Cp4.1LG16g05950 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCCAAAGGCAGATAAGAAACCCGCCGAGAAGAAGCCAGCCGCTGAAAAGCCGGCCGAGGAGAAGAAATCTGTCGCGGAGAAAGCTCCGGCGGAGAAAAAGCCCAAGGCTGGAAAGAAGCTTCCGAAGGAAGGCGGTGCCGCTGCTGCCGGAGATAAGAAGAAGAAGAGGTCGAAGAAGAGCGTAGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAAGTTCATCCTGACATCGGTATTTCCAGCAAGGCCATGGGTATCATGAACAGTTTCATCAACGATATCTTTGAGAAACTCGCTCAGGAGTCATCTAAGTTGGCTCGCTACAACAAGAAACCTACCATAACTTCAAGGGAGATCCAGACAGCCGTCAGGCTTGTTCTTCCCGGTGAGTTGGCCAAGCACGCTGTGTCTGAGGGTACTAAGGCAGTAACTAAGTTCACAAGTTCTTAGAATCTGAATTAGGCGAAGCAATGGATGCCGATAGGTGCCTTTAGGTGAAAGAGATTATTAAGAAATTAGGGTTAGGAGCTCTGTTTTACCTATTATGATGCGTTCCTGTATTTGATAGCTTTTGGATTTGACAAGTTTTCTCATATAGATGCTTATGATTTGTAAATTCTACTTTTATGTGCTTGTAATGGAAGTGATTTTGTTCATCTGTCTCTTCTCGTCAAAAGAAAATTATCTGGCTGATCTTCGGAGCGGAATTGTTGATCTCTTACCTTTTGACCTTGCTGATACTCGTCTGAATCATATCATTGGGAATTTGTTCCTTGCCGTCAAAAATCAGTGTTCGCCCGTTGAATTTGGTGCTCTTGGATTTGTTCTTCCTGGATTGAGATTGGTTAGCTGCATCATAAACTTTTGCACACTTTCCATCGTGATTAATTAAGCTGTCTCATCTATGCATACATGTTTTAGATTCTTGGACTTTTTGTAGCCTTATTCTCAACTGATCTCTCATCAGTGTCTATGCTGTTTGGTATCTTGATTTGTTTTTGCTTGAATACTTGGGATTTCTCAAGTATGGCGTAGAAATTTGATTTGACATTGGTTTTAATTGTGTTTTTTTTGGCTGTAATCTGTCAAGCACGAGATGAATTTGGCTACACAATACAAGAAAGTGCTGGTGCTGCTACTGCTGGCTGCCACTTGAAGACTTGTTGGGTTAGATGTTCTTGCTTGTTCTTTGATTATTTTGAAATCGTAAATAACCATGATTGTTGCCTCAATAATACTCTATTACTTAGTATCATCTTAGTGCTGCCATTGCTGAATTTTCAAGGAATATTTACATTTCTTAAACTTGTCGTTCATCAGATCGATATTTTTGTTTGTTAGCTTGTCTGCATCATATAATCAGAAGACTCCAAATTTGATGGTGTCTTCTGTGAAAGACTGAGTTTATGTTGTGGGTGGTAACCGCGGTGCATTCTGTCTCTTTCTCCAACCTCAAGAATAGATATCTATTTTTTTTTTTTTTTTTACACTAATCGTAGGTTTGAAATAGGGTCTCGGCGTTCTTTTGCAACATGATCATACTATCTACTTTTCTTGAAGCATTTTTAAGAATCTAGACTATCTTTACAAACTAACACGGATTCTTAACACTTTTTTGTCTCTACTCACGTGTTCTTTAGAAATTTTTTTAAGAGATCACTTAGCATAAGATTGTTCTATTTAGCTAAACATGCTTTAATCTTAGAGTTTTTATGATCGAGCCATTAAAGGAGAAGTTGTTGGATCTTATATGTATAGGTCGTGTGTCGTAGCTTTCAATTCTTGTAAGTCCTTAACCGTACTCTCTTTAGTATCACTCTCATTCGTTTCAATCATGTATCTTCCTTTACTCGAGTGATACATTAATAGTTGTGGGTTTTGTTTTTTGGGATCATAACCCTTATATTTGGTAATGAATTCGTATATTTATCGGTATTAATGTCGGTAGTGCCCCTTATTTATAATTGAATCTTCCTTTACTCTAGTGATACATTAATAGCGATGGGTTTTGTTTTTTGGGATCATAACACTTATATTTGGTAATGAATTCTTATATTTATCGGTATTAATGTCGGTAGTGTCCCTTATTTATAATTGAATCTTCCTTTACTCAAGTGATACATGGGTTTTGATTTTTGGGATCATAACACTTATATTTGGTAATGAATTCGTATATTTATCGGTATTAATGTCGGTAGTGTCCCTTATTTATACACTCGGGATCTTTCCTTTATGACCATTTTGAGCATAAGATTTCATAGCTTAATATCTATAGTGTCCTTTATTTATGTACTCATGTCCATTTTGAGTACAAACTTATCGAGAGTGTCCTTTATTTATATACTTAGGATTTCCGTTATGATATTATCTATTTTGAGTATAAGTTTTTATAGTTCAACTTCAATACTATCCCTTATTTATATACTTATGATCTTCTAGGCTTAAAAAGTTTTTTTTTTCTCTTTTTAGGTACTAAAAAAACGTGGCAAGCTGATATGAATGAAACAGAGAAGAATCTTCCTTAGGCAGTTTGTTAAACGTGCACCCATTTTCCCTCCATCTTCAAATAAAATAACCCCTCGATGCCATACCCACATTCATCCGCATCACAAGCCTCGTCGTTTACTTTCTTCTTCCTTCTCCAATGGCCATCTCCATCCTCCACCGCTTCTCTCTGTATCCCCCTCTCTGTCTCATCGCCGCCAAGTGGACGGCGCTACTAACGCTAACAGCCGCCGTGGCCTCCTTTGCTCCAGTGTTTATTTTCACCAATGCGACGTCGCTTTCTTCGTCGTTTTCCAAATCATGCGGTCGTGACGGCTACATCAGGATCCCGCTGGACCTTCCCGGCGATGTTCTGTGCGTGCCGGCGAAAATGGTGAATCGGTCCAATTTGGATTTCTTCGTTCCTACTGTGTTTGCGGCACTCGGCGTCGGCGTTTCCGCTTGCTTCGTTAGATCCGTTGGATTGTGGGAGAATCCTCAGACTTCTCGATTCGATCACAGTTGATGCAATTTCAAGAACAAAGGCTCTTTGTGTTCATTCATGTCGCGGACGATATTCGATCGATCCTCGGCTCTGTTTTGAATTTTGCCGATGAAAATTTGGGGTTGGTGCCGCTGCTCAGAGCAAGAGGTCTGAAAAATTTATTGGGCCTTGAAACGGCCCATTCAAAATGGACTGCTGCATGATACTGGGCCCAAGCCCAACTTTGAATGGGCCTCTTTCTATTTTGTGTCAATTGTGTTTAGAAAAATTTAAAATAAAAATTAAGCGTCTTAATTAAAAATTAATACATTTTAAATTTTGTATAGAAAATAACTATTTGATGAGGCATAAAAAAGTTAAAATT ATGGCGCCAAAGGCAGATAAGAAACCCGCCGAGAAGAAGCCAGCCGCTGAAAAGCCGGCCGAGGAGAAGAAATCTGTCGCGGAGAAAGCTCCGGCGGAGAAAAAGCCCAAGGCTGGAAAGAAGCTTCCGAAGGAAGGCGGTGCCGCTGCTGCCGGAGATAAGAAGAAGAAGAGGTCGAAGAAGAGCGTAGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAAGTTCATCCTGACATCGGTATTTCCAGCAAGGCCATGGGTATCATGAACAGTTTCATCAACGATATCTTTGAGAAACTCGCTCAGGAGTCATCTAAGTTGGCTCGCTACAACAAGAAACCTACCATAACTTCAAGGGAGATCCAGACAGCCGTCAGGCTTGTTCTTCCCGGTGAGTTGGCCAAGCACGCTGTGTCTGAGGGTACTAAGGCAATGCTTATGATTTGTAAATTCTACTTTTATGTGCTTGTAATGGAAGTGATTTTGTTCATCTGTCTCTTCTCGTCAAAAGAAAATTATCTGGCTGATCTTCGGAGCGGAATTGTTGATCTCTTACCTTTTGACCTTGCTGATACTCGTCTGAATCATATCATTGGGAATTTGTTCCTTGCCGTCAAAAATCAGTGTTCGCCCGTTGAATTTGGTGCTCTTGGATTTGTTCTTCCTGGATTGAGATTGATTCTTGGACTTTTTGTAGCCTTATTCTCAACTGATCTCTCATCAGTGTCTATGCTGTTTGGTACTAAAAAAACGTGGCAAGCTGATATGAATGAAACAGAGAAGAATCTTCCTTAGGCAGTTTGTTAAACGTGCACCCATTTTCCCTCCATCTTCAAATAAAATAACCCCTCGATGCCATACCCACATTCATCCGCATCACAAGCCTCGTCGTTTACTTTCTTCTTCCTTCTCCAATGGCCATCTCCATCCTCCACCGCTTCTCTCTGTATCCCCCTCTCTGTCTCATCGCCGCCAAGTGGACGGCGCTACTAACGCTAACAGCCGCCGTGGCCTCCTTTGCTCCAGTGTTTATTTTCACCAATGCGACGTCGCTTTCTTCGTCGTTTTCCAAATCATGCGGTCGTGACGGCTACATCAGGATCCCGCTGGACCTTCCCGGCGATGTTCTGTGCGTGCCGGCGAAAATGGTGAATCGGTCCAATTTGGATTTCTTCGTTCCTACTGTGTTTGCGGCACTCGGCGTCGGCGTTTCCGCTTGCTTCGTTAGATCCGTTGGATTGTGGGAGAATCCTCAGACTTCTCGATTCGATCACAGTTGATGCAATTTCAAGAACAAAGGCTCTTTGTGTTCATTCATGTCGCGGACGATATTCGATCGATCCTCGGCTCTGTTTTGAATTTTGCCGATGAAAATTTGGGGTTGGTGCCGCTGCTCAGAGCAAGAGGTCTGAAAAATTTATTGGGCCTTGAAACGGCCCATTCAAAATGGACTGCTGCATGATACTGGGCCCAAGCCCAACTTTGAATGGGCCTCTTTCTATTTTGTGTCAATTGTGTTTAGAAAAATTTAAAATAAAAATTAAGCGTCTTAATTAAAAATTAATACATTTTAAATTTTGTATAGAAAATAACTATTTGATGAGGCATAAAAAAGTTAAAATT ATGGCGCCAAAGGCAGATAAGAAACCCGCCGAGAAGAAGCCAGCCGCTGAAAAGCCGGCCGAGGAGAAGAAATCTGTCGCGGAGAAAGCTCCGGCGGAGAAAAAGCCCAAGGCTGGAAAGAAGCTTCCGAAGGAAGGCGGTGCCGCTGCTGCCGGAGATAAGAAGAAGAAGAGGTCGAAGAAGAGCGTAGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAAGTTCATCCTGACATCGGTATTTCCAGCAAGGCCATGGGTATCATGAACAGTTTCATCAACGATATCTTTGAGAAACTCGCTCAGGAGTCATCTAAGTTGGCTCGCTACAACAAGAAACCTACCATAACTTCAAGGGAGATCCAGACAGCCGTCAGGCTTGTTCTTCCCGGTGAGTTGGCCAAGCACGCTGTGTCTGAGGGTACTAAGGCAATGCTTATGATTTGTAAATTCTACTTTTATGTGCTTGTAATGGAAGTGATTTTGTTCATCTGTCTCTTCTCGTCAAAAGAAAATTATCTGGCTGATCTTCGGAGCGGAATTGTTGATCTCTTACCTTTTGACCTTGCTGATACTCGTCTGAATCATATCATTGGGAATTTGTTCCTTGCCGTCAAAAATCAGTGTTCGCCCGTTGAATTTGGTGCTCTTGGATTTGTTCTTCCTGGATTGAGATTGATTCTTGGACTTTTTGTAGCCTTATTCTCAACTGATCTCTCATCAGTGTCTATGCTGTTTGGTACTAAAAAAACGTGGCAAGCTGATATGAATGAAACAGAGAAGAATCTTCCTTAG MAPKADKKPAEKKPAAEKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAAGDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAMLMICKFYFYVLVMEVILFICLFSSKENYLADLRSGIVDLLPFDLADTRLNHIIGNLFLAVKNQCSPVEFGALGFVLPGLRLILGLFVALFSTDLSSVSMLFGTKKTWQADMNETEKNLP Homology
BLAST of Cp4.1LG16g05950 vs. ExPASy Swiss-Prot
Match: O22582 (Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3) HSP 1 Score: 235.7 bits (600), Expect = 5.9e-61 Identity = 135/147 (91.84%), Postives = 140/147 (95.24%), Query Frame = 0
BLAST of Cp4.1LG16g05950 vs. ExPASy Swiss-Prot
Match: P40283 (Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5) HSP 1 Score: 233.4 bits (594), Expect = 2.9e-60 Identity = 134/147 (91.16%), Postives = 138/147 (93.88%), Query Frame = 0
BLAST of Cp4.1LG16g05950 vs. ExPASy Swiss-Prot
Match: O23629 (Histone H2B.6 OS=Arabidopsis thaliana OX=3702 GN=H2B PE=1 SV=3) HSP 1 Score: 232.6 bits (592), Expect = 5.0e-60 Identity = 134/147 (91.16%), Postives = 137/147 (93.20%), Query Frame = 0
BLAST of Cp4.1LG16g05950 vs. ExPASy Swiss-Prot
Match: Q1S9I9 (Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3) HSP 1 Score: 232.3 bits (591), Expect = 6.6e-60 Identity = 133/147 (90.48%), Postives = 139/147 (94.56%), Query Frame = 0
BLAST of Cp4.1LG16g05950 vs. ExPASy Swiss-Prot
Match: Q1SWQ1 (Probable histone H2B.2 OS=Medicago truncatula OX=3880 PE=3 SV=3) HSP 1 Score: 228.4 bits (581), Expect = 9.5e-59 Identity = 131/147 (89.12%), Postives = 137/147 (93.20%), Query Frame = 0
BLAST of Cp4.1LG16g05950 vs. NCBI nr
Match: XP_023512034.1 (histone H2B.11 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 262 bits (670), Expect = 1.41e-83 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g05950 vs. NCBI nr
Match: XP_022943869.1 (histone H2B.11-like [Cucurbita moschata]) HSP 1 Score: 262 bits (670), Expect = 1.41e-83 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g05950 vs. NCBI nr
Match: KAG6570724.1 (Histone H2B.6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 259 bits (661), Expect = 1.70e-83 Identity = 173/266 (65.04%), Postives = 178/266 (66.92%), Query Frame = 0
BLAST of Cp4.1LG16g05950 vs. NCBI nr
Match: XP_022986974.1 (histone H2B.11-like [Cucurbita maxima]) HSP 1 Score: 261 bits (667), Expect = 4.01e-83 Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g05950 vs. NCBI nr
Match: KAG7010568.1 (Histone H2B.6, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 262 bits (670), Expect = 4.67e-83 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g05950 vs. ExPASy TrEMBL
Match: A0A6J1FVH6 (Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111448469 PE=3 SV=1) HSP 1 Score: 262 bits (670), Expect = 6.83e-84 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g05950 vs. ExPASy TrEMBL
Match: A0A6J1JHJ9 (Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111484551 PE=3 SV=1) HSP 1 Score: 261 bits (667), Expect = 1.94e-83 Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g05950 vs. ExPASy TrEMBL
Match: A0A0A0KHC9 (Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_6G193620 PE=3 SV=1) HSP 1 Score: 253 bits (645), Expect = 3.22e-82 Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of Cp4.1LG16g05950 vs. ExPASy TrEMBL
Match: A0A2G5CM59 (Histone H2B OS=Aquilegia coerulea OX=218851 GN=AQUCO_04500159v1 PE=3 SV=1) HSP 1 Score: 252 bits (643), Expect = 6.71e-82 Identity = 139/146 (95.21%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of Cp4.1LG16g05950 vs. ExPASy TrEMBL
Match: A0A6J1G728 (Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111451349 PE=3 SV=1) HSP 1 Score: 251 bits (641), Expect = 1.31e-81 Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of Cp4.1LG16g05950 vs. TAIR 10
Match: AT5G59910.1 (Histone superfamily protein ) HSP 1 Score: 233.4 bits (594), Expect = 2.1e-61 Identity = 134/147 (91.16%), Postives = 138/147 (93.88%), Query Frame = 0
BLAST of Cp4.1LG16g05950 vs. TAIR 10
Match: AT3G45980.1 (Histone superfamily protein ) HSP 1 Score: 232.6 bits (592), Expect = 3.6e-61 Identity = 134/147 (91.16%), Postives = 137/147 (93.20%), Query Frame = 0
BLAST of Cp4.1LG16g05950 vs. TAIR 10
Match: AT1G07790.1 (Histone superfamily protein ) HSP 1 Score: 224.9 bits (572), Expect = 7.4e-59 Identity = 130/147 (88.44%), Postives = 137/147 (93.20%), Query Frame = 0
BLAST of Cp4.1LG16g05950 vs. TAIR 10
Match: AT3G46030.1 (Histone superfamily protein ) HSP 1 Score: 222.6 bits (566), Expect = 3.7e-58 Identity = 129/147 (87.76%), Postives = 132/147 (89.80%), Query Frame = 0
BLAST of Cp4.1LG16g05950 vs. TAIR 10
Match: AT2G28720.1 (Histone superfamily protein ) HSP 1 Score: 221.1 bits (562), Expect = 1.1e-57 Identity = 129/147 (87.76%), Postives = 134/147 (91.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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