Cp4.1LG16g02890 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g02890
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Auxin-responsive protein
Location	Cp4.1LG16: 4828593 .. 4828925 (-)
RNA-Seq Expression	Cp4.1LG16g02890
Synteny	Cp4.1LG16g02890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATCCAAAAGCTAAACAAACTCCCCCAATCCACCGTCCTCAAGCAAATCCTCAAACGTTGCTCGAGCCTCGGTCGAAAGACCAACAACGCCTGTGCCTACGACGCCGACGACGACCTCCCCCTCGACGTCCCCAAGGGTCATTTCGCCGTCTACGTCGGCGAAAACCGTAGCCGATTCATCGTCCCTATCTCCGTCCTTACTCACCCTGAATTCCAATGCTTACTCCGTCAAGCAGAAGAAGAATTCGGATTCGACCACTACATGGGTCTCACCATCCCTTGTCAAGAACACGTCTTCAGATCCTTAACATCCTCCATGCTTCGATGA

mRNA sequence

ATGGCCATCCAAAAGCTAAACAAACTCCCCCAATCCACCGTCCTCAAGCAAATCCTCAAACGTTGCTCGAGCCTCGGTCGAAAGACCAACAACGCCTGTGCCTACGACGCCGACGACGACCTCCCCCTCGACGTCCCCAAGGGTCATTTCGCCGTCTACGTCGGCGAAAACCGTAGCCGATTCATCGTCCCTATCTCCGTCCTTACTCACCCTGAATTCCAATGCTTACTCCGTCAAGCAGAAGAAGAATTCGGATTCGACCACTACATGGGTCTCACCATCCCTTGTCAAGAACACGTCTTCAGATCCTTAACATCCTCCATGCTTCGATGA

Coding sequence (CDS)

ATGGCCATCCAAAAGCTAAACAAACTCCCCCAATCCACCGTCCTCAAGCAAATCCTCAAACGTTGCTCGAGCCTCGGTCGAAAGACCAACAACGCCTGTGCCTACGACGCCGACGACGACCTCCCCCTCGACGTCCCCAAGGGTCATTTCGCCGTCTACGTCGGCGAAAACCGTAGCCGATTCATCGTCCCTATCTCCGTCCTTACTCACCCTGAATTCCAATGCTTACTCCGTCAAGCAGAAGAAGAATTCGGATTCGACCACTACATGGGTCTCACCATCCCTTGTCAAGAACACGTCTTCAGATCCTTAACATCCTCCATGCTTCGATGA

Protein sequence

MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR

Homology

[Close]

BLAST of Cp4.1LG16g02890 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 6.1e-36
Identity = 76/104 (73.08%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 3   IQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFI 62
           ++K +KL Q+ +LKQILKRCSSLG+K  N   YD +D LPLDVPKGHF VYVGENRSR+I
Sbjct: 4   MKKTSKLTQTAMLKQILKRCSSLGKK--NGGGYD-EDCLPLDVPKGHFPVYVGENRSRYI 63

Query: 63  VPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTS 107
           VPIS LTHPEFQ LL++AEEEFGFDH MGLTIPC E VF++LTS
Sbjct: 64  VPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTS 104

[Close]

BLAST of Cp4.1LG16g02890 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.1e-32
Identity = 72/109 (66.06%), Postives = 82/109 (75.23%), Query Frame = 0


Query: 1   MAIQKLNKL--PQSTVLKQILKRCSSLGRKTN-NACAYDADDDLPLDVPKGHFAVYVGEN 60
           MAI++ +K    Q+  +KQI+KRCSSL +  N N C Y+ +DDLP DVPKGHF VYVG N
Sbjct: 1   MAIKRSSKATSSQAASIKQIVKRCSSLRKMKNVNGCYYNQEDDLPQDVPKGHFPVYVGPN 60

Query: 61  RSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTS 107
           RSR+IVPIS L H EFQ LLR AEEEFGFDH MGLTIPC E  FRSL S
Sbjct: 61  RSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLIS 109

[Close]

BLAST of Cp4.1LG16g02890 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.8e-25
Identity = 57/104 (54.81%), Postives = 73/104 (70.19%), Query Frame = 0


Query: 3   IQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFI 62
           I+K +K  Q+  +K+I+K+CSS G+  +       D  LP DVPKGHF VYVGE R+R+I
Sbjct: 4   IRKSHKQTQALAIKKIIKKCSSFGKNND-------DSGLPNDVPKGHFVVYVGERRNRYI 63

Query: 63  VPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTS 107
           VPIS L HP FQ LL+++EEEFGF+H MG+ IPCQE  F S  S
Sbjct: 64  VPISCLDHPTFQDLLQRSEEEFGFNHDMGIIIPCQEVDFLSFFS 100

[Close]

BLAST of Cp4.1LG16g02890 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.7e-18
Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 0


Query: 43  LDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYM-GLTIPCQEHVF 102
           LD PKG+ AVYVGEN  RF++P+S L  P FQ LL QAEEEFG+DH M GLTIPC E +F
Sbjct: 23  LDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLF 82

Query: 103 RSLTSSM 109
           + +TS +
Sbjct: 83  QHITSCL 89

[Close]

BLAST of Cp4.1LG16g02890 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-17
Identity = 41/66 (62.12%), Postives = 49/66 (74.24%), Query Frame = 0


Query: 44  DVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYM-GLTIPCQEHVFR 103
           D PKG+ AVYVGE   RF++P+S L  P FQ LL QAEEEFG+DH M GLTIPC E VF+
Sbjct: 16  DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQ 75

Query: 104 SLTSSM 109
            +TS +
Sbjct: 76  CITSCL 81

[Close]

BLAST of Cp4.1LG16g02890 vs. NCBI nr
Match: XP_022943433.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022986642.1 auxin-responsive protein SAUR50-like [Cucurbita maxima] >XP_023512605.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo] >KAG6571068.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 229 bits (583), Expect = 1.08e-75
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSR 60
           MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSR
Sbjct: 1   MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSR 60

Query: 61  FIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 110
           FIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR
Sbjct: 61  FIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 110

[Close]

BLAST of Cp4.1LG16g02890 vs. NCBI nr
Match: XP_038900691.1 (auxin-responsive protein SAUR50 [Benincasa hispida])

HSP 1 Score: 209 bits (533), Expect = 4.59e-68
Identity = 101/110 (91.82%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 1   MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSR 60
           MAI K+NKLPQ TVLKQILKRCSSLG+K++N  AYDADDDLPLDVPKGHFAVYVGENRSR
Sbjct: 1   MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNGAYDADDDLPLDVPKGHFAVYVGENRSR 60

Query: 61  FIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 110
           FIVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR
Sbjct: 61  FIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 110

[Close]

BLAST of Cp4.1LG16g02890 vs. NCBI nr
Match: XP_004147005.1 (auxin-responsive protein SAUR50 [Cucumis sativus])

HSP 1 Score: 206 bits (523), Expect = 1.49e-66
Identity = 101/110 (91.82%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 1   MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSR 60
           MAI K NKLPQSTVLKQILKRCSSLG+K+NN  AYDAD++LPLDVPKGHFAVYVGENRSR
Sbjct: 1   MAILKGNKLPQSTVLKQILKRCSSLGKKSNNG-AYDADEELPLDVPKGHFAVYVGENRSR 60

Query: 61  FIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 110
           FIVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR
Sbjct: 61  FIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 109

[Close]

BLAST of Cp4.1LG16g02890 vs. NCBI nr
Match: XP_008457621.1 (PREDICTED: auxin-induced protein 15A [Cucumis melo] >KAA0045663.1 auxin-induced protein 15A [Cucumis melo var. makuwa] >TYJ99620.1 auxin-induced protein 15A [Cucumis melo var. makuwa])

HSP 1 Score: 204 bits (520), Expect = 4.28e-66
Identity = 99/110 (90.00%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 1   MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSR 60
           MAI K+NKLPQ TVLKQILKRCSSLG+K+NN  AYDAD++LPLDVPKGHFAVYVGENRSR
Sbjct: 1   MAILKVNKLPQPTVLKQILKRCSSLGKKSNNG-AYDADEELPLDVPKGHFAVYVGENRSR 60

Query: 61  FIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 110
           +IVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR
Sbjct: 61  YIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 109

[Close]

BLAST of Cp4.1LG16g02890 vs. NCBI nr
Match: XP_022947563.1 (auxin-responsive protein SAUR50 [Cucurbita moschata] >XP_023533952.1 auxin-responsive protein SAUR50 [Cucurbita pepo subsp. pepo] >KAG6605035.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 200 bits (508), Expect = 2.80e-64
Identity = 99/110 (90.00%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSR 60
           MAI+K NKLPQ TVLKQILKRCSSLG+KTNN   YD D+DLP+DVPKGHFAVYVGENRSR
Sbjct: 1   MAIRKANKLPQPTVLKQILKRCSSLGKKTNNG-GYD-DNDLPVDVPKGHFAVYVGENRSR 60

Query: 61  FIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 110
           FIVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR
Sbjct: 61  FIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 108

[Close]

BLAST of Cp4.1LG16g02890 vs. ExPASy TrEMBL
Match: A0A6J1J850 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111484320 PE=3 SV=1)

HSP 1 Score: 229 bits (583), Expect = 5.23e-76
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSR 60
           MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSR
Sbjct: 1   MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSR 60

Query: 61  FIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 110
           FIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR
Sbjct: 61  FIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 110

[Close]

BLAST of Cp4.1LG16g02890 vs. ExPASy TrEMBL
Match: A0A6J1FWX1 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111448199 PE=3 SV=1)

HSP 1 Score: 229 bits (583), Expect = 5.23e-76
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSR 60
           MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSR
Sbjct: 1   MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSR 60

Query: 61  FIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 110
           FIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR
Sbjct: 61  FIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 110

[Close]

BLAST of Cp4.1LG16g02890 vs. ExPASy TrEMBL
Match: A0A5D3BIH0 (Auxin-induced protein 15A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001940 PE=3 SV=1)

HSP 1 Score: 204 bits (520), Expect = 2.07e-66
Identity = 99/110 (90.00%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 1   MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSR 60
           MAI K+NKLPQ TVLKQILKRCSSLG+K+NN  AYDAD++LPLDVPKGHFAVYVGENRSR
Sbjct: 1   MAILKVNKLPQPTVLKQILKRCSSLGKKSNNG-AYDADEELPLDVPKGHFAVYVGENRSR 60

Query: 61  FIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 110
           +IVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR
Sbjct: 61  YIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 109

[Close]

BLAST of Cp4.1LG16g02890 vs. ExPASy TrEMBL
Match: A0A1S3C616 (auxin-induced protein 15A OS=Cucumis melo OX=3656 GN=LOC103497271 PE=3 SV=1)

HSP 1 Score: 204 bits (520), Expect = 2.07e-66
Identity = 99/110 (90.00%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 1   MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSR 60
           MAI K+NKLPQ TVLKQILKRCSSLG+K+NN  AYDAD++LPLDVPKGHFAVYVGENRSR
Sbjct: 1   MAILKVNKLPQPTVLKQILKRCSSLGKKSNNG-AYDADEELPLDVPKGHFAVYVGENRSR 60

Query: 61  FIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 110
           +IVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR
Sbjct: 61  YIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 109

[Close]

BLAST of Cp4.1LG16g02890 vs. ExPASy TrEMBL
Match: A0A0A0LJ77 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258100 PE=3 SV=1)

HSP 1 Score: 206 bits (523), Expect = 7.54e-66
Identity = 101/110 (91.82%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 1   MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSR 60
           MAI K NKLPQSTVLKQILKRCSSLG+K+NN  AYDAD++LPLDVPKGHFAVYVGENRSR
Sbjct: 73  MAILKGNKLPQSTVLKQILKRCSSLGKKSNNG-AYDADEELPLDVPKGHFAVYVGENRSR 132

Query: 61  FIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 110
           FIVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR
Sbjct: 133 FIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 181

[Close]

BLAST of Cp4.1LG16g02890 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 152.5 bits (384), Expect = 1.9e-37
Identity = 77/110 (70.00%), Postives = 91/110 (82.73%), Query Frame = 0


Query: 1   MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSR 60
           MA++K NKL Q+ ++KQILKRCSSLG+K +N    D ++  PL+VPKGHF VYVGENR R
Sbjct: 1   MAMKKANKLTQTAMIKQILKRCSSLGKKQSNVYGED-ENGSPLNVPKGHFVVYVGENRVR 60

Query: 61  FIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 111
           ++VPIS LT PEFQ LL+QAEEEFGFDH MGLTIPC+E VFRSLT SMLR
Sbjct: 61  YVVPISFLTRPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSLT-SMLR 108

[Close]

BLAST of Cp4.1LG16g02890 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 151.4 bits (381), Expect = 4.3e-37
Identity = 76/104 (73.08%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 3   IQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFI 62
           ++K +KL Q+ +LKQILKRCSSLG+K  N   YD +D LPLDVPKGHF VYVGENRSR+I
Sbjct: 4   MKKTSKLTQTAMLKQILKRCSSLGKK--NGGGYD-EDCLPLDVPKGHFPVYVGENRSRYI 63

Query: 63  VPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTS 107
           VPIS LTHPEFQ LL++AEEEFGFDH MGLTIPC E VF++LTS
Sbjct: 64  VPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTS 104

[Close]

BLAST of Cp4.1LG16g02890 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 146.4 bits (368), Expect = 1.4e-35
Identity = 74/106 (69.81%), Postives = 89/106 (83.96%), