Cp4.1LG16g06170 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g06170
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Pentatricopeptide repeat-containing protein
Location	Cp4.1LG16: 6721652 .. 6724852 (+)
RNA-Seq Expression	Cp4.1LG16g06170
Synteny	Cp4.1LG16g06170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATACTGAACCTCGAGCTTTTCGGCGCAAATTTGTTACCCGCGTCTCAGTTTCTTCTTCTTGCTTCCACTTTTTCTTTTTTTTTTTTTCAGTCAAGTATGCGATTGGGGGCGTTCCTCTCGGGGTATAGGCTCATTCAAGCATTTCGTCGAACAGTTTCTAGCACTTCTTCGGCGGTCAATACAGTCCCCTTTCGATTCAACTTTCTTTGCACTCAAATCTCCGATAACTCATCGGGGAAAGTTTTAGAGTCAGAATTGGAGGGATCCAAGTGCTTATCATTGAGGATTGAGAGAATACCGAAGGGAGAAACGGTTGGGTATGCCTTCAGGAGCTGGATGGGCGATGGCTTTCCTATTCATCGTGGCGATATTTTTCATGCTATCAATCGCCTCAGGAAGCTCGAAAGGAACAAACACGCGCTTGAGGTTGCTATATCCATCTCCCTCTTTAAAGCTCCATTTTCGTTTGCTGTTATTCTTAGATGTTGTGAATTTTAATCTGCATCACAGTTGAGTTGGCTGATATCTTTTAAGAATGTAATCCAGAGAAGAACTTGAAAAATAGCAGTTTCAAGTATTTGCTTAAATCATTAAGAAGCTGAAAGTTTCAGAAATGATGGATTTGGATGCAATATCTTCTCCACAGATCATGAAAGTTGCACATGAGTAAAGACTATGGGGATGTTAAGCCGAAGATTGTATTTTCTTAACTTTCCATTAGATTTCATCACTGCATAATGCATAGAAGAGAACATTGTTTTTTTCTTGATTACTCTATTTCTTAGTGTAATGCTGTGTGCTTTTAGTTCATTTTACTTATAGTAGAGTCACTATGATGTAGTATTCCAGGCCTGCTTTATAATATAAGATTCATCTTCTGTTAACAGGGCTCCTTTTGTTAATTTGGATTTGTCTTCTGTTCTTGGCAGGTTATGGAGTGGGTGATCAGGGAGAAACCATATCGGATAAATGAATTGGACTACTCCTATTTGCTGGAATTTACAATCAAACACCATGGCATATCACAAGGTGAGAAGCTCTTTTCTAACATCCCTGTGGAATTTCAAGGAGAGTTGCTCTTCAACAATCTTGTGATTGCATGTTTAGACAAGGGAGCGATTAGACTTTCACTGGCTTACATGAGAAAAATGAGGGAAGTTTCCCATCGCATATCACACTTAGTTTTTAACCGCCTCATTATACTCCACTCGTCTCCCCGTCGTCGGAAACTTATCCCAAAAATTCTTACTCAGATGAAGGCTGATAAAGTGCCTTTACATGTTTCTACATATAACATTCTTATGAAAATAGAAGCCAATGAACACAATATTGAAGGGTTGATGAAGGTATTTGGTGATATGAAACGAGCTAATGTTGAACCAAATGAGGTGTCTTACTGCATAGTAGCTACTGCACACGCCGTGGCAAAGTTGTATACTGTAGCTGAAGCCTACACCGAGGCTATCGAAAAATCTATAGCTGGGAGTAATTGGTCGACCTATGATGTCCTAATCATCTTGTATGGCTATTTGAAGAAGGAGAAAGAGCTAGAGAGGACTTGGGGTACCGTACAAGGATTGCCACACATCCCATCTAAAAGTTTTATACTAGCTATTGAAGCATTTGGTAAAATTGGTTTACTAAGCCGAGCAGAAGAGCTCTGGTTAGAGATGAAAACCAAAAGAGGAATTAAGGCCACAGATCAACTCAATTCTATTTTATCTGTGTATTGCAAACACGGTTTGATTAAAAAGGCAACAGAATTCTTTAGGGAAATTGAAGCAAATGGGTGCGAACCAAACGCCATAACCTTTCGAAACCTGGCTTTAGGCTGCTTGAAAGCTGGCTTGGTGGAGGAAGGCATGAAAACACTAGATCTTGGATCAAATATAAGAAGCAGCAGCAGGAGAATTAGAATGTCAACTCCATGGTTGGAAACCACTCTTTCAATGATTGAAATTTTGGCAGAGAGGGGAGACGTTGAAAATACTGAAAAGTTATTCGAGGAACTCAAGGAAGCGAAGTATACAAGGTACACATTCGTTTACAACACTTTGTTAAGGGCTTACGTGAAGGCCAAGATTCATAATCCAAATCTTTTGAGGAGGATGATCATAGGAGGAGCTAGGCCTGACTCTGAAACCTACAGTTTGATCAAACTTACTGAGCAGTTTCAAAGCTAAAAAAAAGTTTGAACCATTTATACAATTTCAACGGTGTTTCTTTGATCAAGAAGTTGATCTCATGGTGGCCACCTACTTAATTTTTGATATTCTATGAGTTTCTTTGACAATTATGGTTGGATGTTGAGATTAGTCCGATGTATCAGACACCCATGGATAATATATTGCTAGATTCACCCTGTCAGGCGTCGGCAGTCTTCTTCCTAGCAGATAAGCTGTGGGTACCTCGTGGCCACTTGGCTGACATGGTTGGTTAACTCACGAGTAGCCACGCCGCCCACAATGCAGACTTCTCAAGTCCAAGAGAGAAGTCAAATCTCAAAAGTAAGTTGTCATCAACTTTGATGGAATGGGGGGAAATTTTGGACATTATAATCCTGTCCATGATTTTGAGTGTTTGGTTTCTGGATTTCACAAACCCTGAGAAGAAACAAGGACTCCCCTTTTCACTGCACACAAAGCATACCCTCTCATGTGTTCGAGGATTATTAAGAGTAGTCCCACATTGACTAATTAAGAGTAAGATCACGGGTTTACAAGTAAGGAACACTATCTTAATTGGTACGAGACCTTTTGGGAAACCAAAAGCAAAATCATGAGAGTTTATGCTCAAAGTGGACAATATCATATCATTATAGAGGTTCGTGGTTCCTAACATTCTCCTATGTCTTCTTCTGCATTTTTTTCAAATCATCACATCCTCAAAATGAAGAATCCCAACCCCCCCATTATTGGATCATCATATTTAAGCCCCAGGAAGCCACAAGACCACAAAATGAAGTACAAGGCGAAGCATTTACCAACAATCACAAGGAAGAAAACAACGAAGACAAGGACAGAATTATTTGATATTGCACAGACTTTTTTATTCAGCTCTTTTGTTGTCTTCACGTTTATAGGAAGGGTATGATATATGAGTGTCTGAAGAAGAGTAAAAGGATGAATAAGCAGACATTGTCGTCCTTCTCGTGACATTATTTCCTCTACTTGGTTCAGGAAAGAGCCAATAATTTGATA

mRNA sequence

TATACTGAACCTCGAGCTTTTCGGCGCAAATTTGTTACCCGCGTCTCAGTTTCTTCTTCTTGCTTCCACTTTTTCTTTTTTTTTTTTTCAGTCAAGTATGCGATTGGGGGCGTTCCTCTCGGGGTATAGGCTCATTCAAGCATTTCGTCGAACAGTTTCTAGCACTTCTTCGGCGGTCAATACAGTCCCCTTTCGATTCAACTTTCTTTGCACTCAAATCTCCGATAACTCATCGGGGAAAGTTTTAGAGTCAGAATTGGAGGGATCCAAGTGCTTATCATTGAGGATTGAGAGAATACCGAAGGGAGAAACGGTTGGGTATGCCTTCAGGAGCTGGATGGGCGATGGCTTTCCTATTCATCGTGGCGATATTTTTCATGCTATCAATCGCCTCAGGAAGCTCGAAAGGAACAAACACGCGCTTGAGGTTATGGAGTGGGTGATCAGGGAGAAACCATATCGGATAAATGAATTGGACTACTCCTATTTGCTGGAATTTACAATCAAACACCATGGCATATCACAAGGTGAGAAGCTCTTTTCTAACATCCCTGTGGAATTTCAAGGAGAGTTGCTCTTCAACAATCTTGTGATTGCATGTTTAGACAAGGGAGCGATTAGACTTTCACTGGCTTACATGAGAAAAATGAGGGAAGTTTCCCATCGCATATCACACTTAGTTTTTAACCGCCTCATTATACTCCACTCGTCTCCCCGTCGTCGGAAACTTATCCCAAAAATTCTTACTCAGATGAAGGCTGATAAAGTGCCTTTACATGTTTCTACATATAACATTCTTATGAAAATAGAAGCCAATGAACACAATATTGAAGGGTTGATGAAGGTATTTGGTGATATGAAACGAGCTAATGTTGAACCAAATGAGGTGTCTTACTGCATAGTAGCTACTGCACACGCCGTGGCAAAGTTGTATACTGTAGCTGAAGCCTACACCGAGGCTATCGAAAAATCTATAGCTGGGAGTAATTGGTCGACCTATGATGTCCTAATCATCTTGTATGGCTATTTGAAGAAGGAGAAAGAGCTAGAGAGGACTTGGGGTACCGTACAAGGATTGCCACACATCCCATCTAAAAGTTTTATACTAGCTATTGAAGCATTTGGTAAAATTGGTTTACTAAGCCGAGCAGAAGAGCTCTGGTTAGAGATGAAAACCAAAAGAGGAATTAAGGCCACAGATCAACTCAATTCTATTTTATCTGTGTATTGCAAACACGGTTTGATTAAAAAGGCAACAGAATTCTTTAGGGAAATTGAAGCAAATGGGTGCGAACCAAACGCCATAACCTTTCGAAACCTGGCTTTAGGCTGCTTGAAAGCTGGCTTGGTGGAGGAAGGCATGAAAACACTAGATCTTGGATCAAATATAAGAAGCAGCAGCAGGAGAATTAGAATGTCAACTCCATGGTTGGAAACCACTCTTTCAATGATTGAAATTTTGGCAGAGAGGGGAGACGTTGAAAATACTGAAAAGTTATTCGAGGAACTCAAGGAAGCGAAGTATACAAGGTACACATTCGTTTACAACACTTTGTTAAGGGCTTACGTGAAGGCCAAGATTCATAATCCAAATCTTTTGAGGAGGATGATCATAGGAGGAGCTAGGCCTGACTCTGAAACCTACAGTTTGATCAAACTTACTGAGCAGTTTCAAAGCTAAAAAAAAGTTTGAACCATTTATACAATTTCAACGGTGTTTCTTTGATCAAGAAGTTGATCTCATGGTGGCCACCTACTTAATTTTTGATATTCTATGAGTTTCTTTGACAATTATGGTTGGATGTTGAGATTAGTCCGATGTATCAGACACCCATGGATAATATATTGCTAGATTCACCCTGTCAGGCGTCGGCAGTCTTCTTCCTAGCAGATAAGCTGTGGGTACCTCGTGGCCACTTGGCTGACATGGTTGGTTAACTCACGAGTAGCCACGCCGCCCACAATGCAGACTTCTCAAGTCCAAGAGAGAAGTCAAATCTCAAAAGTAAGTTGTCATCAACTTTGATGGAATGGGGGGAAATTTTGGACATTATAATCCTGTCCATGATTTTGAGTGTTTGGTTTCTGGATTTCACAAACCCTGAGAAGAAACAAGGACTCCCCTTTTCACTGCACACAAAGCATACCCTCTCATGTGTTCGAGGATTATTAAGAGTAGTCCCACATTGACTAATTAAGAGTAAGATCACGGGTTTACAAGTAAGGAACACTATCTTAATTGGTACGAGACCTTTTGGGAAACCAAAAGCAAAATCATGAGAGTTTATGCTCAAAGTGGACAATATCATATCATTATAGAGGTTCGTGGTTCCTAACATTCTCCTATGTCTTCTTCTGCATTTTTTTCAAATCATCACATCCTCAAAATGAAGAATCCCAACCCCCCCATTATTGGATCATCATATTTAAGCCCCAGGAAGCCACAAGACCACAAAATGAAGTACAAGGCGAAGCATTTACCAACAATCACAAGGAAGAAAACAACGAAGACAAGGACAGAATTATTTGATATTGCACAGACTTTTTTATTCAGCTCTTTTGTTGTCTTCACGTTTATAGGAAGGGTATGATATATGAGTGTCTGAAGAAGAGTAAAAGGATGAATAAGCAGACATTGTCGTCCTTCTCGTGACATTATTTCCTCTACTTGGTTCAGGAAAGAGCCAATAATTTGATA

Coding sequence (CDS)

ATGCGATTGGGGGCGTTCCTCTCGGGGTATAGGCTCATTCAAGCATTTCGTCGAACAGTTTCTAGCACTTCTTCGGCGGTCAATACAGTCCCCTTTCGATTCAACTTTCTTTGCACTCAAATCTCCGATAACTCATCGGGGAAAGTTTTAGAGTCAGAATTGGAGGGATCCAAGTGCTTATCATTGAGGATTGAGAGAATACCGAAGGGAGAAACGGTTGGGTATGCCTTCAGGAGCTGGATGGGCGATGGCTTTCCTATTCATCGTGGCGATATTTTTCATGCTATCAATCGCCTCAGGAAGCTCGAAAGGAACAAACACGCGCTTGAGGTTATGGAGTGGGTGATCAGGGAGAAACCATATCGGATAAATGAATTGGACTACTCCTATTTGCTGGAATTTACAATCAAACACCATGGCATATCACAAGGTGAGAAGCTCTTTTCTAACATCCCTGTGGAATTTCAAGGAGAGTTGCTCTTCAACAATCTTGTGATTGCATGTTTAGACAAGGGAGCGATTAGACTTTCACTGGCTTACATGAGAAAAATGAGGGAAGTTTCCCATCGCATATCACACTTAGTTTTTAACCGCCTCATTATACTCCACTCGTCTCCCCGTCGTCGGAAACTTATCCCAAAAATTCTTACTCAGATGAAGGCTGATAAAGTGCCTTTACATGTTTCTACATATAACATTCTTATGAAAATAGAAGCCAATGAACACAATATTGAAGGGTTGATGAAGGTATTTGGTGATATGAAACGAGCTAATGTTGAACCAAATGAGGTGTCTTACTGCATAGTAGCTACTGCACACGCCGTGGCAAAGTTGTATACTGTAGCTGAAGCCTACACCGAGGCTATCGAAAAATCTATAGCTGGGAGTAATTGGTCGACCTATGATGTCCTAATCATCTTGTATGGCTATTTGAAGAAGGAGAAAGAGCTAGAGAGGACTTGGGGTACCGTACAAGGATTGCCACACATCCCATCTAAAAGTTTTATACTAGCTATTGAAGCATTTGGTAAAATTGGTTTACTAAGCCGAGCAGAAGAGCTCTGGTTAGAGATGAAAACCAAAAGAGGAATTAAGGCCACAGATCAACTCAATTCTATTTTATCTGTGTATTGCAAACACGGTTTGATTAAAAAGGCAACAGAATTCTTTAGGGAAATTGAAGCAAATGGGTGCGAACCAAACGCCATAACCTTTCGAAACCTGGCTTTAGGCTGCTTGAAAGCTGGCTTGGTGGAGGAAGGCATGAAAACACTAGATCTTGGATCAAATATAAGAAGCAGCAGCAGGAGAATTAGAATGTCAACTCCATGGTTGGAAACCACTCTTTCAATGATTGAAATTTTGGCAGAGAGGGGAGACGTTGAAAATACTGAAAAGTTATTCGAGGAACTCAAGGAAGCGAAGTATACAAGGTACACATTCGTTTACAACACTTTGTTAAGGGCTTACGTGAAGGCCAAGATTCATAATCCAAATCTTTTGAGGAGGATGATCATAGGAGGAGCTAGGCCTGACTCTGAAACCTACAGTTTGATCAAACTTACTGAGCAGTTTCAAAGCTAA

Protein sequence

MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLESELEGSKCLSLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEANEHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWSTYDVLIILYGYLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKTKRGIKATDQLNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS

Homology

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BLAST of Cp4.1LG16g06170 vs. ExPASy Swiss-Prot
Match: Q940Q2 (Pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g07590 PE=2 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 9.6e-196
Identity = 336/520 (64.62%), Postives = 419/520 (80.58%), Query Frame = 0


Query: 13  IQAFRRTVSSTSSAVNTVPFR-FNFLCTQISDNSSGKVL-----ESELEGSKCLSLRIER 72
           +QA RRT    S A+N   F+  +FL T IS   S +       E E E +KCLSLRIE+
Sbjct: 15  VQAIRRTTCVASPALNQTNFQASSFLTTLISSKKSPEETCIGSEEEEEEPNKCLSLRIEK 74

Query: 73  IPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKPYRINEL 132
           +PKG TVG A +SWMGDGFP+H GD++HAINRLRKL RNK ALE+MEW+IRE+PYR+ EL
Sbjct: 75  LPKGVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGEL 134

Query: 133 DYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMRE 192
           +YSYLLEFT+K HG+SQGEKLF+ +P EFQ ELL+NNLVIACLD+G IRL+L YM+KMRE
Sbjct: 135 EYSYLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRE 194

Query: 193 VSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEANEHNIEG 252
           + +R SHLV+NRLII +S+P RRKLI K L  MKADK   HVSTY+ILMK+EANEHNI+G
Sbjct: 195 LGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDG 254

Query: 253 LMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWSTYDVLII 312
           ++K F  MK+A VEPNEVSYCI+A AHAVA+LYTVAEAYTE IEKSI G NWST D+L+I
Sbjct: 255 VLKAFDGMKKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWSTLDILMI 314

Query: 313 LYGYLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKTKRGIKA 372
           LYG L KEKEL RTW  ++G  H+ SKS++LA EAF ++G L RAEELWLEMK  +G+K 
Sbjct: 315 LYGRLGKEKELARTWNVIRGFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKE 374

Query: 373 TDQLNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEEGMKTLD 432
           T+Q NS+LSVYCK GLI+KA   FRE+  NG +PN+IT+R+LALGC KA L++E +K ++
Sbjct: 375 TEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEALKNIE 434

Query: 433 LGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYTFVYNTL 492
           +G N++ +S+ I  STPWLETTLS+IE  AE+GDVEN+EKLFEE+K AKY RY FVYN L
Sbjct: 435 MGLNLK-TSKSIGSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVYNAL 494

Query: 493 LRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQ 527
            +AYVKAK+++PNL +RM++GGARPD+E+YSL+KL EQ++
Sbjct: 495 FKAYVKAKVYDPNLFKRMVLGGARPDAESYSLLKLVEQYK 533

[Close]

BLAST of Cp4.1LG16g06170 vs. ExPASy Swiss-Prot
Match: Q9C977 (Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80270 PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 9.0e-45
Identity = 115/425 (27.06%), Postives = 220/425 (51.76%), Query Frame = 0


Query: 70  GETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKPYRINELDYS 129
           G ++G A   W+ +G  I R +I  A+ +LR+      AL++ EW+   K   + E DY+
Sbjct: 141 GLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYA 200

Query: 130 YLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMREVSH 189
             L+ T+K  G+ +GE     IP  F+GE+L+  L+  C+  G ++ S     KM+++  
Sbjct: 201 SRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGF 260

Query: 190 RISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEANEHNIEGLMK 249
            +S    +++++LH    R+K I  +L  M+ + +   + TY IL+ ++   ++I G+ +
Sbjct: 261 PLSGFTCDQMLLLHKRIDRKK-IADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQ 320

Query: 250 VFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWSTYDVLIILYG 309
           +   MK   VE +  +  + A  ++ A L   AE   + +E     +N   +  L+ +Y 
Sbjct: 321 ILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYA 380

Query: 310 YLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKTKRGIKATDQ 369
            L +E E++R W   +  P+   +  + AI+AFGK+  +  AE ++ ++       ++  
Sbjct: 381 SLGREDEVKRIWKICESKPYF--EESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSST 440

Query: 370 LNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEEGMKTLDLGS 429
            + +L VY  H ++ K  +  + +  +GC   A T+  L    ++AG VE+    LD  S
Sbjct: 441 YSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKAS 500

Query: 430 NIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYTFVYNTLLRA 489
             + S  ++ M+     + + +++  ++RGDV NTEK+F +++EA YT     +  L++A
Sbjct: 501 --KQSHTKLMMN-----SFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQALMQA 555

Query: 490 YVKAK 495
           Y+ AK
Sbjct: 561 YINAK 555

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BLAST of Cp4.1LG16g06170 vs. ExPASy Swiss-Prot
Match: Q9XI21 (Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g15480 PE=2 SV=2)

HSP 1 Score: 177.2 bits (448), Expect = 5.0e-43
Identity = 118/457 (25.82%), Postives = 225/457 (49.23%), Query Frame = 0


Query: 70  GETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKPYRINELDYS 129
           G +VG A   W+  G   +R +   A+ +LRK      AL++ EW+   K + + E DY+
Sbjct: 139 GLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYA 198

Query: 130 YLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMREVSH 189
             L+   K  G  +GE     IP  F+GEL++  L+   +    +R + A   KM+++  
Sbjct: 199 CRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGF 258

Query: 190 RISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEANEHNIEGLMK 249
            +S    N+++IL+    ++K I  +L  ++ + +  +++TY IL+  + + ++I G+ +
Sbjct: 259 PLSTFTCNQMLILYKRVDKKK-IADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQ 318

Query: 250 VFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWSTYDVLIILYG 309
           +   MK   VE +  +  ++A  +A A L   AE   + +E      N      L+ +YG
Sbjct: 319 IVETMKSEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVYG 378

Query: 310 YLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKTKRGIKATDQ 369
           YL++E E+ R W   +  P       + AI AFGKI  +  AE ++ ++       +++ 
Sbjct: 379 YLQREDEVRRVWKICEENPRY--NEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVSSNV 438

Query: 370 LNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEEGMKTLDLGS 429
            + +L VY  H ++ +  +  +++  +GC   A+T+  +    ++AG VE+   +L    
Sbjct: 439 YSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSL---- 498

Query: 430 NIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYTFVYNTLLRA 489
              S + + +   P + + + ++     RGDV NTEK+F+ +K+A Y    + Y TL++A
Sbjct: 499 ---SKAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQA 558

Query: 490 YVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQ 527
           YV AK     +  RM      P+    + +   + F+
Sbjct: 559 YVNAKAPAYGMKERMKADNIFPNKRLAAQLAKADPFK 585

[Close]

BLAST of Cp4.1LG16g06170 vs. ExPASy Swiss-Prot
Match: Q9SY07 (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.3e-35
Identity = 115/450 (25.56%), Postives = 210/450 (46.67%), Query Frame = 0


Query: 78  RSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKPYRINELDYSYLLEFTIK 137
           R W  +G  + + ++   +  LRK++R KHALE+ EW++ ++  ++   DY+  L+   K
Sbjct: 82  RKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLISK 141

Query: 138 HHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMREVSHRISHLVFN 197
             G++  EK F ++P + +G     +L+ + +       + A   KM E     S L +N
Sbjct: 142 IRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYN 201

Query: 198 RLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEANEHNIEGLMKVFGDMKRA 257
            ++ ++ S  + + +P ++ ++K    P  + TYN+ +   A+ +++EG  KV+   K  
Sbjct: 202 HMLSMYISRGQFEKVPVLIKELKIRTSP-DIVTYNLWLTAFASGNDVEGAEKVYLKAKEE 261

Query: 258 NVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWSTYDVLIILYGYLKKEKEL 317
            + P+ V+Y ++   +A       A    + +EK ++  N   Y  LI L+  L  +  +
Sbjct: 262 KLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGV 321

Query: 318 ERTWGTVQ-GLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKTKRGIKATDQLNSILSV 377
             TW  V+     +    ++  I A  K+G   +A+ L+ E ++  G       N IL+ 
Sbjct: 322 NLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAE 381

Query: 378 YCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEEGMKTLDLGSNIRSSSR 437
           Y     +    +F+  I   G  P+  T+  L    LK   +E   K LD       S +
Sbjct: 382 YMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDME---KVLDCFGKAIDSVK 441

Query: 438 RIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYTFVYNTLLRAYVKAKIH 497
           +  ++   ++     +E   E+G+V+  EKL   L++A Y   T +YN+LLR Y KA   
Sbjct: 442 KWTVNVRLVKGACKELE---EQGNVKGAEKLMTLLQKAGYVN-TQLYNSLLRTYAKAGEM 501

Query: 498 NPNLLRRMIIGGARPDSETYSLIKLTEQFQ 527
              +  RM       D ET  LI+LT Q +
Sbjct: 502 ALIVEERMAKDNVELDEETKELIRLTSQMR 523

[Close]

BLAST of Cp4.1LG16g06170 vs. ExPASy Swiss-Prot
Match: Q9LRP6 (Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g15590 PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 6.7e-32
Identity = 112/463 (24.19%), Postives = 210/463 (45.36%), Query Frame = 0


Query: 65  ERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKPYRIN 124
           E I   ++V +    W+ +G  + + ++  AI+ LRK +     L++ EW+     +   
Sbjct: 149 ESIVAYKSVKHVLEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFT 208

Query: 125 ELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKM 184
           E +Y+  L+   K H + + E    +IP   +GE+++  L+  C+ K  +  +     KM
Sbjct: 209 EANYASQLDLVAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKM 268

Query: 185 REVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEANEHNI 244
           +E+    S    N+L++L+S   R+K I  +L  M+ + +    +TY+ L+  +    +I
Sbjct: 269 KELKFPTSVFACNQLLLLYSMHDRKK-ISDVLLLMERENIKPSRATYHFLINSKGLAGDI 328

Query: 245 EGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIE-KSIAGSNWSTYDV 304
            G+ K+   +K   +E +     I+A  +  A L   A+   + IE K +  + W     
Sbjct: 329 TGMEKIVETIKEEGIELDPELQSILAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRS- 388

Query: 305 LIILYGYLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKTKRG 364
           L+ LY  +     + R    V   P     + I AI+A+GK+  +  AE ++  +  K  
Sbjct: 389 LLPLYADIGDSDNVRRLSRFVDQNPRY--DNCISAIKAWGKLKEVEEAEAVFERLVEKYK 448

Query: 365 IKATDQLNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEEGMK 424
           I       +++ +Y ++ ++ K  +  + +   G      T+  L    +KAG  E G  
Sbjct: 449 IFPMMPYFALMEIYTENKMLAKGRDLVKRMGNAGIAIGPSTWHALVKLYIKAG--EVGKA 508

Query: 425 TLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYTFVY 484
            L L    + +  R     P   T ++++E  A+RGDV NTEK+F ++K A Y      Y
Sbjct: 509 ELILNRATKDNKMR-----PMFTTYMAILEEYAKRGDVHNTEKVFMKMKRASYAAQLMQY 568

Query: 485 NTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQ 527
            T+L AY+ AK     ++ RM      P+    + +     F+
Sbjct: 569 ETVLLAYINAKTPAYGMIERMKADNVFPNKSLAAKLAQVNPFK 600

[Close]

BLAST of Cp4.1LG16g06170 vs. NCBI nr
Match: XP_023511959.1 (pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1038 bits (2684), Expect = 0.0
Identity = 527/527 (100.00%), Postives = 527/527 (100.00%), Query Frame = 0


Query: 1   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLESELEGSKCL 60
           MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLESELEGSKCL
Sbjct: 1   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLESELEGSKCL 60

Query: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP 120
           SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP
Sbjct: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP 120

Query: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180
           YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY
Sbjct: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180

Query: 181 MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN 240
           MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN
Sbjct: 181 MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN 240

Query: 241 EHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWST 300
           EHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWST
Sbjct: 241 EHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWST 300

Query: 301 YDVLIILYGYLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT 360
           YDVLIILYGYLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT
Sbjct: 301 YDVLIILYGYLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT 360

Query: 361 KRGIKATDQLNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEE 420
           KRGIKATDQLNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEE
Sbjct: 361 KRGIKATDQLNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEE 420

Query: 421 GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT 480
           GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT
Sbjct: 421 GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT 480

Query: 481 FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS 527
           FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS
Sbjct: 481 FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS 527

[Close]

BLAST of Cp4.1LG16g06170 vs. NCBI nr
Match: XP_022986847.1 (pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1026 bits (2654), Expect = 0.0
Identity = 519/527 (98.48%), Postives = 522/527 (99.05%), Query Frame = 0


Query: 1   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLESELEGSKCL 60
           MRLGA LSGYRLIQAFRRTVSSTSS VNT+PFRFNFLCTQI DNSSGKVLESELEG KCL
Sbjct: 1   MRLGAILSGYRLIQAFRRTVSSTSSVVNTIPFRFNFLCTQIPDNSSGKVLESELEGPKCL 60

Query: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP 120
           SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP
Sbjct: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP 120

Query: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180
           YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY
Sbjct: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180

Query: 181 MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN 240
           MRKMREVSHRISHLVFNRLIILHSSPRRRK+IPKILTQMKADKVPLHVSTYNILMKIEAN
Sbjct: 181 MRKMREVSHRISHLVFNRLIILHSSPRRRKIIPKILTQMKADKVPLHVSTYNILMKIEAN 240

Query: 241 EHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWST 300
           EHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWST
Sbjct: 241 EHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWST 300

Query: 301 YDVLIILYGYLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT 360
           YDVLIILYGYLKKEKELERTWGT+QGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT
Sbjct: 301 YDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT 360

Query: 361 KRGIKATDQLNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEE 420
           KRGIKATDQLNSILSVYCKHGLIKKATE FREIEANGCEPNAITFRNLALGCLKAGLVEE
Sbjct: 361 KRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITFRNLALGCLKAGLVEE 420

Query: 421 GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT 480
           GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT
Sbjct: 421 GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT 480

Query: 481 FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS 527
           FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS
Sbjct: 481 FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS 527

[Close]

BLAST of Cp4.1LG16g06170 vs. NCBI nr
Match: XP_022943946.1 (pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1024 bits (2647), Expect = 0.0
Identity = 519/527 (98.48%), Postives = 522/527 (99.05%), Query Frame = 0


Query: 1   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLESELEGSKCL 60
           MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVL+SELEG KCL
Sbjct: 1   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLDSELEGPKCL 60

Query: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP 120
           SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP
Sbjct: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP 120

Query: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180
           YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY
Sbjct: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180

Query: 181 MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN 240
           MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN
Sbjct: 181 MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN 240

Query: 241 EHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWST 300
           EHNIEGLMKVFGDMK+A VEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKS AGSNWST
Sbjct: 241 EHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSFAGSNWST 300

Query: 301 YDVLIILYGYLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT 360
           YDVLIILYGYLKKEKELERTWGT+QGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT
Sbjct: 301 YDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT 360

Query: 361 KRGIKATDQLNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEE 420
            RGIKATDQLNSILSVYCKHGLIKKATE FREIEANGCEPNAITFRNLALGCLKAGLVEE
Sbjct: 361 IRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITFRNLALGCLKAGLVEE 420

Query: 421 GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT 480
           GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT
Sbjct: 421 GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT 480

Query: 481 FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS 527
           FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS
Sbjct: 481 FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS 527

[Close]

BLAST of Cp4.1LG16g06170 vs. NCBI nr
Match: KAG6570702.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1022 bits (2643), Expect = 0.0
Identity = 519/527 (98.48%), Postives = 520/527 (98.67%), Query Frame = 0


Query: 1   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLESELEGSKCL 60
           MRLGA LSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQI DNSSGKVLESELEG KCL
Sbjct: 1   MRLGAILSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQIPDNSSGKVLESELEGPKCL 60

Query: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP 120
           SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP
Sbjct: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP 120

Query: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180
           YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY
Sbjct: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180

Query: 181 MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN 240
           MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN
Sbjct: 181 MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN 240

Query: 241 EHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWST 300
           EHNIEGLMKVFGDMKRA VEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKS AGSNWST
Sbjct: 241 EHNIEGLMKVFGDMKRAKVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSFAGSNWST 300

Query: 301 YDVLIILYGYLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT 360
           YDVLIILYGYLKKEKELERTWGT+QGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT
Sbjct: 301 YDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT 360

Query: 361 KRGIKATDQLNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEE 420
            RGIKATDQLNSILSVYCKHGLIKKATE FREIEANGCEPNAITFRNLALGCLKAGLVEE
Sbjct: 361 IRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITFRNLALGCLKAGLVEE 420

Query: 421 GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT 480
           GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT
Sbjct: 421 GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT 480

Query: 481 FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS 527
           FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS
Sbjct: 481 FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS 527

[Close]

BLAST of Cp4.1LG16g06170 vs. NCBI nr
Match: KAG7010548.1 (Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1021 bits (2639), Expect = 0.0
Identity = 518/527 (98.29%), Postives = 521/527 (98.86%), Query Frame = 0


Query: 1   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLESELEGSKCL 60
           MRLGA LSGYRLIQAFRRTVSSTSSAV+TVP+RFNFLCTQI DNSSGKVLESELEG KCL
Sbjct: 1   MRLGAILSGYRLIQAFRRTVSSTSSAVDTVPYRFNFLCTQIPDNSSGKVLESELEGPKCL 60

Query: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP 120
           SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP
Sbjct: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP 120

Query: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180
           YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY
Sbjct: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180

Query: 181 MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN 240
           MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN
Sbjct: 181 MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN 240

Query: 241 EHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWST 300
           EHNIEGLMKVFGDMKRA VEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWST
Sbjct: 241 EHNIEGLMKVFGDMKRAKVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWST 300

Query: 301 YDVLIILYGYLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT 360
           YDVLIILYGYLKKEKELERTWGT+QGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT
Sbjct: 301 YDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT 360

Query: 361 KRGIKATDQLNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEE 420
            RGIKATDQLNSILSVYCKHGLIKKATE FREIEANGCEPNAITFRNLALGCLKAGLVEE
Sbjct: 361 IRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITFRNLALGCLKAGLVEE 420

Query: 421 GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT 480
           GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT
Sbjct: 421 GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT 480

Query: 481 FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS 527
           FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS
Sbjct: 481 FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS 527

[Close]

BLAST of Cp4.1LG16g06170 vs. ExPASy TrEMBL
Match: A0A6J1J8P8 (pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484462 PE=4 SV=1)

HSP 1 Score: 1026 bits (2654), Expect = 0.0
Identity = 519/527 (98.48%), Postives = 522/527 (99.05%), Query Frame = 0


Query: 1   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLESELEGSKCL 60
           MRLGA LSGYRLIQAFRRTVSSTSS VNT+PFRFNFLCTQI DNSSGKVLESELEG KCL
Sbjct: 1   MRLGAILSGYRLIQAFRRTVSSTSSVVNTIPFRFNFLCTQIPDNSSGKVLESELEGPKCL 60

Query: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP 120
           SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP
Sbjct: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP 120

Query: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180
           YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY
Sbjct: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180

Query: 181 MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN 240
           MRKMREVSHRISHLVFNRLIILHSSPRRRK+IPKILTQMKADKVPLHVSTYNILMKIEAN
Sbjct: 181 MRKMREVSHRISHLVFNRLIILHSSPRRRKIIPKILTQMKADKVPLHVSTYNILMKIEAN 240

Query: 241 EHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWST 300
           EHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWST
Sbjct: 241 EHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWST 300

Query: 301 YDVLIILYGYLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT 360
           YDVLIILYGYLKKEKELERTWGT+QGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT
Sbjct: 301 YDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT 360

Query: 361 KRGIKATDQLNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEE 420
           KRGIKATDQLNSILSVYCKHGLIKKATE FREIEANGCEPNAITFRNLALGCLKAGLVEE
Sbjct: 361 KRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITFRNLALGCLKAGLVEE 420

Query: 421 GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT 480
           GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT
Sbjct: 421 GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT 480

Query: 481 FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS 527
           FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS
Sbjct: 481 FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS 527

[Close]

BLAST of Cp4.1LG16g06170 vs. ExPASy TrEMBL
Match: A0A6J1FT35 (pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111448520 PE=4 SV=1)

HSP 1 Score: 1024 bits (2647), Expect = 0.0
Identity = 519/527 (98.48%), Postives = 522/527 (99.05%), Query Frame = 0


Query: 1   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLESELEGSKCL 60
           MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVL+SELEG KCL
Sbjct: 1   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLDSELEGPKCL 60

Query: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP 120
           SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP
Sbjct: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP 120

Query: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180
           YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY
Sbjct: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180

Query: 181 MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN 240
           MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN
Sbjct: 181 MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN 240

Query: 241 EHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWST 300
           EHNIEGLMKVFGDMK+A VEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKS AGSNWST
Sbjct: 241 EHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSFAGSNWST 300

Query: 301 YDVLIILYGYLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT 360
           YDVLIILYGYLKKEKELERTWGT+QGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT
Sbjct: 301 YDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT 360

Query: 361 KRGIKATDQLNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEE 420
            RGIKATDQLNSILSVYCKHGLIKKATE FREIEANGCEPNAITFRNLALGCLKAGLVEE
Sbjct: 361 IRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITFRNLALGCLKAGLVEE 420

Query: 421 GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT 480
           GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT
Sbjct: 421 GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT 480

Query: 481 FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS 527
           FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS
Sbjct: 481 FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS 527

[Close]

BLAST of Cp4.1LG16g06170 vs. ExPASy TrEMBL
Match: A0A5A7V3P3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G001110 PE=4 SV=1)

HSP 1 Score: 942 bits (2434), Expect = 0.0
Identity = 471/527 (89.37%), Postives = 493/527 (93.55%), Query Frame = 0


Query: 1   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLESELEGSKCL 60
           MR G F SGYRLIQAFRRTVSST S V T+PFRFNFLCTQI DN S    ESELEG KCL
Sbjct: 1   MRTGDFFSGYRLIQAFRRTVSSTPSTVGTIPFRFNFLCTQIPDNLSANFSESELEGPKCL 60

Query: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP 120
           SLRIERIPKGE+VGYAFRSWMGDGFPIHRGDIFH INRLRK ERNK ALEVMEWVIREKP
Sbjct: 61  SLRIERIPKGESVGYAFRSWMGDGFPIHRGDIFHTINRLRKFERNKRALEVMEWVIREKP 120

Query: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180
           YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY
Sbjct: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180

Query: 181 MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN 240
           MRKMREV H ISHLVFNRLIILHSS RRRK+IPKIL+QMKADKVPLHVSTYNILMKIEAN
Sbjct: 181 MRKMREVGHSISHLVFNRLIILHSSFRRRKIIPKILSQMKADKVPLHVSTYNILMKIEAN 240

Query: 241 EHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWST 300
           EHN+EGLM+VF DMKRA VEPNEVSYCIVATAHAVAKLY V EAY EAIEKSIAG+NWST
Sbjct: 241 EHNVEGLMRVFSDMKRAKVEPNEVSYCIVATAHAVAKLYIVVEAYVEAIEKSIAGNNWST 300

Query: 301 YDVLIILYGYLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT 360
           YDVLIILYGYLKKEKELERTWGT+QG PHIPSKSFILAIEAFG+IGLLSRAEELWLEMKT
Sbjct: 301 YDVLIILYGYLKKEKELERTWGTIQGFPHIPSKSFILAIEAFGRIGLLSRAEELWLEMKT 360

Query: 361 KRGIKATDQLNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEE 420
           KRGIKATDQ NSILSVYC+HGLIKKATE FR+IE NGC+PNAITFR+LALGCLKAGLVEE
Sbjct: 361 KRGIKATDQFNSILSVYCRHGLIKKATEIFRKIEENGCKPNAITFRHLALGCLKAGLVEE 420

Query: 421 GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT 480
            +KTLDLGSN  SS++ +R STPWLETTLSMIEILAERGD+ENTEKLF+ELKEAKYTRYT
Sbjct: 421 ALKTLDLGSNTTSSTKIVRKSTPWLETTLSMIEILAERGDIENTEKLFKELKEAKYTRYT 480

Query: 481 FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS 527
           FVYN L++AYVKAKIHNPNLLRRMIIGGARPDSETYSLIKL+EQFQS
Sbjct: 481 FVYNILIKAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLSEQFQS 527

[Close]

BLAST of Cp4.1LG16g06170 vs. ExPASy TrEMBL
Match: A0A1S3CKS5 (pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103502083 PE=4 SV=1)

HSP 1 Score: 942 bits (2434), Expect = 0.0
Identity = 471/527 (89.37%), Postives = 493/527 (93.55%), Query Frame = 0


Query: 1   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLESELEGSKCL 60
           MR G F SGYRLIQAFRRTVSST S V T+PFRFNFLCTQI DN S    ESELEG KCL
Sbjct: 1   MRTGDFFSGYRLIQAFRRTVSSTPSTVGTIPFRFNFLCTQIPDNLSANFSESELEGPKCL 60

Query: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP 120
           SLRIERIPKGE+VGYAFRSWMGDGFPIHRGDIFH INRLRK ERNK ALEVMEWVIREKP
Sbjct: 61  SLRIERIPKGESVGYAFRSWMGDGFPIHRGDIFHTINRLRKFERNKRALEVMEWVIREKP 120

Query: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180
           YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY
Sbjct: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180

Query: 181 MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN 240
           MRKMREV H ISHLVFNRLIILHSS RRRK+IPKIL+QMKADKVPLHVSTYNILMKIEAN
Sbjct: 181 MRKMREVGHSISHLVFNRLIILHSSFRRRKIIPKILSQMKADKVPLHVSTYNILMKIEAN 240

Query: 241 EHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWST 300
           EHN+EGLM+VF DMKRA VEPNEVSYCIVATAHAVAKLY V EAY EAIEKSIAG+NWST
Sbjct: 241 EHNVEGLMRVFSDMKRAKVEPNEVSYCIVATAHAVAKLYIVVEAYVEAIEKSIAGNNWST 300

Query: 301 YDVLIILYGYLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT 360
           YDVLIILYGYLKKEKELERTWGT+QG PHIPSKSFILAIEAFG+IGLLSRAEELWLEMKT
Sbjct: 301 YDVLIILYGYLKKEKELERTWGTIQGFPHIPSKSFILAIEAFGRIGLLSRAEELWLEMKT 360

Query: 361 KRGIKATDQLNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEE 420
           KRGIKATDQ NSILSVYC+HGLIKKATE FR+IE NGC+PNAITFR+LALGCLKAGLVEE
Sbjct: 361 KRGIKATDQFNSILSVYCRHGLIKKATEIFRKIEENGCKPNAITFRHLALGCLKAGLVEE 420

Query: 421 GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT 480
            +KTLDLGSN  SS++ +R STPWLETTLSMIEILAERGD+ENTEKLF+ELKEAKYTRYT
Sbjct: 421 ALKTLDLGSNTTSSTKIVRKSTPWLETTLSMIEILAERGDIENTEKLFKELKEAKYTRYT 480

Query: 481 FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS 527
           FVYN L++AYVKAKIHNPNLLRRMIIGGARPDSETYSLIKL+EQFQS
Sbjct: 481 FVYNILIKAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLSEQFQS 527

[Close]

BLAST of Cp4.1LG16g06170 vs. ExPASy TrEMBL
Match: A0A0A0KFE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190380 PE=4 SV=1)

HSP 1 Score: 941 bits (2432), Expect = 0.0
Identity = 471/527 (89.37%), Postives = 496/527 (94.12%), Query Frame = 0


Query: 1   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLESELEGSKCL 60
           M  G+F SGYRLIQAFRRTVSST SAV+T+PFRFNFLCTQI  N S  VLESELE  KCL
Sbjct: 1   MPTGSFFSGYRLIQAFRRTVSSTPSAVSTIPFRFNFLCTQIPGNLSPNVLESELEEPKCL 60

Query: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKP 120
           SLRIERIPKGE VGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNK ALEVMEWVIREKP
Sbjct: 61  SLRIERIPKGELVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKRALEVMEWVIREKP 120

Query: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180
           YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY
Sbjct: 121 YRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAY 180

Query: 181 MRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEAN 240
           MRKMREV H ISHLVFNRLIILHSS RRRK+IPKIL+QMKADKVPLHVSTYNILMKIEAN
Sbjct: 181 MRKMREVGHSISHLVFNRLIILHSSFRRRKIIPKILSQMKADKVPLHVSTYNILMKIEAN 240

Query: 241 EHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWST 300
           EHNIEGLM+VF DM+RA VEPNEVSYCIVATAHAVAKLYTV EAY EA+EKSIAG+NWST
Sbjct: 241 EHNIEGLMRVFSDMRRAKVEPNEVSYCIVATAHAVAKLYTVVEAYVEALEKSIAGNNWST 300

Query: 301 YDVLIILYGYLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKT 360
           YDVLIILYGYL KEKELERTWG +QG PHIPSKSFILAIEAFG+IGLLSRAEELWLEMKT
Sbjct: 301 YDVLIILYGYLNKEKELERTWGIIQGFPHIPSKSFILAIEAFGRIGLLSRAEELWLEMKT 360

Query: 361 KRGIKATDQLNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEE 420
           KRGIKATDQ NSILSVYC+HGLIKKATE FR+IEANGC+PNAITFR+LA GCLKAGLVEE
Sbjct: 361 KRGIKATDQFNSILSVYCRHGLIKKATEIFRKIEANGCKPNAITFRHLAFGCLKAGLVEE 420

Query: 421 GMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYT 480
            +KTLDLGSN  SS++ +R STPWLETTLSMIEILAERGD+ENTEKLF+ELKEAKYTRYT
Sbjct: 421 ALKTLDLGSNTTSSTKIVRKSTPWLETTLSMIEILAERGDIENTEKLFKELKEAKYTRYT 480

Query: 481 FVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS 527
           FVYNTL++AYVKAKIHNPNLLRRMI+GGARPDSETYSLIKL+EQFQS
Sbjct: 481 FVYNTLIKAYVKAKIHNPNLLRRMIVGGARPDSETYSLIKLSEQFQS 527

[Close]

BLAST of Cp4.1LG16g06170 vs. TAIR 10
Match: AT1G07590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 684.5 bits (1765), Expect = 6.8e-197
Identity = 336/520 (64.62%), Postives = 419/520 (80.58%), Query Frame = 0


Query: 13  IQAFRRTVSSTSSAVNTVPFR-FNFLCTQISDNSSGKVL-----ESELEGSKCLSLRIER 72
           +QA RRT    S A+N   F+  +FL T IS   S +       E E E +KCLSLRIE+
Sbjct: 15  VQAIRRTTCVASPALNQTNFQASSFLTTLISSKKSPEETCIGSEEEEEEPNKCLSLRIEK 74

Query: 73  IPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKPYRINEL 132
           +PKG TVG A +SWMGDGFP+H GD++HAINRLRKL RNK ALE+MEW+IRE+PYR+ EL
Sbjct: 75  LPKGVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGEL 134

Query: 133 DYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMRE 192
           +YSYLLEFT+K HG+SQGEKLF+ +P EFQ ELL+NNLVIACLD+G IRL+L YM+KMRE
Sbjct: 135 EYSYLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRE 194

Query: 193 VSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEANEHNIEG 252
           + +R SHLV+NRLII +S+P RRKLI K L  MKADK   HVSTY+ILMK+EANEHNI+G
Sbjct: 195 LGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDG 254

Query: 253 LMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWSTYDVLII 312
           ++K F  MK+A VEPNEVSYCI+A AHAVA+LYTVAEAYTE IEKSI G NWST D+L+I
Sbjct: 255 VLKAFDGMKKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWSTLDILMI 314

Query: 313 LYGYLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKTKRGIKA 372
           LYG L KEKEL RTW  ++G  H+ SKS++LA EAF ++G L RAEELWLEMK  +G+K 
Sbjct: 315 LYGRLGKEKELARTWNVIRGFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKE 374

Query: 373 TDQLNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEEGMKTLD 432
           T+Q NS+LSVYCK GLI+KA   FRE+  NG +PN+IT+R+LALGC KA L++E +K ++
Sbjct: 375 TEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEALKNIE 434

Query: 433 LGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYTFVYNTL 492
           +G N++ +S+ I  STPWLETTLS+IE  AE+GDVEN+EKLFEE+K AKY RY FVYN L
Sbjct: 435 MGLNLK-TSKSIGSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVYNAL 494

Query: 493 LRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQ 527
            +AYVKAK+++PNL +RM++GGARPD+E+YSL+KL EQ++
Sbjct: 495 FKAYVKAKVYDPNLFKRMVLGGARPDAESYSLLKLVEQYK 533

[Close]

BLAST of Cp4.1LG16g06170 vs. TAIR 10
Match: AT1G80270.1 (PENTATRICOPEPTIDE REPEAT 596 )

HSP 1 Score: 183.0 bits (463), Expect = 6.4e-46
Identity = 115/425 (27.06%), Postives = 220/425 (51.76%), Query Frame = 0


Query: 70  GETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKPYRINELDYS 129
           G ++G A   W+ +G  I R +I  A+ +LR+      AL++ EW+   K   + E DY+
Sbjct: 141 GLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYA 200

Query: 130 YLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMREVSH 189
             L+ T+K  G+ +GE     IP  F+GE+L+  L+  C+  G ++ S     KM+++  
Sbjct: 201 SRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGF 260

Query: 190 RISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEANEHNIEGLMK 249
            +S    +++++LH    R+K I  +L  M+ + +   + TY IL+ ++   ++I G+ +
Sbjct: 261 PLSGFTCDQMLLLHKRIDRKK-IADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQ 320

Query: 250 VFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWSTYDVLIILYG 309
           +   MK   VE +  +  + A  ++ A L   AE   + +E     +N   +  L+ +Y 
Sbjct: 321 ILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYA 380

Query: 310 YLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKTKRGIKATDQ 369
            L +E E++R W   +  P+   +  + AI+AFGK+  +  AE ++ ++       ++  
Sbjct: 381 SLGREDEVKRIWKICESKPYF--EESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSST 440

Query: 370 LNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEEGMKTLDLGS 429
            + +L VY  H ++ K  +  + +  +GC   A T+  L    ++AG VE+    LD  S
Sbjct: 441 YSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKAS 500

Query: 430 NIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYTFVYNTLLRA 489
             + S  ++ M+     + + +++  ++RGDV NTEK+F +++EA YT     +  L++A
Sbjct: 501 --KQSHTKLMMN-----SFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQALMQA 555

Query: 490 YVKAK 495
           Y+ AK
Sbjct: 561 YINAK 555

[Close]

BLAST of Cp4.1LG16g06170 vs. TAIR 10
Match: AT1G80270.2 (PENTATRICOPEPTIDE REPEAT 596 )

HSP 1 Score: 183.0 bits (463), Expect = 6.4e-46
Identity = 115/425 (27.06%), Postives = 220/425 (51.76%), Query Frame = 0


Query: 70  GETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKPYRINELDYS 129
           G ++G A   W+ +G  I R +I  A+ +LR+      AL++ EW+   K   + E DY+
Sbjct: 141 GLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYA 200

Query: 130 YLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMREVSH 189
             L+ T+K  G+ +GE     IP  F+GE+L+  L+  C+  G ++ S     KM+++  
Sbjct: 201 SRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGF 260

Query: 190 RISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEANEHNIEGLMK 249
            +S    +++++LH    R+K I  +L  M+ + +   + TY IL+ ++   ++I G+ +
Sbjct: 261 PLSGFTCDQMLLLHKRIDRKK-IADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQ 320

Query: 250 VFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWSTYDVLIILYG 309
           +   MK   VE +  +  + A  ++ A L   AE   + +E     +N   +  L+ +Y 
Sbjct: 321 ILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYA 380

Query: 310 YLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKTKRGIKATDQ 369
            L +E E++R W   +  P+   +  + AI+AFGK+  +  AE ++ ++       ++  
Sbjct: 381 SLGREDEVKRIWKICESKPYF--EESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSST 440

Query: 370 LNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEEGMKTLDLGS 429
            + +L VY  H ++ K  +  + +  +GC   A T+  L    ++AG VE+    LD  S
Sbjct: 441 YSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKAS 500

Query: 430 NIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYTFVYNTLLRA 489
             + S  ++ M+     + + +++  ++RGDV NTEK+F +++EA YT     +  L++A
Sbjct: 501 --KQSHTKLMMN-----SFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQALMQA 555

Query: 490 YVKAK 495
           Y+ AK
Sbjct: 561 YINAK 555

[Close]

BLAST of Cp4.1LG16g06170 vs. TAIR 10
Match: AT1G80270.3 (PENTATRICOPEPTIDE REPEAT 596 )

HSP 1 Score: 183.0 bits (463), Expect = 6.4e-46
Identity = 115/425 (27.06%), Postives = 220/425 (51.76%), Query Frame = 0


Query: 70  GETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKPYRINELDYS 129
           G ++G A   W+ +G  I R +I  A+ +LR+      AL++ EW+   K   + E DY+
Sbjct: 141 GLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYA 200

Query: 130 YLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMREVSH 189
             L+ T+K  G+ +GE     IP  F+GE+L+  L+  C+  G ++ S     KM+++  
Sbjct: 201 SRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGF 260

Query: 190 RISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEANEHNIEGLMK 249
            +S    +++++LH    R+K I  +L  M+ + +   + TY IL+ ++   ++I G+ +
Sbjct: 261 PLSGFTCDQMLLLHKRIDRKK-IADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQ 320

Query: 250 VFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWSTYDVLIILYG 309
           +   MK   VE +  +  + A  ++ A L   AE   + +E     +N   +  L+ +Y 
Sbjct: 321 ILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYA 380

Query: 310 YLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKTKRGIKATDQ 369
            L +E E++R W   +  P+   +  + AI+AFGK+  +  AE ++ ++       ++  
Sbjct: 381 SLGREDEVKRIWKICESKPYF--EESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSST 440

Query: 370 LNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEEGMKTLDLGS 429
            + +L VY  H ++ K  +  + +  +GC   A T+  L    ++AG VE+    LD  S
Sbjct: 441 YSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKAS 500

Query: 430 NIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYTFVYNTLLRA 489
             + S  ++ M+     + + +++  ++RGDV NTEK+F +++EA YT     +  L++A
Sbjct: 501 --KQSHTKLMMN-----SFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQALMQA 555

Query: 490 YVKAK 495
           Y+ AK
Sbjct: 561 YINAK 555

[Close]

BLAST of Cp4.1LG16g06170 vs. TAIR 10
Match: AT1G15480.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 177.2 bits (448), Expect = 3.5e-44
Identity = 118/457 (25.82%), Postives = 225/457 (49.23%), Query Frame = 0


Query: 70  GETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVMEWVIREKPYRINELDYS 129
           G +VG A   W+  G   +R +   A+ +LRK      AL++ EW+   K + + E DY+
Sbjct: 139 GLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYA 198

Query: 130 YLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMREVSH 189
             L+   K  G  +GE     IP  F+GEL++  L+   +    +R + A   KM+++  
Sbjct: 199 CRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGF 258

Query: 190 RISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEANEHNIEGLMK 249
            +S    N+++IL+    ++K I  +L  ++ + +  +++TY IL+  + + ++I G+ +
Sbjct: 259 PLSTFTCNQMLILYKRVDKKK-IADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQ 318

Query: 250 VFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSIAGSNWSTYDVLIILYG 309
           +   MK   VE +  +  ++A  +A A L   AE   + +E      N      L+ +YG
Sbjct: 319 IVETMKSEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVYG 378

Query: 310 YLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKTKRGIKATDQ 369
           YL++E E+ R W   +  P       + AI AFGKI  +  AE ++ ++       +++ 
Sbjct: 379 YLQREDEVRRVWKICEENPRY--NEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVSSNV 438

Query: 370 LNSILSVYCKHGLIKKATEFFREIEANGCEPNAITFRNLALGCLKAGLVEEGMKTLDLGS 429
            + +L VY  H ++ +  +  +++  +GC   A+T+  +    ++AG VE+   +L    
Sbjct: 439 YSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSL---- 498

Query: 430 NIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYTFVYNTLLRA 489
              S + + +   P + + + ++     RGDV NTEK+F+ +K+A Y    + Y TL++A
Sbjct: 499 ---SKAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQA 558

Query: 490 YVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQ 527
           YV AK     +  RM      P+    + +   + F+
Sbjct: 559 YVNAKAPAYGMKERMKADNIFPNKRLAAQLAKADPFK 585

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g06170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940Q2	9.6e-196	64.62	Pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Arabidop...	[more]
Q9C977	9.0e-45	27.06	Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidop...	[more]
Q9XI21	5.0e-43	25.82	Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidop...	[more]
Q9SY07	1.3e-35	25.56	Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop...	[more]
Q9LRP6	6.7e-32	24.19	Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidop...	[more]

BLAST of Cp4.1LG16g06170 vs. NCBI nr


Match Name	Identity	Description
XP_023511959.1	100.00	pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Cucurbita ...	[more]
XP_022986847.1	98.48	pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Cucurbita ...	[more]
XP_022943946.1	98.48	pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Cucurbita ...	[more]
KAG6570702.1	98.48	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG7010548.1	98.29	Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosper...	[more]

BLAST of Cp4.1LG16g06170 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1J8P8	98.48	pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Cucurbit...	[more]
A0A6J1FT35	98.48	pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Cucurbit...	[more]
A0A5A7V3P3	89.37	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CKS5	89.37	pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Cucumis ...	[more]
A0A0A0KFE9	89.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190380 PE=4 SV=1	[more]

BLAST of Cp4.1LG16g06170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07590.1	6.8e-197	64.62	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G80270.1	6.4e-46	27.06	PENTATRICOPEPTIDE REPEAT 596	[more]
AT1G80270.2	6.4e-46	27.06	PENTATRICOPEPTIDE REPEAT 596	[more]
AT1G80270.3	6.4e-46	27.06	PENTATRICOPEPTIDE REPEAT 596	[more]
AT1G15480.1	3.5e-44	25.82	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 91..326 e-value: 3.1E-17 score: 65.0 coord: 331..438 e-value: 1.5E-16 score: 62.7 coord: 439..527 e-value: 8.5E-8 score: 34.0
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 450..474 e-value: 0.64 score: 10.4 coord: 339..361 e-value: 0.077 score: 13.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 371..402 e-value: 2.3E-7 score: 28.6 coord: 230..263 e-value: 0.0015 score: 16.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 228..272 e-value: 4.5E-9 score: 36.4 coord: 371..412 e-value: 2.3E-8 score: 34.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 227..261 score: 9.010246
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 366..400 score: 10.599635
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 12..524
None	No IPR available	PANTHER	PTHR45717:SF11	BNAC08G45480D PROTEIN	coord: 12..524

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g06170.1	Cp4.1LG16g06170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding