![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Cp4.1LG16g06160 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGAGCATGGGATAAAAGCATTACACTTTTTTTTTGTTTAATTAAAGTATTCCATAAAAATTATATTATGATTTTTAAATAAAAAAATAATCGTAGTTTTTTGTCATCCTTGAAGCGTGAACCGCTCCATCTCCGCTCAAGTTCTTTGATTCTGCGCTCCTTTTTTTCGTTGTTATCGAATTCTCTGATTCAAGGATTCTCAGGAAAAGGGAAAAGGGAAAGAGAAATGGCCAGGAAGTTCTTCGTCGGAGGCAACTGGAAATGCGTATGCTGCTTAGTTCTTATTTAAAATTCTTTTGTTTATTTTCTTTCTATTTTGTCTCCATGTTTTTGATGTTCCGCCGTTCATGGTACGATCTATTAGATGCTGAATCTGTTGTTTATATTGATTTCTAGCTATTTGGTTTGAATTTTTTGGGTTTTGATTGCGAACTGTGAGGAACTTCCAAACACACTTTTCTCACTTGATTTTTCGATGTACTGACTTCGAAGATCCTGTGATTTTCCCGATCGGAGTGTGCTATATGTAATTTTCAATCGTCTTCGATGTGTTTAAGTGATAAGAGTATGTGTAACTTTGGAATTGGAGTTTGGGAGCACTGGACTTGCTTGATTGAACTAATTATCTTGTTCATCGAATGAAAATTCTACAGAATGGAACAAACGAGGAGACGAAGAAAATTGTGAGCACGTTGAATCAAGCTGAAATTCCTTCAGAAGATGTTGTGGGTACGTATGGAAATCCTGTTTAGTTTTCAGTTGTATCAGTGTTCTACGAAGCTCTTCCAGTGATTGATTTGGTCTGTATATGTTATTCTCCTTTGCAGAAGTTGTTGTGAGTCCACCTTTTGTGTTTCTTTCGCTGGTTAAGAGTTTGCTGAGGTCTGATATTCAAGTTGCAGCACAGAACTGTTGGGTTCGTAGGGGTGGTGCTTTTACAGGAGAAATTAGGTATGATTTTCAGCTTATGCGTTCGGTATATCGAACAGGAACGTGCGTGCCGTGGCTAGTTGATAATATCTTTATTCATTTGTCATAACTTTGTTCTTTGTCCAAAATTTTCAGAGTTAGTCTCAACAGAAACTGACGAATGCAATCTTTTGTCTTGATTTTCTGGGCCTTTTTCTTTTTTATTTGAAGAAATATTTCTCTGAACTCTTAAGAATTAAGTGTGCTTCATGCGATTCATTTGAATTTGATATCCTTTTGCCTGCAGTGCTGAGATGCTCGTCAATTTGGGGATTCCTTGGGTTATTATTGGGCATTCTGAAAGAAGGCTTCTTTTGAACGAATCCAATGAGGTAACCCCTGCTAGAACGGAAACTCGTGACCTTATCCCGAACTTTCCGAGGAAAAAGATTAATTTCACCATCAACAAATATCACTGATTCAAAGTCTATTCCCTCATCCGTTTGTATTCAGTTTGTAGGAGATAAAGTTGCATATGCACTTTCTCAAGGCATTAAAGTCATTGCTTGTGTTGGGGAGACTCTTGAGCAGCGAGAATCAGGATCAACATTGGACGTTGTTGCAGCACAAACTAAAGCAATTGCAGGTACTTCTACTTTCTCAGCTCTGACATTGAAAGAAAATTCTTGCAACTTTCAGGAACTTAGAGGTCGATTGTATGCTCGTGTGCGTGCTGTGAGGCTTTTAATATTACACTCCATTGTTTTTGTACAAAATGGATGACCGTGTCTGTTACGTGGCAGATAAGATTTCTCATTGGGACAATGTCGTCTTGGCTTACGAGCCAGTTTGGGCTATCGGAACAGGGAAAGTTGCAACCCCTACACAGGCTCAGGAAGTAAGCTTTCTTCTCAAACATTCGTAAACGTCTCTTCGATTTCGGTCAATTAACAACTCACTGTGGCTCTTTCAAAGGTCCATTCTGAATTGAGGAAATGGTTTCACAACAATGTTGGTGCTGAAGTTGCTGAGTCGATTAGAATTATATATGGAGGTAACCTCTTTGCTCCTATAAAAAACGTCTGCATGTATGCTATGTGTCACAACCTAACTATGAAGAAAGCACGATCATCACACTATGCATTCTTTTCCTTTACTTTGTTGAGGTGGTCAAAACTGTAAATTCAAGCATACTTGTTAGGAAAGCCTTTGCAATCGAGCTCAAACCCTTGAAAGTACGACCGTGACACTGCATTCTTTACCTATACTTCGTTGAGGTGGTCAAAACTGTAAATTCAAGCCTACTGCTTAGGAAAGCCTTTGCAATCAATCTCGAACCCCTTGAAAGTACGACCGTGACACTATGCATTATTTTCCTCTACTTTGTTGAGTTGGTCAAAACTGTAAATTCAAGCATACGGGTTAGGAAAGCCTTTGCAATTGAGCTCGAACCCTTGAAAGTACGATCGTGACACTATGCATTATTTTTCTCTACTTTGTTGAGTTGGTCAAAACTATAAATTCAAGCATACTGATTAGGAAAGCCGTTGCAATCGAGCTCGAACCCTCCGAAGCATGATATAGCCAAAAGCAATCCGAGGGAGGGTTCTAAATTTTAGAAAACAACCAAATAAAAATCTTAATTTGGTGTGGAGCTAACCTGTCTACGTTATTAATTTGTCTTCTAGGTTCTGTAAATGGTGCAAACTGCAAAGAACTGGCAGCACAACCTGACTTGGATGGATTTTTGGTTGGAGGAGCTTCGGTTAAGGTTGAACTGTTCTCATATCATATCATTTTTTTTTTCACTTGTTTGGTGTAGTGAACTTAATTCGACTTCAATTACCGACTCGTCTTTATTTTTTTTTCTTGAACTAGCCCGAGTTTGTTGACATCATCAACTCTGCCACAGTGAAGAAATCTGCATGAGTCGCTCGAGAACGAGAATGAGATAGTTCGATCTTCCTTTAGATAACCGGGTATGTTGCGGGAACCGTTGTTTGCTTGAGCAATATACGTTTGAGACCCAATGCTGTTGTATAATAATCACTTTGTATTCTCTTCTTTTTTATGCTTTTTAACATAAATTCAGCACGGTTGAGGTCAATACTTCGTTTAGGATTAGACTGAGATAGATAAATATAAATTTGAATTTAACGAATTTGATAAATTAAAT TGGAGCATGGGATAAAAGCATTACACTTTTTTTTTGTTTAATTAAAGTATTCCATAAAAATTATATTATGATTTTTAAATAAAAAAATAATCGTAGTTTTTTGTCATCCTTGAAGCGTGAACCGCTCCATCTCCGCTCAAGTTCTTTGATTCTGCGCTCCTTTTTTTCGTTGTTATCGAATTCTCTGATTCAAGGATTCTCAGGAAAAGGGAAAAGGGAAAGAGAAATGGCCAGGAAGTTCTTCGTCGGAGGCAACTGGAAATGCAATGGAACAAACGAGGAGACGAAGAAAATTGTGAGCACGTTGAATCAAGCTGAAATTCCTTCAGAAGATGTTGTGGAAGTTGTTGTGAGTCCACCTTTTGTGTTTCTTTCGCTGGTTAAGAGTTTGCTGAGGTCTGATATTCAAGTTGCAGCACAGAACTGTTGGGTTCGTAGGGGTGGTGCTTTTACAGGAGAAATTAGTGCTGAGATGCTCGTCAATTTGGGGATTCCTTGGGTTATTATTGGGCATTCTGAAAGAAGGCTTCTTTTGAACGAATCCAATGAGTTTGTAGGAGATAAAGTTGCATATGCACTTTCTCAAGGCATTAAAGTCATTGCTTGTGTTGGGGAGACTCTTGAGCAGCGAGAATCAGGATCAACATTGGACGTTGTTGCAGCACAAACTAAAGCAATTGCAGATAAGATTTCTCATTGGGACAATGTCGTCTTGGCTTACGAGCCAGTTTGGGCTATCGGAACAGGGAAAGTTGCAACCCCTACACAGGCTCAGGAAGTCCATTCTGAATTGAGGAAATGGTTTCACAACAATGTTGGTGCTGAAGTTGCTGAGTCGATTAGAATTATATATGGAGGTTCTGTAAATGGTGCAAACTGCAAAGAACTGGCAGCACAACCTGACTTGGATGGATTTTTGGTTGGAGGAGCTTCGGTTAAGCCCGAGTTTGTTGACATCATCAACTCTGCCACAGTGAAGAAATCTGCATGAGTCGCTCGAGAACGAGAATGAGATAGTTCGATCTTCCTTTAGATAACCGGGTATGTTGCGGGAACCGTTGTTTGCTTGAGCAATATACGTTTGAGACCCAATGCTGTTGTATAATAATCACTTTGTATTCTCTTCTTTTTTATGCTTTTTAACATAAATTCAGCACGGTTGAGGTCAATACTTCGTTTAGGATTAGACTGAGATAGATAAATATAAATTTGAATTTAACGAATTTGATAAATTAAAT ATGGCCAGGAAGTTCTTCGTCGGAGGCAACTGGAAATGCAATGGAACAAACGAGGAGACGAAGAAAATTGTGAGCACGTTGAATCAAGCTGAAATTCCTTCAGAAGATGTTGTGGAAGTTGTTGTGAGTCCACCTTTTGTGTTTCTTTCGCTGGTTAAGAGTTTGCTGAGGTCTGATATTCAAGTTGCAGCACAGAACTGTTGGGTTCGTAGGGGTGGTGCTTTTACAGGAGAAATTAGTGCTGAGATGCTCGTCAATTTGGGGATTCCTTGGGTTATTATTGGGCATTCTGAAAGAAGGCTTCTTTTGAACGAATCCAATGAGTTTGTAGGAGATAAAGTTGCATATGCACTTTCTCAAGGCATTAAAGTCATTGCTTGTGTTGGGGAGACTCTTGAGCAGCGAGAATCAGGATCAACATTGGACGTTGTTGCAGCACAAACTAAAGCAATTGCAGATAAGATTTCTCATTGGGACAATGTCGTCTTGGCTTACGAGCCAGTTTGGGCTATCGGAACAGGGAAAGTTGCAACCCCTACACAGGCTCAGGAAGTCCATTCTGAATTGAGGAAATGGTTTCACAACAATGTTGGTGCTGAAGTTGCTGAGTCGATTAGAATTATATATGGAGGTTCTGTAAATGGTGCAAACTGCAAAGAACTGGCAGCACAACCTGACTTGGATGGATTTTTGGTTGGAGGAGCTTCGGTTAAGCCCGAGTTTGTTGACATCATCAACTCTGCCACAGTGAAGAAATCTGCATGA MARKFFVGGNWKCNGTNEETKKIVSTLNQAEIPSEDVVEVVVSPPFVFLSLVKSLLRSDIQVAAQNCWVRRGGAFTGEISAEMLVNLGIPWVIIGHSERRLLLNESNEFVGDKVAYALSQGIKVIACVGETLEQRESGSTLDVVAAQTKAIADKISHWDNVVLAYEPVWAIGTGKVATPTQAQEVHSELRKWFHNNVGAEVAESIRIIYGGSVNGANCKELAAQPDLDGFLVGGASVKPEFVDIINSATVKKSA Homology
BLAST of Cp4.1LG16g06160 vs. ExPASy Swiss-Prot
Match: P21820 (Triosephosphate isomerase, cytosolic OS=Coptis japonica OX=3442 PE=2 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 2.4e-120 Identity = 208/253 (82.21%), Postives = 231/253 (91.30%), Query Frame = 0
BLAST of Cp4.1LG16g06160 vs. ExPASy Swiss-Prot
Match: P48491 (Triosephosphate isomerase, cytosolic OS=Arabidopsis thaliana OX=3702 GN=CTIMC PE=1 SV=2) HSP 1 Score: 424.1 bits (1089), Expect = 1.1e-117 Identity = 202/254 (79.53%), Postives = 231/254 (90.94%), Query Frame = 0
BLAST of Cp4.1LG16g06160 vs. ExPASy Swiss-Prot
Match: P48495 (Triosephosphate isomerase, cytosolic OS=Petunia hybrida OX=4102 GN=TPIP1 PE=2 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 9.5e-117 Identity = 202/254 (79.53%), Postives = 227/254 (89.37%), Query Frame = 0
BLAST of Cp4.1LG16g06160 vs. ExPASy Swiss-Prot
Match: P12863 (Triosephosphate isomerase, cytosolic OS=Zea mays OX=4577 PE=1 SV=3) HSP 1 Score: 417.2 bits (1071), Expect = 1.4e-115 Identity = 198/253 (78.26%), Postives = 223/253 (88.14%), Query Frame = 0
BLAST of Cp4.1LG16g06160 vs. ExPASy Swiss-Prot
Match: P48494 (Triosephosphate isomerase, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=TPI PE=1 SV=3) HSP 1 Score: 417.2 bits (1071), Expect = 1.4e-115 Identity = 203/253 (80.24%), Postives = 225/253 (88.93%), Query Frame = 0
BLAST of Cp4.1LG16g06160 vs. NCBI nr
Match: XP_023511999.1 (triosephosphate isomerase, cytosolic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 504 bits (1298), Expect = 5.60e-180 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g06160 vs. NCBI nr
Match: KAG6570705.1 (Triosephosphate isomerase, cytosolic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010550.1 Triosephosphate isomerase, cytosolic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 499 bits (1284), Expect = 7.64e-178 Identity = 251/254 (98.82%), Postives = 252/254 (99.21%), Query Frame = 0
BLAST of Cp4.1LG16g06160 vs. NCBI nr
Match: XP_022944453.1 (triosephosphate isomerase, cytosolic-like [Cucurbita moschata]) HSP 1 Score: 497 bits (1279), Expect = 4.42e-177 Identity = 250/254 (98.43%), Postives = 251/254 (98.82%), Query Frame = 0
BLAST of Cp4.1LG16g06160 vs. NCBI nr
Match: XP_022986929.1 (triosephosphate isomerase, cytosolic-like [Cucurbita maxima]) HSP 1 Score: 496 bits (1277), Expect = 8.91e-177 Identity = 249/254 (98.03%), Postives = 251/254 (98.82%), Query Frame = 0
BLAST of Cp4.1LG16g06160 vs. NCBI nr
Match: XP_038881012.1 (triosephosphate isomerase, cytosolic [Benincasa hispida]) HSP 1 Score: 473 bits (1217), Expect = 1.25e-167 Identity = 236/254 (92.91%), Postives = 244/254 (96.06%), Query Frame = 0
BLAST of Cp4.1LG16g06160 vs. ExPASy TrEMBL
Match: A0A6J1FY28 (triosephosphate isomerase, cytosolic-like OS=Cucurbita moschata OX=3662 GN=LOC111448904 PE=3 SV=1) HSP 1 Score: 497 bits (1279), Expect = 2.14e-177 Identity = 250/254 (98.43%), Postives = 251/254 (98.82%), Query Frame = 0
BLAST of Cp4.1LG16g06160 vs. ExPASy TrEMBL
Match: A0A6J1JHF9 (triosephosphate isomerase, cytosolic-like OS=Cucurbita maxima OX=3661 GN=LOC111484521 PE=3 SV=1) HSP 1 Score: 496 bits (1277), Expect = 4.32e-177 Identity = 249/254 (98.03%), Postives = 251/254 (98.82%), Query Frame = 0
BLAST of Cp4.1LG16g06160 vs. ExPASy TrEMBL
Match: A0A1S3B4U7 (triosephosphate isomerase, cytosolic OS=Cucumis melo OX=3656 GN=LOC103486035 PE=3 SV=1) HSP 1 Score: 473 bits (1217), Expect = 6.05e-168 Identity = 234/254 (92.13%), Postives = 246/254 (96.85%), Query Frame = 0
BLAST of Cp4.1LG16g06160 vs. ExPASy TrEMBL
Match: A0A6J1D597 (triosephosphate isomerase, cytosolic OS=Momordica charantia OX=3673 GN=LOC111017058 PE=3 SV=1) HSP 1 Score: 471 bits (1212), Expect = 3.50e-167 Identity = 233/254 (91.73%), Postives = 242/254 (95.28%), Query Frame = 0
BLAST of Cp4.1LG16g06160 vs. ExPASy TrEMBL
Match: A0A0A0KZL7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G598000 PE=3 SV=1) HSP 1 Score: 468 bits (1204), Expect = 5.80e-166 Identity = 231/254 (90.94%), Postives = 245/254 (96.46%), Query Frame = 0
BLAST of Cp4.1LG16g06160 vs. TAIR 10
Match: AT3G55440.1 (triosephosphate isomerase ) HSP 1 Score: 424.1 bits (1089), Expect = 8.0e-119 Identity = 202/254 (79.53%), Postives = 231/254 (90.94%), Query Frame = 0
BLAST of Cp4.1LG16g06160 vs. TAIR 10
Match: AT2G21170.1 (triosephosphate isomerase ) HSP 1 Score: 318.9 bits (816), Expect = 3.6e-87 Identity = 156/252 (61.90%), Postives = 188/252 (74.60%), Query Frame = 0
BLAST of Cp4.1LG16g06160 vs. TAIR 10
Match: AT2G21170.2 (triosephosphate isomerase ) HSP 1 Score: 294.3 bits (752), Expect = 9.5e-80 Identity = 146/242 (60.33%), Postives = 178/242 (73.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|