Cp4.1LG16g03000 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g03000
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Signal sequence receptor subunit alpha
Location	Cp4.1LG16: 4933922 .. 4937878 (+)
RNA-Seq Expression	Cp4.1LG16g03000
Synteny	Cp4.1LG16g03000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAGTAAAAAATAAAATTGACCATTTTTTGGTTATCTAAATTGGCTCAACAAACTAGAGGCAATCAGGTAATTGCCCGGGAAGCGGGATTTGACCCGAGAAACGCATTCCTCCTCCCGCTGTTCACCGATTTCTTCCTCAAGAAACGCATTCAGGCTACGGCAGTCTTCAGAGCTCTCAATCATGGCGTCGAAGGCCTTCAGGATTTTCTTTCTTGCACTCCTTCTCCTTGCGTCGCCTTTTCTCCAAGGTTTTGCTTCCTCAATTCTGTATCTAGATTTCTTCTTGCATCTGCATGTGTTTAAACTGTTTGCTCTAGATTTAATCGAATTTCGCTCTCGCATTCATGGTTACGGTTTTAATGTTCCATTTATTGAAATCCGCTTCAATATGCATTTCTCTCTTTGTCTATTATTGCGTTTGGTGCTAGAGCTGCGCCGATTTTCGGTTGGATCTTGTGCGTGTTAGATTTGTTAATTTCCTGCTATAATCTTCCCGGTATTTTTTTTTTTTCAATATTTATATGCTGGTCGATAGCCTCTGTGACTCTTCGACTCGGTTTATACTTGATTGGAAGATGCACGAAATTGCTTGGGCAGCGTTTTTAGAGCATCCATATCAATTGCATTAATTAAGCTCGATATTTGGGTTAGTTAAGCGGACTCTGATCCACGTGATTCGAACGTTTTCATTGTGGTTAAATGCTGGCTTTTTGTCGTTCCTCAGTTGAAGTTGTTATCCATCTTCCACGATGTGATGAATCTGTATACTTTGCTTCTTCTATTTATATATATAAATATATAAATATTTCGTTTTTTTCTTCTTCTTAAGTTGTTAGATGTCAATCGGATGCGGATGTGGAATCTGGAGAGTCCGTTGAAGATGCCACTGACTTAGGGATCGTTGGGGATGAGCAAGATTTCGGCGACGCGAGCTTCAGCCCAGCTACAGGGGTTGATACCGTGTGTGTTTTCCCCAAAAATAGCGCACGTAGTGAGTATTCCATCTAATTTGAACAGAAATATATTCTTTTTGATATGATGCAAATAGTGAATTACATTAAAATTTCTCCAAATGCAGTTGTGGTGGCCGGAGAAGAGACCGAACTTTTAGCAGGAATGAAGAACGATGGTAATTAACCCTTACCTGTCAACTACAAGAGCTGTATTGTCGTTATTTGTATATAATCTGCATCAGTTGGCAATTTAATAATTCACAGCCTTAAGTGGTTTTATTGTAGCGAAAATTCACCGACAATGCACGATTTCCAGTTTGTGTTTCTTACTGTTCTTCCAATTTGTGCATTGTTTAACTTTTTTCTCTCTCTGTTTTCTATGTTCTACCTTTTTCGTAAGAACTTTTTGTTTGTAATTTTGTGGGTTACTAAGATTTGGGTGCGAAAAAAGCATTGAGGTGGCCCTTATCGATACCTCAATCTGCAATTTGAAAATTTTCTTTAATGTTTTCCTTCACGTAGTCTCAGTGATGGAGTTTCCTGCTGTTTTCCTTTTTTTCTTTTTTAATTGCTGCTAGTTGTCTGCTGTGCTTATTATTTTGTTTTTTTCCCCTTTTTTGGTGAAAAAACAGGGGATTCTAGCTTGAATGTCATTGCAATCAAGGCCAGTGTTCATTACACTTTTGATCACCGAATACTGATTCAAAATCTTTCCGTACAGGTATGTGACTGATAGTTAATGTGTACAAGTTTTTTTTTCATCAATTCACTGCATAACCTTTATTTGGTTGCCATATGCAAGTATAATTTTGTGCCAAGAATATTCCAGAATGTTTACTCACCTGGTTCAAGTATTCATGTTGTAGCAATCATTTACCTATTTTGTATATTTGGGGGATGAATTCTTGATTCAGTTAAAGCTGTGAGATATGAGCTAAATTTCTGAAAGCAGCTCATCTTAGCTCTTGGACGCTGGTGCCTGCTTTAGCTTATTACTATTGGAGTCCGTAATATAAATCACCTTGCTTGAGCTCAGACGCCTAGGAGGAGATGGTGTTGCTGTTTGACCTATTAAAATTTAACATACATTTACAGTAATCAGCCGTTGCATAAACTCTATACAAAAAACAGCTACCAAATAAATTAAAAATAAATGTACGTCTAAGGCCAAGGAAAGTGAATCCTAGCCACCAAAAGACTAAAATAACTATTATAATTACAGAACTTATGTATAGCAGGCTGGTTTTAATACCAAAAGGTTTCTTATAAGAAACAATGCTGTGTTGATGTATCACATCCATATATATTTCCAATATTATATATTCTAGTCCATGAAATTTTATGGAGATTTTGGCTGCCATCCTTGGTGGTGTTAATCATTTCAAAAGTGAGATTTATTCTCACACTATATTTTTGTATTTTTCTAGGAGTTTTTATTCGCACTTATCTTCAGTTTTTTATGCTTTAAAGAGGCAGACAAGTAATGTCTTGTTTCTCTTTTTCGAAGAATTTCTTAAGTGCCTGTATGTATACATTACTTGCTACAGCGTTTTGCATCTAGTCAATTCCCTTCTGTTATTTTCTTACAATTTATGTTTATGTTTTGGTTCCAGGGTTTTAACAATGCATCGGTACAAGCATCGACACAAGCAACTTTCCCGTACTTTTTTGTTGTCAGCAAATATCTTCAGGTTTTTGTGATATGATGGTCTTCTACATTGAAATTAAATTTATTGTTTTCTAGATTATTGCTCCGTTGCCTGTGTTTTTAAACTGTAAGTATAAGAATGCATAAATGGCTAAAAAGACATTGCTTCTCTTTGTACAGCCTGGAAATTTTGATCTGGTTGGAACCATTATTTATGAAATAGATCAGCATCCATATCAAAGTACCTTCTTCAATGGTACCATTGAAGTTGTTGAAGCTGGTGGTTTTCTCAGCACTGAATCTGTATTCCTAGTTACCCTTGGAGCTGCACTTATCGTTCTATTTGGTTTGTGGATTCATGGTCAAATACAGAATCTTTCCAAGGTACACAAGCTAAAACTGAATTTTTGGATGATTTGTTTTACTTTCAGGGAGAAAATGTTAAAAATCTGTGCTATGAAGATTCATAACCATCATACCTGTGGTGAATTATGTTTAACGACCAAAAAAAAAAAAAAAAAAAANAGAAAAACAAAATAACTATCTAATGTGTTCAGTAACTCTGCTAAATCATAGGTTGCTTGGGTAATTTTAAGGAAGTGCCCTTATGGGTTTTTCCTTGATTAATTGTAATTTCTCTTTAAAAACAACTTATTCTTGCTGATTGGAAAATATTTTTGCAAATTAGTTGGGTATTGAATGTTTTTAGTGGTGCATTTAACTTTCCGTATATATCCTTGAACACCCCCACCCCAATCAATCTTATAATATTTTTTTTTATTTGATTAGAAAACAAAGAGGGCTCCTAAGGTTGAAGTTGGAACCAGGGCCTCAGATGCATCATTAGACGAATGGCTCGAGGTAAGTTCATTGACCTGTAATTAAATTTGAAGTCGTTTGGTTTCGCCCCCCTTGCTGACTTTGACTGATATTAATCTTATCTTTGGTAATACAGGGTACTGCATATTCTCAATCATCGTCAAACAAATCAAAGAAAAAGAAGTAGATCACACATGTTTTCTGCCTTCACTTTTCCTTGCTGACACATACCAGATACGCAGTCTCTTGTTAACTCACACTTCCGGCATTTGAATTGTTTAAGAGACACACCATGATATCAGTTTTGGAAAAATAGGCCAGTTTAGACTTTTGGAAAAGTTGAGTTATTTCAAATTTGAACTGATGCAGATACGTATAGAAACAATAGATATCTTTTAATTTAATCCAAAATTTTGAGCATTTACCTTTTGCTGTTGAAGTTACTTTTTGATGGATAAATTTTCTACTTGATAGGTCTGCGAG

mRNA sequence

TTTTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAGTAAAAAATAAAATTGACCATTTTTTGGTTATCTAAATTGGCTCAACAAACTAGAGGCAATCAGGTAATTGCCCGGGAAGCGGGATTTGACCCGAGAAACGCATTCCTCCTCCCGCTGTTCACCGATTTCTTCCTCAAGAAACGCATTCAGGCTACGGCAGTCTTCAGAGCTCTCAATCATGGCGTCGAAGGCCTTCAGGATTTTCTTTCTTGCACTCCTTCTCCTTGCGTCGCCTTTTCTCCAAGTTGTTAGATGTCAATCGGATGCGGATGTGGAATCTGGAGAGTCCGTTGAAGATGCCACTGACTTAGGGATCGTTGGGGATGAGCAAGATTTCGGCGACGCGAGCTTCAGCCCAGCTACAGGGGTTGATACCGTGTGTGTTTTCCCCAAAAATAGCGCACGTATTGTGGTGGCCGGAGAAGAGACCGAACTTTTAGCAGGAATGAAGAACGATGGGGATTCTAGCTTGAATGTCATTGCAATCAAGGCCAGTGTTCATTACACTTTTGATCACCGAATACTGATTCAAAATCTTTCCGTACAGGGTTTTAACAATGCATCGGTACAAGCATCGACACAAGCAACTTTCCCGTACTTTTTTGTTGTCAGCAAATATCTTCAGCCTGGAAATTTTGATCTGGTTGGAACCATTATTTATGAAATAGATCAGCATCCATATCAAAGTACCTTCTTCAATGGTACCATTGAAGTTGTTGAAGCTGGTGGTTTTCTCAGCACTGAATCTGTATTCCTAGTTACCCTTGGAGCTGCACTTATCGTTCTATTTGGTTTGTGGATTCATGGTCAAATACAGAATCTTTCCAAGAAAACAAAGAGGGCTCCTAAGGTTGAAGTTGGAACCAGGGCCTCAGATGCATCATTAGACGAATGGCTCGAGGGTACTGCATATTCTCAATCATCGTCAAACAAATCAAAGAAAAAGAAGTAGATCACACATGTTTTCTGCCTTCACTTTTCCTTGCTGACACATACCAGATACGCAGTCTCTTGTTAACTCACACTTCCGGCATTTGAATTGTTTAAGAGACACACCATGATATCAGTTTTGGAAAAATAGGCCAGTTTAGACTTTTGGAAAAGTTGAGTTATTTCAAATTTGAACTGATGCAGATACGTATAGAAACAATAGATATCTTTTAATTTAATCCAAAATTTTGAGCATTTACCTTTTGCTGTTGAAGTTACTTTTTGATGGATAAATTTTCTACTTGATAGGTCTGCGAG

Coding sequence (CDS)

ATGGCGTCGAAGGCCTTCAGGATTTTCTTTCTTGCACTCCTTCTCCTTGCGTCGCCTTTTCTCCAAGTTGTTAGATGTCAATCGGATGCGGATGTGGAATCTGGAGAGTCCGTTGAAGATGCCACTGACTTAGGGATCGTTGGGGATGAGCAAGATTTCGGCGACGCGAGCTTCAGCCCAGCTACAGGGGTTGATACCGTGTGTGTTTTCCCCAAAAATAGCGCACGTATTGTGGTGGCCGGAGAAGAGACCGAACTTTTAGCAGGAATGAAGAACGATGGGGATTCTAGCTTGAATGTCATTGCAATCAAGGCCAGTGTTCATTACACTTTTGATCACCGAATACTGATTCAAAATCTTTCCGTACAGGGTTTTAACAATGCATCGGTACAAGCATCGACACAAGCAACTTTCCCGTACTTTTTTGTTGTCAGCAAATATCTTCAGCCTGGAAATTTTGATCTGGTTGGAACCATTATTTATGAAATAGATCAGCATCCATATCAAAGTACCTTCTTCAATGGTACCATTGAAGTTGTTGAAGCTGGTGGTTTTCTCAGCACTGAATCTGTATTCCTAGTTACCCTTGGAGCTGCACTTATCGTTCTATTTGGTTTGTGGATTCATGGTCAAATACAGAATCTTTCCAAGAAAACAAAGAGGGCTCCTAAGGTTGAAGTTGGAACCAGGGCCTCAGATGCATCATTAGACGAATGGCTCGAGGGTACTGCATATTCTCAATCATCGTCAAACAAATCAAAGAAAAAGAAGTAG

Protein sequence

MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSPATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNLSVQGFNNASVQASTQATFPYFFVVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVVEAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWLEGTAYSQSSSNKSKKKK

Homology

[Close]

BLAST of Cp4.1LG16g03000 vs. ExPASy Swiss-Prot
Match: P45434 (Translocon-associated protein subunit alpha OS=Arabidopsis thaliana OX=3702 GN=At2g21160 PE=2 SV=3)

HSP 1 Score: 295.0 bits (754), Expect = 8.0e-79
Identity = 152/254 (59.84%), Postives = 195/254 (76.77%), Query Frame = 0


Query: 7   RIFFLALLLLASPFLQVVRCQSDADVESG---ESVEDATDLGIVGDEQDFGDASFSPATG 66
           R+ FLALLLLASP LQV RCQSDA+  S    + V + TD  +  D+ D  D + S   G
Sbjct: 5   RVLFLALLLLASPLLQVARCQSDAEDHSSLVDDVVGENTDDAVEEDDHDL-DMNLSSFPG 64

Query: 67  VDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNLSVQ 126
           V+TVCVFPKNSA++V AGEETELL G+KN+G + + V+ I+ASVH  +DH++L+QNL++ 
Sbjct: 65  VETVCVFPKNSAKLVPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTML 124

Query: 127 GFNNASVQASTQATFPYFFVVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVVEAG 186
             NNAS+  S QATFPY F VS+YLQPG FDLVG IIY+++  PYQS F+NGTIEVVE+G
Sbjct: 125 RLNNASIPTSLQATFPYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVESG 184

Query: 187 GFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWLEGT 246
           G LS ESVFL+TLG  L++L GLW + Q+Q L+KKTK+  KVEVGTR+++ASLDEWLEGT
Sbjct: 185 GLLSGESVFLLTLGIGLLLLLGLWAYSQVQRLTKKTKKVSKVEVGTRSTEASLDEWLEGT 244

Query: 247 AYSQSSSNKSKKKK 258
             +++SS K+K KK
Sbjct: 245 TLAKTSSGKTKNKK 257

[Close]

BLAST of Cp4.1LG16g03000 vs. ExPASy Swiss-Prot
Match: Q54R45 (Translocon-associated protein subunit alpha OS=Dictyostelium discoideum OX=44689 GN=ssr1 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.6e-18
Identity = 75/250 (30.00%), Postives = 117/250 (46.80%), Query Frame = 0


Query: 13  LLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSPATGVDTVCVFPK 72
           L+ L    L ++ C    DVE            I  DE        +P + V    +FP 
Sbjct: 4   LITLLLAVLMIISCVYSDDVE------------ITDDEV----VQATPTSDVSFSYIFPD 63

Query: 73  NSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNLSVQGFNNASVQA 132
           N  +   AG   E+L G  N+ D +LN+  I AS+++  D  + IQN + +G    +V+ 
Sbjct: 64  NQDKNFAAGSVVEVLVGFTNNADKALNITHIFASLNHPQDFSVFIQNYT-RGDFGIAVEK 123

Query: 133 STQATFPYFFVVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVVEAGGFLSTESVF 192
              AT  Y FV S+YL+P  F L+ ++ Y+     +  TFFN TI + E       +S F
Sbjct: 124 GHHATLAYRFVPSEYLEPREFGLLISLEYQDGAQNFTQTFFNSTINITEKETSFDMDSFF 183

Query: 193 LVTLGAALIVLFGLWIHG------QIQNLSKKTKRAPKVEVGTRASDASLDEWLEGTAYS 252
           L+ LG   +   G  ++G      +++ +SK  K A +VE     ++    EWL GT+ +
Sbjct: 184 LILLGLGFVGGIGYIVYGKMPKQKKVRTVSKVNKNAVRVE-----TEDETAEWLSGTS-A 230

Query: 253 QSSSNKSKKK 257
            SS  KS +K
Sbjct: 244 ASSKVKSVQK 230

[Close]

BLAST of Cp4.1LG16g03000 vs. NCBI nr
Match: XP_023512742.1 (translocon-associated protein subunit alpha-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 490 bits (1262), Expect = 2.17e-174
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP 60
           MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP
Sbjct: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP 60

Query: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120
           ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL
Sbjct: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120

Query: 121 SVQGFNNASVQASTQATFPYFFVVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180
           SVQGFNNASVQASTQATFPYFFVVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV
Sbjct: 121 SVQGFNNASVQASTQATFPYFFVVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180

Query: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240
           EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL
Sbjct: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240

Query: 241 EGTAYSQSSSNKSKKKK 257
           EGTAYSQSSSNKSKKKK
Sbjct: 241 EGTAYSQSSSNKSKKKK 257

[Close]

BLAST of Cp4.1LG16g03000 vs. NCBI nr
Match: XP_022944553.1 (translocon-associated protein subunit alpha-like [Cucurbita moschata] >KAG6571038.1 Translocon-associated protein subunit alpha, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 489 bits (1258), Expect = 8.85e-174
Identity = 256/257 (99.61%), Postives = 256/257 (99.61%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP 60
           MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP
Sbjct: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP 60

Query: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120
           ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL
Sbjct: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120

Query: 121 SVQGFNNASVQASTQATFPYFFVVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180
           SVQGFNNASVQASTQATFPYFF VSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV
Sbjct: 121 SVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180

Query: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240
           EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL
Sbjct: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240

Query: 241 EGTAYSQSSSNKSKKKK 257
           EGTAYSQSSSNKSKKKK
Sbjct: 241 EGTAYSQSSSNKSKKKK 257

[Close]

BLAST of Cp4.1LG16g03000 vs. NCBI nr
Match: XP_022987011.1 (translocon-associated protein subunit alpha-like [Cucurbita maxima])

HSP 1 Score: 483 bits (1244), Expect = 1.21e-171
Identity = 253/257 (98.44%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP 60
           MASKAFRIFFLALLLLASPFLQVVRCQSDADVES +SVEDATDLGI+GDEQDFGDASFSP
Sbjct: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESVKSVEDATDLGIIGDEQDFGDASFSP 60

Query: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120
           ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL
Sbjct: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120

Query: 121 SVQGFNNASVQASTQATFPYFFVVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180
           SVQGFNNASVQASTQATFPYFF VSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV
Sbjct: 121 SVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180

Query: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240
           EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL
Sbjct: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240

Query: 241 EGTAYSQSSSNKSKKKK 257
           EGTAYSQSSSNKSKKKK
Sbjct: 241 EGTAYSQSSSNKSKKKK 257

[Close]

BLAST of Cp4.1LG16g03000 vs. NCBI nr
Match: XP_022146235.1 (translocon-associated protein subunit alpha [Momordica charantia])

HSP 1 Score: 442 bits (1137), Expect = 2.53e-155
Identity = 233/258 (90.31%), Postives = 243/258 (94.19%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVG-DEQDFGDASFS 60
           MASKAFRI FLALLLLASP LQVVRCQSDADVE  ++VED TDLGIVG DEQD+GD SFS
Sbjct: 1   MASKAFRILFLALLLLASPVLQVVRCQSDADVEYEDAVEDVTDLGIVGEDEQDYGDGSFS 60

Query: 61  PATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQN 120
           PA GVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHR++IQN
Sbjct: 61  PAQGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRVVIQN 120

Query: 121 LSVQGFNNASVQASTQATFPYFFVVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEV 180
           LS QGFNNASV AS+QATFPYFF VS++LQ GNFDLVGTIIYEIDQHPYQSTFFNGTIEV
Sbjct: 121 LSAQGFNNASVPASSQATFPYFFGVSRFLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEV 180

Query: 181 VEAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEW 240
           VEAGGFLS ESVFLVTLG ALIVL GLWIHGQIQNLSKKTKRAPKVEVGT++SDASLDEW
Sbjct: 181 VEAGGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEW 240

Query: 241 LEGTAYSQSSSNKSKKKK 257
           LEGTAYSQSSSNKSKKKK
Sbjct: 241 LEGTAYSQSSSNKSKKKK 258

[Close]

BLAST of Cp4.1LG16g03000 vs. NCBI nr
Match: XP_022946984.1 (translocon-associated protein subunit alpha-like [Cucurbita moschata] >KAG7035036.1 Translocon-associated protein subunit alpha [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 436 bits (1121), Expect = 6.94e-153
Identity = 229/258 (88.76%), Postives = 239/258 (92.64%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVG-DEQDFGDASFS 60
           MASKA+RIFF ALLLLASPFLQVVRCQSDA VES E+V+D TDLG VG DEQDFGD SFS
Sbjct: 1   MASKAYRIFFFALLLLASPFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS 60

Query: 61  PATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQN 120
           PA GVDTVCVFPKNSARIVVAGEE ELLAG+KNDGDSSLNVIAIKASVHYTFDHR+LIQN
Sbjct: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120

Query: 121 LSVQGFNNASVQASTQATFPYFFVVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEV 180
           L+ Q FNNASV AS+QATFPYFF VSKYLQPGNFDLVGTIIYE+DQHPYQSTFFNGTIEV
Sbjct: 121 LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV 180

Query: 181 VEAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEW 240
            EA GFLS ESVFLVTLG AL+VL GLWIHGQIQNLSKKTKRAPKVEVGT+ASDASLDEW
Sbjct: 181 AEASGFLSIESVFLVTLGIALMVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW 240

Query: 241 LEGTAYSQSSSNKSKKKK 257
           LEGTAYSQSSSNK KKKK
Sbjct: 241 LEGTAYSQSSSNKLKKKK 258

[Close]

BLAST of Cp4.1LG16g03000 vs. ExPASy TrEMBL
Match: A0A6J1FY56 (Signal sequence receptor subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC111448970 PE=3 SV=1)

HSP 1 Score: 489 bits (1258), Expect = 4.29e-174
Identity = 256/257 (99.61%), Postives = 256/257 (99.61%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP 60
           MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP
Sbjct: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP 60

Query: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120
           ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL
Sbjct: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120

Query: 121 SVQGFNNASVQASTQATFPYFFVVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180
           SVQGFNNASVQASTQATFPYFF VSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV
Sbjct: 121 SVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180

Query: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240
           EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL
Sbjct: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240

Query: 241 EGTAYSQSSSNKSKKKK 257
           EGTAYSQSSSNKSKKKK
Sbjct: 241 EGTAYSQSSSNKSKKKK 257

[Close]

BLAST of Cp4.1LG16g03000 vs. ExPASy TrEMBL
Match: A0A6J1JCX1 (Signal sequence receptor subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC111484586 PE=3 SV=1)

HSP 1 Score: 483 bits (1244), Expect = 5.84e-172
Identity = 253/257 (98.44%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP 60
           MASKAFRIFFLALLLLASPFLQVVRCQSDADVES +SVEDATDLGI+GDEQDFGDASFSP
Sbjct: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESVKSVEDATDLGIIGDEQDFGDASFSP 60

Query: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120
           ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL
Sbjct: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120

Query: 121 SVQGFNNASVQASTQATFPYFFVVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180
           SVQGFNNASVQASTQATFPYFF VSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV
Sbjct: 121 SVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180

Query: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240
           EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL
Sbjct: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240

Query: 241 EGTAYSQSSSNKSKKKK 257
           EGTAYSQSSSNKSKKKK
Sbjct: 241 EGTAYSQSSSNKSKKKK 257

[Close]

BLAST of Cp4.1LG16g03000 vs. ExPASy TrEMBL
Match: A0A6J1CWQ9 (Signal sequence receptor subunit alpha OS=Momordica charantia OX=3673 GN=LOC111015499 PE=3 SV=1)

HSP 1 Score: 442 bits (1137), Expect = 1.23e-155
Identity = 233/258 (90.31%), Postives = 243/258 (94.19%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVG-DEQDFGDASFS 60
           MASKAFRI FLALLLLASP LQVVRCQSDADVE  ++VED TDLGIVG DEQD+GD SFS
Sbjct: 1   MASKAFRILFLALLLLASPVLQVVRCQSDADVEYEDAVEDVTDLGIVGEDEQDYGDGSFS 60

Query: 61  PATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQN 120
           PA GVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHR++IQN
Sbjct: 61  PAQGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRVVIQN 120

Query: 121 LSVQGFNNASVQASTQATFPYFFVVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEV 180
           LS QGFNNASV AS+QATFPYFF VS++LQ GNFDLVGTIIYEIDQHPYQSTFFNGTIEV
Sbjct: 121 LSAQGFNNASVPASSQATFPYFFGVSRFLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEV 180

Query: 181 VEAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEW 240
           VEAGGFLS ESVFLVTLG ALIVL GLWIHGQIQNLSKKTKRAPKVEVGT++SDASLDEW
Sbjct: 181 VEAGGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEW 240

Query: 241 LEGTAYSQSSSNKSKKKK 257
           LEGTAYSQSSSNKSKKKK
Sbjct: 241 LEGTAYSQSSSNKSKKKK 258

[Close]

BLAST of Cp4.1LG16g03000 vs. ExPASy TrEMBL
Match: A0A6J1G5G5 (Signal sequence receptor subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC111451000 PE=3 SV=1)

HSP 1 Score: 436 bits (1121), Expect = 3.36e-153
Identity = 229/258 (88.76%), Postives = 239/258 (92.64%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVG-DEQDFGDASFS 60
           MASKA+RIFF ALLLLASPFLQVVRCQSDA VES E+V+D TDLG VG DEQDFGD SFS
Sbjct: 1   MASKAYRIFFFALLLLASPFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS 60

Query: 61  PATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQN 120
           PA GVDTVCVFPKNSARIVVAGEE ELLAG+KNDGDSSLNVIAIKASVHYTFDHR+LIQN
Sbjct: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120

Query: 121 LSVQGFNNASVQASTQATFPYFFVVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEV 180
           L+ Q FNNASV AS+QATFPYFF VSKYLQPGNFDLVGTIIYE+DQHPYQSTFFNGTIEV
Sbjct: 121 LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV 180

Query: 181 VEAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEW 240
            EA GFLS ESVFLVTLG AL+VL GLWIHGQIQNLSKKTKRAPKVEVGT+ASDASLDEW
Sbjct: 181 AEASGFLSIESVFLVTLGIALMVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW 240

Query: 241 LEGTAYSQSSSNKSKKKK 257
           LEGTAYSQSSSNK KKKK
Sbjct: 241 LEGTAYSQSSSNKLKKKK 258

[Close]

BLAST of Cp4.1LG16g03000 vs. ExPASy TrEMBL
Match: A0A6J1I4Y6 (Signal sequence receptor subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC111469918 PE=3 SV=1)

HSP 1 Score: 428 bits (1101), Expect = 3.74e-150
Identity = 224/258 (86.82%), Postives = 236/258 (91.47%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVG-DEQDFGDASFS 60
           MASKA+RIFF AL LLASPFLQVVRCQSDA VES E+V+D +DLG VG DEQDFGD SFS
Sbjct: 1   MASKAYRIFFFALFLLASPFLQVVRCQSDASVESEEAVKDISDLGTVGEDEQDFGDGSFS 60

Query: 61  PATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQN 120
           PA GVDTVCVFPKNSARIVVAGEE ELLAG+KNDGDSSLNVIAIKASVHYTFDHR+LIQN
Sbjct: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120

Query: 121 LSVQGFNNASVQASTQATFPYFFVVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEV 180
           L+ Q +NNASV AS+QATFPYFF VSKYLQPGNFD+VGTIIYE+DQHPYQSTFFNGTIEV
Sbjct: 121 LTAQPYNNASVPASSQATFPYFFAVSKYLQPGNFDIVGTIIYEMDQHPYQSTFFNGTIEV 180

Query: 181 VEAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEW 240
            EA GFLS ESVFLVTLG ALIVL GLWIHGQIQNL KKTKRAPKVE GT+ASDASLDEW
Sbjct: 181 AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLPKKTKRAPKVEFGTKASDASLDEW 240

Query: 241 LEGTAYSQSSSNKSKKKK 257
           LEGTAYSQSSSNK KKKK
Sbjct: 241 LEGTAYSQSSSNKLKKKK 258

[Close]

BLAST of Cp4.1LG16g03000 vs. TAIR 10
Match: AT2G21160.1 (Translocon-associated protein (TRAP), alpha subunit )

HSP 1 Score: 295.0 bits (754), Expect = 5.7e-80
Identity = 152/254 (59.84%), Postives = 195/254 (76.77%), Query Frame = 0


Query: 7   RIFFLALLLLASPFLQVVRCQSDADVESG---ESVEDATDLGIVGDEQDFGDASFSPATG 66
           R+ FLALLLLASP LQV RCQSDA+  S    + V + TD  +  D+ D  D + S   G
Sbjct: 5   RVLFLALLLLASPLLQVARCQSDAEDHSSLVDDVVGENTDDAVEEDDHDL-DMNLSSFPG 64

Query: 67  VDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNLSVQ 126
           V+TVCVFPKNSA++V AGEETELL G+KN+G + + V+ I+ASVH  +DH++L+QNL++ 
Sbjct: 65  VETVCVFPKNSAKLVPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTML 124

Query: 127 GFNNASVQASTQATFPYFFVVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVVEAG 186
             NNAS+  S QATFPY F VS+YLQPG FDLVG IIY+++  PYQS F+NGTIEVVE+G
Sbjct: 125 RLNNASIPTSLQATFPYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVESG 184

Query: 187 GFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWLEGT 246
           G LS ESVFL+TLG  L++L GLW + Q+Q L+KKTK+  KVEVGTR+++ASLDEWLEGT
Sbjct: 185 GLLSGESVFLLTLGIGLLLLLGLWAYSQVQRLTKKTKKVSKVEVGTRSTEASLDEWLEGT 244

Query: 247 AYSQSSSNKSKKKK 258
             +++SS K+K KK
Sbjct: 245 TLAKTSSGKTKNKK 257

[Close]

BLAST of Cp4.1LG16g03000 vs. TAIR 10
Match: AT2G16595.1 (Translocon-associated protein (TRAP), alpha subunit )

HSP 1 Score: 256.5 bits (654), Expect = 2.2e-68
Identity = 144/257 (56.03%), Postives = 181/257 (70.43%), Query Frame = 0


Query: 5   AFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASF----SP 64
           +FR+ F A LLL SPFL+V  CQSD++ +SG  V D      VG+E+   +  F    + 
Sbjct: 4   SFRLLFFAFLLLVSPFLKVALCQSDSE-DSGFEVSD------VGEEESDAEEVFGLELTS 63

Query: 65  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 124
           A G++T+CVFPKNSA+I+ AG ETELL GMKNDG S+++++A+K S+H  FD    +QNL
Sbjct: 64  APGIETLCVFPKNSAKIIKAGVETELLVGMKNDGQSNVDIVAVKGSLHLPFDQN-AVQNL 123

Query: 125 SVQGFNNASVQASTQATFPYFFVVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 184
           +   F+NASV  S QAT PY F VSK+LQ G FD VGTIIYEID  PYQS F+NGTIEVV
Sbjct: 124 TALSFSNASVPTSAQATLPYAFAVSKFLQAGAFDFVGTIIYEIDGKPYQSIFYNGTIEVV 183

Query: 185 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 244
           E G     ESVFL  L   +I    ++I   +++++KKTKRAPKVEVGT   DAS DEWL
Sbjct: 184 EDGPLFRMESVFLSGLLIFVIAFLAIYIQNVLKHMTKKTKRAPKVEVGTATKDASHDEWL 243

Query: 245 EGTAYSQSSSNKSKKKK 258
           EGT+Y+QSSS KSKKKK
Sbjct: 244 EGTSYTQSSS-KSKKKK 251

[Close]

BLAST of Cp4.1LG16g03000 vs. TAIR 10
Match: AT2G21160.2 (Translocon-associated protein (TRAP), alpha subunit )

HSP 1 Score: 208.4 bits (529), Expect = 7.0e-54
Identity = 108/183 (59.02%), Postives = 137/183 (74.86%), Query Frame = 0


Query: 7   RIFFLALLLLASPFLQVVRCQSDADVESG---ESVEDATDLGIVGDEQDFGDASFSPATG 66
           R+ FLALLLLASP LQV RCQSDA+  S    + V + TD  +  D+ D  D + S   G
Sbjct: 5   RVLFLALLLLASPLLQVARCQSDAEDHSSLVDDVVGENTDDAVEEDDHDL-DMNLSSFPG 64

Query: 67  VDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNLSVQ 126
           V+TVCVFPKNSA++V AGEETELL G+KN+G + + V+ I+ASVH  +DH++L+QNL++ 
Sbjct: 65  VETVCVFPKNSAKLVPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTML 124

Query: 127 GFNNASVQASTQATFPYFFVVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVVEAG 186
             NNAS+  S QATFPY F VS+YLQPG FDLVG IIY+++  PYQS F+NGTIEVVE+G
Sbjct: 125 RLNNASIPTSLQATFPYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVESG 184

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g03000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P45434	8.0e-79	59.84	Translocon-associated protein subunit alpha OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q54R45	1.6e-18	30.00	Translocon-associated protein subunit alpha OS=Dictyostelium discoideum OX=44689...	[more]

BLAST of Cp4.1LG16g03000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512742.1	2.17e-174	100.00	translocon-associated protein subunit alpha-like [Cucurbita pepo subsp. pepo]	[more]
XP_022944553.1	8.85e-174	99.61	translocon-associated protein subunit alpha-like [Cucurbita moschata] >KAG657103...	[more]
XP_022987011.1	1.21e-171	98.44	translocon-associated protein subunit alpha-like [Cucurbita maxima]	[more]
XP_022146235.1	2.53e-155	90.31	translocon-associated protein subunit alpha [Momordica charantia]	[more]
XP_022946984.1	6.94e-153	88.76	translocon-associated protein subunit alpha-like [Cucurbita moschata] >KAG703503...	[more]

BLAST of Cp4.1LG16g03000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FY56	4.29e-174	99.61	Signal sequence receptor subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1JCX1	5.84e-172	98.44	Signal sequence receptor subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC1114845...	[more]
A0A6J1CWQ9	1.23e-155	90.31	Signal sequence receptor subunit alpha OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1G5G5	3.36e-153	88.76	Signal sequence receptor subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1I4Y6	3.74e-150	86.82	Signal sequence receptor subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC1114699...	[more]

BLAST of Cp4.1LG16g03000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21160.1	5.7e-80	59.84	Translocon-associated protein (TRAP), alpha subunit	[more]
AT2G16595.1	2.2e-68	56.03	Translocon-associated protein (TRAP), alpha subunit	[more]
AT2G21160.2	7.0e-54	59.02	Translocon-associated protein (TRAP), alpha subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005595	Translocon-associated protein (TRAP), alpha subunit	PFAM	PF03896	TRAP_alpha	coord: 29..242 e-value: 5.2E-26 score: 91.5
None	No IPR available	PANTHER	PTHR12924	TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT	coord: 5..257
None	No IPR available	PANTHER	PTHR12924:SF5	SUBFAMILY NOT NAMED	coord: 5..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g03000.1	Cp4.1LG16g03000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane