Cp4.1LG16g05320 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCGTCTTAACCAATTAAGTTATGTTCGGGGTGTTGTCGTTATAAAACTTTGATGAGTTATGGGAGTTGGTATTGAGGTGTGTATGAGAAACAAAAGCAATAATGGAGGAGTTGGGGCTTCTGATGCATAGCAGAAAGTGCAATATATCTTTGTTGATCCAAAGCTCTGCTTATATGGGACGACAGTGATGCATGTAGCAAAAAGAAGCAGCAGCAGCTCAGATCACCCATCCCTTTGCTCAACACACCATGTCTCTTCCTACATCCCAACGACGTGGAAAAAAACATTAAACAAAACCAAACTTTGAACGCTCTTACAATCTTGCATGCATCTCTACTGTCTACCATGTTTTTTTCTTAATGTTTTATGATCAAACACTTTGAACCCTTTAGAATTTGGCCACTTTTTCTATCAATTAATCGAATTTAAGAACAACCCATTTCAATTTGAGATGCATATCATGTAAAGCCGACATCTTTTTGGTTATTGAGTCAAAAATAAAGGCAAAAGGAAGGGAAGAAAGGTATTAAAGCTAGTTTTTTCACACAATTTTGGCGCAAGAAAAGAAACGATATTTTTATTAGCGAATAAGATTGCTGAATTTCAGTCGAGGTAATGCAGTCACTTTCCCCTGTCCTTCTCAAAACAGTGGACCAATGAGAGAGAGAGAGGAATTAGCTGCGTCAATATGTTTGGTCCTGTGCTGTGCAGCGCAGCTATATATGTAACCACGCACATTCTTGTTCCTCCACCAACAGGTACCACACCACAACACTGAATCTGAGGCAATTTCCAACAATGGAGAGGGAAAATGAACCCAAATTACCCATTTTCAAGAGGATTTGTGTGTTCTGTGGCAGTAGCCCTGGTAAGAAGACTAGCTATAAAGATGCAGCCATTGCCCTTGCAAAAGAACTTGTAATTTCTCGCTTCCCCCCTTTTCAACTCCCTCTGTTTTCAAATGGGTCGTTCATAGTTTTGTAATTGAAAGATGTTTCAATGGTTTAGGTTTCCAGGAATATTGATCTTGTTTATGGTGGAGGTAGCGTTGGATTGATGGGGTTGGTATCCCAAGCTGTTCATAACGGTGGCCGCCATGTTGTTGGGTTAGCTTCCTTTTAGCTTCCTTTTCCCCTCCTTTTTCCTTTTCATACTTAGACTAAACGTTGTTTTCTTTCTGGGTTTTGTTTGTAGAGTCATTCCCAAGACCCTGATGCCAAGAGAGGTATGTCACTGTTATATAAACCATGCCATTCACTTAGCTACAGAGACTTGACGCTCTGTTCTTGCCTTTGCAGATAACTGGAGAGACGGTGGGAGAAGTGCAGGCGGTGGCAGACATGCACCAAAGGAAGGCCGAGATGGCTAGGCGGTCTGATGCATTTATCGCCTTGCCTGGTTTGATACTCTTATCTGCATTCCCCCATGACATTCATTCAAAGCTTCTTTATCTTTAATCACTATGAGTACTTTGTCTCTTTGCTGCTCCATGTCTTACATTCACACGCTTGTTCCTCCTCGTTTTAGCCCTACAAAAGCTTAGTATTAACCATAAAGAAAGGCTGTGGTAGGCCTGGCCTCTTTGGGGCCCAAGCTTAGAGGGGTGTAGGCAAAATAGAGTTAGACTTAACCCAAGATTTAAATGCGTAGCTGCTCTGTGATACAGGGTCCCTGCCTTTATGCAGATGGTCCCTGACTCCCCTGTTTTTCCCCCACTTCCTTGACATTACCTTTTAATGGGATCGTTTTGTTGGGCGAGGAGGACGAAACATTTCTTATAAGGGTGTGGAATGAGGCTGATGACGATATGTAACGGCACAAAGCGGATATTATCTAGTAACGGTGGCCTTGGACTATTATAAATGGTATCAGAGCGAGATGGTGCGAGGCACTGATCGGAGTAGGGTTAGACCCTCTTCATGGTAGATGCGTTTTAAAACTGTGAGGCTGACAACAATACGTAACGGGCTAAAGTGGACAATATTTGCTAGTGGTGGATTTGGGTTGTTACAAATGGTATCAAAGCTAGTTACTAGATGGTGCGAGGCACTGGTCAGAGTAACGCTAGACTCTCTGTTTTAAAACCGTTATAATACGTAATGGGCTAAAGCGGATAATATCTGTTAGTGGTGGGCTTGACCTTTTACAAATAGTATCAAAGCCAGATACCGATCGGTGTGCCAGCCAGGACGGTGGGCCCCAAGGGGGGTGGATTGTGAGATCTCACATCGGTTGAAAATGAGAACGAAGCATCCCTTACAAGGGTATGGAAACCTCTCCCTAACATATGTATTTTAAAACTATAAGACCGAGTGGTATGCCAACGAGGACGCTAGCCCCAAGGGGGATGGATTGTGAGATCCCACATTGGTTAGAGAAGAGAACGAAACATTTCTTATAAGGGCGTGGAAACCTCTTCCTAACATACGCATTAACTGTGAGAGTGACAGCGATACGTAACGAACCAAAACAAACAATATCTACTAGTGATAAGCTTGAGCGGTTAAAGGATCCAATATCTGAGCCCATGGCATCATGGGCTCATGAACATTTAGCCTCAAATCATCATCCTCACACTTGGTTATTAGTATTGAAATTGTGGGGTTTGGCCATTGCAGGTGGGTATGGAACTTTAGAAGAGCTGCTTGAAGTAATCACCTGGGCCCAACTCGGCATTCATGATAAACCAGTAAGTCAAATGTTCATATTCTTTGAAGCTATGAATCAAGCATTCATTAACAACATGAGCGCAAGTTCTTTCAGGTAGGACTGTTGAATGTGGATGGATATTACAACTCCTTGCTGTCCTTCATAGATGAAGCTGTAGAGGAAGGTTTCATCAGTCCAAGTGCACGCCATATTATTGTATCTGCACCTAATGCAGAGGAGTTAGTGAAGAACATGGAGGTAAATCCCAAACAAGTTCTTGAGTAAAATGAAGATTTCAATCCATTTGGAGATGAAAATTGAATTGGGAGTTTGTTTGTGTGGGTTAGGAGTATGTTCCAAGGCATGAAAGAGTAGCTTCAAAGCATAGCTGGGAGATTGAACAGTTAGGGTACCCTCCAAAATGTGACATCTCGAGATGAACAGCAGTTTGATAAGGGCTTTGACAGAGGGAAACAAAGAAGAAGAAGAAGAAGAAGAAGCAAATGACTGACATAAAAACCATGTTTTTAAGACTCTTTGTGTAAGCTGTCCCAATTTTTTGTTGTTCAAAAGTTTGGCAGCTAAAATGAAGGCTTCGCTTTGATCCAATTATTGTATCTAATATTTCTTTCTCTACGTTTCTCGAATTAGAGACGTTCAAATCACCTAAGAACTCGACTAATCTTAATTATCTAACTCAAACTATAAAAGTTGGGT TTCGTCTTAACCAATTAAGTTATGTTCGGGGTGTTGTCGTTATAAAACTTTGATGAGTTATGGGAGTTGGTATTGAGGTGTGTATGAGAAACAAAAGCAATAATGGAGGAGTTGGGGCTTCTGATGCATAGCAGAAAGTGCAATATATCTTTGTTGATCCAAAGCTCTGCTTATATGGGACGACAGTGATGCATGTAGCAAAAAGAAGCAGCAGCAGCTCAGATCACCCATCCCTTTGCTCAACACACCATGTCTCTTCCTACATCCCAACGACGTGGAAAAAAACATTAAACAAAACCAAACTTTGAACGCTCTTACAATCTTGCATGCATCTCTACTGTCTACCATGTTTTTTTCTTAATGTTTTATGATCAAACACTTTGAACCCTTTAGAATTTGGCCACTTTTTCTATCAATTAATCGAATTTAAGAACAACCCATTTCAATTTGAGATGCATATCATGTAAAGCCGACATCTTTTTGGTTATTGAGTCAAAAATAAAGGCAAAAGGAAGGGAAGAAAGTGGACCAATGAGAGAGAGAGAGGAATTAGCTGCGTCAATATGTTTGGTCCTGTGCTGTGCAGCGCAGCTATATATGTAACCACGCACATTCTTGTTCCTCCACCAACAGGTACCACACCACAACACTGAATCTGAGGCAATTTCCAACAATGGAGAGGGAAAATGAACCCAAATTACCCATTTTCAAGAGGATTTGTGTGTTCTGTGGCAGTAGCCCTGGTAAGAAGACTAGCTATAAAGATGCAGCCATTGCCCTTGCAAAAGAACTTGTTTCCAGGAATATTGATCTTGTTTATGGTGGAGGTAGCGTTGGATTGATGGGGTTGGTATCCCAAGCTGTTCATAACGGTGGCCGCCATGTTGTTGGAGTCATTCCCAAGACCCTGATGCCAAGAGAGATAACTGGAGAGACGGTGGGAGAAGTGCAGGCGGTGGCAGACATGCACCAAAGGAAGGCCGAGATGGCTAGGCGGTCTGATGCATTTATCGCCTTGCCTGGTGGGTATGGAACTTTAGAAGAGCTGCTTGAAGTAATCACCTGGGCCCAACTCGGCATTCATGATAAACCAGTAGGACTGTTGAATGTGGATGGATATTACAACTCCTTGCTGTCCTTCATAGATGAAGCTGTAGAGGAAGGTTTCATCAGTCCAAGTGCACGCCATATTATTGTATCTGCACCTAATGCAGAGGAGTTAGTGAAGAACATGGAGGAGTATGTTCCAAGGCATGAAAGAGTAGCTTCAAAGCATAGCTGGGAGATTGAACAGTTAGGGTACCCTCCAAAATGTGACATCTCGAGATGAACAGCAGTTTGATAAGGGCTTTGACAGAGGGAAACAAAGAAGAAGAAGAAGAAGAAGAAGCAAATGACTGACATAAAAACCATGTTTTTAAGACTCTTTGTGTAAGCTGTCCCAATTTTTTGTTGTTCAAAAGTTTGGCAGCTAAAATGAAGGCTTCGCTTTGATCCAATTATTGTATCTAATATTTCTTTCTCTACGTTTCTCGAATTAGAGACGTTCAAATCACCTAAGAACTCGACTAATCTTAATTATCTAACTCAAACTATAAAAGTTGGGT ATGGAGAGGGAAAATGAACCCAAATTACCCATTTTCAAGAGGATTTGTGTGTTCTGTGGCAGTAGCCCTGGTAAGAAGACTAGCTATAAAGATGCAGCCATTGCCCTTGCAAAAGAACTTGTTTCCAGGAATATTGATCTTGTTTATGGTGGAGGTAGCGTTGGATTGATGGGGTTGGTATCCCAAGCTGTTCATAACGGTGGCCGCCATGTTGTTGGAGTCATTCCCAAGACCCTGATGCCAAGAGAGATAACTGGAGAGACGGTGGGAGAAGTGCAGGCGGTGGCAGACATGCACCAAAGGAAGGCCGAGATGGCTAGGCGGTCTGATGCATTTATCGCCTTGCCTGGTGGGTATGGAACTTTAGAAGAGCTGCTTGAAGTAATCACCTGGGCCCAACTCGGCATTCATGATAAACCAGTAGGACTGTTGAATGTGGATGGATATTACAACTCCTTGCTGTCCTTCATAGATGAAGCTGTAGAGGAAGGTTTCATCAGTCCAAGTGCACGCCATATTATTGTATCTGCACCTAATGCAGAGGAGTTAGTGAAGAACATGGAGGAGTATGTTCCAAGGCATGAAAGAGTAGCTTCAAAGCATAGCTGGGAGATTGAACAGTTAGGGTACCCTCCAAAATGTGACATCTCGAGATGA MERENEPKLPIFKRICVFCGSSPGKKTSYKDAAIALAKELVSRNIDLVYGGGSVGLMGLVSQAVHNGGRHVVGVIPKTLMPREITGETVGEVQAVADMHQRKAEMARRSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDEAVEEGFISPSARHIIVSAPNAEELVKNMEEYVPRHERVASKHSWEIEQLGYPPKCDISR Homology
BLAST of Cp4.1LG16g05320 vs. ExPASy Swiss-Prot
Match: Q8RUN2 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana OX=3702 GN=LOG1 PE=1 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 1.4e-100 Identity = 178/207 (85.99%), Postives = 194/207 (93.72%), Query Frame = 0
BLAST of Cp4.1LG16g05320 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1) HSP 1 Score: 349.0 bits (894), Expect = 3.9e-95 Identity = 168/199 (84.42%), Postives = 187/199 (93.97%), Query Frame = 0
BLAST of Cp4.1LG16g05320 vs. ExPASy Swiss-Prot
Match: B9F166 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL2 PE=3 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 8.8e-95 Identity = 168/207 (81.16%), Postives = 186/207 (89.86%), Query Frame = 0
BLAST of Cp4.1LG16g05320 vs. ExPASy Swiss-Prot
Match: Q0JBP5 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL6 PE=2 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 2.8e-93 Identity = 166/205 (80.98%), Postives = 185/205 (90.24%), Query Frame = 0
BLAST of Cp4.1LG16g05320 vs. ExPASy Swiss-Prot
Match: Q9LFH3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1) HSP 1 Score: 338.6 bits (867), Expect = 5.3e-92 Identity = 166/199 (83.42%), Postives = 182/199 (91.46%), Query Frame = 0
BLAST of Cp4.1LG16g05320 vs. NCBI nr
Match: XP_022985551.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like [Cucurbita maxima] >XP_023513134.1 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 438 bits (1126), Expect = 5.86e-155 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g05320 vs. NCBI nr
Match: XP_022943600.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like [Cucurbita moschata]) HSP 1 Score: 436 bits (1122), Expect = 2.39e-154 Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g05320 vs. NCBI nr
Match: KAG7010636.1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 436 bits (1122), Expect = 7.59e-154 Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g05320 vs. NCBI nr
Match: KAG6570790.1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 436 bits (1122), Expect = 1.01e-153 Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g05320 vs. NCBI nr
Match: XP_038902690.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 [Benincasa hispida]) HSP 1 Score: 424 bits (1090), Expect = 1.81e-149 Identity = 210/218 (96.33%), Postives = 214/218 (98.17%), Query Frame = 0
BLAST of Cp4.1LG16g05320 vs. ExPASy TrEMBL
Match: A0A6J1J8J0 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111483589 PE=3 SV=1) HSP 1 Score: 438 bits (1126), Expect = 2.84e-155 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g05320 vs. ExPASy TrEMBL
Match: A0A6J1FY06 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111448320 PE=3 SV=1) HSP 1 Score: 436 bits (1122), Expect = 1.16e-154 Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g05320 vs. ExPASy TrEMBL
Match: A0A0A0KAT1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 GN=Csa_6G141420 PE=3 SV=1) HSP 1 Score: 420 bits (1080), Expect = 2.93e-148 Identity = 208/218 (95.41%), Postives = 213/218 (97.71%), Query Frame = 0
BLAST of Cp4.1LG16g05320 vs. ExPASy TrEMBL
Match: A0A1S3CKD9 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo OX=3656 GN=LOC103501957 PE=3 SV=1) HSP 1 Score: 420 bits (1080), Expect = 2.93e-148 Identity = 208/218 (95.41%), Postives = 213/218 (97.71%), Query Frame = 0
BLAST of Cp4.1LG16g05320 vs. ExPASy TrEMBL
Match: A0A5D3CV75 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00090 PE=3 SV=1) HSP 1 Score: 417 bits (1071), Expect = 6.42e-147 Identity = 206/215 (95.81%), Postives = 211/215 (98.14%), Query Frame = 0
BLAST of Cp4.1LG16g05320 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 367.1 bits (941), Expect = 9.9e-102 Identity = 178/207 (85.99%), Postives = 194/207 (93.72%), Query Frame = 0
BLAST of Cp4.1LG16g05320 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein ) HSP 1 Score: 349.0 bits (894), Expect = 2.8e-96 Identity = 168/199 (84.42%), Postives = 187/199 (93.97%), Query Frame = 0
BLAST of Cp4.1LG16g05320 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 338.6 bits (867), Expect = 3.8e-93 Identity = 166/199 (83.42%), Postives = 182/199 (91.46%), Query Frame = 0
BLAST of Cp4.1LG16g05320 vs. TAIR 10
Match: AT2G37210.2 (lysine decarboxylase family protein ) HSP 1 Score: 333.2 bits (853), Expect = 1.6e-91 Identity = 167/223 (74.89%), Postives = 186/223 (83.41%), Query Frame = 0
BLAST of Cp4.1LG16g05320 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 329.3 bits (843), Expect = 2.3e-90 Identity = 161/207 (77.78%), Postives = 184/207 (88.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|