Cp4.1LG16g05760 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g05760
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	zinc finger protein CONSTANS-like isoform X2
Location	Cp4.1LG16: 6542377 .. 6543186 (+)
RNA-Seq Expression	Cp4.1LG16g05760
Synteny	Cp4.1LG16g05760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTCTCCCCGTTTCTTTCCGGCGTAACGCATTCCTCCGCCGACCTCGCAGGCGTTGATTTTGACTGGTTGCCCGATTCCTCTATCAAGCTTTGGAACTCTGAAGTTTCCGACAGTTGTGGCGACGGTTCACCGACTTCTCCGCCGCAACCCCTAACATTTCGTCGACCAACTAATAGATTTTTATTAGACCAATCTTTTAGCCTCCTTAACCCTTCTCTCCAAACAACCAGTAGTCTCCACCGCACCTTTTCTTCATCGTCGTCATCGCCACCGCCCCCCACAGCCGAGAGTCTTCCCAGCCGGCCGCTCTTCCCAGCCGGAGATTTTAAGGTGAGACTTGTAAAAATGAATGATTAATGATAAGGGACACTACCTTCGTACTAAGCATTTTGAGAGCTTATGTTTAAAGCGTAGGATCATATTCGCATCATTATAGTGAAAAATGCAAAGATCACATCCAATAATTTCAATTTAAGTCGTTCAAAATGTTACATTTTTATCGTTCCGAACATGTTCTAAGCTGCTATAACCATAGGTACCCTCCATGCAAAGGATCATTAAAAATATATATATATATGATATTATTAAATGGGGTTTGAATAATGAGTTCAGGAATGGGGATGGCAAAGGAATAAGCAGAGAGCAGAGAGTCCAGTTTCATGCGAAAGTAGCATCACCATTGAAGGGCTAAGCAGAGCTTGCAGATACAGTCCAGAAGAGAAGAAGGAAAGGATTGAAAGATATAAGAGCAAAAGAAACCAGAGGAACTTCAACAAGAAGATCAAGGTAAAGTCTTCTACTTGA

mRNA sequence

ATGGCCTTCTCCCCGTTTCTTTCCGGCGTAACGCATTCCTCCGCCGACCTCGCAGGCGTTGATTTTGACTGGTTGCCCGATTCCTCTATCAAGCTTTGGAACTCTGAAGTTTCCGACAGTTGTGGCGACGGTTCACCGACTTCTCCGCCGCAACCCCTAACATTTCGTCGACCAACTAATAGATTTTTATTAGACCAATCTTTTAGCCTCCTTAACCCTTCTCTCCAAACAACCAGTAGTCTCCACCGCACCTTTTCTTCATCGTCGTCATCGCCACCGCCCCCCACAGCCGAGAGTCTTCCCAGCCGGCCGCTCTTCCCAGCCGGAGATTTTAAGGAATGGGGATGGCAAAGGAATAAGCAGAGAGCAGAGAGTCCAGTTTCATGCGAAAGTAGCATCACCATTGAAGGGCTAAGCAGAGCTTGCAGATACAGTCCAGAAGAGAAGAAGGAAAGGATTGAAAGATATAAGAGCAAAAGAAACCAGAGGAACTTCAACAAGAAGATCAAGGTAAAGTCTTCTACTTGA

Coding sequence (CDS)

ATGGCCTTCTCCCCGTTTCTTTCCGGCGTAACGCATTCCTCCGCCGACCTCGCAGGCGTTGATTTTGACTGGTTGCCCGATTCCTCTATCAAGCTTTGGAACTCTGAAGTTTCCGACAGTTGTGGCGACGGTTCACCGACTTCTCCGCCGCAACCCCTAACATTTCGTCGACCAACTAATAGATTTTTATTAGACCAATCTTTTAGCCTCCTTAACCCTTCTCTCCAAACAACCAGTAGTCTCCACCGCACCTTTTCTTCATCGTCGTCATCGCCACCGCCCCCCACAGCCGAGAGTCTTCCCAGCCGGCCGCTCTTCCCAGCCGGAGATTTTAAGGAATGGGGATGGCAAAGGAATAAGCAGAGAGCAGAGAGTCCAGTTTCATGCGAAAGTAGCATCACCATTGAAGGGCTAAGCAGAGCTTGCAGATACAGTCCAGAAGAGAAGAAGGAAAGGATTGAAAGATATAAGAGCAAAAGAAACCAGAGGAACTTCAACAAGAAGATCAAGGTAAAGTCTTCTACTTGA

Protein sequence

MAFSPFLSGVTHSSADLAGVDFDWLPDSSIKLWNSEVSDSCGDGSPTSPPQPLTFRRPTNRFLLDQSFSLLNPSLQTTSSLHRTFSSSSSSPPPPTAESLPSRPLFPAGDFKEWGWQRNKQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIKVKSST

Homology

[Close]

BLAST of Cp4.1LG16g05760 vs. NCBI nr
Match: XP_023511996.1 (uncharacterized protein LOC111776840 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 338 bits (866), Expect = 2.77e-115
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MAFSPFLSGVTHSSADLAGVDFDWLPDSSIKLWNSEVSDSCGDGSPTSPPQPLTFRRPTN 60
           MAFSPFLSGVTHSSADLAGVDFDWLPDSSIKLWNSEVSDSCGDGSPTSPPQPLTFRRPTN
Sbjct: 35  MAFSPFLSGVTHSSADLAGVDFDWLPDSSIKLWNSEVSDSCGDGSPTSPPQPLTFRRPTN 94

Query: 61  RFLLDQSFSLLNPSLQTTSSLHRTFSSSSSSPPPPTAESLPSRPLFPAGDFKEWGWQRNK 120
           RFLLDQSFSLLNPSLQTTSSLHRTFSSSSSSPPPPTAESLPSRPLFPAGDFKEWGWQRNK
Sbjct: 95  RFLLDQSFSLLNPSLQTTSSLHRTFSSSSSSPPPPTAESLPSRPLFPAGDFKEWGWQRNK 154

Query: 121 QRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 170
           QRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK
Sbjct: 155 QRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 204

[Close]

BLAST of Cp4.1LG16g05760 vs. NCBI nr
Match: KAG6570739.1 (Zinc finger protein CONSTANS-LIKE 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 320 bits (821), Expect = 2.03e-108
Identity = 162/170 (95.29%), Postives = 165/170 (97.06%), Query Frame = 0


Query: 1   MAFSPFLSGVTHSSADLAGVDFDWLPDSSIKLWNSEVSDSCGDGSPTSPPQPLTFRRPTN 60
           MAF PFLS V+HSSADLA VDFDWLP+SSIKLWNSEVSDSCGDGSPTSPPQPLTFRRPTN
Sbjct: 35  MAFYPFLSAVSHSSADLASVDFDWLPNSSIKLWNSEVSDSCGDGSPTSPPQPLTFRRPTN 94

Query: 61  RFLLDQSFSLLNPSLQTTSSLHRTFSSSSSSPPPPTAESLPSRPLFPAGDFKEWGWQRNK 120
           RFLLDQSFSLLNPSLQTT+ LHRTFSSSSSSPPPPTAESL SRPLFPAGDFKEWGWQRNK
Sbjct: 95  RFLLDQSFSLLNPSLQTTNILHRTFSSSSSSPPPPTAESLVSRPLFPAGDFKEWGWQRNK 154

Query: 121 QRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 170
           QRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK
Sbjct: 155 QRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 204

[Close]

BLAST of Cp4.1LG16g05760 vs. NCBI nr
Match: XP_022944274.1 (zinc finger protein CONSTANS-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 316 bits (809), Expect = 1.18e-107
Identity = 161/171 (94.15%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 1   MAFSPFLSGVTHSSADLAGVDFDWLPDSSIKLWNSEVSDSCGDGSPTSPPQPLTFRRPTN 60
           MAFSPFLS V+HSSADLA VDFDWLPDSSIKLWNSEVS+SCGDGSPTSPPQPLTFRRPTN
Sbjct: 1   MAFSPFLSAVSHSSADLASVDFDWLPDSSIKLWNSEVSNSCGDGSPTSPPQPLTFRRPTN 60

Query: 61  RFLLDQSFSLLNPSLQTTSSL-HRTFSSSSSSPPPPTAESLPSRPLFPAGDFKEWGWQRN 120
           RFLLDQSF LLNPSLQTT++L HRTFSSSSSSPPPP AESL SRPLFPAGDFKEWGWQRN
Sbjct: 61  RFLLDQSFGLLNPSLQTTNNLLHRTFSSSSSSPPPPAAESLVSRPLFPAGDFKEWGWQRN 120

Query: 121 KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 170
           KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK
Sbjct: 121 KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 171

[Close]

BLAST of Cp4.1LG16g05760 vs. NCBI nr
Match: XP_022944273.1 (uncharacterized protein LOC111448769 isoform X1 [Cucurbita moschata])

HSP 1 Score: 316 bits (809), Expect = 4.39e-107
Identity = 161/171 (94.15%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 1   MAFSPFLSGVTHSSADLAGVDFDWLPDSSIKLWNSEVSDSCGDGSPTSPPQPLTFRRPTN 60
           MAFSPFLS V+HSSADLA VDFDWLPDSSIKLWNSEVS+SCGDGSPTSPPQPLTFRRPTN
Sbjct: 1   MAFSPFLSAVSHSSADLASVDFDWLPDSSIKLWNSEVSNSCGDGSPTSPPQPLTFRRPTN 60

Query: 61  RFLLDQSFSLLNPSLQTTSSL-HRTFSSSSSSPPPPTAESLPSRPLFPAGDFKEWGWQRN 120
           RFLLDQSF LLNPSLQTT++L HRTFSSSSSSPPPP AESL SRPLFPAGDFKEWGWQRN
Sbjct: 61  RFLLDQSFGLLNPSLQTTNNLLHRTFSSSSSSPPPPAAESLVSRPLFPAGDFKEWGWQRN 120

Query: 121 KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 170
           KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK
Sbjct: 121 KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 171

[Close]

BLAST of Cp4.1LG16g05760 vs. NCBI nr
Match: XP_022986934.1 (two-component response regulator-like APRR9 isoform X2 [Cucurbita maxima])

HSP 1 Score: 308 bits (788), Expect = 1.87e-104
Identity = 158/171 (92.40%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 1   MAFSPFLSGVTHSSADLAGVDFDWLPDSSIKLWNSEVSDSCGDGSPTSPPQPLTFRRPTN 60
           MAFSPFLS V+HSSADLA VDFDWLPDSS+KLW SEVSDSCGDGS TSPPQPLTFRRPTN
Sbjct: 1   MAFSPFLSAVSHSSADLASVDFDWLPDSSVKLWKSEVSDSCGDGSATSPPQPLTFRRPTN 60

Query: 61  RFLLDQSFSLLNPSLQTTSSL-HRTFSSSSSSPPPPTAESLPSRPLFPAGDFKEWGWQRN 120
           RFLLDQSFSLLNPSL+TT++L HRTFSSSSSS PPPTAESL SRPLF AGDFKEWGWQRN
Sbjct: 61  RFLLDQSFSLLNPSLRTTNNLLHRTFSSSSSSTPPPTAESLVSRPLFQAGDFKEWGWQRN 120

Query: 121 KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 170
           KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK
Sbjct: 121 KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 171

[Close]

BLAST of Cp4.1LG16g05760 vs. ExPASy TrEMBL
Match: A0A6J1FWF0 (zinc finger protein CONSTANS-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448769 PE=4 SV=1)

HSP 1 Score: 316 bits (809), Expect = 5.70e-108
Identity = 161/171 (94.15%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 1   MAFSPFLSGVTHSSADLAGVDFDWLPDSSIKLWNSEVSDSCGDGSPTSPPQPLTFRRPTN 60
           MAFSPFLS V+HSSADLA VDFDWLPDSSIKLWNSEVS+SCGDGSPTSPPQPLTFRRPTN
Sbjct: 1   MAFSPFLSAVSHSSADLASVDFDWLPDSSIKLWNSEVSNSCGDGSPTSPPQPLTFRRPTN 60

Query: 61  RFLLDQSFSLLNPSLQTTSSL-HRTFSSSSSSPPPPTAESLPSRPLFPAGDFKEWGWQRN 120
           RFLLDQSF LLNPSLQTT++L HRTFSSSSSSPPPP AESL SRPLFPAGDFKEWGWQRN
Sbjct: 61  RFLLDQSFGLLNPSLQTTNNLLHRTFSSSSSSPPPPAAESLVSRPLFPAGDFKEWGWQRN 120

Query: 121 KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 170
           KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK
Sbjct: 121 KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 171

[Close]

BLAST of Cp4.1LG16g05760 vs. ExPASy TrEMBL
Match: A0A6J1FXW4 (uncharacterized protein LOC111448769 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448769 PE=4 SV=1)

HSP 1 Score: 316 bits (809), Expect = 2.13e-107
Identity = 161/171 (94.15%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 1   MAFSPFLSGVTHSSADLAGVDFDWLPDSSIKLWNSEVSDSCGDGSPTSPPQPLTFRRPTN 60
           MAFSPFLS V+HSSADLA VDFDWLPDSSIKLWNSEVS+SCGDGSPTSPPQPLTFRRPTN
Sbjct: 1   MAFSPFLSAVSHSSADLASVDFDWLPDSSIKLWNSEVSNSCGDGSPTSPPQPLTFRRPTN 60

Query: 61  RFLLDQSFSLLNPSLQTTSSL-HRTFSSSSSSPPPPTAESLPSRPLFPAGDFKEWGWQRN 120
           RFLLDQSF LLNPSLQTT++L HRTFSSSSSSPPPP AESL SRPLFPAGDFKEWGWQRN
Sbjct: 61  RFLLDQSFGLLNPSLQTTNNLLHRTFSSSSSSPPPPAAESLVSRPLFPAGDFKEWGWQRN 120

Query: 121 KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 170
           KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK
Sbjct: 121 KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 171

[Close]

BLAST of Cp4.1LG16g05760 vs. ExPASy TrEMBL
Match: A0A6J1JHG4 (two-component response regulator-like APRR9 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484524 PE=4 SV=1)

HSP 1 Score: 308 bits (788), Expect = 9.03e-105
Identity = 158/171 (92.40%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 1   MAFSPFLSGVTHSSADLAGVDFDWLPDSSIKLWNSEVSDSCGDGSPTSPPQPLTFRRPTN 60
           MAFSPFLS V+HSSADLA VDFDWLPDSS+KLW SEVSDSCGDGS TSPPQPLTFRRPTN
Sbjct: 1   MAFSPFLSAVSHSSADLASVDFDWLPDSSVKLWKSEVSDSCGDGSATSPPQPLTFRRPTN 60

Query: 61  RFLLDQSFSLLNPSLQTTSSL-HRTFSSSSSSPPPPTAESLPSRPLFPAGDFKEWGWQRN 120
           RFLLDQSFSLLNPSL+TT++L HRTFSSSSSS PPPTAESL SRPLF AGDFKEWGWQRN
Sbjct: 61  RFLLDQSFSLLNPSLRTTNNLLHRTFSSSSSSTPPPTAESLVSRPLFQAGDFKEWGWQRN 120

Query: 121 KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 170
           KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK
Sbjct: 121 KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 171

[Close]

BLAST of Cp4.1LG16g05760 vs. ExPASy TrEMBL
Match: A0A6J1JHZ7 (uncharacterized protein LOC111484524 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484524 PE=4 SV=1)

HSP 1 Score: 308 bits (788), Expect = 3.35e-104
Identity = 158/171 (92.40%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 1   MAFSPFLSGVTHSSADLAGVDFDWLPDSSIKLWNSEVSDSCGDGSPTSPPQPLTFRRPTN 60
           MAFSPFLS V+HSSADLA VDFDWLPDSS+KLW SEVSDSCGDGS TSPPQPLTFRRPTN
Sbjct: 1   MAFSPFLSAVSHSSADLASVDFDWLPDSSVKLWKSEVSDSCGDGSATSPPQPLTFRRPTN 60

Query: 61  RFLLDQSFSLLNPSLQTTSSL-HRTFSSSSSSPPPPTAESLPSRPLFPAGDFKEWGWQRN 120
           RFLLDQSFSLLNPSL+TT++L HRTFSSSSSS PPPTAESL SRPLF AGDFKEWGWQRN
Sbjct: 61  RFLLDQSFSLLNPSLRTTNNLLHRTFSSSSSSTPPPTAESLVSRPLFQAGDFKEWGWQRN 120

Query: 121 KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 170
           KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK
Sbjct: 121 KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 171

[Close]

BLAST of Cp4.1LG16g05760 vs. ExPASy TrEMBL
Match: A0A1S3CK56 (zinc finger protein CONSTANS-LIKE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501889 PE=4 SV=1)

HSP 1 Score: 216 bits (551), Expect = 3.72e-68
Identity = 126/176 (71.59%), Postives = 139/176 (78.98%), Query Frame = 0


Query: 1   MAFSPFLSGVTHSSADLAGVDFD-WLPDSSIKLWNSEVSDSCGDGSPTSPPQPLTFRRPT 60
           MAFSPFLS  +HSSAD+AGVDFD WLPDSSIKLWNSE SDSCGDGSP SPP+PL     T
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NRFLLDQSFSLLN-PSLQTT--SSLHRTFSSSSSSPPPPTAESLPSRPLFPAGDFKEWGW 120
           N FLL QSF LLN  SLQ+   S L RTFSSS S PP    +   +RPLFPAGDF++   
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQK--- 120

Query: 121 QRNKQRA-ESPVSCESSITI-EGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 170
           + N +R  ESPVSCESSITI EG+SRACRYSPEEKKERIERY++KRNQRNFNKKIK
Sbjct: 121 KNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIK 173

[Close]

BLAST of Cp4.1LG16g05760 vs. TAIR 10
Match: AT5G59990.2 (CCT motif family protein )

HSP 1 Score: 62.8 bits (151), Expect = 3.2e-10
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 0


Query: 75  LQTTSSLHRTFSSS-SSSPPPPTAESLPSRPLFPAGDFKEWGWQRNKQRAESPVSCESSI 134
           +Q + S H  FS + +++      +  P R    AGD       R+ +R  S V  ES+ 
Sbjct: 93  MQRSVSSHNGFSGNYTAAHDFVNDDDGPVRRALSAGDL-----PRSSRRESSTVWSESNA 152

Query: 135 TIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIKV 172
            IEG+S+A +YSPEEKKE+IE+Y+SKRN RNFNK+IKV
Sbjct: 153 IIEGMSKAYKYSPEEKKEKIEKYRSKRNLRNFNKRIKV 185

[Close]

BLAST of Cp4.1LG16g05760 vs. TAIR 10
Match: AT5G59990.1 (CCT motif family protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09
Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 0


Query: 75  LQTTSSLHRTFSSS-SSSPPPPTAESLPSRPLFPAGDFKEWGWQRNKQRAESPVSCESSI 134
           +Q + S H  FS + +++      +  P R    AGD       R+ +R  S V  ES+ 
Sbjct: 93  MQRSVSSHNGFSGNYTAAHDFVNDDDGPVRRALSAGDL-----PRSSRRESSTVWSESNA 152

Query: 135 TIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIK 171
            IEG+S+A +YSPEEKKE+IE+Y+SKRN RNFNK+IK
Sbjct: 153 IIEGMSKAYKYSPEEKKEKIEKYRSKRNLRNFNKRIK 184

[Close]

BLAST of Cp4.1LG16g05760 vs. TAIR 10
Match: AT1G63820.1 (CCT motif family protein )

HSP 1 Score: 46.2 bits (108), Expect = 3.1e-05
Identity = 32/74 (43.24%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 103 RPLFPAGDFKEWGWQRNKQRA-ESPVSCESSITI-----EGLSRACRYSPEEKKERIERY 162
           R ++  GD +  G     QR+  SP++ ESS T      E   R  RYS EE+KE+I +Y
Sbjct: 140 RRVYSTGDLQNLGRDFTGQRSYSSPLAAESSPTTVFSGDEQSLRVGRYSSEERKEKISKY 199

Query: 163 KSKRNQRNFNKKIK 171
           ++KR QRNF K IK
Sbjct: 200 RAKRTQRNFTKTIK 213

[Close]

BLAST of Cp4.1LG16g05760 vs. TAIR 10
Match: AT3G12890.1 (activator of spomin::LUC2 )

HSP 1 Score: 42.7 bits (99), Expect = 3.4e-04
Identity = 30/69 (43.48%), Postives = 38/69 (55.07%), Query Frame = 0


Query: 103 RPLF-PAGDFKEWGWQRNKQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRN 162
           +PLF PA   + WG            + E  I  E  ++  RYS EE+K+RI RY  K+N
Sbjct: 104 KPLFRPATGEQSWG------------NSEGGIQAEPNTKVGRYSVEERKDRIMRYLKKKN 160

Query: 163 QRNFNKKIK 171
           QRNFNK IK
Sbjct: 164 QRNFNKTIK 160

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g05760 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG16g05760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023511996.1	2.77e-115	100.00	uncharacterized protein LOC111776840 [Cucurbita pepo subsp. pepo]	[more]
KAG6570739.1	2.03e-108	95.29	Zinc finger protein CONSTANS-LIKE 3, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022944274.1	1.18e-107	94.15	zinc finger protein CONSTANS-like isoform X2 [Cucurbita moschata]	[more]
XP_022944273.1	4.39e-107	94.15	uncharacterized protein LOC111448769 isoform X1 [Cucurbita moschata]	[more]
XP_022986934.1	1.87e-104	92.40	two-component response regulator-like APRR9 isoform X2 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG16g05760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FWF0	5.70e-108	94.15	zinc finger protein CONSTANS-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1FXW4	2.13e-107	94.15	uncharacterized protein LOC111448769 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JHG4	9.03e-105	92.40	two-component response regulator-like APRR9 isoform X2 OS=Cucurbita maxima OX=36...	[more]
A0A6J1JHZ7	3.35e-104	92.40	uncharacterized protein LOC111484524 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3CK56	3.72e-68	71.59	zinc finger protein CONSTANS-LIKE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Cp4.1LG16g05760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59990.2	3.2e-10	44.90	CCT motif family protein	[more]
AT5G59990.1	1.2e-09	44.33	CCT motif family protein	[more]
AT1G63820.1	3.1e-05	43.24	CCT motif family protein	[more]
AT3G12890.1	3.4e-04	43.48	activator of spomin::LUC2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..175
None	No IPR available	PANTHER	PTHR31319:SF76	CCT MOTIF PROTEIN	coord: 99..171
None	No IPR available	PANTHER	PTHR31319	ZINC FINGER PROTEIN CONSTANS-LIKE 4	coord: 99..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g05760.1	Cp4.1LG16g05760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009909	regulation of flower development
cellular_component	GO:0005634	nucleus