Cp4.1LG16g06060 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g06060
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor MYB59-like
Location	Cp4.1LG16: 6616747 .. 6617818 (-)
RNA-Seq Expression	Cp4.1LG16g06060
Synteny	Cp4.1LG16g06060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGAGGGACAGGAAATCAGAAAGGGTCCATGGACAGAGCAAGAAGACATCCAACTGATATGCTTTGTGGGCTTGTTTGGCGATCGAAGATGGGATTTCATTGCTAAAGTTTCAGGTTTGAAGGTGGCGGGAGACAGTTGCTAGGTAGGCTAAACTGAAGATTTGCTATTTTTGTGAAAGGCTCTGTTTTAACTTCCCATTTGGATTTGGGATTTGGGATTTGGAATTTGTGTTGTAGGACTAAACAGAACAGGAAAAAGTTGCAGGCTGAGATGGGTTAATTACCTTCATCCAGGTCTCAAGAGAGGCAAGATGACTGCTCAAGAAGAACGACTCGTGCTTGAACTTCACAACAAATGGGGAAACAGGTCTATCCTAAACTAGATAGATTTTCATTGAAACCTCTCCCTAACAGACGCGTTTTAAAACCTTGAGGGAATCTCGAAAGGGAAACCCCAAAGAGGACAATATCTGCTAGCGGTTGGTTTGGGCTGTTACACATCATCTCTAACTTCCTTTGTTTCATCTCAGATGGTCCAAAATTGCTCGGAAATTGCCTGGCCGCACGGATAACGAAATCAAGAACTACTGGAGAACCCACATGAGGAAGAAGGCACAGGAGAAAAGAAGGGCTTTGTCTTCATCTTCCTCCTCCTCCTCCTCTTATTCATCCAACAACCCAGCTGTGGAATTTCCTGCAGACACTGGACCAGTGAAGTTTTTCGACTCAGGGGGGTCTGAAATCTCAGCTTCATCATCATCAACAAAGAAGAAGATGGTGGAGAATCAAGAACTGGGTGATCCAAATGGATTCTCCATGGATGATATATGGAAAGATATTGATCTATCGGATCATGAGAGCTTGACTATGAATCAAGATGTGTACAGTGAAGAAGACTGCAACAACTTTTCCTGCCCTGCCCTGACTTCTCCTACTCCTTGGGACTATTATTGTGGGGATTCTCTGTGGAGGATGGAGGAGGAGGAAGAGAGTAAGCTAATTTTCTCTGGGTATGATCATAACGGGAGGCCACGCCTTGCTCAGCCTAATCAGAATTTTTTCTATTGA

mRNA sequence

ATGGTTGAGGGACAGGAAATCAGAAAGGGTCCATGGACAGAGCAAGAAGACATCCAACTGATATGCTTTGTGGGCTTGTTTGGCGATCGAAGATGGGATTTCATTGCTAAAGTTTCAGGACTAAACAGAACAGGAAAAAGTTGCAGGCTGAGATGGGTTAATTACCTTCATCCAGGGGGGTCTGAAATCTCAGCTTCATCATCATCAACAAAGAAGAAGATGGTGGAGAATCAAGAACTGGGTGATCCAAATGGATTCTCCATGGATGATATATGGAAAGATATTGATCTATCGGATCATGAGAGCTTGACTATGAATCAAGATGTGTACAGTGAAGAAGACTGCAACAACTTTTCCTGCCCTGCCCTGACTTCTCCTACTCCTTGGGACTATTATTGTGGGGATTCTCTGTGGAGGATGGAGGAGGAGGAAGAGAGTAAGCTAATTTTCTCTGGGTATGATCATAACGGGAGGCCACGCCTTGCTCAGCCTAATCAGAATTTTTTCTATTGA

Coding sequence (CDS)

