIKDQKCHY 188
           S  DQ C +
Sbjct: 181 SFGDQLCQF 186

BLAST of Cp4.1LG16g06730 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 170.2 bits (430), Expect = 1.5e-42
Identity = 86/178 (48.31%), Postives = 132/178 (74.16%), Query Frame = 0

Query: 11  ICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARLSVDLNLSLLL 70
           IC  +LL + L+ I I+ILAFT FKPKRPT  +DSV++  L  S++   L V LNL+L +
Sbjct: 55  ICFTILL-ILLIAIVIVILAFTLFKPKRPTTTIDSVTVDRLQASVNPLLLKVLLNLTLNV 114

Query: 71  DLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRTEKMNLTLTMMADRLLAK 130
           DLS++NPN++ F Y  S+A+++YRG+ +GEAP+PA R+ A +T  +N+TLT+MADRLL++
Sbjct: 115 DLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLTLMADRLLSE 174

Query: 131 SELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDFTIGIGNRSIKDQKCHY 189
           ++L SD ++G +P+N F +++G V V+ +FKI V +SSSCD +I + +R++  Q C Y
Sbjct: 175 TQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLSISVSDRNVTSQHCKY 231

BLAST of Cp4.1LG16g06730 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 92.4 bits (228), Expect = 4.1e-19
Identity = 62/180 (34.44%), Postives = 104/180 (57.78%), Query Frame = 0

Query: 10  SICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSL--LDLNISLDAARLSVDLNLS 69
           SIC  V  +  +L   +L L FT F+ K P I ++ V +  LD     +  +L +  N+S
Sbjct: 39  SIC--VTATSLILTTIVLTLVFTVFRVKDPIIKMNGVMVNGLDSVTGTNQVQL-LGTNIS 98

Query: 70  LLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRTEKMNLTLTMMADRL 129
           +++D+SV+NPN  +F+YS +T  + Y+G  +GEA    G+    RT +MN+T+ +M DR+
Sbjct: 99  MIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGKARPHRTSRMNVTVDIMLDRI 158

Query: 130 LAKSELFSD-AISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDFTIGIGNRSIKDQKC 187
           L+   L  + + SG V +  +TR+ G VK++G+ K HV    +C   + I  ++I+D  C
Sbjct: 159 LSDPGLGREISRSGLVNVWSYTRVGGKVKIMGIVKKHVTVKMNCTMAVNITGQAIQDVDC 215

BLAST of Cp4.1LG16g06730 vs. TAIR 10
Match: AT3G05975.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 73.6 bits (179), Expect = 2.0e-13
Identity = 51/184 (27.72%), Postives = 96/184 (52.17%), Query Frame = 0

Query: 6   RKLRSICIPVLLSVTLLVISILILAFTAFKPKRPTIAV--DSVSLLDLNISLDAARLSVD 65
           R++  I   ++  + ++ ++ LILA   FKPK P +     +V  +  NISL      V 
Sbjct: 4   RRICCIVSGIIFVLFVIFMTALILA-QVFKPKHPILQTVSSTVDGISTNISLP---YEVQ 63

Query: 66  LNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRTEKMNLTLTMM 125
           LN +L L++ ++NPN   FEY     +V YR   +G   +P+  LPA  +  +   L + 
Sbjct: 64  LNFTLTLEMLLKNPNVADFEYKTVENLVYYRDTLVGNLTLPSSTLPAKGSVLLPCPLFLQ 123

Query: 126 ADRLLAK-SELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDFTIGIGNRSIK 185
            D+ +A   ++  D + G++ +    ++ G + ++G+FKI + + S C+  +G  +  ++
Sbjct: 124 LDKFVANLGDIVQDVLHGKIVMETRAKMPGKITLLGIFKIPLDSISHCNLVLGFPSMVVE 183

Query: 186 DQKC 187
           DQ C
Sbjct: 184 DQVC 183

BLAST of Cp4.1LG16g06730 vs. TAIR 10
Match: AT1G64450.1 (Glycine-rich protein family )

HSP 1 Score: 55.5 bits (132), Expect = 5.5e-08
Identity = 40/129 (31.01%), Postives = 67/129 (51.94%), Query Frame = 0

Query: 1   MAAPSRKLRS-------ICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNI 60
           MA P  + RS        C    + + +L++ +L++ FT FKPK P I+V++V L    +
Sbjct: 1   MAKPHDRRRSSGRTNLASCAVATVFLLILLVVLLVVYFTVFKPKDPKISVNAVQLPSFAV 60

Query: 61  SLDAARLSVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRT 120
           S + A      N S    ++V NPN+  F +  S+  + Y G ++G   IPAG++ + R 
Sbjct: 61  SNNTA------NFSFSQYVAVRNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRI 120

Query: 121 EKMNLTLTM 123
           + M  T T+
Sbjct: 121 QYMAATFTV 123

BLAST of Cp4.1LG16g06730 vs. TAIR 10
Match: AT2G01080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 55.1 bits (131), Expect = 7.2e-08
Identity = 47/196 (23.98%), Postives = 97/196 (49.49%), Query Frame = 0

Query: 2   AAPSRKLRSICIPVLL---SVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAA 61
           ++ S  L+  C  + L    + LLV++++++   A KPK+P   +  V+++ + IS  +A
Sbjct: 31  SSSSASLKGCCCCLFLLFAFLALLVLAVVLIVILAVKPKKPQFDLQQVAVVYMGISNPSA 90

Query: 62  RL---SVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRTEK 121
            L   +  L+L++ +  +  NPNKV   Y  S+  V Y+G  LG A +P     A  T+ 
Sbjct: 91  VLDPTTASLSLTIRMLFTAVNPNKVGIRYGESSFTVMYKGMPLGRATVPGFYQDAHSTKN 150

Query: 122 MNLTLTMMADRLLA--KSELFSDA-ISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDF 181
           +  T+++    L+    ++L  DA ++  V + +   +   ++V+      V  S +C  
Sbjct: 151 VEATISVDRVNLMQAHAADLVRDASLNDRVELTVRGDVGAKIRVMNFDSPGVQVSVNCGI 210

Query: 182 TIGIGNRSIKDQKCHY 189
            I    +++  ++C +
Sbjct: 211 GISPRKQALIYKQCGF 226

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_023512272.15.70e-120100.00uncharacterized protein LOC111777064 [Cucurbita pepo subsp. pepo][more]
KAG7010478.14.49e-11797.87hypothetical protein SDJN02_27272, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022944105.11.83e-11696.81uncharacterized protein LOC111448649 [Cucurbita moschata][more]
KAG6570626.16.03e-11697.34hypothetical protein SDJN03_29541, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022986213.12.04e-11395.74uncharacterized protein LOC111484029 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1FYG98.85e-11796.81uncharacterized protein LOC111448649 OS=Cucurbita moschata OX=3662 GN=LOC1114486... [more]
A0A6J1JFV29.90e-11495.74uncharacterized protein LOC111484029 OS=Cucurbita maxima OX=3661 GN=LOC111484029... [more]
A0A6J1L4F98.11e-8473.94uncharacterized protein LOC111499794 OS=Cucurbita maxima OX=3661 GN=LOC111499794... [more]
A0A6J1G8C15.43e-8273.40uncharacterized protein LOC111451800 OS=Cucurbita moschata OX=3662 GN=LOC1114518... [more]
A0A1S3CNL02.46e-6862.43uncharacterized protein LOC103502964 OS=Cucumis melo OX=3656 GN=LOC103502964 PE=... [more]
Match NameE-valueIdentityDescription
AT3G54200.11.5e-4248.31Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT2G46150.14.1e-1934.44Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT3G05975.12.0e-1327.72Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT1G64450.15.5e-0831.01Glycine-rich protein family [more]
AT2G01080.17.2e-0823.98Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.40.1820coord: 28..173
e-value: 4.6E-13
score: 51.2
NoneNo IPR availablePANTHERPTHR31852:SF122LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 5..188
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 5..188
NoneNo IPR availableSUPERFAMILY117070LEA14-likecoord: 22..128
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 72..164
e-value: 1.1E-12
score: 48.4

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG16g06730.1Cp4.1LG16g06730.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane