Cp4.1LG16g03310 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAATCCTCTCCCACTTTCCTCTCCTCCGATCGACTTCTCAGCTCATCGGAATTAGAATTCTCCGACATCGAAATGACCCCTCTTCAATCCTACACAAGCCTCAAGGACCTCCTGCCGGACACCCCCTCGCCGCCTCCCTCCGCCGCCTACCCTCTCCAATGCCCCGCCTGGGACGAACTCCCAATCAAAAACCCACTCGTCAAACACGCCGCCTTGGCCTACCTGCAGCCGATGCTCACCCCGCCAGCCGCCGGCGATCGTAGCTTTATGCGTAGACTCAAGAAGCACGGATTCGGATGCATCGAGTGGCTCGTCGCCGTCATCGGAGAACTCTCCGGTGGAGTCCGCCGGTGGTAA ATGGAAGAATCCTCTCCCACTTTCCTCTCCTCCGATCGACTTCTCAGCTCATCGGAATTAGAATTCTCCGACATCGAAATGACCCCTCTTCAATCCTACACAAGCCTCAAGGACCTCCTGCCGGACACCCCCTCGCCGCCTCCCTCCGCCGCCTACCCTCTCCAATGCCCCGCCTGGGACGAACTCCCAATCAAAAACCCACTCGTCAAACACGCCGCCTTGGCCTACCTGCAGCCGATGCTCACCCCGCCAGCCGCCGGCGATCGTAGCTTTATGCGTAGACTCAAGAAGCACGGATTCGGATGCATCGAGTGGCTCGTCGCCGTCATCGGAGAACTCTCCGGTGGAGTCCGCCGGTGGTAA ATGGAAGAATCCTCTCCCACTTTCCTCTCCTCCGATCGACTTCTCAGCTCATCGGAATTAGAATTCTCCGACATCGAAATGACCCCTCTTCAATCCTACACAAGCCTCAAGGACCTCCTGCCGGACACCCCCTCGCCGCCTCCCTCCGCCGCCTACCCTCTCCAATGCCCCGCCTGGGACGAACTCCCAATCAAAAACCCACTCGTCAAACACGCCGCCTTGGCCTACCTGCAGCCGATGCTCACCCCGCCAGCCGCCGGCGATCGTAGCTTTATGCGTAGACTCAAGAAGCACGGATTCGGATGCATCGAGTGGCTCGTCGCCGTCATCGGAGAACTCTCCGGTGGAGTCCGCCGGTGGTAA MEESSPTFLSSDRLLSSSELEFSDIEMTPLQSYTSLKDLLPDTPSPPPSAAYPLQCPAWDELPIKNPLVKHAALAYLQPMLTPPAAGDRSFMRRLKKHGFGCIEWLVAVIGELSGGVRRW Homology
BLAST of Cp4.1LG16g03310 vs. NCBI nr
Match: KAG6571006.1 (hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010836.1 hypothetical protein SDJN02_27632, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 243 bits (621), Expect = 3.61e-81 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g03310 vs. NCBI nr
Match: XP_015893260.1 (zinc-regulated protein 8-like [Ziziphus jujuba]) HSP 1 Score: 105 bits (261), Expect = 1.42e-25 Identity = 63/116 (54.31%), Postives = 72/116 (62.07%), Query Frame = 0
BLAST of Cp4.1LG16g03310 vs. NCBI nr
Match: XP_007199228.2 (uncharacterized protein LOC18768692 [Prunus persica] >ONH92342.1 hypothetical protein PRUPE_8G169400 [Prunus persica]) HSP 1 Score: 101 bits (252), Expect = 1.96e-24 Identity = 58/114 (50.88%), Postives = 73/114 (64.04%), Query Frame = 0
BLAST of Cp4.1LG16g03310 vs. NCBI nr
Match: XP_034228819.1 (uncharacterized protein LOC117637881 [Prunus dulcis] >VVA15725.1 PREDICTED: MTR_1g112960 [Prunus dulcis]) HSP 1 Score: 101 bits (251), Expect = 2.78e-24 Identity = 58/114 (50.88%), Postives = 73/114 (64.04%), Query Frame = 0
BLAST of Cp4.1LG16g03310 vs. NCBI nr
Match: XP_030523234.1 (uncharacterized protein LOC115735926 [Rhodamnia argentea]) HSP 1 Score: 100 bits (249), Expect = 4.39e-24 Identity = 57/109 (52.29%), Postives = 73/109 (66.97%), Query Frame = 0
BLAST of Cp4.1LG16g03310 vs. ExPASy TrEMBL
Match: A0A0A0LPR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271440 PE=4 SV=1) HSP 1 Score: 152 bits (383), Expect = 3.45e-45 Identity = 83/111 (74.77%), Postives = 91/111 (81.98%), Query Frame = 0
BLAST of Cp4.1LG16g03310 vs. ExPASy TrEMBL
Match: A0A6P4ADJ4 (zinc-regulated protein 8-like OS=Ziziphus jujuba OX=326968 GN=LOC107427391 PE=4 SV=1) HSP 1 Score: 105 bits (261), Expect = 6.86e-26 Identity = 63/116 (54.31%), Postives = 72/116 (62.07%), Query Frame = 0
BLAST of Cp4.1LG16g03310 vs. ExPASy TrEMBL
Match: M5VHF3 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa022032mg PE=4 SV=1) HSP 1 Score: 101 bits (252), Expect = 8.12e-25 Identity = 58/114 (50.88%), Postives = 73/114 (64.04%), Query Frame = 0
BLAST of Cp4.1LG16g03310 vs. ExPASy TrEMBL
Match: A0A251MZ17 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G169400 PE=4 SV=1) HSP 1 Score: 101 bits (252), Expect = 9.51e-25 Identity = 58/114 (50.88%), Postives = 73/114 (64.04%), Query Frame = 0
BLAST of Cp4.1LG16g03310 vs. ExPASy TrEMBL
Match: A0A5E4EIX6 (PREDICTED: MTR_1g112960 OS=Prunus dulcis OX=3755 GN=ALMOND_2B029195 PE=4 SV=1) HSP 1 Score: 101 bits (251), Expect = 1.35e-24 Identity = 58/114 (50.88%), Postives = 73/114 (64.04%), Query Frame = 0
BLAST of Cp4.1LG16g03310 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 4.8e-05 Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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