ATGGTTGAGGGACAGGAAATCAGAAAGGGTCCATGGACAGAGCAAGAAGACATCCAACTGATATGCTTTGTGGGCTTGTTTGGCGATCGAAGATGGGATTTCATTGCTAAAGTTTCAGGACTAAACAGAACAGGAAAAAGTTGCAGGCTGAGATGGGTTAATTACCTTCATCCAGGGGGGTCTGAAATCTCAGCTTCATCATCATCAACAAAGAAGAAGATGGTGGAGAATCAAGAACTGGGTGATCCAAATGGATTCTCCATGGATGATATATGGAAAGATATTGATCTATCGGATCATGAGAGCTTGACTATGAATCAAGATGTGTACAGTGAAGAAGACTGCAACAACTTTTCCTGCCCTGCCCTGACTTCTCCTACTCCTTGGGACTATTATTGTGGGGATTCTCTGTGGAGGATGGAGGAGGAGGAAGAGAGTAAGCTAATTTTCTCTGGGTATGATCATAACGGGAGGCCACGCCTTGCTCAGCCTAATCAGAATTTTTTCTATTGA

Protein sequence

MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGGSEISASSSSTKKKMVENQELGDPNGFSMDDIWKDIDLSDHESLTMNQDVYSEEDCNNFSCPALTSPTPWDYYCGDSLWRMEEEEESKLIFSGYDHNGRPRLAQPNQNFFY

Homology

[Close]

BLAST of Cp4.1LG16g06060 vs. ExPASy Swiss-Prot
Match: Q53NK6 (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS1 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.2e-28
Identity = 83/232 (35.78%), Postives = 107/232 (46.12%), Query Frame = 0


Query: 5   QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG----- 64
           +E+RKGPWTEQED+QL+C V LFGDRRWDF+AKVSGLNRTGKSCRLRWVNYLHPG     
Sbjct: 6   EEMRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGR 65

Query: 65  --------------------------------------------------GSEISASSSS 124
                                                               ++S SSSS
Sbjct: 66  MSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERRGDMSPSSSS 125

Query: 125 TK---------KKMVENQELGD------------------PNGFSMDDIWKDIDLSDHES 154
           +             + + + GD                   +G++MD IWK+I+     S
Sbjct: 126 SSLVYQSCLLDTVPIISMDGGDIHDDRSCMARVLKSTQSVMDGYTMDQIWKEIEAPGAPS 185

[Close]

BLAST of Cp4.1LG16g06060 vs. ExPASy Swiss-Prot
Match: Q4JL84 (Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2)

HSP 1 Score: 122.9 bits (307), Expect = 3.6e-27
Identity = 80/217 (36.87%), Postives = 99/217 (45.62%), Query Frame = 0


Query: 5   QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG----- 64
           +E RKGPWTEQEDI L+ FV LFGDRRWDF+AKVSGLNRTGKSCRLRWVNYLHPG     
Sbjct: 6   EEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGK 65

Query: 65  -----------------------------------------------------GSEISAS 124
                                                                 S  S+S
Sbjct: 66  MTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPMSPTSSS 125

Query: 125 SSSTKKKM--VENQELGDPNG----------FSMDDIWKDIDLSDHESLTMNQDVYSEED 152
           S+     M    +Q+ G  NG          +SMDDIW++ID S    +   +D Y  E 
Sbjct: 126 SNCCSSSMTTTTSQDTGGSNGKMNQECEDGYYSMDDIWREIDQSGANVIKPVKDNYYSEQ 185

[Close]

BLAST of Cp4.1LG16g06060 vs. ExPASy Swiss-Prot
Match: Q4JL76 (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-25
Identity = 80/222 (36.04%), Postives = 99/222 (44.59%), Query Frame = 0


Query: 5   QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG----- 64
           +EIRKGPWTEQED+QL+C V LFG+RRWDFIAKVSGLNRTGKSCRLRWVNYLHPG     
Sbjct: 6   EEIRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGR 65

Query: 65  --------------------------------------------------GSEISASSSS 124
                                                              S +S SSSS
Sbjct: 66  MSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKSNMSPSSSS 125

Query: 125 TKKKM-------------VENQELG---------------DPNGFSMDDIWKDIDLSDHE 144
           +                 +E QEL                D +G+ MD IW +I+ + + 
Sbjct: 126 SSLTYQSCHPETPSMIIGIEEQELHGGSGCITSIMKSTPVDMDGYPMDQIWMEIE-APNV 185

[Close]

BLAST of Cp4.1LG16g06060 vs. ExPASy Swiss-Prot
Match: Q9LX82 (Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.3e-24
Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 1  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG 60
          M++ +  RKGPWTEQEDI L+ FV LFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG
Sbjct: 1  MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG 59

[Close]

BLAST of Cp4.1LG16g06060 vs. ExPASy Swiss-Prot
Match: Q9SCP1 (Transcription factor MYB27 OS=Arabidopsis thaliana OX=3702 GN=MYB27 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.4e-15
Identity = 32/54 (59.26%), Postives = 44/54 (81.48%), Query Frame = 0


Query: 5  QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHP 59
          + +R+GPW E+ED +L+  + L G+RRWD +A VSGL R+GKSCRLRW+NYL+P
Sbjct: 7  ETLRRGPWLEEEDERLVKVISLLGERRWDSLAIVSGLKRSGKSCRLRWMNYLNP 60

[Close]

BLAST of Cp4.1LG16g06060 vs. NCBI nr
Match: XP_023511995.1 (myb-related protein MYBAS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 331 bits (849), Expect = 9.07e-113
Identity = 170/261 (65.13%), Postives = 170/261 (65.13%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG- 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG 
Sbjct: 12  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 71

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 72  KRGKMTAQEERLVLELHNKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALSS 131

Query: 121 ------------------------------GSEISASSSSTKKKMVENQELGDPNGFSMD 170
                                         GSEISASSSSTKKKMVENQELGDPNGFSMD
Sbjct: 132 SSSSSSSYSSNNPAVEFPADTGPVKFFDSGGSEISASSSSTKKKMVENQELGDPNGFSMD 191

[Close]

BLAST of Cp4.1LG16g06060 vs. NCBI nr
Match: XP_022943941.1 (transcription factor MYB59-like [Cucurbita moschata])

HSP 1 Score: 331 bits (849), Expect = 9.07e-113
Identity = 170/261 (65.13%), Postives = 170/261 (65.13%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG- 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG 
Sbjct: 12  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 71

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 72  KRGKMTAQEERLVLELHNKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALSS 131

Query: 121 ------------------------------GSEISASSSSTKKKMVENQELGDPNGFSMD 170
                                         GSEISASSSSTKKKMVENQELGDPNGFSMD
Sbjct: 132 SSSSSSSYSSNNPAVEFPADTGPVKFFDSGGSEISASSSSTKKKMVENQELGDPNGFSMD 191

[Close]

BLAST of Cp4.1LG16g06060 vs. NCBI nr
Match: XP_022986918.1 (transcription factor MYB59-like [Cucurbita maxima])

HSP 1 Score: 325 bits (833), Expect = 2.47e-110
Identity = 167/261 (63.98%), Postives = 168/261 (64.37%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG- 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG 
Sbjct: 12  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 71

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 72  KRGKMTAQEERLVLELHNKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALSS 131

Query: 121 ------------------------------GSEISASSSSTKKKMVENQELGDPNGFSMD 170
                                         GSEISASS STKKKMVENQELGDPNGFSMD
Sbjct: 132 SSSSSSSYSSNNPAVEFPADTGPVKFFDSGGSEISASSPSTKKKMVENQELGDPNGFSMD 191

[Close]

BLAST of Cp4.1LG16g06060 vs. NCBI nr
Match: KAG7010573.1 (Transcription factor MYB59, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 319 bits (817), Expect = 4.39e-109
Identity = 156/193 (80.83%), Postives = 157/193 (81.35%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRW-------- 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGL    K   L          
Sbjct: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKAQEKRRALSSSSSSSSSY 60

Query: 61  ---------------VNYLHPGGSEISASSSSTKKKMVENQELGDPNGFSMDDIWKDIDL 120
                          V +   GGSEISASSSSTKKKMVENQELGDPNGFSMDDIWKDIDL
Sbjct: 61  SSNNPAVEFPADTGPVKFFDSGGSEISASSSSTKKKMVENQELGDPNGFSMDDIWKDIDL 120

Query: 121 SDHESLTMNQDVYSEEDCNNFSCPALTSPTPWDYYCGDSLWRMEEEEESKLIFSGYDHNG 170
           SDHESLTMNQDVYSEEDCNNFSCPALTSPTPWDYYCGDSLWRMEEEEESKLIFSGYDHNG
Sbjct: 121 SDHESLTMNQDVYSEEDCNNFSCPALTSPTPWDYYCGDSLWRMEEEEESKLIFSGYDHNG 180

[Close]

BLAST of Cp4.1LG16g06060 vs. NCBI nr
Match: XP_022148320.1 (transcription factor MYB59 isoform X1 [Momordica charantia])

HSP 1 Score: 284 bits (727), Expect = 2.53e-94
Identity = 154/267 (57.68%), Postives = 160/267 (59.93%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG- 60
           MVEGQEIRKGPWTEQEDIQLIC+VGLFGDRRWD IAKVSGLNRTGKSCRLRWVNYLHPG 
Sbjct: 1   MVEGQEIRKGPWTEQEDIQLICYVGLFGDRRWDSIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  KRGKMSSQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALSA 120

Query: 121 ------------------------------------GSEISASSSSTKKKMVENQELGDP 170
                                               GSE++A S+ TKKKM ENQE GDP
Sbjct: 121 SLSSSSSSSSSSSNNSAVEFPADTGPVKFFDSGGSEGSEVTALST-TKKKMEENQEQGDP 180

[Close]

BLAST of Cp4.1LG16g06060 vs. ExPASy TrEMBL
Match: A0A6J1FT29 (transcription factor MYB59-like OS=Cucurbita moschata OX=3662 GN=LOC111448512 PE=4 SV=1)

HSP 1 Score: 331 bits (849), Expect = 4.39e-113
Identity = 170/261 (65.13%), Postives = 170/261 (65.13%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG- 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG 
Sbjct: 12  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 71

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 72  KRGKMTAQEERLVLELHNKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALSS 131

Query: 121 ------------------------------GSEISASSSSTKKKMVENQELGDPNGFSMD 170
                                         GSEISASSSSTKKKMVENQELGDPNGFSMD
Sbjct: 132 SSSSSSSYSSNNPAVEFPADTGPVKFFDSGGSEISASSSSTKKKMVENQELGDPNGFSMD 191

[Close]

BLAST of Cp4.1LG16g06060 vs. ExPASy TrEMBL
Match: A0A6J1JHY1 (transcription factor MYB59-like OS=Cucurbita maxima OX=3661 GN=LOC111484512 PE=4 SV=1)

HSP 1 Score: 325 bits (833), Expect = 1.20e-110
Identity = 167/261 (63.98%), Postives = 168/261 (64.37%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG- 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG 
Sbjct: 12  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 71

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 72  KRGKMTAQEERLVLELHNKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALSS 131

Query: 121 ------------------------------GSEISASSSSTKKKMVENQELGDPNGFSMD 170
                                         GSEISASS STKKKMVENQELGDPNGFSMD
Sbjct: 132 SSSSSSSYSSNNPAVEFPADTGPVKFFDSGGSEISASSPSTKKKMVENQELGDPNGFSMD 191

[Close]

BLAST of Cp4.1LG16g06060 vs. ExPASy TrEMBL
Match: A0A6J1D2K9 (transcription factor MYB59 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017001 PE=4 SV=1)

HSP 1 Score: 284 bits (727), Expect = 1.22e-94
Identity = 154/267 (57.68%), Postives = 160/267 (59.93%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG- 60
           MVEGQEIRKGPWTEQEDIQLIC+VGLFGDRRWD IAKVSGLNRTGKSCRLRWVNYLHPG 
Sbjct: 1   MVEGQEIRKGPWTEQEDIQLICYVGLFGDRRWDSIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  KRGKMSSQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALSA 120

Query: 121 ------------------------------------GSEISASSSSTKKKMVENQELGDP 170
                                               GSE++A S+ TKKKM ENQE GDP
Sbjct: 121 SLSSSSSSSSSSSNNSAVEFPADTGPVKFFDSGGSEGSEVTALST-TKKKMEENQEQGDP 180

[Close]

BLAST of Cp4.1LG16g06060 vs. ExPASy TrEMBL
Match: A0A0A0KCU4 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G303240 PE=4 SV=1)

HSP 1 Score: 249 bits (637), Expect = 5.05e-82
Identity = 132/196 (67.35%), Postives = 147/196 (75.00%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG- 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG 
Sbjct: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  ----------------------GSEISASSSSTKKKMVENQELG-DPNGFSMDDIWKDID 120
                                    IS    +++KK+ EN+E+G D NG++MDDIWKDI+
Sbjct: 61  KRGKMTTQEERLVLELHAKWGNSKGISCRYRTSEKKIEENKEVGGDQNGYTMDDIWKDIE 120

Query: 121 LSDHESLTMNQDVYSEEDCNNFSCPALTSP-TPW-DYYCGDSLWRMEEEEESKLIFSGYD 170
           +S+HESL MNQDVYSE+  NNFSCPAL S  + W DY CGDSLW+MEEEE SKLIFSG+ 
Sbjct: 121 VSNHESLIMNQDVYSED--NNFSCPALNSAASSWEDYCCGDSLWKMEEEE-SKLIFSGWP 180

[Close]

BLAST of Cp4.1LG16g06060 vs. ExPASy TrEMBL
Match: A0A6J1L3T5 (transcription factor MYB59-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499641 PE=4 SV=1)

HSP 1 Score: 243 bits (619), Expect = 1.76e-78
Identity = 139/256 (54.30%), Postives = 148/256 (57.81%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG- 60
           M EGQ IRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG 
Sbjct: 1   MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  KRGKMSTQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALCS 120

Query: 121 -----------------------GSEISASSSSTKKKMVENQELGDPNGFSMDDIWKDID 170
                                  GSEISASSS TKKK  ENQ +GDPNG+SMDDIWKDID
Sbjct: 121 SSSSSSSSSCSSSSGPVKFFDSGGSEISASSS-TKKKGEENQGVGDPNGYSMDDIWKDID 180

[Close]

BLAST of Cp4.1LG16g06060 vs. TAIR 10
Match: AT5G59780.3 (myb domain protein 59 )

HSP 1 Score: 122.9 bits (307), Expect = 2.5e-28
Identity = 80/217 (36.87%), Postives = 99/217 (45.62%), Query Frame = 0


Query: 5   QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG----- 64
           +E RKGPWTEQEDI L+ FV LFGDRRWDF+AKVSGLNRTGKSCRLRWVNYLHPG     
Sbjct: 6   EEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGK 65

Query: 65  -----------------------------------------------------GSEISAS 124
                                                                 S  S+S
Sbjct: 66  MTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPMSPTSSS 125

Query: 125 SSSTKKKM--VENQELGDPNG----------FSMDDIWKDIDLSDHESLTMNQDVYSEED 152
           S+     M    +Q+ G  NG          +SMDDIW++ID S    +   +D Y  E 
Sbjct: 126 SNCCSSSMTTTTSQDTGGSNGKMNQECEDGYYSMDDIWREIDQSGANVIKPVKDNYYSEQ 185

[Close]

BLAST of Cp4.1LG16g06060 vs. TAIR 10
Match: AT3G46130.1 (myb domain protein 48 )

HSP 1 Score: 112.1 bits (279), Expect = 4.5e-25
Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 1  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG 60
          M++ +  RKGPWTEQEDI L+ FV LFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG
Sbjct: 1  MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG 59

[Close]

BLAST of Cp4.1LG16g06060 vs. TAIR 10
Match: AT2G47190.1 (myb domain protein 2 )

HSP 1 Score: 89.0 bits (219), Expect = 4.1e-18
Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 3  EGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHP 59
          E  ++RKGPWTE+ED  L+ FV + GD RW+ IA+ SGL RTGKSCRLRW+NYL P
Sbjct: 16 EDSDVRKGPWTEEEDAILVNFVSIHGDARWNHIARSSGLKRTGKSCRLRWLNYLRP 71

[Close]

BLAST of Cp4.1LG16g06060 vs. TAIR 10
Match: AT1G48000.1 (myb domain protein 112 )

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-16
Identity = 31/53 (58.49%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 6  EIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHP 59
          EIR+GPWT +ED++L+ ++ L G+ RW+ +++ +GLNRTGKSCRLRW+NYL P
Sbjct: 31 EIRRGPWTVEEDMKLVSYISLHGEGRWNSLSRSAGLNRTGKSCRLRWLNYLRP 83

[Close]

BLAST of Cp4.1LG16g06060 vs. TAIR 10
Match: AT3G53200.1 (myb domain protein 27 )

HSP 1 Score: 82.4 bits (202), Expect = 3.8e-16
Identity = 32/54 (59.26%), Postives = 44/54 (81.48%), Query Frame = 0


Query: 5  QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHP 59
          + +R+GPW E+ED +L+  + L G+RRWD +A VSGL R+GKSCRLRW+NYL+P
Sbjct: 7  ETLRRGPWLEEEDERLVKVISLLGERRWDSLAIVSGLKRSGKSCRLRWMNYLNP 60

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g06060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q53NK6	4.2e-28	35.78	Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS1 PE...	[more]
Q4JL84	3.6e-27	36.87	Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2	[more]
Q4JL76	2.0e-25	36.04	Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE...	[more]
Q9LX82	6.3e-24	83.05	Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1	[more]
Q9SCP1	5.4e-15	59.26	Transcription factor MYB27 OS=Arabidopsis thaliana OX=3702 GN=MYB27 PE=2 SV=1	[more]

BLAST of Cp4.1LG16g06060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023511995.1	9.07e-113	65.13	myb-related protein MYBAS1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022943941.1	9.07e-113	65.13	transcription factor MYB59-like [Cucurbita moschata]	[more]
XP_022986918.1	2.47e-110	63.98	transcription factor MYB59-like [Cucurbita maxima]	[more]
KAG7010573.1	4.39e-109	80.83	Transcription factor MYB59, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022148320.1	2.53e-94	57.68	transcription factor MYB59 isoform X1 [Momordica charantia]	[more]

BLAST of Cp4.1LG16g06060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FT29	4.39e-113	65.13	transcription factor MYB59-like OS=Cucurbita moschata OX=3662 GN=LOC111448512 PE...	[more]
A0A6J1JHY1	1.20e-110	63.98	transcription factor MYB59-like OS=Cucurbita maxima OX=3661 GN=LOC111484512 PE=4...	[more]
A0A6J1D2K9	1.22e-94	57.68	transcription factor MYB59 isoform X1 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A0A0KCU4	5.05e-82	67.35	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G30324...	[more]
A0A6J1L3T5	1.76e-78	54.30	transcription factor MYB59-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Cp4.1LG16g06060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59780.3	2.5e-28	36.87	myb domain protein 59	[more]
AT3G46130.1	4.5e-25	83.05	myb domain protein 48	[more]
AT2G47190.1	4.1e-18	64.29	myb domain protein 2	[more]
AT1G48000.1	1.3e-16	58.49	myb domain protein 112	[more]
AT3G53200.1	3.8e-16	59.26	myb domain protein 27	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 8..58 e-value: 1.8E-15 score: 67.4
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 4..56 score: 11.021576
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 11..56 e-value: 2.64637E-12 score: 56.4298
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 9..56 e-value: 1.1E-15 score: 57.5
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 4..60 score: 23.652349
None	No IPR available	GENE3D	1.10.10.60		coord: 9..59 e-value: 4.3E-15 score: 57.4
None	No IPR available	PANTHER	PTHR45675:SF7	TRANSCRIPTION FACTOR MYB48-RELATED	coord: 69..150
None	No IPR available	PANTHER	PTHR45675:SF7	TRANSCRIPTION FACTOR MYB48-RELATED	coord: 5..59
IPR044676	MYB-like transcription factor EOBI/EOBII-like, plant	PANTHER	PTHR45675	MYB TRANSCRIPTION FACTOR-RELATED-RELATED	coord: 69..150
IPR044676	MYB-like transcription factor EOBI/EOBII-like, plant	PANTHER	PTHR45675	MYB TRANSCRIPTION FACTOR-RELATED-RELATED	coord: 5..59
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 6..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g06060.1	Cp4.1LG16g06060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding