Cp4.1LG16g06510 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g06510
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	zinc finger CCCH domain-containing protein 25
Location	Cp4.1LG16: 6909238 .. 6915819 (-)
RNA-Seq Expression	Cp4.1LG16g06510
Synteny	Cp4.1LG16g06510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTTGTTGAATATTTTATTTATTTATTTATTTTTTTCGATCATAAATCAGTGTTCTAATAAATAAAATCGAAAAATCAAAGCAAATTGGTGAGATTCTCACGGAACGACATCACAGTCTCCACTTGTGGTGTCGTTTCAATTGTCTCTATCCACGGACCTAATTGATTTAAGCGCCCATAGCCGATTCGAACCTGCGCAAGTTTTTGGAACTCACAATTCCTCTCTTCTTCTTCTTCTAATTCTGGCAATGTTTTCCGTCCGCTTCCCCCTCCCGATCGACAACCTTCTACCGCCGCCTAAATTCTTTTTCGGTTGCGCTTTTCCAAAGCCCTATGTCTCCGACCGCCGCCGCTTCTCCAATCTCCGACTGAGAGCGGCGGATGTGGCCGCGCCGACTGCCGAGGAAGCCGCGTTGCCTGCGGGCCTGCAGAAGGAGTTCCTGCCGAGACACGTGGCGGTGATTATGGACGGAAATGTGCGGTGGGCAAGGCGGATGAAGTTGCCGGACTCCAAAGGCCACGACGCCGGCGTACGGTCGTTACGGGAGATGGTTGACCTATGCTTGGAATTGGATATTCCTGTACTCACCGTTTTTGCTTTCTCTTATGATAACTGGCTTCGCTCTAAGGTCCGTTTTCCGTTTTAATTTATTAAATTATAAATTTAGTTAAATTTGTTTAGGATAATTTTTAAAATTACAAATTTTATTTTTGAGTTTTTGAATTTTTTAAAATACAAATTTAAAATTTTATAATTTTGTTATGCATAAAATTTAAATTTATATCTAATTTATCTATTAAATTTTAATTTTTTTAATAAATTTATTGACATAAAATTAATTTTTCTTGAATTTGGTTAAATTTTAAGCTTATTTTATGGATTTTAAAGCTCATATTTAATTTCTCTAAATTTTAAAAATAATCAAAATATTTATATTATATTTATTAAATAAAAATATTTAATATATTTAATTTTTTTAATAATTTAGGAACATCATACACAAAATGAAAAATCTACGGTTATATTTAAACCTAAAATTAAAATTTTAAAAATATAATATAGAACTTTTAATTTTATTTTTTTAATTCTAGAGGCATTTTATTTATTTTGTAAGGTAAAATATCAATTTATTTTCTCTAGTCCATTAAATAATTTTTTTCTTAAAAAAAAAATACCAATATATAAAATTTAAAACATTTTTTTAATTATTATTATATAAATTAATTATGTATTTTTTGTTGGGTAACAGCGGGAGGTCGAGTTTTTGATGTTTTTATTCGAAAGGGTTTTGAAATCTGAGATGGAAAAATCTTCCAGGTAATTCTATTAATATTTTAATTAAATTAATTAGTTAATTAACTAACTAATTAATTGCGTTAATTAAATCAAACACAGCAAGGGAATTAGGTTATCGGTGATTGGGGATTTATCGCTGCTTCCCAAATCCCTACAGAACCTAATAAACACGGCGGTGGAAGAAACGAAATCCAACACCAAACTCCAACTCATCGTGGCGGCGAGTTACAGCGGAAGATACGACGTCGTTCAGGCCTGCAGAAGCCTCGCCCGGAAGGTGAAGAACGACGAGATCCAAGTGGAAGACATCGACGACAGCCTGATCGAACAGGAACTGGAAACGAAATGCACGGCGGTTCCTCACCCCGATCTCCTCATCAGAACCAGCGGCGAACTCCGAATCAGCAACTTCCTGCTCTGGCAATCGGCGTACACCGAATTCTTCTTCACCGAGACGCTCTGGCCGGACTTCCGGAAACAGGATTTCGTGGAGGCTCTGGTTTCGTATCAGACCAGGCAGCGGCGCTACGGCGGAAGGCAGTCTTGATTGATTTCGTCTCCTCCGTTTTCCGGGAAACCCTCGATCAAATAAATACTCTTTTACTGTACACATCAATTGGTTAATATAAATAAATAAATATATATATATATATAATGTTAACGACACCATAGGAAATGAAAGCAGAGATGTAATTTCTAATTTTTATACGTATTAATAATAATATTTTCGGTGTTATATTAAAGTTTTATTATTAATGTATTTTGGAAAACAATAAAATTATTTTAATAATTTAAAGTGTGAATTATTTGACATTTTTTTAATATTTGCAAATTTATTACACACAAAATTTAAAACTAAAAATTATCGTTTTGGTTATTTTTGGGTGATTTAAAAAATTATAATATTAGTAATTTATTAAATATATAGAAAAATATCTTTGAATTTTATATTTCGTTTTAAATATTTATAAATAAAAAAGTTTTAAAATGCTCTTAATTATTTAAAAAAAAATGTTTGAAAATTGAATTTTTCTTAATTATCTTTAATTTTTTTAAAAATATAATAATAATAATAATAAGAAGAAGAAGAAGAAGAAGAAAAAAAAAAAAAGTAGAAAGTTCCTTACCGGCGGATACGGAGAATAGCCTGCGCGCGCTTCGCCCTAGTTCGACTTCGATCCCCTTTCGGGAAGAAAACCCTTGGCGCTCGTTTCTCTGCCCAAGGGAAACTGGAGAGGATCTTGATTTTGATTTTGATTTTGATTTTGGTTTGGAAGTGAGCTATGAATCCTCTAACCCTAGTCAAACGCATCCAGAAAATCAATTCTCAGGAGGCCTCGCTTGGGATTTCTGAGGAAGCTTCATGGCACGCTAAATACAAAGATTCCGCCTACGTTTTCGTTGGAGGCATTCCTTACGATCTCACTGAGGGTGATCTCCTCGCCGTTTTCGCCCAGTAAGTTCATAATTTTATCTGTTTTCTCCTCATTGTGTTCTTCTGTGGCTCTCTGTTCTGATTGGGTAGTTTACTAAGTGGAACATTGAGCTTCTATGCTGGATCTGCGTGTTCGACAATGAAATGATTTATTTTCTCCCTTAGGTGTGGTCTCGTAGTTCGAGTAGCTTCTGAAATGAAATTTCCGAGGTTTTGCATAACTGGAGGATTTTTGTTAGAGAGGGAGTTGATGTTTCAAGTTGTGTAGCTTATGTTTGACCAAATACACTAATTGAGCTCGTTCTTGCTAGTCCATTAGGTTTTGTTGTTCCTTGTATCTTCAGCTTGAGAAAAAGTTTCTCCCTCCCTCCCCTCCCATCTCTCTGAAGGATCAGACAAGTTTTTTTTTAGCTACTTTGCAGAATTCATCTTCCTTGTGATCTCGAAGGGGTAACCATATGACAAGATGTTTGGAGATACGATTAGAAACGGCAAACCTCCACAATGGCATGGTATTGTCCATTTTGAGCATAAGCTCTCATGGATTTGCTTTTGGTTTTTCCAAAATGCCTTGTACCAATGGAGATAGGGTTTCATACTTATTAAACCCATGATCTCTCTTTATTAGCCAATGTGGGACTACTTCGTTCAATAATTTTCAACAATCCTCCCCTTGGATAAAGTACAACATAGAGTCTCTTTTGAGGCCTGTAGAGCCCTTGAACAGTCTCCCCTTAATCGAGGCTCAACACCTTTCTTTAGAGCCCTCGAACAAATTTCACCATTTGTTCGACACTTGAATCACTTTTGACTACACCTTCGAGGCTCACAACTTCTTTGTTTGACACTTGAGGATTCTATTGACATGGCTAAGTTAAGGGTATGACTCTGATACCATGTTAGAAATCACGAACCTCCACAATAGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGACTTTGCTTTTGGTTTTTCCAAAAGGTCTCATGCCAATGGAGATAGTGTTCCTTACTTATAAACCTATGATCTTCCTCTTAATTAGCCAACATGGGACTACTTTCAATAATCCTCGATAGATACCTCTCGAGGTCCTAGGTCTAAGTCTCAATTAGAAGCTTAGTTGCTCAAAACCATTCTCTTCTCCTGGAGCTAGCATTGGAGTGCGTAAAGCCTCTCGAAGATTAGTGGGGTAGGTTGCAAGCATAATACAAGAAGGGCTCTTTGGTATCTTGGTAGTTGGTATATATGTGTGCGTGTGTGTATAATTACATTCCATCCAATCAATAAAAGAAACATCTTCTTCTTCCTTGCCCTTTCAATGTTTAGCTGCCTGTAAATGCATTTTTAACGCAGCATATTAGCCGTGGATTATTTATTTATTTATTTTATCTGAATATTGAAATGTACTTGGACGAACAGGTATGGAGAGATTGTTGATGTTAATCTTGTCAGAGACAAGGGTACAGGAAAGTCGAAAGGCTTTGCCTTTGTTGCATATGAAGATCAGAGAAGTACAATCCTTGCTGTAGGTTGTCTTCAGCTCCTTGCTCTAGGTAGTTCATCGTTATATGGGAATGAATGCAGATTTCTAATTAATGGTGTTTGTCCCTTTCAGATAATTTGAATGGTGCACAGATTCTAGGCCGAATCATTAGGGTTGATCATGTGACTAAATATAAAAAGAAGGAAGAAGAAGATGAAGAAACCGAACAAAAGAAGAGGGAAGCTCGCGGTGTTTGTCGTGCATTTCAAAGGGGTGAATGTACCCGTGGAGCTGGGTGCAAATTCTCTCACGATGAGCAGGTACGTGTGAGACTTCCTATTGTGTAAACTTACTCTAGAAAGTGTAAAAGAGGAATTAATCCCTGACAGTTGGGTAGTGGGGAGGAGGGATGGTTCCTATGTATAGAAATGGAATCAGTTTTGCAGGGGAAGTTTGAGATCCCACATCGGTTGGAGAGGAGAACGAAGAATTCCTTATAAGGGTGTGGAAACTTCTTTCTAGCAGACAAGTTTTAAAATTGTGAGGCTGACGACGATACGTAATAGACTAAAACGGACAATATTTAATAGCGGTAGGCTTGGGCTGTTATAGGAAGTATGTTAGTTTCACAGGATTTTAGTTTACCTTTAATGTTACTAGCTGGCTATCCCTGAGTGAAAGAACTTTAGACATACTAGTTTCTTTACCATGCTTGGCTTAGAGTTTTAGCTTCACTTTAGAAATTTAATGCATCAAGTTTTTTATTATTCAGAGAGCTGCGAACACGGGCTGGGGGGCGGCAGAAGATGCAAGTTCAAAATGGGGACATGACAAGTTCGATGATAAAAAAGATCGTGATCGAGAATTGCGTGCAAAAGGAAGGAAAAATAGTGATGACTTAGAAAGACATCCTAGGGAAACTAGTGGGAGGGCGAGGCAGGAAAGTAAACTGAAAGGCTGGGATGATGGTAAAGAATCAGAACTCAAGTCGAGAGAGAACCATGGTAGGAAAGACGAGAAGAGATTGAGCAGACACGATCCTGATAGCAATCGTGAACTGAAGTCGGGAGATGATCGTTATAGGAGGGAAGAGAAGAGATCTAGTAGGAACCATGATGATAGTGAGAAAGAAGATAAGAGATTGAGAAGACATGGTGATGACGATGATAAGACGAAGTTAGAAGATGATCACCATAAGAAGGAAGAAAGGAGATCGAGAAGGAACCAAGACGACGAACTCCCGCCGCATTCGAGAAGAGACTACAACAAGAGGGAAGAAGACAGGTCAAAAAGGCATGGTGACGAAGAGTATCAGCAAAAACCGAGGGAAGACGATGGTGATAGAAGGGAAAGAGATAAATCGACAAGACATCGCTCAGAATCACATAGGCGGGAAAATCCAGATGAGAAGAGGGATTCTCGATCCTCTCATGGTCGGGATCATTCTCATAGAGAAAGAAACGAAGATCGTCGTAGATAAGGAGGACTGCAACGGATCATTACAGTTAGTCCTGTCTTGTTCAACACACTTAGGTTTTCTTCCGACGGGCTGTTCGGTTTCCTTGTATCGTAATGGGAACTCTTTTTTGTTACCTCACTATCTTGAAACTAAGCTTTATTTGTTCTATCAAAACGGCTATGATAACTCTTTGATCTGGTAATCGCTTAGATCAGAGATTGAAGTTCTTTGGGATGTTGGAATCTTAGCCTTTTGTAAAGATTATGCGCACTATTTAGCGATAGGATCATAGATATCACTGGCTTTAGAATATATGGATAATTTCATTTCAGTTGTAAGAATATTCTTCCAAAGTAATTGATAGCCATTCAGGGTTCCAAATGCAATGTGGATGGCGTCGCATCCTTTTGGTATAATCTTGAGATCTATCTTTAGATTGAATGTTACTATCTATCTGCCATGAAACTGTAATTAAAATTCAGTTCAAATTGCTGAAACATAATTCATTGATTATATAAATTAAAATGCATTGTCATTAATTGTTTCGTTAATGTCTATTTTCATTACTAAAAAGTATGAATATGAGTTTGATTTCTACAACAAATTCAAGTGAACAAAATGAAAATGATGTGAATATCGTCGTAGTTAATGGAACCTAAATTAAAATTGATAATGCTTTGTTCTTATCTTGCGAAAAGAAAAAGATAGATTAGGGCTTCGATACCTTGTATTTAGCCAGCAGTTGATTCATTTTGTCCATTTTTCACGATCAATGGAGCGAAAATCAAGGCCAAATCTGGTTTCTTGATTGGATCTTTCACATTCTATATTTACAATAATCGGTTTCCAGTGAAAAGCGATTCATCATCTTCATCACGGCTTGCCCCACGGAAGTCTTGA

mRNA sequence

ATGATCGCCCATAGCCGATTCGAACCTGCGCAAGTTTTTGGAACTCACAATTCCTCTCTTCTTCTTCTTCTAATTCTGGCAATGTTTTCCGTCCGCTTCCCCCTCCCGATCGACAACCTTCTACCGCCGCCTAAATTCTTTTTCGGTTGCGCTTTTCCAAAGCCCTATGTCTCCGACCGCCGCCGCTTCTCCAATCTCCGACTGAGAGCGGCGGATGTGGCCGCGCCGACTGCCGAGGAAGCCGCGTTGCCTGCGGGCCTGCAGAAGGAGTTCCTGCCGAGACACGTGGCGGTGATTATGGACGGAAATGTGCGGTGGGCAAGGCGGATGAAGTTGCCGGACTCCAAAGGCCACGACGCCGGCGTACGGTCGTTACGGGAGATGGTTGACCTATGCTTGGAATTGGATATTCCTGTACTCACCGTTTTTGCTTTCTCTTATGATAACTGGCTTCGCTCTAAGCGGGAGGTCGAGTTTTTGATGTTTTTATTCGAAAGGGTTTTGAAATCTGAGATGGAAAAATCTTCCAGCAAGGGAATTAGGTTATCGGTGATTGGGGATTTATCGCTGCTTCCCAAATCCCTACAGAACCTAATAAACACGGCGGTGGAAGAAACGAAATCCAACACCAAACTCCAACTCATCGTGGCGGCGAGTTACAGCGGAAGATACGACGTCGTTCAGGCCTGCAGAAGCCTCGCCCGGAAGGTGAAGAACGACGAGATCCAAGTGGAAGACATCGACGACAGCCTGATCGAACAGGAACTGGAAACGAAATGCACGGCGGTTCCTCACCCCGATCTCCTCATCAGAACCAGCGGCGAACTCCGAATCAGCAACTTCCTGCTCTGGCAATCGGCGTACACCGAATTCTTCTTCACCGAGACGCTCTGGCCGGACTTCCGGAAACAGGATTTCGTGGAGGCTCTGGTTTCGTATCAGACCAGGCAGCGGCGCTACGGCGGAAGGCAAAGAAGAAGAAGAAGAAAAAAAAAAAAAGTAGAAAGTTCCTTACCGGCGGATACGGAGAATAGCCTGCGCGCGCTTCGCCCTAGTTCGACTTCGATCCCCTTTCGGGAAGAAAACCCTTGGCGCTCGTTTCTCTGCCCAAGGGAAACTGGAGAGGATCTTGATTTTGATTTTGATTTTGATTTTGCTATGAATCCTCTAACCCTAGTCAAACGCATCCAGAAAATCAATTCTCAGGAGGCCTCGCTTGGGATTTCTGAGGAAGCTTCATGGCACGCTAAATACAAAGATTCCGCCTACGTTTTCGTTGGAGGCATTCCTTACGATCTCACTGAGGGTGATCTCCTCGCCGTTTTCGCCCAGTATGGAGAGATTGTTGATGTTAATCTTGTCAGAGACAAGGGTACAGGAAAGTCGAAAGGCTTTGCCTTTGTTGCATATGAAGATCAGAGAAGTACAATCCTTGCTGTAGATAATTTGAATGGTGCACAGATTCTAGGCCGAATCATTAGGGTTGATCATGTGACTAAATATAAAAAGAAGGAAGAAGAAGATGAAGAAACCGAACAAAAGAAGAGGGAAGCTCGCGGTGTTTGTCGTGCATTTCAAAGGGGTGAATGTACCCGTGGAGCTGGGTGCAAATTCTCTCACGATGAGCAGAGAGCTGCGAACACGGGCTGGGGGGCGGCAGAAGATGCAAGTTCAAAATGGGGACATGACAAGTTCGATGATAAAAAAGATCGTGATCGAGAATTGCGTGCAAAAGGAAGGAAAAATAGTGATGACTTAGAAAGACATCCTAGGGAAACTAGTGGGAGGGCGAGGCAGGAAAGTAAACTGAAAGGCTGGGATGATGGTAAAGAATCAGAACTCAAGTCGAGAGAGAACCATGGTAGGAAAGACGAGAAGAGATTGAGCAGACACGATCCTGATAGCAATCGTGAACTGAAGTCGGGAGATGATCGTTATAGGAGGGAAGAGAAGAGATCTAGTAGGAACCATGATGATAGTGAGAAAGAAGATAAGAGATTGAGAAGACATGGTGATGACGATGATAAGACGAAGTTAGAAGATGATCACCATAAGAAGGAAGAAAGGAGATCGAGAAGGAACCAAGACGACGAACTCCCGCCGCATTCGAGAAGAGACTACAACAAGAGGGAAGAAGACAGGTCAAAAAGGCATGGTGACGAAGAGTATCAGCAAAAACCGAGGGAAGACGATGGTGATAGAAGGGAAAGAGATAAATCGACAAGACATCGCTCAGAATCACATAGGCGGGAAAATCCAGATGAGAAGAGGGATTCTCGATCCTCTCATGGTCGGGATCATTCTCATAGAGAAAGAAACGAAGATCGTCTGAAAAGCGATTCATCATCTTCATCACGGCTTGCCCCACGGAAGTCTTGA

Coding sequence (CDS)

ATGATCGCCCATAGCCGATTCGAACCTGCGCAAGTTTTTGGAACTCACAATTCCTCTCTTCTTCTTCTTCTAATTCTGGCAATGTTTTCCGTCCGCTTCCCCCTCCCGATCGACAACCTTCTACCGCCGCCTAAATTCTTTTTCGGTTGCGCTTTTCCAAAGCCCTATGTCTCCGACCGCCGCCGCTTCTCCAATCTCCGACTGAGAGCGGCGGATGTGGCCGCGCCGACTGCCGAGGAAGCCGCGTTGCCTGCGGGCCTGCAGAAGGAGTTCCTGCCGAGACACGTGGCGGTGATTATGGACGGAAATGTGCGGTGGGCAAGGCGGATGAAGTTGCCGGACTCCAAAGGCCACGACGCCGGCGTACGGTCGTTACGGGAGATGGTTGACCTATGCTTGGAATTGGATATTCCTGTACTCACCGTTTTTGCTTTCTCTTATGATAACTGGCTTCGCTCTAAGCGGGAGGTCGAGTTTTTGATGTTTTTATTCGAAAGGGTTTTGAAATCTGAGATGGAAAAATCTTCCAGCAAGGGAATTAGGTTATCGGTGATTGGGGATTTATCGCTGCTTCCCAAATCCCTACAGAACCTAATAAACACGGCGGTGGAAGAAACGAAATCCAACACCAAACTCCAACTCATCGTGGCGGCGAGTTACAGCGGAAGATACGACGTCGTTCAGGCCTGCAGAAGCCTCGCCCGGAAGGTGAAGAACGACGAGATCCAAGTGGAAGACATCGACGACAGCCTGATCGAACAGGAACTGGAAACGAAATGCACGGCGGTTCCTCACCCCGATCTCCTCATCAGAACCAGCGGCGAACTCCGAATCAGCAACTTCCTGCTCTGGCAATCGGCGTACACCGAATTCTTCTTCACCGAGACGCTCTGGCCGGACTTCCGGAAACAGGATTTCGTGGAGGCTCTGGTTTCGTATCAGACCAGGCAGCGGCGCTACGGCGGAAGGCAAAGAAGAAGAAGAAGAAAAAAAAAAAAAGTAGAAAGTTCCTTACCGGCGGATACGGAGAATAGCCTGCGCGCGCTTCGCCCTAGTTCGACTTCGATCCCCTTTCGGGAAGAAAACCCTTGGCGCTCGTTTCTCTGCCCAAGGGAAACTGGAGAGGATCTTGATTTTGATTTTGATTTTGATTTTGCTATGAATCCTCTAACCCTAGTCAAACGCATCCAGAAAATCAATTCTCAGGAGGCCTCGCTTGGGATTTCTGAGGAAGCTTCATGGCACGCTAAATACAAAGATTCCGCCTACGTTTTCGTTGGAGGCATTCCTTACGATCTCACTGAGGGTGATCTCCTCGCCGTTTTCGCCCAGTATGGAGAGATTGTTGATGTTAATCTTGTCAGAGACAAGGGTACAGGAAAGTCGAAAGGCTTTGCCTTTGTTGCATATGAAGATCAGAGAAGTACAATCCTTGCTGTAGATAATTTGAATGGTGCACAGATTCTAGGCCGAATCATTAGGGTTGATCATGTGACTAAATATAAAAAGAAGGAAGAAGAAGATGAAGAAACCGAACAAAAGAAGAGGGAAGCTCGCGGTGTTTGTCGTGCATTTCAAAGGGGTGAATGTACCCGTGGAGCTGGGTGCAAATTCTCTCACGATGAGCAGAGAGCTGCGAACACGGGCTGGGGGGCGGCAGAAGATGCAAGTTCAAAATGGGGACATGACAAGTTCGATGATAAAAAAGATCGTGATCGAGAATTGCGTGCAAAAGGAAGGAAAAATAGTGATGACTTAGAAAGACATCCTAGGGAAACTAGTGGGAGGGCGAGGCAGGAAAGTAAACTGAAAGGCTGGGATGATGGTAAAGAATCAGAACTCAAGTCGAGAGAGAACCATGGTAGGAAAGACGAGAAGAGATTGAGCAGACACGATCCTGATAGCAATCGTGAACTGAAGTCGGGAGATGATCGTTATAGGAGGGAAGAGAAGAGATCTAGTAGGAACCATGATGATAGTGAGAAAGAAGATAAGAGATTGAGAAGACATGGTGATGACGATGATAAGACGAAGTTAGAAGATGATCACCATAAGAAGGAAGAAAGGAGATCGAGAAGGAACCAAGACGACGAACTCCCGCCGCATTCGAGAAGAGACTACAACAAGAGGGAAGAAGACAGGTCAAAAAGGCATGGTGACGAAGAGTATCAGCAAAAACCGAGGGAAGACGATGGTGATAGAAGGGAAAGAGATAAATCGACAAGACATCGCTCAGAATCACATAGGCGGGAAAATCCAGATGAGAAGAGGGATTCTCGATCCTCTCATGGTCGGGATCATTCTCATAGAGAAAGAAACGAAGATCGTCTGAAAAGCGATTCATCATCTTCATCACGGCTTGCCCCACGGAAGTCTTGA

Protein sequence

MIAHSRFEPAQVFGTHNSSLLLLLILAMFSVRFPLPIDNLLPPPKFFFGCAFPKPYVSDRRRFSNLRLRAADVAAPTAEEAALPAGLQKEFLPRHVAVIMDGNVRWARRMKLPDSKGHDAGVRSLREMVDLCLELDIPVLTVFAFSYDNWLRSKREVEFLMFLFERVLKSEMEKSSSKGIRLSVIGDLSLLPKSLQNLINTAVEETKSNTKLQLIVAASYSGRYDVVQACRSLARKVKNDEIQVEDIDDSLIEQELETKCTAVPHPDLLIRTSGELRISNFLLWQSAYTEFFFTETLWPDFRKQDFVEALVSYQTRQRRYGGRQRRRRRKKKKVESSLPADTENSLRALRPSSTSIPFREENPWRSFLCPRETGEDLDFDFDFDFAMNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEEEDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFDDKKDRDRELRAKGRKNSDDLERHPRETSGRARQESKLKGWDDGKESELKSRENHGRKDEKRLSRHDPDSNRELKSGDDRYRREEKRSSRNHDDSEKEDKRLRRHGDDDDKTKLEDDHHKKEERRSRRNQDDELPPHSRRDYNKREEDRSKRHGDEEYQQKPREDDGDRRERDKSTRHRSESHRRENPDEKRDSRSSHGRDHSHRERNEDRLKSDSSSSSRLAPRKS

Homology

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BLAST of Cp4.1LG16g06510 vs. ExPASy Swiss-Prot
Match: Q56Y11 (Dehydrodolichyl diphosphate synthase 2 OS=Arabidopsis thaliana OX=3702 GN=At5g58770 PE=2 SV=2)

HSP 1 Score: 306.6 bits (784), Expect = 8.1e-82
Identity = 155/272 (56.99%), Postives = 200/272 (73.53%), Query Frame = 0


Query: 55  PYVSDRRRFS-NLRLRAADVAAPTA-EEAALPAGLQKEFLPRHVAVIMDGNVRWARRMKL 114
           P   + R F   ++   +DV+   A EE  LP  L  E +P+HVA+IMDGN RWA+   L
Sbjct: 38  PKFEENRGFRFGVKSSKSDVSFTAAEEEETLPEELHAELMPKHVAIIMDGNGRWAKNRGL 97

Query: 115 PDSKGHDAGVRSLREMVDLCLELDIPVLTVFAFSYDNWLRSKREVEFLMFLFERVLKSEM 174
               GH AGV +L+E+V+LC +  I VLTVFAFS DNW+R + E++FL  LFER LK+E 
Sbjct: 98  QPWDGHRAGVEALKEIVELCGKWGIQVLTVFAFSTDNWIRPRIEIDFLFSLFERSLKTEF 157

Query: 175 EKSSSKGIRLSVIGDLSLLPKSLQNLINTAVEETKSNTKLQLIVAASYSGRYDVVQACRS 234
           +  +   +R+S+IGD S LPKSL  +IN   E TK+NT+LQLIVA  YSG+YDV+QACR 
Sbjct: 158 QNLAKNNVRISIIGDSSKLPKSLLRVINEVEEVTKNNTRLQLIVAVGYSGKYDVLQACRG 217

Query: 235 LARKVKNDEIQVEDIDDSLIEQELETKCTAVPHPDLLIRTSGELRISNFLLWQSAYTEFF 294
           +AR+VK+ EI+VE+ID+ LIE+ELET CT  P+PDLLIRTSGELR+SNFLLWQ AYTE F
Sbjct: 218 IARRVKDGEIEVEEIDERLIEEELETNCTEFPYPDLLIRTSGELRVSNFLLWQLAYTELF 277

Query: 295 FTETLWPDFRKQDFVEALVSYQTRQRRYGGRQ 325
           F + LWPDF +  F+EAL+S+Q RQRR+GGR+
Sbjct: 278 FAQELWPDFGRSGFIEALMSFQQRQRRFGGRK 309

[Close]

BLAST of Cp4.1LG16g06510 vs. ExPASy Swiss-Prot
Match: K7X479 (Dehydrodolichyl diphosphate synthase CPT5, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CPT5 PE=1 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.4e-78
Identity = 147/254 (57.87%), Postives = 192/254 (75.59%), Query Frame = 0


Query: 70  AADVAAPTAEEAALPAGLQKEFLPRHVAVIMDGNVRWARRMKLPDSKGHDAGVRSLREMV 129
           A D ++   EE  LP  L +E +P+H+AVIMDGN RWA+R  LP + G+ AG+R LR  V
Sbjct: 58  AMDESSINEEEVPLPTELSRELMPKHIAVIMDGNRRWAKRRGLPVALGYAAGIRVLRNFV 117

Query: 130 DLCLELDIPVLTVFAFSYDNWLRSKREVEFLMFLFERVLKSEMEKSSSKGIRLSVIGDLS 189
            L     I  LT+FAFS +NW R K EV+ LM LF++VLK E+E  +  GIRLS+IGD S
Sbjct: 118 KLSYNWGISALTLFAFSSENWFRPKAEVDLLMGLFDKVLKDELENLARTGIRLSIIGDAS 177

Query: 190 LLPKSLQNLINTAVEETKSNTKLQLIVAASYSGRYDVVQACRSLARKVKNDEIQVEDIDD 249
            LPKSLQ+LI+ AV  TK+N++L ++VA +YSG+YDVVQAC+++A++VK+  I+ EDI+ 
Sbjct: 178 QLPKSLQDLIDKAVMATKANSRLHILVAINYSGQYDVVQACQTIAQRVKDGNIEPEDINS 237

Query: 250 SLIEQELETKCTAVPHPDLLIRTSGELRISNFLLWQSAYTEFFFTETLWPDFRKQDFVEA 309
            L+EQEL+TKCT  P PDLLIRTSGELR+SNFLLWQ AYTE FF+ + WPDF + +F+EA
Sbjct: 238 LLVEQELQTKCTEFPSPDLLIRTSGELRLSNFLLWQLAYTELFFSHSQWPDFGEAEFLEA 297

Query: 310 LVSYQTRQRRYGGR 324
           L S+Q RQRRYGG+
Sbjct: 298 LCSFQQRQRRYGGQ 311

[Close]

BLAST of Cp4.1LG16g06510 vs. ExPASy Swiss-Prot
Match: K4D3U9 (Cis-prenyltransferase 4, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CPT4 PE=2 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 5.5e-78
Identity = 144/245 (58.78%), Postives = 194/245 (79.18%), Query Frame = 0


Query: 77  TAEEAALPAGLQKEFLPRHVAVIMDGNVRWARRMKLPDSKGHDAGVRSLREMVDLCLELD 136
           +AEE +LP  L++E +P+HVA+IMDGN RWA+   LP + G++AG+R++R++++LC    
Sbjct: 60  SAEEVSLPPQLRRELMPKHVALIMDGNRRWAKMRGLPVALGYEAGIRAVRKIIELCGNWG 119

Query: 137 IPVLTVFAFSYDNWLRSKREVEFLMFLFERVLKSEMEKSSSKGIRLSVIGDLSLLPKSLQ 196
           I VLT+FAFS DNWLR K EV+ LM LFER L  E+E  + +GIR+S+IGD S LPKSLQ
Sbjct: 120 IMVLTLFAFSSDNWLRPKVEVDILMSLFERALNDELENFAREGIRISIIGDSSKLPKSLQ 179

Query: 197 NLINTAVEETKSNTKLQLIVAASYSGRYDVVQACRSLARKVKNDEIQVEDIDDSLIEQEL 256
           +LI  AV+ TK N++L L+VA +YSG++DVVQAC+++A+KVK+D I+ +DI+  LIEQEL
Sbjct: 180 DLIAKAVKTTKENSRLHLVVAVNYSGQHDVVQACQTIAQKVKDDIIETKDINSFLIEQEL 239

Query: 257 ETKCTAVPHPDLLIRTSGELRISNFLLWQSAYTEFFFTETLWPDFRKQDFVEALVSYQTR 316
           +T C   P PDLLIRTSGELR+SNFLLWQ AY+E FF+ + WPDF + +F+EAL S+Q R
Sbjct: 240 QTNCIDFPCPDLLIRTSGELRLSNFLLWQLAYSELFFSHSHWPDFGEAEFLEALCSFQQR 299

Query: 317 QRRYG 322
           QRRYG
Sbjct: 300 QRRYG 304

[Close]

BLAST of Cp4.1LG16g06510 vs. ExPASy Swiss-Prot
Match: Q10B98 (Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0826400 PE=2 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 7.1e-78
Identity = 178/320 (55.62%), Postives = 224/320 (70.00%), Query Frame = 0


Query: 387 MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 446
           MNPLT VKR Q IN +EA LGI E+ SWHAK+KDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTQVKRTQVINQKEALLGIGEDGSWHAKFKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 447 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE 506
           E+VDVNLVRDKGTGKSKGFAF+AYEDQRSTILAVDNLNGA++LGRI+RVDHV+KYKKKEE
Sbjct: 61  EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIVRVDHVSKYKKKEE 120

Query: 507 EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 566
           EDEE  QKKREARGVC AFQ+GEC RGA C++SHDEQR ANTGWG+ E++ ++W HD+  
Sbjct: 121 EDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNANTGWGSKEESKARWEHDRHH 180

Query: 567 DKKDRDREL-RAKGRKNSDDLERHPRETSGRARQESKLKGWDDGKESELKSRENHGRKDE 626
           +     ++   + G +   D  +   +++GR  Q S+ + + D ++S L+   + G KD 
Sbjct: 181 EPPMSHKKFPSSAGEQRFPDRAKEENKSTGREGQSSRSEAYKD-RDSRLR-HSDRGSKDH 240

Query: 627 KRLSRHDPDSNRELKSGDDRYRREEKRSSRNHDDSEKEDKRLRRHGDDDDKTKLEDDHHK 686
            R  RHD    R   S  DR R  ++ +    + SE+    ++    D  +++ + D   
Sbjct: 241 DRY-RHDRSPER---SRGDRQRNNDRYAQGRDEKSERYRSEVKHDEGDQKRSRRDTDSSG 300

Query: 687 KEERRSRRNQDDELPPHSRR 706
             ERR   N+D E    SRR
Sbjct: 301 HYERRG--NEDSERYRKSRR 312

[Close]

BLAST of Cp4.1LG16g06510 vs. ExPASy Swiss-Prot
Match: Q9SD61 (Zinc finger CCCH domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=At3g47120 PE=2 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 1.0e-71
Identity = 188/370 (50.81%), Postives = 235/370 (63.51%), Query Frame = 0


Query: 387 MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 446
           MNPLT VK +QKIN++E+ LGIS+EASWHAKYK+SAYV+VGGIP+DLTEGDLLAVF+QYG
Sbjct: 1   MNPLTQVKNLQKINARESDLGISDEASWHAKYKNSAYVYVGGIPFDLTEGDLLAVFSQYG 60

Query: 447 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE 506
           EIVDVNL+RDKGTGKSKGFAF+AYEDQRSTILAVDNLNGA +LGR I+VDH   YKK EE
Sbjct: 61  EIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGALVLGRTIKVDHCGAYKKHEE 120

Query: 507 EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 566
           EDEET ++ REARGVCRAFQRGECTRG  CKFSHDE+RAANTGWG  ED SSKW HDK  
Sbjct: 121 EDEETRRQNREARGVCRAFQRGECTRGDSCKFSHDEKRAANTGWGHEEDRSSKWDHDKNR 180

Query: 567 DKK------DRDRELRAKGRKNSDDLERHPRETSGRARQESKLKGWDDGK-ESELKSREN 626
           + +       R    R    K S D +R    T+G   +E +   WD  K     K   +
Sbjct: 181 EGRGVCRAFQRGECTRGDSCKFSHDEKR--AATTGWGHEEDRSSKWDQDKLNGAKKGGTS 240

Query: 627 HGRKDEKRLSRHDPDSNRELKSGDDRYRREEKRSSRNHDDSEKEDKRLRRHGDDDDKTKL 686
            G + + +    +  S R    GD  Y R ++R        E+ D+       +D   + 
Sbjct: 241 FGNRGDFKPDVEE-KSYRGRGDGDASYGRPKER--------ERVDR-------EDMGPRS 300

Query: 687 EDDHHKKEERRSRRNQDDELPPHSRRDYNKREEDRSKRHGDEEYQQKPREDDGDRRERDK 746
            D +  KE++RS R  +     H+      RE+  S+    E+ + + R D  DR E+D+
Sbjct: 301 RDAYDMKEQKRSGRYDNAYSRRHNDEIDYVREDKGSRAQDWEKRKAESRRDRNDREEKDR 352

Query: 747 STRHRSESHR 750
            +  R +  R
Sbjct: 361 DSLRREDRRR 352

[Close]

BLAST of Cp4.1LG16g06510 vs. NCBI nr
Match: XP_023512686.1 (zinc finger CCCH domain-containing protein 25 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 727 bits (1876), Expect = 6.77e-257
Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 0


Query: 387 MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 446
           MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 447 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE 506
           EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE
Sbjct: 61  EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE 120

Query: 507 EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 566
           EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180

Query: 567 DKKDRDRELRAKGRKNSDDLERHPRETSGRARQESKLKGWDDGKESELKSRENHGRKDEK 626
           DKKDRDRELRAKGRKNSDDLERHPRETSGRARQESKLKGWDDGKESELKSRENHGRKDEK
Sbjct: 181 DKKDRDRELRAKGRKNSDDLERHPRETSGRARQESKLKGWDDGKESELKSRENHGRKDEK 240

Query: 627 RLSRHDPDSNRELKSGDDRYRREEKRSSRNHDDSEKEDKRLRRHGDDDDKTKLEDDHHKK 686
           RLSRHDPDSNRELKSGDDRYRREEKRSSRNHDDSEKEDKRLRRHGDDDDKTKLEDDHHKK
Sbjct: 241 RLSRHDPDSNRELKSGDDRYRREEKRSSRNHDDSEKEDKRLRRHGDDDDKTKLEDDHHKK 300

Query: 687 EERRSRRNQDDELPPHSRRDYNKREEDRSKRHGDEEYQQKPREDDGDRRERDKSTRHRSE 746
           EERRSRRNQDDELPPHSRRDYNKREEDRSKRHGDEEYQQKPREDDGDRRERDKSTRHRSE
Sbjct: 301 EERRSRRNQDDELPPHSRRDYNKREEDRSKRHGDEEYQQKPREDDGDRRERDKSTRHRSE 360

Query: 747 SHRRENPDEKRDSRSSHGRDHSHRERNEDR 776
           SHRRENPDEKRDSRSSHGRDHSHRERNEDR
Sbjct: 361 SHRRENPDEKRDSRSSHGRDHSHRERNEDR 390

[Close]

BLAST of Cp4.1LG16g06510 vs. NCBI nr
Match: KAG6570659.1 (Zinc finger CCCH domain-containing protein 42, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 710 bits (1833), Expect = 2.26e-250
Identity = 381/390 (97.69%), Postives = 385/390 (98.72%), Query Frame = 0


Query: 387 MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 446
           MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 447 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE 506
           EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE
Sbjct: 61  EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE 120

Query: 507 EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 566
           EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180

Query: 567 DKKDRDRELRAKGRKNSDDLERHPRETSGRARQESKLKGWDDGKESELKSRENHGRKDEK 626
           DKKDRDRELRAKGRKNSDDLERHPRE SGRARQESKLKGWDDGK+SELK RENHGRKDEK
Sbjct: 181 DKKDRDRELRAKGRKNSDDLERHPREISGRARQESKLKGWDDGKKSELKLRENHGRKDEK 240

Query: 627 RLSRHDPDSNRELKSGDDRYRREEKRSSRNHDDSEKEDKRLRRHGDDDDKTKLEDDHHKK 686
           R+SRHDPDSNRELKSGDDRY+REEKRS RNHDDSEKE+KRLRRHGDDDDKTKLEDDHHKK
Sbjct: 241 RMSRHDPDSNRELKSGDDRYKREEKRSRRNHDDSEKEEKRLRRHGDDDDKTKLEDDHHKK 300

Query: 687 EERRSRRNQDDELPPHSRRDYNKREEDRSKRHGDEEYQQKPREDDGDRRERDKSTRHRSE 746
           EERRSRRNQDDELPPHSRRDYN REEDRSKRHGDEEYQQKPREDD DRRERDKSTRHRSE
Sbjct: 301 EERRSRRNQDDELPPHSRRDYNTREEDRSKRHGDEEYQQKPREDDDDRRERDKSTRHRSE 360

Query: 747 SHRRENPDEKRDSRSSHGRDHSHRERNEDR 776
           SHRRENPDEKRDSRSSHGRDHSHRERNEDR
Sbjct: 361 SHRRENPDEKRDSRSSHGRDHSHRERNEDR 390

[Close]

BLAST of Cp4.1LG16g06510 vs. NCBI nr
Match: XP_022944591.1 (zinc finger CCCH domain-containing protein 25 [Cucurbita moschata])

HSP 1 Score: 707 bits (1826), Expect = 2.61e-249
Identity = 380/389 (97.69%), Postives = 384/389 (98.71%), Query Frame = 0


Query: 387 MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 446
           MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 447 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE 506
           EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE
Sbjct: 61  EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE 120

Query: 507 EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 566
           EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180

Query: 567 DKKDRDRELRAKGRKNSDDLERHPRETSGRARQESKLKGWDDGKESELKSRENHGRKDEK 626
           DKKDRDRELRAKGRKNSDDLERHPRE SGRARQESKLKGWDDGKESELKSRENHGRKDEK
Sbjct: 181 DKKDRDRELRAKGRKNSDDLERHPREISGRARQESKLKGWDDGKESELKSRENHGRKDEK 240

Query: 627 RLSRHDPDSNRELKSGDDRYRREEKRSSRNHDDSEKEDKRLRRHGDDDDKTKLEDDHHKK 686
           R+SRHDPDSNRELKSGDDRY+REEKRS RNHDDSEKE+KRLRRHGDDDDKTKLEDDH KK
Sbjct: 241 RMSRHDPDSNRELKSGDDRYKREEKRSRRNHDDSEKEEKRLRRHGDDDDKTKLEDDHDKK 300

Query: 687 EERRSRRNQDDELPPHSRRDYNKREEDRSKRHGDEEYQQKPREDDGDRRERDKSTRHRSE 746
           EERRSRRNQDDELPPHSRRDYN REEDRSKRHGDEEYQQKPRED+ DRRERDKSTRHRSE
Sbjct: 301 EERRSRRNQDDELPPHSRRDYNSREEDRSKRHGDEEYQQKPREDNDDRRERDKSTRHRSE 360

Query: 747 SHRRENPDEKRDSRSSHGRDHSHRERNED 775
           SHRRENPDEKRDSRSSHGRDHSHRERNED
Sbjct: 361 SHRRENPDEKRDSRSSHGRDHSHRERNED 389

[Close]

BLAST of Cp4.1LG16g06510 vs. NCBI nr
Match: KAG7010507.1 (Zinc finger CCCH domain-containing protein 42, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 707 bits (1824), Expect = 4.86e-249
Identity = 380/390 (97.44%), Postives = 383/390 (98.21%), Query Frame = 0


Query: 387 MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 446
           MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 447 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE 506
           EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE
Sbjct: 61  EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE 120

Query: 507 EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 566
           EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180

Query: 567 DKKDRDRELRAKGRKNSDDLERHPRETSGRARQESKLKGWDDGKESELKSRENHGRKDEK 626
           DKKDRDRELRAKGRKNSDDLERHPRE SGRARQESKLKGWDDGKESELKSRENHGRKDEK
Sbjct: 181 DKKDRDRELRAKGRKNSDDLERHPREISGRARQESKLKGWDDGKESELKSRENHGRKDEK 240

Query: 627 RLSRHDPDSNRELKSGDDRYRREEKRSSRNHDDSEKEDKRLRRHGDDDDKTKLEDDHHKK 686
           R+SRHDPDSNRELK GDDRY+REEKRS RNHDDSEKE+ RLRRHGDDDDKTKLEDDHHKK
Sbjct: 241 RMSRHDPDSNRELKLGDDRYKREEKRSRRNHDDSEKEETRLRRHGDDDDKTKLEDDHHKK 300

Query: 687 EERRSRRNQDDELPPHSRRDYNKREEDRSKRHGDEEYQQKPREDDGDRRERDKSTRHRSE 746
           EERRSRRNQDDELPPHSRRDYN REEDRSKRHGDEEYQQKPRED  DRRERDKSTRHRSE
Sbjct: 301 EERRSRRNQDDELPPHSRRDYNTREEDRSKRHGDEEYQQKPREDGDDRRERDKSTRHRSE 360

Query: 747 SHRRENPDEKRDSRSSHGRDHSHRERNEDR 776
           SHRRENPDEKRDSRSSHGRDHSHRERNEDR
Sbjct: 361 SHRRENPDEKRDSRSSHGRDHSHRERNEDR 390

[Close]

BLAST of Cp4.1LG16g06510 vs. NCBI nr
Match: XP_022986885.1 (zinc finger CCCH domain-containing protein 25 [Cucurbita maxima])

HSP 1 Score: 692 bits (1785), Expect = 4.15e-243
Identity = 373/390 (95.64%), Postives = 383/390 (98.21%), Query Frame = 0


Query: 387 MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 446
           MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 447 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE 506
           EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE
Sbjct: 61  EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE 120

Query: 507 EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 566
           EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180

Query: 567 DKKDRDRELRAKGRKNSDDLERHPRETSGRARQESKLKGWDDGKESELKSRENHGRKDEK 626
           DKKDRDRELRAKGRKNSDD ER+PRE SGRARQESKLKGWDDGKESELKSRENHGRKDEK
Sbjct: 181 DKKDRDRELRAKGRKNSDDFERNPREISGRARQESKLKGWDDGKESELKSRENHGRKDEK 240

Query: 627 RLSRHDPDSNRELKSGDDRYRREEKRSSRNHDDSEKEDKRLRRHGDDDDKTKLEDDHHKK 686
           RLSRHDPD+NRELKSGDD Y+REEKRS RNHDDSEKE+KRLRRHGDDDDKTKLED+HHK 
Sbjct: 241 RLSRHDPDNNRELKSGDDHYKREEKRSRRNHDDSEKEEKRLRRHGDDDDKTKLEDEHHK- 300

Query: 687 EERRSRRNQDDELPPHSRRDYNKREEDRSKRHGDEEYQQKPREDDGDRRERDKSTRHRSE 746
           EERRSRRNQDDELPPHSRRDYN REED+SKRHGDEE+Q+KPRED+ DRRERDKSTRHRSE
Sbjct: 301 EERRSRRNQDDELPPHSRRDYNTREEDKSKRHGDEEFQKKPREDEDDRRERDKSTRHRSE 360

Query: 747 SHRRENPDEKRDSRSSHGRDHSHRERNEDR 776
           SHRRENPDEKRDSRSS+GRDHSHRERNEDR
Sbjct: 361 SHRRENPDEKRDSRSSYGRDHSHRERNEDR 389

[Close]

BLAST of Cp4.1LG16g06510 vs. ExPASy TrEMBL
Match: A0A6J1FUU2 (zinc finger CCCH domain-containing protein 25 OS=Cucurbita moschata OX=3662 GN=LOC111449004 PE=4 SV=1)

HSP 1 Score: 707 bits (1826), Expect = 1.26e-249
Identity = 380/389 (97.69%), Postives = 384/389 (98.71%), Query Frame = 0


Query: 387 MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 446
           MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 447 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE 506
           EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE
Sbjct: 61  EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE 120

Query: 507 EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 566
           EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180

Query: 567 DKKDRDRELRAKGRKNSDDLERHPRETSGRARQESKLKGWDDGKESELKSRENHGRKDEK 626
           DKKDRDRELRAKGRKNSDDLERHPRE SGRARQESKLKGWDDGKESELKSRENHGRKDEK
Sbjct: 181 DKKDRDRELRAKGRKNSDDLERHPREISGRARQESKLKGWDDGKESELKSRENHGRKDEK 240

Query: 627 RLSRHDPDSNRELKSGDDRYRREEKRSSRNHDDSEKEDKRLRRHGDDDDKTKLEDDHHKK 686
           R+SRHDPDSNRELKSGDDRY+REEKRS RNHDDSEKE+KRLRRHGDDDDKTKLEDDH KK
Sbjct: 241 RMSRHDPDSNRELKSGDDRYKREEKRSRRNHDDSEKEEKRLRRHGDDDDKTKLEDDHDKK 300

Query: 687 EERRSRRNQDDELPPHSRRDYNKREEDRSKRHGDEEYQQKPREDDGDRRERDKSTRHRSE 746
           EERRSRRNQDDELPPHSRRDYN REEDRSKRHGDEEYQQKPRED+ DRRERDKSTRHRSE
Sbjct: 301 EERRSRRNQDDELPPHSRRDYNSREEDRSKRHGDEEYQQKPREDNDDRRERDKSTRHRSE 360

Query: 747 SHRRENPDEKRDSRSSHGRDHSHRERNED 775
           SHRRENPDEKRDSRSSHGRDHSHRERNED
Sbjct: 361 SHRRENPDEKRDSRSSHGRDHSHRERNED 389

[Close]

BLAST of Cp4.1LG16g06510 vs. ExPASy TrEMBL
Match: A0A6J1JFA2 (zinc finger CCCH domain-containing protein 25 OS=Cucurbita maxima OX=3661 GN=LOC111484487 PE=4 SV=1)

HSP 1 Score: 692 bits (1785), Expect = 2.01e-243
Identity = 373/390 (95.64%), Postives = 383/390 (98.21%), Query Frame = 0


Query: 387 MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 446
           MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 447 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE 506
           EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE
Sbjct: 61  EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE 120

Query: 507 EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 566
           EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180

Query: 567 DKKDRDRELRAKGRKNSDDLERHPRETSGRARQESKLKGWDDGKESELKSRENHGRKDEK 626
           DKKDRDRELRAKGRKNSDD ER+PRE SGRARQESKLKGWDDGKESELKSRENHGRKDEK
Sbjct: 181 DKKDRDRELRAKGRKNSDDFERNPREISGRARQESKLKGWDDGKESELKSRENHGRKDEK 240

Query: 627 RLSRHDPDSNRELKSGDDRYRREEKRSSRNHDDSEKEDKRLRRHGDDDDKTKLEDDHHKK 686
           RLSRHDPD+NRELKSGDD Y+REEKRS RNHDDSEKE+KRLRRHGDDDDKTKLED+HHK 
Sbjct: 241 RLSRHDPDNNRELKSGDDHYKREEKRSRRNHDDSEKEEKRLRRHGDDDDKTKLEDEHHK- 300

Query: 687 EERRSRRNQDDELPPHSRRDYNKREEDRSKRHGDEEYQQKPREDDGDRRERDKSTRHRSE 746
           EERRSRRNQDDELPPHSRRDYN REED+SKRHGDEE+Q+KPRED+ DRRERDKSTRHRSE
Sbjct: 301 EERRSRRNQDDELPPHSRRDYNTREEDKSKRHGDEEFQKKPREDEDDRRERDKSTRHRSE 360

Query: 747 SHRRENPDEKRDSRSSHGRDHSHRERNEDR 776
           SHRRENPDEKRDSRSS+GRDHSHRERNEDR
Sbjct: 361 SHRRENPDEKRDSRSSYGRDHSHRERNEDR 389

[Close]

BLAST of Cp4.1LG16g06510 vs. ExPASy TrEMBL
Match: A0A6J1FRM6 (Alkyl transferase OS=Cucurbita moschata OX=3662 GN=LOC111448184 PE=3 SV=1)

HSP 1 Score: 577 bits (1488), Expect = 6.10e-200
Identity = 294/297 (98.99%), Postives = 295/297 (99.33%), Query Frame = 0


Query: 28  MFSVRFPLPIDNLLPPPKFFFGCAFPKPYVSDRRRFSNLRLRAADVAAPTAEEAALPAGL 87
           MFSVRFPLPIDNLLPPPKF FGCAFPKPYVSDRRRFSNLRLRAADVAAPTAEEAALPAGL
Sbjct: 1   MFSVRFPLPIDNLLPPPKFVFGCAFPKPYVSDRRRFSNLRLRAADVAAPTAEEAALPAGL 60

Query: 88  QKEFLPRHVAVIMDGNVRWARRMKLPDSKGHDAGVRSLREMVDLCLELDIPVLTVFAFSY 147
           QKEFLPRHVAVIMDGNVRWARRMKLPDSKGHDAGVRSLREMVDLCLELDIPVLTVFAFSY
Sbjct: 61  QKEFLPRHVAVIMDGNVRWARRMKLPDSKGHDAGVRSLREMVDLCLELDIPVLTVFAFSY 120

Query: 148 DNWLRSKREVEFLMFLFERVLKSEMEKSSSKGIRLSVIGDLSLLPKSLQNLINTAVEETK 207
           DNWLRSKREV+FLMFLFERVLKSEMEKSSSKGIRLSVIGDLSLLPKSLQ LINTAVEETK
Sbjct: 121 DNWLRSKREVDFLMFLFERVLKSEMEKSSSKGIRLSVIGDLSLLPKSLQKLINTAVEETK 180

Query: 208 SNTKLQLIVAASYSGRYDVVQACRSLARKVKNDEIQVEDIDDSLIEQELETKCTAVPHPD 267
           SNTKLQLIVAASYSGRYDVVQACRSLARKVKNDEIQVEDIDDSLIEQELETKCTAVPHPD
Sbjct: 181 SNTKLQLIVAASYSGRYDVVQACRSLARKVKNDEIQVEDIDDSLIEQELETKCTAVPHPD 240

Query: 268 LLIRTSGELRISNFLLWQSAYTEFFFTETLWPDFRKQDFVEALVSYQTRQRRYGGRQ 324
           LLIRTSGELRISNFLLWQSAYTEFFFTETLWPDFRKQDFVEALVSYQTRQRRYGGRQ
Sbjct: 241 LLIRTSGELRISNFLLWQSAYTEFFFTETLWPDFRKQDFVEALVSYQTRQRRYGGRQ 297

[Close]

BLAST of Cp4.1LG16g06510 vs. ExPASy TrEMBL
Match: A0A6J1JCL9 (Alkyl transferase OS=Cucurbita maxima OX=3661 GN=LOC111484510 PE=3 SV=1)

HSP 1 Score: 575 bits (1481), Expect = 6.99e-199
Identity = 292/297 (98.32%), Postives = 294/297 (98.99%), Query Frame = 0


Query: 28  MFSVRFPLPIDNLLPPPKFFFGCAFPKPYVSDRRRFSNLRLRAADVAAPTAEEAALPAGL 87
           MFSVRFPLPIDNL+PPPKF FGCAFPKPYVSDRRRFSNLRLRAADVAAPTAEEAALPAGL
Sbjct: 1   MFSVRFPLPIDNLIPPPKFVFGCAFPKPYVSDRRRFSNLRLRAADVAAPTAEEAALPAGL 60

Query: 88  QKEFLPRHVAVIMDGNVRWARRMKLPDSKGHDAGVRSLREMVDLCLELDIPVLTVFAFSY 147
           QKEFLPRHVAVIMDGNVRWARRMKLPDSKGHDAGVRSLREMVDLCLELDIPVLTVFAFSY
Sbjct: 61  QKEFLPRHVAVIMDGNVRWARRMKLPDSKGHDAGVRSLREMVDLCLELDIPVLTVFAFSY 120

Query: 148 DNWLRSKREVEFLMFLFERVLKSEMEKSSSKGIRLSVIGDLSLLPKSLQNLINTAVEETK 207
           DNWLRSKREV+FLMFLFERVLKSEMEKSS KGIRLSVIGDLSLLPKSLQ LINTAVEETK
Sbjct: 121 DNWLRSKREVDFLMFLFERVLKSEMEKSSRKGIRLSVIGDLSLLPKSLQKLINTAVEETK 180

Query: 208 SNTKLQLIVAASYSGRYDVVQACRSLARKVKNDEIQVEDIDDSLIEQELETKCTAVPHPD 267
           SNTKLQLIVAASYSGRYDVVQACRSLARKVKNDEIQVEDIDDSLIEQELETKCTAVPHPD
Sbjct: 181 SNTKLQLIVAASYSGRYDVVQACRSLARKVKNDEIQVEDIDDSLIEQELETKCTAVPHPD 240

Query: 268 LLIRTSGELRISNFLLWQSAYTEFFFTETLWPDFRKQDFVEALVSYQTRQRRYGGRQ 324
           LLIRTSGELRISNFLLWQSAYTEFFFTETLWPDFRKQDFVEALVSYQTRQRRYGGRQ
Sbjct: 241 LLIRTSGELRISNFLLWQSAYTEFFFTETLWPDFRKQDFVEALVSYQTRQRRYGGRQ 297

[Close]

BLAST of Cp4.1LG16g06510 vs. ExPASy TrEMBL
Match: A0A0A0KZW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308540 PE=4 SV=1)

HSP 1 Score: 571 bits (1472), Expect = 5.66e-196
Identity = 324/395 (82.03%), Postives = 353/395 (89.37%), Query Frame = 0


Query: 387 MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 446
           MNPLTLVKRIQKINSQEA+LGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 447 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE 506
           EIVDVNL+RDKGTGKSKG+AFVAYEDQRST LAVDNLNGAQILGRI+RVDHV+KYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120

Query: 507 EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 566
           EDEE EQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAA+TGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180

Query: 567 DKKDRDRELRAKGRKNSDDLERHPRETSGRARQESKLKGWDDGKESELKSRENHGRKDEK 626
            +K+ D+EL AKGRK SD+L RHPRETSG  RQE++ +GWDD KESELKSRE+HG KDEK
Sbjct: 181 SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHGGKDEK 240

Query: 627 RLSRHDPDSNRELKSGDDRYRREEKRSSRNHDDSEKEDKRLRRHGDDDDKTKLEDDHHKK 686
           R  R+D D N + KSGDD+Y+ EEKRSSRNHDD+ K++KR R+H D+DD+ KLEDD ++K
Sbjct: 241 RSRRYDLDGNSDPKSGDDQYKGEEKRSSRNHDDNRKDEKRSRKH-DNDDEMKLEDDRYRK 300

Query: 687 EERRSRRNQDDELPPHSRRDYNKREEDRS-KRHGDEEYQQKPREDDGDRRERDKSTRHRS 746
           EE R RRNQD+ELP HSRRDY  REEDRS KRHGD+EY  K REDD  RRERD S RHRS
Sbjct: 301 EENRYRRNQDNELPQHSRRDYKTREEDRSSKRHGDKEYPPKLREDDK-RRERDVSVRHRS 360

Query: 747 ESHRRENPDEKRDSRSSHG-RD---HSHRERNEDR 776
           ES+RRENPDEKRD RSSHG RD   HSHRERNEDR
Sbjct: 361 ESYRRENPDEKRDYRSSHGGRDSSSHSHRERNEDR 393

[Close]

BLAST of Cp4.1LG16g06510 vs. TAIR 10
Match: AT5G58770.1 (Undecaprenyl pyrophosphate synthetase family protein )

HSP 1 Score: 306.6 bits (784), Expect = 5.8e-83
Identity = 155/272 (56.99%), Postives = 200/272 (73.53%), Query Frame = 0


Query: 55  PYVSDRRRFS-NLRLRAADVAAPTA-EEAALPAGLQKEFLPRHVAVIMDGNVRWARRMKL 114
           P   + R F   ++   +DV+   A EE  LP  L  E +P+HVA+IMDGN RWA+   L
Sbjct: 38  PKFEENRGFRFGVKSSKSDVSFTAAEEEETLPEELHAELMPKHVAIIMDGNGRWAKNRGL 97

Query: 115 PDSKGHDAGVRSLREMVDLCLELDIPVLTVFAFSYDNWLRSKREVEFLMFLFERVLKSEM 174
               GH AGV +L+E+V+LC +  I VLTVFAFS DNW+R + E++FL  LFER LK+E 
Sbjct: 98  QPWDGHRAGVEALKEIVELCGKWGIQVLTVFAFSTDNWIRPRIEIDFLFSLFERSLKTEF 157

Query: 175 EKSSSKGIRLSVIGDLSLLPKSLQNLINTAVEETKSNTKLQLIVAASYSGRYDVVQACRS 234
           +  +   +R+S+IGD S LPKSL  +IN   E TK+NT+LQLIVA  YSG+YDV+QACR 
Sbjct: 158 QNLAKNNVRISIIGDSSKLPKSLLRVINEVEEVTKNNTRLQLIVAVGYSGKYDVLQACRG 217

Query: 235 LARKVKNDEIQVEDIDDSLIEQELETKCTAVPHPDLLIRTSGELRISNFLLWQSAYTEFF 294
           +AR+VK+ EI+VE+ID+ LIE+ELET CT  P+PDLLIRTSGELR+SNFLLWQ AYTE F
Sbjct: 218 IARRVKDGEIEVEEIDERLIEEELETNCTEFPYPDLLIRTSGELRVSNFLLWQLAYTELF 277

Query: 295 FTETLWPDFRKQDFVEALVSYQTRQRRYGGRQ 325
           F + LWPDF +  F+EAL+S+Q RQRR+GGR+
Sbjct: 278 FAQELWPDFGRSGFIEALMSFQQRQRRFGGRK 309

[Close]

BLAST of Cp4.1LG16g06510 vs. TAIR 10
Match: AT3G47120.1 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 273.1 bits (697), Expect = 7.1e-73
Identity = 188/370 (50.81%), Postives = 235/370 (63.51%), Query Frame = 0


Query: 387 MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 446
           MNPLT VK +QKIN++E+ LGIS+EASWHAKYK+SAYV+VGGIP+DLTEGDLLAVF+QYG
Sbjct: 1   MNPLTQVKNLQKINARESDLGISDEASWHAKYKNSAYVYVGGIPFDLTEGDLLAVFSQYG 60

Query: 447 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTILAVDNLNGAQILGRIIRVDHVTKYKKKEE 506
           EIVDVNL+RDKGTGKSKGFAF+AYEDQRSTILAVDNLNGA +LGR I+VDH   YKK EE
Sbjct: 61  EIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGALVLGRTIKVDHCGAYKKHEE 120

Query: 507 EDEETEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 566
           EDEET ++ REARGVCRAFQRGECTRG  CKFSHDE+RAANTGWG  ED SSKW HDK  
Sbjct: 121 EDEETRRQNREARGVCRAFQRGECTRGDSCKFSHDEKRAANTGWGHEEDRSSKWDHDKNR 180

Query: 567 DKK------DRDRELRAKGRKNSDDLERHPRETSGRARQESKLKGWDDGK-ESELKSREN 626
           + +       R    R    K S D +R    T+G   +E +   WD  K     K   +
Sbjct: 181 EGRGVCRAFQRGECTRGDSCKFSHDEKR--AATTGWGHEEDRSSKWDQDKLNGAKKGGTS 240

Query: 627 HGRKDEKRLSRHDPDSNRELKSGDDRYRREEKRSSRNHDDSEKEDKRLRRHGDDDDKTKL 686
            G + + +    +  S R    GD  Y R ++R        E+ D+       +D   + 
Sbjct: 241 FGNRGDFKPDVEE-KSYRGRGDGDASYGRPKER--------ERVDR-------EDMGPRS 300

Query: 687 EDDHHKKEERRSRRNQDDELPPHSRRDYNKREEDRSKRHGDEEYQQKPREDDGDRRERDK 746
            D +  KE++RS R  +     H+      RE+  S+    E+ + + R D  DR E+D+
Sbjct: 301 RDAYDMKEQKRSGRYDNAYSRRHNDEIDYVREDKGSRAQDWEKRKAESRRDRNDREEKDR 352

Query: 747 STRHRSESHR 750
            +  R +  R
Sbjct: 361 DSLRREDRRR 352

[Close]

BLAST of Cp4.1LG16g06510 vs. TAIR 10
Match: AT5G58782.1 (Undecaprenyl pyrophosphate synthetase family protein )

HSP 1 Score: 268.9 bits (686), Expect = 1.3e-71
Identity = 134/244 (54.92%), Postives = 178/244 (72.95%), Query Frame = 0


Query: 80  EAALPAGLQKEFLPRHVAVIMDGNVRWARRMKLPDSKGHDAGVRSLREMVDLCLELDIPV 139
           E   P  LQ+E +PRHVAVIMDGN RWA++  L  S+G++AG + L E  DLC +L I  
Sbjct: 45  EEETPKELQRELMPRHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEFADLCFKLGINT 104

Query: 140 LTVFAFSYDNWLRSKREVEFLMFLFERVLKSEMEKSSSKGIRLSVIGDLSLLPKSLQNLI 199
           ++ FAFS +NW R K EV+ LM+LF+R LKS+++   SK IR+SVIG+L+ +P+SL   +
Sbjct: 105 VSAFAFSTENWGRHKIEVKCLMYLFQRYLKSKIQFFQSKEIRVSVIGNLAKIPESLLRTV 164

Query: 200 NTAVEETKSNTKLQLIVAASYSGRYDVVQACRSLARKVKNDEIQVEDIDDSLIEQELETK 259
           +   E TKS  K  LI+A  YSGR+D++ AC+++ +K +   I+ ED+D++L E+EL+T+
Sbjct: 165 HELEEATKSYKKKHLILAIDYSGRFDILGACKNIVKKSEQGLIREEDVDETLFERELQTR 224

Query: 260 CTAVPHPDLLIRTSGELRISNFLLWQSAYTEFFFTETLWPDFRKQDFVEALVSYQTRQRR 319
           CT  P PDLLIRTSGE RISNF LWQ AYTEFFF+  LWPDF KQ F+EALVSYQ R RR
Sbjct: 225 CTEFPSPDLLIRTSGEQRISNFFLWQLAYTEFFFSPVLWPDFDKQKFIEALVSYQRRDRR 284

Query: 320 YGGR 324
           +G R
Sbjct: 285 FGSR 288

[Close]

BLAST of Cp4.1LG16g06510 vs. TAIR 10
Match: AT5G58784.1 (Undecaprenyl pyrophosphate synthetase family protein )

HSP 1 Score: 245.7 bits (626), Expect = 1.2e-64
Identity = 126/235 (53.62%), Postives = 164/235 (69.79%), Query Frame = 0


Query: 89  KEFLPRHVAVIMDGNVRWARRMKLPDSKGHDAGVRSLREMVDLCLELDIPVLTVFAFSYD 148
           +  +P+HVAVI+DGN RWA +  L  S+GH+AG R L E    C  +    +++FAFS +
Sbjct: 67  RNIMPKHVAVILDGNRRWAEKRGLGTSEGHEAGARRLMENAKDCFAMGTNTISLFAFSTE 126

Query: 149 NWLRSKREVEFLMFLFERVLKSEMEKSSSKGIRLSVIGDLSLLPKSLQNLINTAVEETKS 208
           NW R + EV+ LM LFE+ L S+M    S  I++SVIG+ + LP+SL  LI    E TKS
Sbjct: 127 NWERPEDEVKCLMALFEKYLASDMPYLRSDKIKISVIGNRTKLPESLLGLIEEVEEATKS 186

Query: 209 NTKLQLIVAASYSGRYDVVQACRSLARKVKNDEIQVEDIDDSLIEQELETKCTAVPHPDL 268
                LI+A  YSGRYD++QAC+SLA KVK+  IQVEDI++  +E+EL TKC+  P+PDL
Sbjct: 187 YEGKNLIIAIDYSGRYDILQACKSLANKVKDGLIQVEDINEKAMEKELLTKCSEFPNPDL 246

Query: 269 LIRTSGELRISNFLLWQSAYTEFFFTETLWPDFRKQDFVEALVSYQTRQRRYGGR 324
           LIRTSGE RISNF LWQSAYTE +F   LWPDF + +++EAL  YQ RQRR+G R
Sbjct: 247 LIRTSGEQRISNFFLWQSAYTELYFPTVLWPDFGEAEYLEALTWYQQRQRRFGRR 301

[Close]

BLAST of Cp4.1LG16g06510 vs. TAIR 10
Match: AT5G58780.1 (Undecaprenyl pyrophosphate synthetase family protein )

HSP 1 Score: 244.2 bits (622), Expect = 3.5e-64
Identity = 138/306 (45.10%), Postives = 189/306 (61.76%), Query Frame = 0


Query: 21  LLLLILAMFSVRFPLPIDNLLPPPKFFFGCAFPKPYVSDRRRFSNLRLRAADVAAPTAEE 80
           +L ++ ++ S+ F   I        F+F  + PK        F  +     D      +E
Sbjct: 1   MLSILSSLLSLLFLFIISCFFITSHFWFPLSLPKIL-----GFIKITSSRDDYDNEQRDE 60

Query: 81  AALPAG---LQKEFLPRHVAVIMDGNVRWARRMKLPDSKGHDAGVRSLREMVDLCLELDI 140
                G   LQ+E +PRHVAVIMDGN RWA+R  L  S+GH+AG + L E  +LC +L I
Sbjct: 61  GTYVVGVEELQRELMPRHVAVIMDGNRRWAKRAGLLTSQGHEAGAKRLIEFSELCFKLGI 120

Query: 141 PVLTVFAFSYDNWLRSKREVEFLMFLFERVLKSEMEKSSSKGIRLSVIGDLSLLPKSLQN 200
             ++ FAFS +NW R K EV+ LM L +  LKS+++    +  R+SVIG+L+ +P+SL  
Sbjct: 121 HTVSAFAFSTENWGRHKIEVKCLMSLIQHYLKSKIQYFQREETRVSVIGNLTKIPESLLR 180

Query: 201 LINTAVEETKSNTKLQLIVAASYSGRYDVVQACRSLARKVKNDEIQVEDIDDSLIEQELE 260
            +    E T+S  K  LI+A  YSGR D+++AC+S+ +K +   I+ ED+D++LIE+EL 
Sbjct: 181 TVQEIEEATRSYKKKHLILAIDYSGRLDILRACKSIVKKSEKGLIREEDVDEALIERELL 240

Query: 261 TKCTAVPHPDLLIRTSGELRISNFLLWQSAYTEFFFTETLWPDFRKQDFVEALVSYQTRQ 320
           T CT  P PDLLIRTSGE RISNF LWQ AYTE FF+  LWPDF K   +EALVSYQ R+
Sbjct: 241 TNCTEFPSPDLLIRTSGEQRISNFFLWQLAYTELFFSPVLWPDFDKDKLLEALVSYQRRE 300

Query: 321 RRYGGR 324
           RR+G R
Sbjct: 301 RRFGCR 301

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g06510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56Y11	8.1e-82	56.99	Dehydrodolichyl diphosphate synthase 2 OS=Arabidopsis thaliana OX=3702 GN=At5g58...	[more]
K7X479	1.4e-78	57.87	Dehydrodolichyl diphosphate synthase CPT5, chloroplastic OS=Solanum lycopersicum...	[more]
K4D3U9	5.5e-78	58.78	Cis-prenyltransferase 4, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CPT4 P...	[more]
Q10B98	7.1e-78	55.63	Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica OX...	[more]
Q9SD61	1.0e-71	50.81	Zinc finger CCCH domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Cp4.1LG16g06510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512686.1	6.77e-257	100.00	zinc finger CCCH domain-containing protein 25 [Cucurbita pepo subsp. pepo]	[more]
KAG6570659.1	2.26e-250	97.69	Zinc finger CCCH domain-containing protein 42, partial [Cucurbita argyrosperma s...	[more]
XP_022944591.1	2.61e-249	97.69	zinc finger CCCH domain-containing protein 25 [Cucurbita moschata]	[more]
KAG7010507.1	4.86e-249	97.44	Zinc finger CCCH domain-containing protein 42, partial [Cucurbita argyrosperma s...	[more]
XP_022986885.1	4.15e-243	95.64	zinc finger CCCH domain-containing protein 25 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG16g06510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FUU2	1.26e-249	97.69	zinc finger CCCH domain-containing protein 25 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JFA2	2.01e-243	95.64	zinc finger CCCH domain-containing protein 25 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1FRM6	6.10e-200	98.99	Alkyl transferase OS=Cucurbita moschata OX=3662 GN=LOC111448184 PE=3 SV=1	[more]
A0A6J1JCL9	6.99e-199	98.32	Alkyl transferase OS=Cucurbita maxima OX=3661 GN=LOC111484510 PE=3 SV=1	[more]
A0A0A0KZW7	5.66e-196	82.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308540 PE=4 SV=1	[more]

BLAST of Cp4.1LG16g06510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58770.1	5.8e-83	56.99	Undecaprenyl pyrophosphate synthetase family protein	[more]
AT3G47120.1	7.1e-73	50.81	RNA recognition motif (RRM)-containing protein	[more]
AT5G58782.1	1.3e-71	54.92	Undecaprenyl pyrophosphate synthetase family protein	[more]
AT5G58784.1	1.2e-64	53.62	Undecaprenyl pyrophosphate synthetase family protein	[more]
AT5G58780.1	3.5e-64	45.10	Undecaprenyl pyrophosphate synthetase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 501..521
None	No IPR available	GENE3D	4.10.1000.10		coord: 504..584 e-value: 3.9E-7 score: 32.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 318..342
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 557..781
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 319..333
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 547..792
None	No IPR available	PANTHER	PTHR10291:SF33	ALKYL TRANSFERASE	coord: 70..324
None	No IPR available	CDD	cd12411	RRM_ist3_like	coord: 413..498 e-value: 1.28154E-59 score: 194.394
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 423..496 e-value: 1.7E-26 score: 104.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 424..493 e-value: 4.8E-21 score: 74.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 422..500 score: 19.740658
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 518..542 e-value: 0.001 score: 28.3
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 521..541 e-value: 1.8E-4 score: 21.3
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 516..543 score: 14.802481
IPR001441	Decaprenyl diphosphate synthase-like	PFAM	PF01255	Prenyltransf	coord: 99..321 e-value: 1.6E-76 score: 256.7
IPR001441	Decaprenyl diphosphate synthase-like	TIGRFAM	TIGR00055	TIGR00055	coord: 92..321 e-value: 2.9E-84 score: 279.9
IPR001441	Decaprenyl diphosphate synthase-like	PANTHER	PTHR10291	DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBER	coord: 70..324
IPR001441	Decaprenyl diphosphate synthase-like	HAMAP	MF_01139	ISPT	coord: 92..322 score: 38.121525
IPR001441	Decaprenyl diphosphate synthase-like	CDD	cd00475	Cis_IPPS	coord: 95..314 e-value: 3.503E-114 score: 343.201
IPR036424	Decaprenyl diphosphate synthase-like superfamily	GENE3D	3.40.1180.10		coord: 76..323 e-value: 2.8E-94 score: 316.8
IPR036424	Decaprenyl diphosphate synthase-like superfamily	SUPERFAMILY	64005	Undecaprenyl diphosphate synthase	coord: 92..317
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 390..497 e-value: 3.9E-27 score: 96.9
IPR018520	Di-trans-poly-cis-decaprenylcistransferase-like, conserved site	PROSITE	PS01066	UPP_SYNTHASE	coord: 267..284
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 386..504
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 519..541

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g06510.1	Cp4.1LG16g06510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0009668	plastid membrane organization
biological_process	GO:0016094	polyprenol biosynthetic process
biological_process	GO:0009409	response to cold
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0071011	precatalytic spliceosome
cellular_component	GO:0005686	U2 snRNP
molecular_function	GO:0045547	dehydrodolichyl diphosphate synthase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0002094	polyprenyltransferase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups