Cp4.1LG16g03020 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g03020
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Actin-depolymerizing factor 5
Location	Cp4.1LG16: 4987625 .. 4996495 (+)
RNA-Seq Expression	Cp4.1LG16g03020
Synteny	Cp4.1LG16g03020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGGTAAAAGTGGGAGCCAGACAAAATGAATTGGCACGATGATGCAGACAAGGTTCGTGTCTTGGCATTACCTTCATCAACCACGAGCCTACACGCTCTTGATCCTATCTCCTCCATCTGCACCCTCCTCCTTCAACGGAGCTTCACCGCCGCCGCCGAAACCGCCGCCACTTTCACCTCTAACCCAAAGCTCCTTATTCACCCGTTTTCATTCCCACTGTAAACCAGACCAGAGCTTCACCCACCATTGTCGAACCATGAGCTCTAATCCCTTTCAATCTCACACCCTTCTCCTTCTTCTCTAGTTCAATTCCCCTCTCCCATGGCCGCCATTGAAGAACCCACCAAGCCCACTTCCCTCTACGACTCCCCATCGGCGTCTCAACCCCTCCTCTCCAATCCCCCTGAATCCGACTCATCTCAGTATCTTCAGATCTCCTACAACCATGGCGACAGACCGTTCAAGGACATCCCCATCCTTGTTCTTTTCCTTCTCTTCGTTTTATCCTCATTTGGGTTTGGGATTTTCGCCACTTTTAATCGAAACCCCAATTACCCAAATCTCTCTTCTTATCACTATGATTTCAAAACCTCCAATTGTGTTACGGATTCCCCCAATTGGGTTCCTCTGTACTCCTCTTCTTCCTCTGTTTTGAAATCCTTGATTTGGGCCCTTGTAGCTACTTCGATTTTAAGCTTACCCATTTGCTTTCTTTTACTTCTCTTGCTTAAGCACTACACGAGACAGATTGTGTACGCCTTACTTCCTTTCTTCGTCGTTGTTCCTATCTTCATCAATGTCTATTGGTTCGTCGCCTGTACGATTAACCCCACTTGTAATAACGACTTCCCCATGGTGTATAGGATTTTAGTTCTCATCTTCATATTCTTGGTGATTGGTGTAATCGTGTGGATATTCATCGTTAATTGGCACCGAATTGAGCTCACGATTAAGATAATTGGGGTTGCCGCGGATGCACTGTCAATGAATCTGGGTCTGTTTGTGGTTATACCGAGTATGACTCTGGGGTTACTGGTTTATTATGCGCCAATTGTTCTGTTCTTGGTGTTTGCGAGGTTGAATGGGAAGATTGTGCCCGATCACCATGGATCGAGTGGAGAGTATGCTTGTGTTTGGAAGGAAGACAAGTGGGTACCTGCTTATTATGCATTGGCGATTCTTACGATGTTGTGGTCTGCTGCTGTAATGGTGGAAGGGCAAGTTTATGTGATTAGTGGTACCATATCGCAGTGGTATTTCTCGAATGAAGAGGATGACACTCCAAGACGGAGTATTAGGAAGTCTTTAAGGTTAGTATCTACTCATTTTTGTTCTGTTGAACAGATTCATGGCTTTCTTGTTTTGAATTTATTTGGTGTTCTTGATCTTTATCATTCTCTTCCAACACTGCATGATCTCATTGGCAATAATCTTAACATACTCTTTAGTGATGTTCTGAGCCTTGTTGATGAATTCAGTAGTGAAATAATCTAGATCCAGTGACTTGTTCTCCCCATACCCATTATTGCTGTCAAAACCTCCTCAATGAAAGGGTCATCCAACATTGTGTTGCTTTTCTCTACCGATCCAACCCTCTCCGGGTAAGAACCCCTTTGTAACAGCCCAAGCCCACCGCTAGCAGATATTATCCTCGCCGTCAGCCTCATGATTTTAAAACACGTCTACTATAGAGATGTTTCCACACCCTTATAAGAAATGTTTCATTCCCTTCTCCAACCAATGTGAGATCTCACGACTTTCACACCGCCCGGTGTCTGGCTCTGATACCATTCGTTATAGCCCAAGCTCACTGCTAGTAGATATTGTTAGGTATCGTCGTTAGTCTCACGGCTTTCACATACCCTTTAAGCAATACTTTGTTTCCCTCTCCAATCAATATGGGATCTCACACTCTTTACCCTAAGCTTTAGTGTTGAGATGAACAAAGAAGATGAGAAACTTTGGTTCGACATCCTTTTTAGGAATCTGCTCCCTTTTGATTTTAAGATTACTCGAATGAACCAGGGGGTAGACTATTGTTCAAATTAGTAGGGAAGCCAAGGTTTTGGGGTACCTAGACCAAATGTTGGAGCAGAACACACCCCTGTAGGCTTGTGTGAAAAGAAAGAGAAGCTGGAGGAGAAGACTAAGATTGATATCAAAGAGGAGACGAGGTCTTTGTTCAATGAAGATAAGAAGAAAGGAGTTGAGAAGAATCCATATTACAACAAATTCATTTGAGTCGGTTTTTGTGGCTAATGGGGAGACATGTTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAACATTCCTTACAAGGGTGTGGAAACCTCTCCCTAGCAAACGCGTTTTAAAACCGTGAGGCTGACGACGATATGTAACGGGCCAAAACGGACAATATTCGTTAGCGGTGGGCTTGAGCTTGGGCTGTTACAATCGTTACTTTTGTTCCTGTACTCTTAACTTTCTGTCATTGCCTTTCTTCTTAGTTTGATTGTGTTAGTTAGCTGATTGACCAGCCTTTTCTTTTTCTAAATGAGAATTGAAACAATGTATGTTAGACAGCGTTGGGATCAGTTATGATCATTGATTCTTATGCTGGCCATTGCTCATTTGCAGGAATGCATTTGGCCCCTCTGCTGGCACTATATGTTTATCTGGCTTACTAATTCTTGTGGTGCGTGTTGTTCGTGCTGTGGTCGATAGTGCAAGACAAGAAGATATTCCCGGGATGTTCAACCTTATTTTACGTTGCTGCGTAAATACGTTTCTGGCAGCTGTTGATTATCTGAACAAATTTGCAATAACTTTTGCAGCAATAACTGGTGAAGCTTACTGTTCATCTGCAAAAATGACATATGAACTCTTGAAACGAAATCTCCTTTCAACTGTTTTTGTCGAGACAATCTCCACACGTTTGTTAGCTGGAATCGCCTTTGTCGTCTCAGCCATATATGCAATTGTGGTACGTAAACGAAAAAGGGCTGTGTTTATGTTTAGCTATGTACAAGTCAAGATTTTTCTTCCCCCGTAGTTTTATGCTGCAGAAGCTTACAAAGGCCAACTTTTTTTTTCTTTTTCGGTCTACCTCGAACAATATCCTCGTTGAATTTTGCCCTTTAGTTATGTGAGATCCCACCTCGGTTGAGGAGGGGAACGGAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTAAGAGGAAGCCCAAATAGGACAATATTTGCTAGCGGTGGGCTTGGGCTGTTATGAATGGTATCAGAGCCAGACACCGGGTGGTGTGCTAGTGAGGACGTTGGGTCCTGAAGGGGGTGGACTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAACATTCTTTATAAAGGTGTGAAAACCTCTCCCTTGAGGGAAAGCCCGAAAGGGAAAGTCCAAAGAGGACAATATCTGTTAGTGGTGGGTTTATTTAAATAATACGAAGGCTAGTACCCTTCGTGAAGTGATTGGTTTCCCTCCAGGGAAAGCCCAAAGAGGACAATATCTACTAGGGGTGGGTTTGAGCTATTACAAGTTCTCTCTCTTATATTCCCTTCATATTGTTGTATATTTGCAGGCTTGTGCCATCTTACAGGCCGTGAGCCATCTTGGTGTTAAAACATACCTTGTCGCCATTGCAGCATGGCTTCTCCTGATCGTGGTACTCGCATTCTTTATCCATGTACTGGATAATGTAATCGAAACCGTGTACGTATGCTATGCTATTGACAGGGACAGAGGTGCAGTATGCAAACAAGATGTCCATGAGGTTTATGTTCACCTACCCATTAGCAGGAATCACAGATCATCTCTGGTAACTTCTTCACTCCTTGTATAATAAATTGTACTGCAATTCACATAGTATGATGGTTCTACAGATGACTGTGTTTGAGTATGCTATTCTGTGTATAATGAGTTGTCACCCTGTACATTTTGAGCCTTTCCCCCCACCTTTATGGTGGGTCTTTAGTGGACAAGATTCCCAATTTAGTTCATGAAAATAGAATAAAAAGCTTTAGGTCTTGTTGTTTTATCCTGTGATGATCACTTGTAACTGATGGCGGAGCCCTTGTGCACTGTTCATGTTTATACAGAACATTTGTTATGGTTAGGATCAGGCAATGATGATCAAAAGATTGGAGCTGTTAAAACTTGAATAAACTGAGCTGACTGATAAGAACATTCAAAGTATTTGTTAATCTGTAACGACCCAGATCCATCGCTAGCAGATATTGTCTTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAATGTGTCTGCTAGGGGAAGGTTTCCGCACCCTTATAAATGGTGTTTTGTTCTCCTCCCCAACCAATGTAGGACATCACATAGTCGTACACCTCTATAGGCACTGTTTTAATTTTGAGAATACTAGGAATAGGTATGGAGTTTGCTTAAAGATGAAATGAATTAGTGATTTTGTGTAACAGTTTAAGCCCACTGCTAGTAGATATTGTTTGTTTTGGCTTGTTATATATCACCGTCAGTCTCACGGTTTTAAAATGCGTCTACTAGGGAGAGGTTTTCATACTCTTGTAAGGAATTATTCGTTCCCCTCTCCAACGGATTTGAGATCTTATAATCCACCTCATTTCGGGACCCAGTGTCCTTGTTGGCACATCGTCCAGTGTCTGGCTCTGATACCATTTGTAACAGCCCAAGCCCACTACGGGTAGATATTGTCTGCTTTGGCCTGTTATGTATTGTCGTTAGTCTCATAGTTTTAAAATTCATCTACTAGAGAAAGGTTTCCGCACCCTTACATGGAATGTTTCGTTCCCCTTACCAACCATTGTGAGATCTTACAATTCACCCCTCTTGGGGACCTAGCGTACTCGTTGGCACACCGCCCTGTGTCTGGCTTAAGATCATTTGTAACAGCTTAAGCCCACAGTTAATAGATATTATCTGTTTTAGCCCGTTACATTATCGTCGTGAGCCTCACAGTTTTAAAATGCGTCTACTAGGAGAGATCTCCCCACCCTTATAAAAAATGTTTCATTTCACTCTTCAACTGATGTGGGACCTCACAATCCACCCACCCCCTTTAGAGACCTAGTGTCATCGTTGGCACACCACTCGGTGTCTGACTCTAATACCATTTGTAACCGTCTAAGTTTACCGCAAGCAAATACGGTATGTTTTGGTCCGTTGCATATCGCCATCAGCCTCATGATTTTAAAATGCGTCTACTAGTAAGAGATTTTCGCACCCTTATAAAGAATGTTTTGTTTCCCTCTTCAACCGATGTAAGATCTCACAATCCACCTCCCTTAGGGACCCAGCGTCCTCGCTGGCACACACTCGGTGTTTGGCACCTATTAAGGAGATGTTTCTACATCGTTATAAGGAATGCTTCGTTTCCCTCTCTAACCGATGCGAAATCTCACATTTCTCAACTACTACAACGCCATTGAGAAACACGAGAAAGAAATTAGAGTAACTCCATTAGAAAGAAGCCATAAACTAATGCCCAAGATTTGTTGTGTTGAGGACACAGCTAGCAGATAAACATCAGAACCTTCTTCCATCTCCATCATCAGTCTCTCTCAGCTTCATTATTTGCCCCACCCCTCTCCTTTCTCTCTTTTCTTCCACTTTTTATTGGACTCTTCTCTTTGTACTCTTATCTCCAAATTGGACGGTCTATTTCATGATAGTATGATATTGTTCATTAGTTCGGTCGGTATGATATTGTTCATTAGTTCGGTCGGTATGATATTGTTCATTAGTTCGGTCTGTATTTGCATGACTTTGTTTTTTTTGTTTCGCTCATCTGACTTGGTACAAATAGAAACATTTGACAGTCTCTCGTACGTTACATGTAGTACACTATGTTCATGTCTCAAACAACCCTCTCTTAAAACAAAGAATTATCCATTTTTGGACACTTAAGGACATTTTTCTTCCAAGTACACCGTCTCGTCTCCTAATATGAGCTAACTCCAGACCCAACTTCACTAGTAATCGTCGATCAACCATATGATGGTGAATTCATTTCCAAGCCTTGTACACACCGCTCGTCATACCATAGAAGTTGGTCATGCCCGAACTCATTACCTTAATTTCAAGGAGAGGAATGTCGAAAAAGTCAAAAGCTTGAGATTACAAAAACGACCTTTCATGTCGAGTCGTAGATAAATTAAGAGTTACTGAAAGTAGAATGGTTAAGGGAAACATCCCCACACAAAGGAATGATGCCATGATATTGTTCCACTGTGTTCCTCCAGACAAATCCATGGAAAACCTCAAAACACCTTTTTAGAACCAAGAACAAAGGACTGAAAAATTTGTGATCATTACATAAATTTTTTTGGCTCCTTTGCTTCAACGCAAAGACTTGTGTATAGAGAAACACGAAGAAAGAGATATGGAGGATATGGTCGTGTGATCCCTTACCATAACGCCATAAAATATGTATTAAGGGTATTCGAAGAACTCGATGATCCAAAAACTCGATCAACCCAAAATTAATTTGATTCATGAATTTCCCTGAAACTAGATTGAGCTTAATCGAAATAACTTGTATTTAGAAAGCAATTTTTTCAAATATATCGACAGTAACTCTTAATTAAATGTTTGAAAATAAATAAATGTGTGTTTTGCCTACTAATATTTTACTTTTAATTAAAAAAAATGAATAAATGACCTGAATCAATCTAATCCAAAAATTTTATAATTGAGTTGGATCGGGACAAAAATTTGAATAAATGACTCCGAATCAACGGAACCCAAAAATTTAATTGTTGGGTTGTATTCATTATTGAACAAGAGTTGTTTGGTTTGAAAAAATGACAGGTTGAACAATTGAGTCGGGCTTAAAAAAATGTTCCAACTCGTCTCGACCCATTTCATATGTACTCTGTTTAATGGTAGAGTAGGCTTTTTAAAATTTTTTTTTTTTATTGAATTTTTAGTACAATAATAGCTTTTAAACATGTCCCCCCTAATATGTGACATAATTCACTAAACCATAAATCACTATAGTACTCATTTTAATATATTATCAAATTATTAACTTATAATAATCTAAAATATTATATATATATATTCCATTTTTTTATTTAAATAATATAATAATCTATTGAAAGAAAATTCCATAATTATTAAGATTTAATCCAACAATGATAAAATATTTTTATCTTATTTCGGATATTATTAATAATTAGTTTAAATTCGATTTTATTTTAAATTTTTAAATTTGATCTATTTTATACAAGATTTGATGATGGTTAAAAGCGTAATTATGTGCAATTGATAGGGGTATTTTGGTAAGGCGATCTTTATATAAAGCCCCAACTCGGTTCACTCTCACTCGCGGTAGTCAATTTTCAGAGTTCCGAGAGTGTTCACAGACCAGTTCCCGACGAGACCTAACAATGGCGATGGCTTTCAAGATGGTAATGATTTATACACTTCACGGTTATAATCTCTTCTGTATATATATCTTTTTTCAATTTTTTATGAAATTATGATTCTGATTTGATTTGTTAACCACGAATCTCAGGCAACCACTGGAATGTGGGTGAGCGATGAGTGCAAGAACTCGTTTATGGAGATGAAATGGAAGAAGGTGCATAGGTATATTGTGTTTAAGATCGATGAAGGATCGAGGTTAGTCACCGTTGACAAGGTCGGTGGTTCGGCCGAAAGCTACGATGATCTAACTGCATCATTGCCGAATGACGACTGTCGATACGCAGTGTTCGATTTCGACTTCGTCACCGTTGATAATTGCCGGAAGAGCAAGATCTTCTTCATCGCGTGGTATGTTGCGCGATTATTTTCTGTTTTTCGTCGATTGCATCCGTCCTCATTCATCTAACCTCTATTTCCGTAGAATCGTTCAATTCTCTCCGATAACTTGAATAGCTATGTGGAAATCCTGATGAATTCGACTCAAAATTTCCTCGAATTCGTAATCTCTAGTATGTTGCGCGATTATTTTCTGTTTTTCGTCGATTGCATCCGTCCTTCATTCATCTAACCTCTGTTTCCGTAGAATCGTTCAATTCTCTCTGATTACTTGAATAGCTACACGAAGCTTCTCTCTATGCGGAAATCCTGATGAATTCGACTCAAAATTTCCTCGAATTCATAATCTCTAGTCCTGTTACGGTATCTAATTAATTAGGTATTGAGAGCAGCAGCATAATCGCACTACTGATCGTAAAATCGGAATTCTAATTCATTATTTGATTATTCCTTTTTCTCTTCAAAGAATTTGACATCGAGTATAGTAATTGATTTTAAAATAGAATGGATCTGAATCTGAAACTCAAACTGAAACCGATCGATTGGTTTGATATGGTACAGGTCGCCCACCGCATCAAGAATTAGAGCAAAAATTCTATACGCAACTTCGAAAGCCGGGCTGAGGAGAGTGCTGGAAGGCATTCATTACGAGCTTCAAGCAACCGATCCAACTGAAATGGGGATGGATGTGATCAAGGACAGAGCCAAATAGATCAAAAAAAAAAAAAAAAAAAAAANCTTTGAGTTTCTAATAATGAATCACCACTCCAACCACATCCATTATCTGCTTTTCATTCTTTGTTTGTTCACTTTTTTGCCTTTTTCTTTGTGTTTTTTAGATTTTGAGCTCTAATGTAATTAAAAGTAAGATGAAAGAAAATTATCTTCCAATGTTGAGAACAATTAAAGCCCCTTTTCCTTGTATTGGCTTTACTCTTGAAAAGGTGAGCTTATAATCTATCTGGTGTATAATTTGATCTTATAATTGTAACAGAATTATATATTAAGGCTACATTTTATGCAATTATTTGTAAATGTCATAGACT

mRNA sequence

AAAAGGTAAAAGTGGGAGCCAGACAAAATGAATTGGCACGATGATGCAGACAAGGTTCGTGTCTTGGCATTACCTTCATCAACCACGAGCCTACACGCTCTTGATCCTATCTCCTCCATCTGCACCCTCCTCCTTCAACGGAGCTTCACCGCCGCCGCCGAAACCGCCGCCACTTTCACCTCTAACCCAAAGCTCCTTATTCACCCGTTTTCATTCCCACTGTAAACCAGACCAGAGCTTCACCCACCATTGTCGAACCATGAGCTCTAATCCCTTTCAATCTCACACCCTTCTCCTTCTTCTCTAGTTCAATTCCCCTCTCCCATGGCCGCCATTGAAGAACCCACCAAGCCCACTTCCCTCTACGACTCCCCATCGGCGTCTCAACCCCTCCTCTCCAATCCCCCTGAATCCGACTCATCTCAGTATCTTCAGATCTCCTACAACCATGGCGACAGACCGTTCAAGGACATCCCCATCCTTGTTCTTTTCCTTCTCTTCGTTTTATCCTCATTTGGGTTTGGGATTTTCGCCACTTTTAATCGAAACCCCAATTACCCAAATCTCTCTTCTTATCACTATGATTTCAAAACCTCCAATTGTGTTACGGATTCCCCCAATTGGGTTCCTCTGTACTCCTCTTCTTCCTCTGTTTTGAAATCCTTGATTTGGGCCCTTGTAGCTACTTCGATTTTAAGCTTACCCATTTGCTTTCTTTTACTTCTCTTGCTTAAGCACTACACGAGACAGATTGTGTACGCCTTACTTCCTTTCTTCGTCGTTGTTCCTATCTTCATCAATGTCTATTGGTTCGTCGCCTGTACGATTAACCCCACTTGTAATAACGACTTCCCCATGGTGTATAGGATTTTAGTTCTCATCTTCATATTCTTGGTGATTGGTGTAATCGTGTGGATATTCATCGTTAATTGGCACCGAATTGAGCTCACGATTAAGATAATTGGGGTTGCCGCGGATGCACTGTCAATGAATCTGGGTCTGTTTGTGGTTATACCGAGTATGACTCTGGGGTTACTGGTTTATTATGCGCCAATTGTTCTGTTCTTGGTGTTTGCGAGGTTGAATGGGAAGATTGTGCCCGATCACCATGGATCGAGTGGAGAGTATGCTTGTGTTTGGAAGGAAGACAAGTGGGTACCTGCTTATTATGCATTGGCGATTCTTACGATGTTGTGGTCTGCTGCTGTAATGGTGGAAGGGCAAGTTTATGTGATTAGTGGTACCATATCGCAGTGGTATTTCTCGAATGAAGAGGATGACACTCCAAGACGGAGTATTAGGAAGTCTTTAAGGAATGCATTTGGCCCCTCTGCTGGCACTATATGTTTATCTGGCTTACTAATTCTTGTGGCCGTGAGCCATCTTGGTGTTAAAACATACCTTGTCGCCATTGCAGCATGGCTTCTCCTGATCGTGGTACTCGCATTCTTTATCCATGTACTGGATAATGTAATCGAAACCGTGTACGTATGCTATGCTATTGACAGGGACAGAGGTGCAGTATGCAAACAAGATGTCCATGAGGTTTATGTTCACCTACCCATTAGCAGGAATCACAGATCATCTCTGATGACTGTGTTTGAGTATGCTATTCTGTGTATAATGAGTTGTCACCCTGTACATTTTGAGCCTTTCCCCCCACCTTTATGGGGTATTTTGGTAAGGCGATCTTTATATAAAGCCCCAACTCGGTTCACTCTCACTCGCGGTAGTCAATTTTCAGAGTTCCGAGAGTGTTCACAGACCAGTTCCCGACGAGACCTAACAATGGCGATGGCTTTCAAGATGGCAACCACTGGAATGTGGGTGAGCGATGAGTGCAAGAACTCGTTTATGGAGATGAAATGGAAGAAGGTGCATAGGTATATTGTGTTTAAGATCGATGAAGGATCGAGGTTAGTCACCGTTGACAAGGTCGGTGGTTCGGCCGAAAGCTACGATGATCTAACTGCATCATTGCCGAATGACGACTGTCGATACGCAGTGTTCGATTTCGACTTCGTCACCGTTGATAATTGCCGGAAGAGCAAGATCTTCTTCATCGCGTGGTCGCCCACCGCATCAAGAATTAGAGCAAAAATTCTATACGCAACTTCGAAAGCCGGGCTGAGGAGAGTGCTGGAAGGCATTCATTACGAGCTTCAAGCAACCGATCCAACTGAAATGGGGATGGATGTGATCAAGGACAGAGCCAAATAGATCAAAAAAAAAAAAAAAAAAAAAANCTTTGAGTTTCTAATAATGAATCACCACTCCAACCACATCCATTATCTGCTTTTCATTCTTTGTTTGTTCACTTTTTTGCCTTTTTCTTTGTGTTTTTTAGATTTTGAGCTCTAATGTAATTAAAAGTAAGATGAAAGAAAATTATCTTCCAATGTTGAGAACAATTAAAGCCCCTTTTCCTTGTATTGGCTTTACTCTTGAAAAGGTGAGCTTATAATCTATCTGGTGTATAATTTGATCTTATAATTGTAACAGAATTATATATTAAGGCTACATTTTATGCAATTATTTGTAAATGTCATAGACT

Coding sequence (CDS)

ATGGCCGCCATTGAAGAACCCACCAAGCCCACTTCCCTCTACGACTCCCCATCGGCGTCTCAACCCCTCCTCTCCAATCCCCCTGAATCCGACTCATCTCAGTATCTTCAGATCTCCTACAACCATGGCGACAGACCGTTCAAGGACATCCCCATCCTTGTTCTTTTCCTTCTCTTCGTTTTATCCTCATTTGGGTTTGGGATTTTCGCCACTTTTAATCGAAACCCCAATTACCCAAATCTCTCTTCTTATCACTATGATTTCAAAACCTCCAATTGTGTTACGGATTCCCCCAATTGGGTTCCTCTGTACTCCTCTTCTTCCTCTGTTTTGAAATCCTTGATTTGGGCCCTTGTAGCTACTTCGATTTTAAGCTTACCCATTTGCTTTCTTTTACTTCTCTTGCTTAAGCACTACACGAGACAGATTGTGTACGCCTTACTTCCTTTCTTCGTCGTTGTTCCTATCTTCATCAATGTCTATTGGTTCGTCGCCTGTACGATTAACCCCACTTGTAATAACGACTTCCCCATGGTGTATAGGATTTTAGTTCTCATCTTCATATTCTTGGTGATTGGTGTAATCGTGTGGATATTCATCGTTAATTGGCACCGAATTGAGCTCACGATTAAGATAATTGGGGTTGCCGCGGATGCACTGTCAATGAATCTGGGTCTGTTTGTGGTTATACCGAGTATGACTCTGGGGTTACTGGTTTATTATGCGCCAATTGTTCTGTTCTTGGTGTTTGCGAGGTTGAATGGGAAGATTGTGCCCGATCACCATGGATCGAGTGGAGAGTATGCTTGTGTTTGGAAGGAAGACAAGTGGGTACCTGCTTATTATGCATTGGCGATTCTTACGATGTTGTGGTCTGCTGCTGTAATGGTGGAAGGGCAAGTTTATGTGATTAGTGGTACCATATCGCAGTGGTATTTCTCGAATGAAGAGGATGACACTCCAAGACGGAGTATTAGGAAGTCTTTAAGGAATGCATTTGGCCCCTCTGCTGGCACTATATGTTTATCTGGCTTACTAATTCTTGTGGCCGTGAGCCATCTTGGTGTTAAAACATACCTTGTCGCCATTGCAGCATGGCTTCTCCTGATCGTGGTACTCGCATTCTTTATCCATGTACTGGATAATGTAATCGAAACCGTGTACGTATGCTATGCTATTGACAGGGACAGAGGTGCAGTATGCAAACAAGATGTCCATGAGGTTTATGTTCACCTACCCATTAGCAGGAATCACAGATCATCTCTGATGACTGTGTTTGAGTATGCTATTCTGTGTATAATGAGTTGTCACCCTGTACATTTTGAGCCTTTCCCCCCACCTTTATGGGGTATTTTGGTAAGGCGATCTTTATATAAAGCCCCAACTCGGTTCACTCTCACTCGCGGTAGTCAATTTTCAGAGTTCCGAGAGTGTTCACAGACCAGTTCCCGACGAGACCTAACAATGGCGATGGCTTTCAAGATGGCAACCACTGGAATGTGGGTGAGCGATGAGTGCAAGAACTCGTTTATGGAGATGAAATGGAAGAAGGTGCATAGGTATATTGTGTTTAAGATCGATGAAGGATCGAGGTTAGTCACCGTTGACAAGGTCGGTGGTTCGGCCGAAAGCTACGATGATCTAACTGCATCATTGCCGAATGACGACTGTCGATACGCAGTGTTCGATTTCGACTTCGTCACCGTTGATAATTGCCGGAAGAGCAAGATCTTCTTCATCGCGTGGTCGCCCACCGCATCAAGAATTAGAGCAAAAATTCTATACGCAACTTCGAAAGCCGGGCTGAGGAGAGTGCTGGAAGGCATTCATTACGAGCTTCAAGCAACCGATCCAACTGAAATGGGGATGGATGTGATCAAGGACAGAGCCAAATAG

Protein sequence

MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNHGDRPFKDIPILVLFLLFVLSSFGFGIFATFNRNPNYPNLSSYHYDFKTSNCVTDSPNWVPLYSSSSSVLKSLIWALVATSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTCNNDFPMVYRILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVYYAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQVYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILVAVSHLGVKTYLVAIAAWLLLIVVLAFFIHVLDNVIETVYVCYAIDRDRGAVCKQDVHEVYVHLPISRNHRSSLMTVFEYAILCIMSCHPVHFEPFPPPLWGILVRRSLYKAPTRFTLTRGSQFSEFRECSQTSSRRDLTMAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDLTASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEGIHYELQATDPTEMGMDVIKDRAK

Homology

[Close]

BLAST of Cp4.1LG16g03020 vs. ExPASy Swiss-Prot
Match: Q9ZNT3 (Actin-depolymerizing factor 5 OS=Arabidopsis thaliana OX=3702 GN=ADF5 PE=1 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 5.5e-65
Identity = 123/143 (86.01%), Postives = 131/143 (91.61%), Query Frame = 0


Query: 489 MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 548
           MAMAFKMATTGM V+DEC +SFM+MKWKKVHRYIVFKI+E SR VTVDKVGG+ ESY DL
Sbjct: 1   MAMAFKMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDL 60

Query: 549 TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 608
             SLP DDCRYAVFDFDFVTVDNCRKSKIFFIAWSP AS+IRAKILYATSK GLRRVLEG
Sbjct: 61  EDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEG 120

Query: 609 IHYELQATDPTEMGMDVIKDRAK 632
           IHYELQATDPTEMG D+I+DRAK
Sbjct: 121 IHYELQATDPTEMGFDIIQDRAK 143

[Close]

BLAST of Cp4.1LG16g03020 vs. ExPASy Swiss-Prot
Match: O49606 (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana OX=3702 GN=ADF9 PE=2 SV=2)

HSP 1 Score: 238.8 bits (608), Expect = 1.7e-61
Identity = 110/141 (78.01%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 491 MAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDLTA 550
           MA K AT+GMW++D+CK SFMEMKWKKVHRY+V+K++E SR VTVDKVG + ESYDDL A
Sbjct: 1   MALKTATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAA 60

Query: 551 SLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEGIH 610
           SLP DDCRYAVFDFD+VTVDNCR SKIFFI WSP ASRIR K++YATSK+GLRRVL+G+H
Sbjct: 61  SLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVH 120

Query: 611 YELQATDPTEMGMDVIKDRAK 632
           YELQATDPTEMG D I+DRAK
Sbjct: 121 YELQATDPTEMGFDKIQDRAK 141

[Close]

BLAST of Cp4.1LG16g03020 vs. ExPASy Swiss-Prot
Match: Q10P87 (Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF5 PE=2 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.5e-59
Identity = 110/143 (76.92%), Postives = 126/143 (88.11%), Query Frame = 0


Query: 489 MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 548
           MAMA+KMAT GM V +EC+  FMEMKWKKVHR++V+KIDE SR V VDKVGG  E Y++L
Sbjct: 1   MAMAYKMATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEEL 60

Query: 549 TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 608
            A+LP DDCRYAVFDFDFVTVDNC+KSKIFFIAWSPTASRIRAKILYATSK GLRRVL+G
Sbjct: 61  VAALPTDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDG 120

Query: 609 IHYELQATDPTEMGMDVIKDRAK 632
           +HYE+QATD +EMG DVI+ RA+
Sbjct: 121 VHYEVQATDSSEMGYDVIRGRAQ 143

[Close]

BLAST of Cp4.1LG16g03020 vs. ExPASy Swiss-Prot
Match: Q8SAG3 (Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.8e-48
Identity = 88/135 (65.19%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 496 ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDLTASLPND 555
           A++GM V+D  KN+F+E+K KKVHRY++FKIDE  + V V+K GG AES+D+  A+LP +
Sbjct: 8   ASSGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPEN 67

Query: 556 DCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEGIHYELQA 615
           DCRYAV+DFDFVT +NC+KSKIFFIAWSP +SRIRAK+LYATSK   RR L+G+HYE+QA
Sbjct: 68  DCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRELDGVHYEIQA 127

Query: 616 TDPTEMGMDVIKDRA 631
           TDPTEM ++V+++RA
Sbjct: 128 TDPTEMDLEVLRERA 142

[Close]

BLAST of Cp4.1LG16g03020 vs. ExPASy Swiss-Prot
Match: Q9ZSK2 (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.7e-45
Identity = 85/135 (62.96%), Postives = 110/135 (81.48%), Query Frame = 0


Query: 496 ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDLTASLPND 555
           A +GM V+DE K +F+E++ KK HRY+VFKIDE  + V V+K G   ESYDD  ASLP++
Sbjct: 11  AISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDN 70

Query: 556 DCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEGIHYELQA 615
           DCRYAV+DFDFVT +NC+KSKIFF AWSP+ S IRAK+LY+TSK  L R L+GIHYE+QA
Sbjct: 71  DCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQA 130

Query: 616 TDPTEMGMDVIKDRA 631
           TDPTE+ ++V+++RA
Sbjct: 131 TDPTEVDLEVLRERA 145

[Close]

BLAST of Cp4.1LG16g03020 vs. NCBI nr
Match: KAG6571025.1 (Actin-depolymerizing factor 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1150 bits (2976), Expect = 0.0
Identity = 615/766 (80.29%), Postives = 621/766 (81.07%), Query Frame = 0


Query: 1   MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNHGDRPFKDIPILVLFLLFV 60
           MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNHGDRPFKDIPILVLFLLFV
Sbjct: 1   MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNHGDRPFKDIPILVLFLLFV 60

Query: 61  LSSFGFGIFATFNRNPNYPNLSSYHYDFKTSNCVTDSPNWVPLYSSSSSVLKSLIWALVA 120
            SSFGFGIFATFNRNP+YPNLSSYHYDFKTSNCVTDSPNWVPLYSSSSSVLKSLIW LVA
Sbjct: 61  FSSFGFGIFATFNRNPSYPNLSSYHYDFKTSNCVTDSPNWVPLYSSSSSVLKSLIWTLVA 120

Query: 121 TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTCNNDFPMVY 180
           TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTC+NDFPMVY
Sbjct: 121 TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTCSNDFPMVY 180

Query: 181 RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY 240
           RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY
Sbjct: 181 RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY 240

Query: 241 YAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ 300
           YAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ
Sbjct: 241 YAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ 300

Query: 301 VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILV----------- 360
           VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILV           
Sbjct: 301 VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILVVRVVRAVVDSA 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 RQEDIPGMFNLILRCCVNTFLAAVDYLNKFAITFAAITGEAYCSSAKMTYELLKRNLLST 420

Query: 421 -------------------------------AVSHLGVKTYLVAIAAWLLLIVVLAFFIH 480
                                          AVSHLGVKTYLV +AAWLLLIVVLAFFIH
Sbjct: 421 VFVETISTRLLAGIAFVVSAIYAIVACAILQAVSHLGVKTYLVTVAAWLLLIVVLAFFIH 480

Query: 481 VLDNVIETVYVCYAIDRDRGAVCKQDVHEVYVHLPISRNHRSSLMTVFEYAILCIMSCHP 540
           VLDNVIETVYVCYAIDRDRGAVCKQDVHEVYVHLPISRNHRSSLMTVFEYA+LCIMSCHP
Sbjct: 481 VLDNVIETVYVCYAIDRDRGAVCKQDVHEVYVHLPISRNHRSSLMTVFEYAVLCIMSCHP 540

Query: 541 VHFEPFPPPLW---------------------------------GILVRRSLYKAPTRFT 600
           VHFEP   P +                                 GILVRRSLYKAPTRF 
Sbjct: 541 VHFEPLSTPTFKAEPLCTVMYVENREKEIRVTPLSPNWTVRFVRGILVRRSLYKAPTRFA 600

Query: 601 LTRGSQFSEFRECSQTSSRRDLTMAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFK 631
            TRGSQFSEFRECSQTSSRRDLTMAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFK
Sbjct: 601 FTRGSQFSEFRECSQTSSRRDLTMAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFK 660

[Close]

BLAST of Cp4.1LG16g03020 vs. NCBI nr
Match: XP_023512915.1 (CTL-like protein DDB_G0274487 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 774 bits (1998), Expect = 1.02e-275
Identity = 423/526 (80.42%), Postives = 424/526 (80.61%), Query Frame = 0


Query: 1   MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNHGDRPFKDIPILVLFLLFV 60
           MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNHGDRPFKDIPILVLFLLFV
Sbjct: 1   MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNHGDRPFKDIPILVLFLLFV 60

Query: 61  LSSFGFGIFATFNRNPNYPNLSSYHYDFKTSNCVTDSPNWVPLYSSSSSVLKSLIWALVA 120
           LSSFGFGIFATFNRNPNYPNLSSYHYDFKTSNCVTDSPNWVPLYSSSSSVLKSLIWALVA
Sbjct: 61  LSSFGFGIFATFNRNPNYPNLSSYHYDFKTSNCVTDSPNWVPLYSSSSSVLKSLIWALVA 120

Query: 121 TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTCNNDFPMVY 180
           TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTCNNDFPMVY
Sbjct: 121 TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTCNNDFPMVY 180

Query: 181 RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY 240
           RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY
Sbjct: 181 RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY 240

Query: 241 YAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ 300
           YAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ
Sbjct: 241 YAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ 300

Query: 301 VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILV----------- 360
           VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILV           
Sbjct: 301 VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILVVRVVRAVVDSA 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 RQEDIPGMFNLILRCCVNTFLAAVDYLNKFAITFAAITGEAYCSSAKMTYELLKRNLLST 420

Query: 421 -------------------------------AVSHLGVKTYLVAIAAWLLLIVVLAFFIH 424
                                          AVSHLGVKTYLVAIAAWLLLIVVLAFFIH
Sbjct: 421 VFVETISTRLLAGIAFVVSAIYAIVACAILQAVSHLGVKTYLVAIAAWLLLIVVLAFFIH 480

[Close]

BLAST of Cp4.1LG16g03020 vs. NCBI nr
Match: XP_022985693.1 (protein PNS1-like [Cucurbita maxima])

HSP 1 Score: 764 bits (1972), Expect = 9.08e-272
Identity = 417/526 (79.28%), Postives = 420/526 (79.85%), Query Frame = 0


Query: 1   MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNHGDRPFKDIPILVLFLLFV 60
           MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNHGDRPFKDIPILVLFLLFV
Sbjct: 1   MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNHGDRPFKDIPILVLFLLFV 60

Query: 61  LSSFGFGIFATFNRNPNYPNLSSYHYDFKTSNCVTDSPNWVPLYSSSSSVLKSLIWALVA 120
            SSFGFGIFATFNRNPNYPNLSSYHYDFKTSNCVTDSPNWVPLYSSSSSVLKSLIW LVA
Sbjct: 61  FSSFGFGIFATFNRNPNYPNLSSYHYDFKTSNCVTDSPNWVPLYSSSSSVLKSLIWTLVA 120

Query: 121 TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTCNNDFPMVY 180
           TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTC+NDFPMVY
Sbjct: 121 TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTCSNDFPMVY 180

Query: 181 RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY 240
           RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY
Sbjct: 181 RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY 240

Query: 241 YAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ 300
           YAPIVLFLVFARLNGKIVPDH GSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ
Sbjct: 241 YAPIVLFLVFARLNGKIVPDHRGSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ 300

Query: 301 VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILV----------- 360
           VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILV           
Sbjct: 301 VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILVVRVVRAVVDIA 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 RQEDIPGMFNLILRCCVNTFLAAVDYLNKFAITFAAITGEAYCSSAKMTYELLKRNLLST 420

Query: 421 -------------------------------AVSHLGVKTYLVAIAAWLLLIVVLAFFIH 424
                                          AVSHLGVKTYLVA+AAWLLLIVVL FFIH
Sbjct: 421 VFVETISTRLLAGIAFVVSAIYAIVACAILQAVSHLGVKTYLVAVAAWLLLIVVLTFFIH 480

[Close]

BLAST of Cp4.1LG16g03020 vs. NCBI nr
Match: XP_022943993.1 (protein PNS1-like [Cucurbita moschata])

HSP 1 Score: 760 bits (1963), Expect = 2.12e-270
Identity = 416/526 (79.09%), Postives = 420/526 (79.85%), Query Frame = 0


Query: 1   MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNHGDRPFKDIPILVLFLLFV 60
           MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYN GDRPFKDIPILVLFLLFV
Sbjct: 1   MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNLGDRPFKDIPILVLFLLFV 60

Query: 61  LSSFGFGIFATFNRNPNYPNLSSYHYDFKTSNCVTDSPNWVPLYSSSSSVLKSLIWALVA 120
           LSSFGFGIFATFNRNPNYPNLSSYHYD K+SNCVTDSPNWVPLYSSSSSVLKSLIW LVA
Sbjct: 61  LSSFGFGIFATFNRNPNYPNLSSYHYDIKSSNCVTDSPNWVPLYSSSSSVLKSLIWTLVA 120

Query: 121 TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTCNNDFPMVY 180
           TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTC+NDFPMVY
Sbjct: 121 TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTCSNDFPMVY 180

Query: 181 RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY 240
           RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY
Sbjct: 181 RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY 240

Query: 241 YAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ 300
           YAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ
Sbjct: 241 YAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ 300

Query: 301 VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILV----------- 360
           VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILV           
Sbjct: 301 VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILVVRVVRAVVDSA 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 RQEDIPGMFNLILRCCVNTFLAAVDYLNKFAITFAAITGEAYCSSAKMTYELLKRNLLST 420

Query: 421 -------------------------------AVSHLGVKTYLVAIAAWLLLIVVLAFFIH 424
                                          AVSHLGVKTYLV +AAWLLLIVVLAFFIH
Sbjct: 421 VFVETISTRLLAGIAFVVSAIYAIVACAILQAVSHLGVKTYLVTVAAWLLLIVVLAFFIH 480

[Close]

BLAST of Cp4.1LG16g03020 vs. NCBI nr
Match: KAG7010857.1 (Choline transporter-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 751 bits (1940), Expect = 1.26e-267
Identity = 405/486 (83.33%), Postives = 411/486 (84.57%), Query Frame = 0


Query: 1   MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNHGDRPFKDIPILVLFLLFV 60
           MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNHGDRPFKDIPILVLFLLFV
Sbjct: 1   MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNHGDRPFKDIPILVLFLLFV 60

Query: 61  LSSFGFGIFATFNRNPNYPNLSSYHYDFKTSNCVTDSPNWVPLYSSSSSVLKSLIWALVA 120
           LSSFGFGIFATFNRNPNYPNLSSYHYD K+SNCVTDSPNWVPLYSSSSSVLKSLIW LVA
Sbjct: 61  LSSFGFGIFATFNRNPNYPNLSSYHYDIKSSNCVTDSPNWVPLYSSSSSVLKSLIWTLVA 120

Query: 121 TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTCNNDFPMVY 180
           TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTC+NDFPMVY
Sbjct: 121 TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTCSNDFPMVY 180

Query: 181 RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY 240
           RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY
Sbjct: 181 RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY 240

Query: 241 YAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ 300
           YAPIVLFLVFARLNGKIVPDHHGSSG+YACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ
Sbjct: 241 YAPIVLFLVFARLNGKIVPDHHGSSGKYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ 300

Query: 301 VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILVA---------- 360
           VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILV           
Sbjct: 301 VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILVVRVVRAVVDSA 360

Query: 361 -----------VSHLGVKTYLVAI------------------------------------ 420
                      +    V T+L A+                                    
Sbjct: 361 RQEDIPGMFNLILRCCVNTFLAAVDYLNKFAITFAAITGEAYCSSAKMTYELLKRNLLST 420

Query: 421 -------AAWLLLIVVLAFFIHVLDNVIETVYVCYAIDRDRGAVCKQDVHEVYVHLPISR 422
                    WLLLIVVLAFFIHVLDNVIETVYVCYAIDRDRGAVCKQDVHEVYVHLPISR
Sbjct: 421 VFVETISTPWLLLIVVLAFFIHVLDNVIETVYVCYAIDRDRGAVCKQDVHEVYVHLPISR 480

[Close]

BLAST of Cp4.1LG16g03020 vs. ExPASy TrEMBL
Match: A0A6J1JED1 (protein PNS1-like OS=Cucurbita maxima OX=3661 GN=LOC111483673 PE=3 SV=1)

HSP 1 Score: 764 bits (1972), Expect = 4.40e-272
Identity = 417/526 (79.28%), Postives = 420/526 (79.85%), Query Frame = 0


Query: 1   MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNHGDRPFKDIPILVLFLLFV 60
           MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNHGDRPFKDIPILVLFLLFV
Sbjct: 1   MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNHGDRPFKDIPILVLFLLFV 60

Query: 61  LSSFGFGIFATFNRNPNYPNLSSYHYDFKTSNCVTDSPNWVPLYSSSSSVLKSLIWALVA 120
            SSFGFGIFATFNRNPNYPNLSSYHYDFKTSNCVTDSPNWVPLYSSSSSVLKSLIW LVA
Sbjct: 61  FSSFGFGIFATFNRNPNYPNLSSYHYDFKTSNCVTDSPNWVPLYSSSSSVLKSLIWTLVA 120

Query: 121 TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTCNNDFPMVY 180
           TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTC+NDFPMVY
Sbjct: 121 TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTCSNDFPMVY 180

Query: 181 RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY 240
           RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY
Sbjct: 181 RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY 240

Query: 241 YAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ 300
           YAPIVLFLVFARLNGKIVPDH GSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ
Sbjct: 241 YAPIVLFLVFARLNGKIVPDHRGSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ 300

Query: 301 VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILV----------- 360
           VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILV           
Sbjct: 301 VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILVVRVVRAVVDIA 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 RQEDIPGMFNLILRCCVNTFLAAVDYLNKFAITFAAITGEAYCSSAKMTYELLKRNLLST 420

Query: 421 -------------------------------AVSHLGVKTYLVAIAAWLLLIVVLAFFIH 424
                                          AVSHLGVKTYLVA+AAWLLLIVVL FFIH
Sbjct: 421 VFVETISTRLLAGIAFVVSAIYAIVACAILQAVSHLGVKTYLVAVAAWLLLIVVLTFFIH 480

[Close]

BLAST of Cp4.1LG16g03020 vs. ExPASy TrEMBL
Match: A0A6J1FXK3 (protein PNS1-like OS=Cucurbita moschata OX=3662 GN=LOC111448556 PE=3 SV=1)

HSP 1 Score: 760 bits (1963), Expect = 1.03e-270
Identity = 416/526 (79.09%), Postives = 420/526 (79.85%), Query Frame = 0


Query: 1   MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNHGDRPFKDIPILVLFLLFV 60
           MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYN GDRPFKDIPILVLFLLFV
Sbjct: 1   MAAIEEPTKPTSLYDSPSASQPLLSNPPESDSSQYLQISYNLGDRPFKDIPILVLFLLFV 60

Query: 61  LSSFGFGIFATFNRNPNYPNLSSYHYDFKTSNCVTDSPNWVPLYSSSSSVLKSLIWALVA 120
           LSSFGFGIFATFNRNPNYPNLSSYHYD K+SNCVTDSPNWVPLYSSSSSVLKSLIW LVA
Sbjct: 61  LSSFGFGIFATFNRNPNYPNLSSYHYDIKSSNCVTDSPNWVPLYSSSSSVLKSLIWTLVA 120

Query: 121 TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTCNNDFPMVY 180
           TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTC+NDFPMVY
Sbjct: 121 TSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFINVYWFVACTINPTCSNDFPMVY 180

Query: 181 RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY 240
           RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY
Sbjct: 181 RILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAADALSMNLGLFVVIPSMTLGLLVY 240

Query: 241 YAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ 300
           YAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ
Sbjct: 241 YAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKEDKWVPAYYALAILTMLWSAAVMVEGQ 300

Query: 301 VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILV----------- 360
           VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILV           
Sbjct: 301 VYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAGTICLSGLLILVVRVVRAVVDSA 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 RQEDIPGMFNLILRCCVNTFLAAVDYLNKFAITFAAITGEAYCSSAKMTYELLKRNLLST 420

Query: 421 -------------------------------AVSHLGVKTYLVAIAAWLLLIVVLAFFIH 424
                                          AVSHLGVKTYLV +AAWLLLIVVLAFFIH
Sbjct: 421 VFVETISTRLLAGIAFVVSAIYAIVACAILQAVSHLGVKTYLVTVAAWLLLIVVLAFFIH 480

[Close]

BLAST of Cp4.1LG16g03020 vs. ExPASy TrEMBL
Match: A0A5D3BJS4 (CTL-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001230 PE=3 SV=1)

HSP 1 Score: 663 bits (1710), Expect = 6.53e-232
Identity = 375/551 (68.06%), Postives = 400/551 (72.60%), Query Frame = 0


Query: 1   MAAIEEPTKPTSLYDSPSAS-QPLLSNPP------------------ESDSSQYLQISYN 60
           MA+ EEP KPTSL+DS S+S QPLLSN P                  ESDSSQ+LQISYN
Sbjct: 1   MASAEEPNKPTSLFDSSSSSSQPLLSNSPASLFPYPSIDDPPHNNPHESDSSQFLQISYN 60

Query: 61  HGDRPFKDIPILVLFLLFVLSSFGFGIFATFNRNPNYPNLSSYHYDFKTSNCV------T 120
           +G RPFKDIPILVLFLLFV+SSFGFGIFA+FNRN +YP+LS YH+D KTSNCV      +
Sbjct: 61  YGHRPFKDIPILVLFLLFVVSSFGFGIFASFNRNIHYPDLSFYHFDSKTSNCVMMNSLSS 120

Query: 121 DSPNWVPLYSSSSSVLKSLIWALVATSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVP 180
            S NWV LYS+SSSV KSLIW LV T ILSLPICFLLLLLLKHYTRQIVYALLPFFV+VP
Sbjct: 121 SSFNWVSLYSTSSSVFKSLIWTLVVTLILSLPICFLLLLLLKHYTRQIVYALLPFFVLVP 180

Query: 181 IFINVYWFVACTINPTCNNDFPMVYRILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGV 240
           IFINVYWFVACT+N TC+NDFPMVYRILVLIFIFLVIGVIVWIFIVNWHRIELTI+IIGV
Sbjct: 181 IFINVYWFVACTVNSTCSNDFPMVYRILVLIFIFLVIGVIVWIFIVNWHRIELTIQIIGV 240

Query: 241 AADALSMNLGLFVVIPSMTLGLLVYYAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKED 300
           A+DALSMNLGLFV IPSMTLGLL+Y+APIVLFLVFAR+NGKI+P HH SSGEY+CVWKED
Sbjct: 241 ASDALSMNLGLFVAIPSMTLGLLIYFAPIVLFLVFARMNGKILPRHHASSGEYSCVWKED 300

Query: 301 KWVPAYYALAILTMLWSAAVMVEGQVYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGP 360
           KWVPAYYALAILTMLWSAAVMVEGQVYVISGTISQWYFS EEDDTPRRSIRKSLRNAFGP
Sbjct: 301 KWVPAYYALAILTMLWSAAVMVEGQVYVISGTISQWYFSKEEDDTPRRSIRKSLRNAFGP 360

Query: 361 SAGTICLSGLLILV---------------------------------------------- 420
           SAGTICLSGLLILV                                              
Sbjct: 361 SAGTICLSGLLILVVRVVRAVVDSARQEDIPGMFNLILRCCVNTFLAAVDYLNKFAITFA 420

Query: 421 --------------------------------------------------------AVSH 424
                                                                   AVSH
Sbjct: 421 AITGEAYCSSARMTYELLKRNLLSTVFVETISTRLLAGIAFVLSAIYAIVACAILHAVSH 480

[Close]

BLAST of Cp4.1LG16g03020 vs. ExPASy TrEMBL
Match: A0A1S3C612 (CTL-like protein DDB_G0288717 OS=Cucumis melo OX=3656 GN=LOC103497321 PE=3 SV=1)

HSP 1 Score: 663 bits (1710), Expect = 6.53e-232
Identity = 375/551 (68.06%), Postives = 400/551 (72.60%), Query Frame = 0


Query: 1   MAAIEEPTKPTSLYDSPSAS-QPLLSNPP------------------ESDSSQYLQISYN 60
           MA+ EEP KPTSL+DS S+S QPLLSN P                  ESDSSQ+LQISYN
Sbjct: 1   MASAEEPNKPTSLFDSSSSSSQPLLSNSPASLFPYPSIDDPPHNNPHESDSSQFLQISYN 60

Query: 61  HGDRPFKDIPILVLFLLFVLSSFGFGIFATFNRNPNYPNLSSYHYDFKTSNCV------T 120
           +G RPFKDIPILVLFLLFV+SSFGFGIFA+FNRN +YP+LS YH+D KTSNCV      +
Sbjct: 61  YGHRPFKDIPILVLFLLFVVSSFGFGIFASFNRNIHYPDLSFYHFDSKTSNCVMMNSLSS 120

Query: 121 DSPNWVPLYSSSSSVLKSLIWALVATSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVP 180
            S NWV LYS+SSSV KSLIW LV T ILSLPICFLLLLLLKHYTRQIVYALLPFFV+VP
Sbjct: 121 SSFNWVSLYSTSSSVFKSLIWTLVVTLILSLPICFLLLLLLKHYTRQIVYALLPFFVLVP 180

Query: 181 IFINVYWFVACTINPTCNNDFPMVYRILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGV 240
           IFINVYWFVACT+N TC+NDFPMVYRILVLIFIFLVIGVIVWIFIVNWHRIELTI+IIGV
Sbjct: 181 IFINVYWFVACTVNSTCSNDFPMVYRILVLIFIFLVIGVIVWIFIVNWHRIELTIQIIGV 240

Query: 241 AADALSMNLGLFVVIPSMTLGLLVYYAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKED 300
           A+DALSMNLGLFV IPSMTLGLL+Y+APIVLFLVFAR+NGKI+P HH SSGEY+CVWKED
Sbjct: 241 ASDALSMNLGLFVAIPSMTLGLLIYFAPIVLFLVFARMNGKILPRHHASSGEYSCVWKED 300

Query: 301 KWVPAYYALAILTMLWSAAVMVEGQVYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGP 360
           KWVPAYYALAILTMLWSAAVMVEGQVYVISGTISQWYFS EEDDTPRRSIRKSLRNAFGP
Sbjct: 301 KWVPAYYALAILTMLWSAAVMVEGQVYVISGTISQWYFSKEEDDTPRRSIRKSLRNAFGP 360

Query: 361 SAGTICLSGLLILV---------------------------------------------- 420
           SAGTICLSGLLILV                                              
Sbjct: 361 SAGTICLSGLLILVVRVVRAVVDSARQEDIPGMFNLILRCCVNTFLAAVDYLNKFAITFA 420

Query: 421 --------------------------------------------------------AVSH 424
                                                                   AVSH
Sbjct: 421 AITGEAYCSSARMTYELLKRNLLSTVFVETISTRLLAGIAFVLSAIYAIVACAILHAVSH 480

[Close]

BLAST of Cp4.1LG16g03020 vs. ExPASy TrEMBL
Match: A0A0A0LJF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G270160 PE=3 SV=1)

HSP 1 Score: 657 bits (1695), Expect = 1.23e-229
Identity = 371/551 (67.33%), Postives = 396/551 (71.87%), Query Frame = 0


Query: 1   MAAIEEPTKPTSLYDSPSAS-QPLLSNPP------------------ESDSSQYLQISYN 60
           MA+ EEP KPTSL+DS S+S QPLLSN P                  ESD SQ+LQISYN
Sbjct: 1   MASSEEPNKPTSLFDSSSSSSQPLLSNSPASLFPYPSIDDPPHSNPHESDPSQFLQISYN 60

Query: 61  HGDRPFKDIPILVLFLLFVLSSFGFGIFATFNRNPNYPNLSSYHYDFKTSNCV------T 120
           +G RPFKD+PILVLFLLFVLSSFGFGIFA+FNRN +YP+LS YH+D KTSNCV      +
Sbjct: 61  YGHRPFKDVPILVLFLLFVLSSFGFGIFASFNRNIHYPDLSFYHFDSKTSNCVMTNSLSS 120

Query: 121 DSPNWVPLYSSSSSVLKSLIWALVATSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVP 180
            S  WV LYS SSSV KSLIW LV T +LSLPICFLLLLLLKHYTRQIVYALLPFFV+VP
Sbjct: 121 SSFIWVSLYSPSSSVFKSLIWTLVVTLVLSLPICFLLLLLLKHYTRQIVYALLPFFVLVP 180

Query: 181 IFINVYWFVACTINPTCNNDFPMVYRILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGV 240
           IFINVYWFVACT+NPTC+NDFPMVYRILVLIFIFLVIGVIVWIFIVNWHRIELTI+IIGV
Sbjct: 181 IFINVYWFVACTVNPTCSNDFPMVYRILVLIFIFLVIGVIVWIFIVNWHRIELTIQIIGV 240

Query: 241 AADALSMNLGLFVVIPSMTLGLLVYYAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKED 300
           A+DALSMNLGLFV IPSMTLGLL+YYAPIVLFLVFAR+NGKI+P HH SSGEY+CVWKED
Sbjct: 241 ASDALSMNLGLFVAIPSMTLGLLIYYAPIVLFLVFARMNGKILPHHHVSSGEYSCVWKED 300

Query: 301 KWVPAYYALAILTMLWSAAVMVEGQVYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGP 360
           KWVPAYYALAILTMLWS AVMVEGQVYVISGTISQWYFS EEDDTPRRSIRKSLRNAFGP
Sbjct: 301 KWVPAYYALAILTMLWSGAVMVEGQVYVISGTISQWYFSKEEDDTPRRSIRKSLRNAFGP 360

Query: 361 SAGTICLSGLLILV---------------------------------------------- 420
           SAGTICLSGLLILV                                              
Sbjct: 361 SAGTICLSGLLILVVRVVRAVVDSARQEDIPGMFNLILRCCVNTFLAAVDYLNKFAITFA 420

Query: 421 --------------------------------------------------------AVSH 424
                                                                   AVSH
Sbjct: 421 AVTGEAYCSSARMTYELLKRNLLSTVFVETISTRLLAGIAFVLSAIYAIVACAILHAVSH 480

[Close]

BLAST of Cp4.1LG16g03020 vs. TAIR 10
Match: AT4G38640.1 (Plasma-membrane choline transporter family protein )

HSP 1 Score: 477.6 bits (1228), Expect = 1.5e-134
Identity = 283/547 (51.74%), Postives = 343/547 (62.71%), Query Frame = 0


Query: 6   EPTKPTSLYDSPSASQPLLSNP------------PESDSSQYLQISYNHGDRPFKDIPIL 65
           +PTK  ++YDS S S PLLS P            PESD +Q+LQISYN G R FKDIP L
Sbjct: 7   DPTKFAAIYDSSSPSHPLLSKPSTSALDSPRRSDPESDPTQFLQISYNFGPRTFKDIPFL 66

Query: 66  VLFLLFVLSSFGFGIFATFNRNPNYPNLSSYHYDFKTSNCV--------TDSPNWVP--- 125
           +LF L VLS+FGFGIF+ F+RN +Y N SS+ YDF +S+CV        +D   W     
Sbjct: 67  LLFDLLVLSTFGFGIFSIFHRNNDYGNSSSFTYDFTSSSCVKNSTFTKISDGYYWASSSV 126

Query: 126 ---LYSSSSSVL-KSLIWALVATSILSLPICFLLLLLLKHYTRQIVYALLPFFVVVPIFI 185
              + SSS  V  K LIW LV T ILS+P CF +LLLLKHYT+QIVYA LP FV+ PIF 
Sbjct: 127 MYGMVSSSDPVFEKDLIWTLVVTLILSVPFCFSVLLLLKHYTKQIVYACLPLFVLFPIFF 186

Query: 186 NVYWFVACTINPTCNNDFPMVYRILVLIFIFLVIGVIVWIFIVNWHRIELTIKIIGVAAD 245
           NVYWFVACT++ +C++  P+ YRILVL+F+FL+IG+IVWI + NWHRI+LTI+II VA+D
Sbjct: 187 NVYWFVACTLSSSCSDALPLAYRILVLVFVFLIIGIIVWIIVANWHRIDLTIQIISVASD 246

Query: 246 ALSMNLGLFVVIPSMTLGLLVYYAPIVLFLVFARLNGKIVPDHHGSSGEYACVWKEDKWV 305
           ALS NL LFVV+P +TLGL+VYYAPIV+FLVFAR NGK VP      G+Y C WKED WV
Sbjct: 247 ALSKNLKLFVVLPLLTLGLVVYYAPIVVFLVFARFNGKFVP--RELDGQYFCEWKEDSWV 306

Query: 306 PAYYALAILTMLWSAAVMVEGQVYVISGTISQWYFSNEEDDTPRRSIRKSLRNAFGPSAG 365
           PAYYALAILTM+WS AVMVE QVYVISG I+QWYFS +ED  P++ IR SLRNAFG S G
Sbjct: 307 PAYYALAILTMIWSLAVMVEMQVYVISGAIAQWYFS-KEDSIPKKCIRSSLRNAFGQSFG 366

Query: 366 TICLSGLLILV------------------------------------------------- 424
           TIC+SGLLI +                                                 
Sbjct: 367 TICVSGLLICIVRVVRAIVDNAREENTQGIVNMVLRCCANALLGALDYLNKFTINFAAIT 426

[Close]

BLAST of Cp4.1LG16g03020 vs. TAIR 10
Match: AT2G16700.1 (actin depolymerizing factor 5 )

HSP 1 Score: 250.4 bits (638), Expect = 3.9e-66
Identity = 123/143 (86.01%), Postives = 131/143 (91.61%), Query Frame = 0


Query: 489 MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 548
           MAMAFKMATTGM V+DEC +SFM+MKWKKVHRYIVFKI+E SR VTVDKVGG+ ESY DL
Sbjct: 1   MAMAFKMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDL 60

Query: 549 TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 608
             SLP DDCRYAVFDFDFVTVDNCRKSKIFFIAWSP AS+IRAKILYATSK GLRRVLEG
Sbjct: 61  EDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEG 120

Query: 609 IHYELQATDPTEMGMDVIKDRAK 632
           IHYELQATDPTEMG D+I+DRAK
Sbjct: 121 IHYELQATDPTEMGFDIIQDRAK 143

[Close]

BLAST of Cp4.1LG16g03020 vs. TAIR 10
Match: AT4G34970.1 (actin depolymerizing factor 9 )

HSP 1 Score: 238.8 bits (608), Expect = 1.2e-62
Identity = 110/141 (78.01%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 491 MAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDLTA 550
           MA K AT+GMW++D+CK SFMEMKWKKVHRY+V+K++E SR VTVDKVG + ESYDDL A
Sbjct: 1   MALKTATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAA 60

Query: 551 SLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEGIH 610
           SLP DDCRYAVFDFD+VTVDNCR SKIFFI WSP ASRIR K++YATSK+GLRRVL+G+H
Sbjct: 61  SLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVH 120

Query: 611 YELQATDPTEMGMDVIKDRAK 632
           YELQATDPTEMG D I+DRAK
Sbjct: 121 YELQATDPTEMGFDKIQDRAK 141

[Close]

BLAST of Cp4.1LG16g03020 vs. TAIR 10
Match: AT2G16700.2 (actin depolymerizing factor 5 )

HSP 1 Score: 229.9 bits (585), Expect = 5.5e-60
Identity = 112/132 (84.85%), Postives = 120/132 (90.91%), Query Frame = 0


Query: 500 MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDLTASLPNDDCRY 559
           M V+DEC +SFM+MKWKKVHRYIVFKI+E SR VTVDKVGG+ ESY DL  SLP DDCRY
Sbjct: 1   MRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVDDCRY 60

Query: 560 AVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEGIHYELQATDPT 619
           AVFDFDFVTVDNCRKSKIFFIAWSP AS+IRAKILYATSK GLRRVLEGIHYELQATDPT
Sbjct: 61  AVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPT 120

Query: 620 EMGMDVIKDRAK 632
           EMG D+I+DRAK
Sbjct: 121 EMGFDIIQDRAK 132

[Close]

BLAST of Cp4.1LG16g03020 vs. TAIR 10
Match: AT2G31200.1 (actin depolymerizing factor 6 )

HSP 1 Score: 185.7 bits (470), Expect = 1.2e-46
Identity = 85/135 (62.96%), Postives = 110/135 (81.48%), Query Frame = 0


Query: 496 ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDLTASLPND 555
           A +GM V+DE K +F+E++ KK HRY+VFKIDE  + V V+K G   ESYDD  ASLP++
Sbjct: 11  AISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDN 70

Query: 556 DCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEGIHYELQA 615
           DCRYAV+DFDFVT +NC+KSKIFF AWSP+ S IRAK+LY+TSK  L R L+GIHYE+QA
Sbjct: 71  DCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQA 130

Query: 616 TDPTEMGMDVIKDRA 631
           TDPTE+ ++V+++RA
Sbjct: 131 TDPTEVDLEVLRERA 145

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g03020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZNT3	5.5e-65	86.01	Actin-depolymerizing factor 5 OS=Arabidopsis thaliana OX=3702 GN=ADF5 PE=1 SV=1	[more]
O49606	1.7e-61	78.01	Actin-depolymerizing factor 9 OS=Arabidopsis thaliana OX=3702 GN=ADF9 PE=2 SV=2	[more]
Q10P87	3.5e-59	76.92	Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF5 P...	[more]
Q8SAG3	2.8e-48	65.19	Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1	[more]
Q9ZSK2	1.7e-45	62.96	Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1	[more]

BLAST of Cp4.1LG16g03020 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571025.1	0.0	80.29	Actin-depolymerizing factor 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023512915.1	1.02e-275	80.42	CTL-like protein DDB_G0274487 [Cucurbita pepo subsp. pepo]	[more]
XP_022985693.1	9.08e-272	79.28	protein PNS1-like [Cucurbita maxima]	[more]
XP_022943993.1	2.12e-270	79.09	protein PNS1-like [Cucurbita moschata]	[more]
KAG7010857.1	1.26e-267	83.33	Choline transporter-like protein 3, partial [Cucurbita argyrosperma subsp. argyr...	[more]

BLAST of Cp4.1LG16g03020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JED1	4.40e-272	79.28	protein PNS1-like OS=Cucurbita maxima OX=3661 GN=LOC111483673 PE=3 SV=1	[more]
A0A6J1FXK3	1.03e-270	79.09	protein PNS1-like OS=Cucurbita moschata OX=3662 GN=LOC111448556 PE=3 SV=1	[more]
A0A5D3BJS4	6.53e-232	68.06	CTL-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001...	[more]
A0A1S3C612	6.53e-232	68.06	CTL-like protein DDB_G0288717 OS=Cucumis melo OX=3656 GN=LOC103497321 PE=3 SV=1	[more]
A0A0A0LJF3	1.23e-229	67.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G270160 PE=3 SV=1	[more]

BLAST of Cp4.1LG16g03020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38640.1	1.5e-134	51.74	Plasma-membrane choline transporter family protein	[more]
AT2G16700.1	3.9e-66	86.01	actin depolymerizing factor 5	[more]
AT4G34970.1	1.2e-62	78.01	actin depolymerizing factor 9	[more]
AT2G16700.2	5.5e-60	84.85	actin depolymerizing factor 5	[more]
AT2G31200.1	1.2e-46	62.96	actin depolymerizing factor 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 504..631 e-value: 8.9E-49 score: 178.0
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 506..628 e-value: 4.0E-31 score: 107.4
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 499..631 score: 35.84478
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 496..631 e-value: 8.8E-43 score: 147.3
IPR007603	Choline transporter-like	PFAM	PF04515	Choline_transpo	coord: 186..349 e-value: 6.8E-33 score: 114.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..32
None	No IPR available	PANTHER	PTHR11913:SF98	ACTIN DEPOLYMERIZING FACTOR 5-RELATED	coord: 479..631
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 494..629
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 479..631
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 498..630 e-value: 1.56352E-57 score: 188.149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g03020.1	Cp4.1LG16g03020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003779	actin binding
molecular_function	GO:0022857	transmembrane transporter activity