Cp4.1LG16g04940 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG16g04940
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionSWIM-type domain-containing protein
LocationCp4.1LG16: 5938260 .. 5946372 (-)
RNA-Seq ExpressionCp4.1LG16g04940
SyntenyCp4.1LG16g04940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATATGTAGTTTGATTTTATTTTGGATGTTTAAGTCTCCAAAGCTTCTACCATTGATTGGTGTTAGTAATATAGTTTTCTGAGGATTATGCACTGTATTTGAATGTCGTATGGAGCTTGCAGCCTCTCTTTACACTGTAATTTCCACTAGAAGAGTAGTGCCAGGTTCATGAATTCTGATATTTAATCTTACTGAGAGGGATTTTTCTGATGATCTCTACTCATCTGTTAGGAACATGTTCTCCATCTTTTGGTTGTCCCATCGAATTAGGATGATTCCGTTTGTTGGGACTTGTTCTGTTGTATGCCTGGTATTATTTCTTTGCTTTTCTTTTAATAAATGCACGATTTGTTAGTTTTTTTTTTTAAGCTTTTGGTTGTCCCATTGATCAGAGACTAGCAAGTCATGGTTCTCAGTTAGAGGGGTGATAAACTTGAACGTCGAAATCCTCAGGCTCCGGTTTTCCTGGAACTCGATATAATTCCCTGAACACGCTGTTTCCCTCATCCTTTTGAGAGCTAGTTTTTGTCCCCAAATAAGACTCCGCCAAAAGTAGGATGGGTCATTTCTTAATTTTCGACTGATGGATTTGGGTAATATCTTGTGGAAGTAGTTTGGATGCCAAGAGGTGTGGGTTGGTCTCCACACCAACTTCGCAAGTTAGGCTTTGTTGAATCATTCCATACCCCTGAATTTGAAATCTCCTTTTCCCACTCTATCCAATGCATTTTTCCTAGATTGTTCCCAGGATTCCCTCCAAAATATTGTAAAGGCCTCCGTTAATTCAGAACAGAATTGACTTGGCAGCTTGAAACAATTCAAGAGTTTCGCTTTCCAACTTTGGATAGATTTCCATATCCTTTCCTTTATATATTCAAGGTTTTCTCATTCTTTCTTTGAGTGAGGAACTGAAAACCCCAAATACTTATCAAGGTGAGTCTTTAGCTTTACCCCAAACAGCCTTTGGAGGCTGGTCTTTATATCGTCATTAACATTTGGCAACACGAATAATGCATACTATGTAAGGTTCACGCTCTTTAAGGATTGAGATAATGGCAAAACTTTCAGGTGTTGAGATCTTGAAGGAAAATAGACTATCGTCCGCACAAGAAAAAGGCGAGAGATGGGGAGGCCAGTCTAGACATATAAATTCTGCTAATGGTTCTCCTGATTGTAGCTTCTTGTAGCATCAATGACAAATCCTCAAAACATAACAGGAAAAGTTAGGGTGATAGAGAGTCACCTTGTTGGATTTCTTTGTTTGGATATATACATCCCTTTGCTTTTCTATATATAAGGATTGAGCCTTTTACTAATGAGATGCAATCCATTATTCTACCCAACAATACATATATCCCATTCTTCTCATTATTGCTTCTAAACTACATAAAATTGCAAAGAAACTTAGTCATTGGCAAAAGAAAGCACAAATGCTCCTTTTACTACATTTTCCAAGTCTATCTTACAAAGATAACATACATGGCTTTATATAGCCTCCAAAATAAAACCCTTGACTTTTCATTAGGCATTTCAAGAGTTGTAACATTCATACTTTTATGGCCATAATTAACCACTATGTAATTGTAATAAATAAAAAGTCCTAAAATGCATTAATGAAACATCATAACTCTAAATTATGATCCACCCAAAATTTATAACCATAAAACTTGATTCTTCTTCAATTTGGCATGAATTGAAACATCTTTTAATAATTTTGACAACATTTTCTTCACATTTTCATTGAAGTATATTGTATGATTGATGTCTCTTGGTTCATATTATCTGGTCGAATCAAATTAGTTGGGTACATATAAGGGAGGCTTGTTTTCCATTCATTTCCTCATTCAGTCTCAACTTCATATGCCCCATTACTTGCTCAATGTCATATGCAAAAGGGAAAGAGGATTTAAAAGTAGATTGGAAATGTTGGATGATAGTGCCTTCAATGCCAACATCATCCTCTTTACCAAGTGCTTGTCTCATCATAGATTGTTGTTATCTCATTTTTCTTTTGTTGCATGTTAGCTTTAGTATGAAATCATTTTGTTCCTTCTTGTCTCCCCAACATAACCAAGTCGCATATTCTGTTCCCCGCCATTTTTTATCTTTGATTTTGCTGTGGGAAATATGATTCTACGCTTCCTATCTTTCACAATACAAATTGGGAATTCTATCAACCATAGTTTTTTTTGTCAGATTCTGATCTTAATTACGATACTCATTGACAAATTCCCACCTTTTTGTGGCATTAGAATTGTGTTTGCTGTTAAGGAATTTTGGGTATTTATCCTCTTTTCTTCTTCCAAATACTTGCTACATTTTTTTAGTCCAAGTTCTTGTTTGTTGCTACATTTTGTGTAAAGAGCGTTGCCTAATTTTATTCCATCTTTGCCTGTTTGCTTGGTTGAGTTGCTTATGGGAAAATCATTGCCCACGTTGTTTCCATGTAGGTGTTGCCTGCTGTTTTGGCTGATGATCATTTTCGTTGTTAGCGAAAGCTTACATAGGCAAGAAAATTGTCGCACATTTACTTTGGCAACCAAGAAAATCTGAAGGTAAGACCCAAACTGTTTATTCTACCGTTCTCCTTAACTCTATTCCCCTGTTTCTCTGATTGAGGATAGTGGCTTGGCTGTCTTGTTGAAGTTGCCACCTTCAAGTGTCCATGCCTTGTAATACGAGGCCTTGTTTTACCTAATTCTATTCCCCCGTTTCTCTAGTTGTGGATAGTGGGTTGGTGGTGTTCTTAAAGTTGCCGCAACCTTTTGGTGTCCATGCCTTGTAATACGAGATCTGTCATAAAGTTTGTATTTGCTTTGGTCTCCAAAGGAGGACCCCCCCGGTGTGTCACTTTTCTCTTTAATATGTAGATAAACAAAATAATATTACTATGTTAATATTTTGTCCCGCTATGATGGGTGTACTTATTTTTTCGTTCTTCCTTTCTTTCACCCATCAAATTTATTTGATATTTTACTATATTAGGTATCAAGAAACTTGTAGAAGAATATTTTAATATTAGATAGACGTGACCCAAATTCAAACTTACAGACCTATAGGACATCTGGTGTATGATTTGCTCCTTTGCTAGATTAGGTTTTTATCAATTAATAAGTGCTTCATATGATAGACCCCAAGTCACCACATTGCATACACATAAGAGAAAAATGAAGGTAGGGGAACCGAGGGATACAGTAGTTGAGGAATGAGGAATATGATTATGCAATTTGGTGGGCTGCATGTGGTGATTCTGCGAGACCCATTTGATTTGATTAGTTAGATGTCTTGTTCGAAAGTCGTTAGAGAGGCCCTATAAGGTCATTTATGTCAGAGCGAAGGTTTTCCTTTTGCGTTTGGCTGAATTGTAGCTCTTGTTGAGCATTATGGAAAGGGGGACTGTCAAAAATAGTCAGTACGTAATTCGAGCTCTACCACATTACTTCTCATTTCTATACTTGTATATCACTTGAACTTATGTTATTCAGTAAGTGGAATGTTGATATGAAATAACAGAGAGTAAATGATGCTGAAGTGATTTGTGTTTACCTTCTGTGCTAATACTACGTAAGTCACTTAGACCAAAAATTTGATTGGTGAAGTTGAAGGAATCCCAGTATGCTTTCAAAAGTTAGAAGCAATGAACTTCTCCACAAGACAGAATATAGCATTTTAGATTATGAAAGGTAGTATACTTGATGTTTGATGAGTCGTTTTGTTTTAGAAAATTCGAGCTTTGATAACCTTGGATAGGCAAGACAAGTCATGAGTTTGAATTTTATTTAGTGTAGTTCGTTGACACGATTAATGTTTTCTTTTTCCTCCTCTATTGAAAAAATCCATCCTTAAGTTGAAGTTTATGTAATGGCATAGTAGGTCATGGCTGAGAAGAAAATTATAGCTATTTGTCAATCAGGCGGTGAATTTGAGACTGGTAGAGATGGCATGCTTTTATACCATGGAGGAGATGCCCATGCTATTGATGTGGATGATAAAATGAAGTTTAATGAGTTCAAGGTGGAAGTAGCCGAAATGTTTAATTGTGATATGGACACTATGTCGATCAAATACTTTCTCCCTGGCAACAGGAAGACTCTCATTTCACTCTCCAATGACAAGGATCTAAAGCGCATGTTAAAGTTTCATGGAGATTCTGCCACTGTTGATATTTTTGTAATCATGGAAGAAGTTATGGCTCCCAACATCTCAAATTTGCCTGCCAGTAGGTAGTCTACTTGATGTCTGAGCTTTTTATTTTTAATGTTTGTTTTTTTGTTTGTTTTTCTGTTTGTTTTTCATTTTCTAATAATTAAAGTGTTGAGACTGTTTCAGCTTCGGGAGTTTGTGCTAAGCATAAAACTATTGTCATTTTGTATTTCCTAGGTCAAGTAGAACGACTTTGTCAGAAACAGTGGTACCGGTTGATGGTACCCCATTGGCTGTCGTCCATGGTATTGGGGATGATAATACCGAGTCTGATATCCCGCTTGATGGTGCACTGGATGTTGTGGATGACACAAACCCTTTAGTTACCCACATTGATATAGCAGGTGACATCACACCAATTCTTCCTCTTCTTGGTTCAAGTGATGACAAGAATGGCAAAGGTGCACAGCAGTGGCAGAATACCATTACTGGGGTGGGTCAACGATTTAGCAGTGTTCATGAGTTTCGGGAATCACTTCGTAAATATGCCATTGCACATCAATTTGCATTCAGGTACAAGAAAAATGATAGTCATCGGGTGACTGTTAAATGCAAGGCTGAATGTTGCCCTTGGCGGATTCATGCATCGAGATTATCAACCACTCCATTAATATGTATTAAGAAGATGAATTCCACACATACTTGTGAAGGAGCAGTTGCGACTACAGGTCACCAGGCTACAAGGAGTTGGGTGGCAAGTATTGTTAGGGAGAAGTTAAAAGTTTTCCCAAATTACAAACCAAAAGATATTGTTCATGACATCAAACAGGAATATGGAATACAATTAAACTACTTTCAGGCCTGGCGTGGGAAAGAAATAGCAAAGGAGCAGCTTCAGGGCTCATATAAAGAAGCATATAATCAGTTACCTTTTTTATGTGAAAAAATAATGGATACGAATCCTGGTAGCCTTGCCACCTGCGACACTAAAGAAGACTCGAGCTTTCACCGTCTCTTTGTCTCGTTCCATGCTTCATTAGGTGGTTTCCAACAGGGTTGCCGTCCTCTTATTTTCCTCGACAGCATTCCTTTAAAGTCAAAATATCAAGGAACATTATTGGCTGCAACAGCTGCAGATGGAGATGATGGTTTTTTTCCTGTTGCTTTTTCCGTAGTAGATACAGAAAGTGATGATAACTGGGGCTGGTTTCTTTTACAATTGAAATCAGCGTTGTCAACATCTTGTCCTATAACGTTCGTGGCAGATAGACAGAAAGGTTTAACTGTTTCAATTGCGAGTATATTCAAGGGCTCGTTTCATGGTTATTGCCTAAGGTACTTGACTGAACAACTTATAAGAGACTTGAAAGGACAATTTTCTCATGAGGTGAAGCGGCTCATAGTTGAGGACTTCTATGCTGCTGCTTATGCACCTAAACCGGAAAATTTTCAGAGGTGCGTTGAAAGCATTAAAAGCATATCACTAGAAGCTTACAATTGGATCCTACAAAGTGAACCCCAGAATTGGGCCAATGCATTCTTCGAGGGTGCTAGGTATAACCACATGACATCAAACTTCGGAGAGATGTTCTATAGTTGGGTATCAGAGGCACATGAATTGCCCATCACGCAGATGGTTGACGTGATTAGGGTTAAGATAATGGAATTGATCTATACACGGCGGGCAGATTCTGATCAATGGTTGACGCGGCTAACCCCATCCATGGAGGAAAAGTTGGAAAAGGATGGCCATAAGGCTCATACCCTTCAAGTGCTAATAATATCTGCGGGCAACACATTTGAAGTTCGGGGTGACTCAATTGAAGTTGTTGATGTTGACCACTGGGATTGTACGTGTAAGGGGTGGCAACTTACTGGATTGCCATGTAGTCATGCAATTGCAGTCCTTGAATGTCTTGCTCGTAGCCCTTATGATTTTTGCTCCAGATATTTCACAACTGAAAGCTACAGATTAACATATTCAGAGTCGGTGCATCCTGTTCCTCAAGTCGACTTGCCCATACAGAAAAGATCTCTACAGGCCTCAGTTACTGTAACTCCTCCTCCTACACGTCGTCCACCTGGTCGACCTACATCAAAACGATATGGATCCCCAGAGGTGATGAAACGTCAACTTCAATGCAGCAGATGCAAGGGGCTCGGGCACAACAAGTCAACCTGCAAAGAATTACTGCAGAGTGTTTGATATTGTAAGAACAACTTTCTTGTGTATACTTCAAACGTCTTTATTTACATAAAATAACGTTCATGATTGTATTTGGATTTAGGCATGAATGCATCAGTCAATAGCAATGTATGATTAGTTGAGGTGCATATAAGCTGAACCAAACACTCATGGATATAATAGCAATAATAATAATAATAATAACACATAGTATGTATGATTTCTACAACTAATAAACTATATACAATGGAGCCAAGACTCCCTTTCACGGTAGAATTGGTTTCTGCAGTCCTGTTTCTTGTATTTTCGTACTACTGTATGCATCCTGGACTTTACTTTTTCCTGGTCCAACTATGCATCACATTTAGATTCTTCATTTCATATAGACCAACTTGTAATCTGAACAACTTTCACTTTTAGGAGACAATAGACTTGTACCCGCATAAGTTTGAGTTAGGGTGGTTATGTCGGTTTTGTAAGTCGGGGCGTCTGTCAACCTGTTTATATGACTAACTGGATACAAGTCTTGTTTGATGTTTTTCTTAAATAGGATTGTGAAAGACAGAAGGACCAGAAGTTCCCATTGTATAAAGGACTACGTCGAAACATATACTTCTACCTCTACTTATTTGCTTCCGTTGACTGATATGTCGAACCAGTCACCCGATGTCGTAAATGGTAGTCTCTTTCTCTCTCTCTCTCTCTCACTCTCTCATTTAATGTTTCCTTTTTAGATGTTTTGCTAATTTTTGCTACAATGATAACAATAATTTTAGGAAGCCAATGAAAATAGTAGGTTGTTTGAATGGCCTCACTGAGTTGTAGACATGAAGCAAATATGTTGCATTTTACTCTCATCTGATCTCCAGTATTTGTACCTCTCTCCCCCCTTCCCTCTCCGCTCAGAAGAAGGAAGGGAGTTGGGAAATCCTTGTGTTCATCTATAATTGTCAAAGAATGGATGGCGGTTCCATTCTTTTCCTGCTTTAGAGGGAAAATTGTTTACACAAAAAGTTATTACTTTCGAAAGTCGTCCAAACTCGATCATATTTGTAGATATTGTTATGATAATGGCCTCCGAGTTGTTACGTTGCATATAGGTAGAGTTGTCAAATTTTCCCGCCATAGATGTTATAAACAAGTCAGTTGGGGAATTCTTTTTCCCTCTTTTTTACTTTTCGAAGTGTGATTTAGCATTTTTACTTTTCGAAGTGTGATTTAGCAAGATCTGTAATGTTAAATGACTTCGAGAGAAAAGTCGAAGTAATTGTGAATTTCTCTATACACCTCTAAAATGTCGACAACTGCTTATGTCTATCGACCAATGTTGTCGACCACCATCCACCTCCAACGATTGGGGATTGGTGCCTGTTAATCAGGACTGAAGCCAATGGATCGCTAAAGTGGTTGTTAGTCACCATTTGCCGGCCAATGGTTCTCATTCTCGGTCATTGACAACCAAGAACCAATAGCTTGTGACTGGAGACCAACAACCAACAACACCTTTGGCATCAACTGGTTCGAGGACTACCGATCGACAATCGACACACCCATTTCCGACTACACTGACCTCCACCCACAATCGACAACTAGAACCGAGGGCAGGTAACCAGCAATCAGCAAACAACGATCTCAATTGCTAATCACCGATCTTTGTTCTCTAATTCCTAGTCTCGATTGTTAGTATACTCATTGTCATCGTAATTACTAGAGCATTCTAAACACACTTGTATTTTTCCAATTATACTTTGTTCATATTGATTAAGATTAACATTGGATTGA

mRNA sequence

ATGAATATGTCAAGTAGAACGACTTTGTCAGAAACAGTGGTACCGGTTGATGGTACCCCATTGGCTGTCGTCCATGGTATTGGGGATGATAATACCGAGTCTGATATCCCGCTTGATGGTGCACTGGATGTTGTGGATGACACAAACCCTTTATGTGATTTAGCAAGATCTGTAATGTTAAATGACTTCGAGAGAAAAGTCGAATCACCATTTGCCGGCCAATGGTTCTCATTCTCGGTCATTGACAACCAAGAACCAATAGCTTGTGACTGGAGACCAACAACCAACAACACCTTTGGCATCAACTGGTTCGAGGACTACCGATCGACAATCGACACACCCATTTCCGACTACACTGACCTCCACCCACAATCGACAACTAGAACCGAGGGCAGATTAACATTGGATTGA

Coding sequence (CDS)

ATGAATATGTCAAGTAGAACGACTTTGTCAGAAACAGTGGTACCGGTTGATGGTACCCCATTGGCTGTCGTCCATGGTATTGGGGATGATAATACCGAGTCTGATATCCCGCTTGATGGTGCACTGGATGTTGTGGATGACACAAACCCTTTATGTGATTTAGCAAGATCTGTAATGTTAAATGACTTCGAGAGAAAAGTCGAATCACCATTTGCCGGCCAATGGTTCTCATTCTCGGTCATTGACAACCAAGAACCAATAGCTTGTGACTGGAGACCAACAACCAACAACACCTTTGGCATCAACTGGTTCGAGGACTACCGATCGACAATCGACACACCCATTTCCGACTACACTGACCTCCACCCACAATCGACAACTAGAACCGAGGGCAGATTAACATTGGATTGA

Protein sequence

MNMSSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPLCDLARSVMLNDFERKVESPFAGQWFSFSVIDNQEPIACDWRPTTNNTFGINWFEDYRSTIDTPISDYTDLHPQSTTRTEGRLTLD
Homology
[Close]
BLAST of Cp4.1LG16g04940 vs. NCBI nr
Match: XP_022986263.1 (uncharacterized protein LOC111484064 isoform X2 [Cucurbita maxima] >XP_022986264.1 uncharacterized protein LOC111484064 isoform X2 [Cucurbita maxima])

HSP 1 Score: 96.3 bits (238), Expect = 5.04e-20
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 4   SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL 51
           SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL
Sbjct: 78  SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL 125

[Close]
BLAST of Cp4.1LG16g04940 vs. NCBI nr
Match: XP_023512623.1 (uncharacterized protein LOC111777317 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023512624.1 uncharacterized protein LOC111777317 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 96.3 bits (238), Expect = 5.06e-20
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 4   SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL 51
           SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL
Sbjct: 95  SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL 142

[Close]
BLAST of Cp4.1LG16g04940 vs. NCBI nr
Match: XP_022944024.1 (uncharacterized protein LOC111448575 isoform X2 [Cucurbita moschata] >XP_022944025.1 uncharacterized protein LOC111448575 isoform X2 [Cucurbita moschata])

HSP 1 Score: 96.3 bits (238), Expect = 5.06e-20
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 4   SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL 51
           SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL
Sbjct: 95  SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL 142

[Close]
BLAST of Cp4.1LG16g04940 vs. NCBI nr
Match: XP_022986258.1 (uncharacterized protein LOC111484064 isoform X1 [Cucurbita maxima] >XP_022986259.1 uncharacterized protein LOC111484064 isoform X1 [Cucurbita maxima] >XP_022986260.1 uncharacterized protein LOC111484064 isoform X1 [Cucurbita maxima] >XP_022986261.1 uncharacterized protein LOC111484064 isoform X1 [Cucurbita maxima])

HSP 1 Score: 96.3 bits (238), Expect = 5.08e-20
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 4   SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL 51
           SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL
Sbjct: 117 SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL 164

[Close]
BLAST of Cp4.1LG16g04940 vs. NCBI nr
Match: XP_023512619.1 (uncharacterized protein LOC111777317 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512620.1 uncharacterized protein LOC111777317 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512621.1 uncharacterized protein LOC111777317 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512622.1 uncharacterized protein LOC111777317 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 96.3 bits (238), Expect = 5.08e-20
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 4   SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL 51
           SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL
Sbjct: 117 SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL 164

[Close]
BLAST of Cp4.1LG16g04940 vs. ExPASy TrEMBL
Match: A0A6J1JG11 (uncharacterized protein LOC111484064 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484064 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.44e-20
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 4   SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL 51
           SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL
Sbjct: 78  SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL 125

[Close]
BLAST of Cp4.1LG16g04940 vs. ExPASy TrEMBL
Match: A0A6J1FYF3 (uncharacterized protein LOC111448575 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448575 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.45e-20
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 4   SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL 51
           SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL
Sbjct: 95  SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL 142

[Close]
BLAST of Cp4.1LG16g04940 vs. ExPASy TrEMBL
Match: A0A6J1JG05 (uncharacterized protein LOC111484064 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484064 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.46e-20
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 4   SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL 51
           SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL
Sbjct: 117 SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL 164

[Close]
BLAST of Cp4.1LG16g04940 vs. ExPASy TrEMBL
Match: A0A6J1FXL4 (uncharacterized protein LOC111448575 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448575 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.46e-20
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 4   SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL 51
           SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL
Sbjct: 117 SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL 164

[Close]
BLAST of Cp4.1LG16g04940 vs. ExPASy TrEMBL
Match: A0A1S3C8X2 (uncharacterized protein LOC103497981 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497981 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 6.50e-18
Identity = 45/48 (93.75%), Postives = 45/48 (93.75%), Query Frame = 0 

Query: 4   SSRTTLSETVVPVDGTPLAVVHGIGDDNTESDIPLDGALDVVDDTNPL 51
           SSRTTLSETVVPVDGTPL VVHGI DDN ESDIPLDGALDVVDDTNPL
Sbjct: 95  SSRTTLSETVVPVDGTPLTVVHGIEDDNIESDIPLDGALDVVDDTNPL 142

The following BLAST results are available for this feature:
BLAST of Cp4.1LG16g04940 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG16g04940 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022986263.15.04e-20100.00uncharacterized protein LOC111484064 isoform X2 [Cucurbita maxima] >XP_022986264... [more]
XP_023512623.15.06e-20100.00uncharacterized protein LOC111777317 isoform X2 [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022944024.15.06e-20100.00uncharacterized protein LOC111448575 isoform X2 [Cucurbita moschata] >XP_0229440... [more]
XP_022986258.15.08e-20100.00uncharacterized protein LOC111484064 isoform X1 [Cucurbita maxima] >XP_022986259... [more]
XP_023512619.15.08e-20100.00uncharacterized protein LOC111777317 isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
BLAST of Cp4.1LG16g04940 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JG112.44e-20100.00uncharacterized protein LOC111484064 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1FYF32.45e-20100.00uncharacterized protein LOC111448575 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JG052.46e-20100.00uncharacterized protein LOC111484064 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1FXL42.46e-20100.00uncharacterized protein LOC111448575 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A1S3C8X26.50e-1893.75uncharacterized protein LOC103497981 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of Cp4.1LG16g04940 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..136

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG16g04940.1Cp4.1LG16g04940.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding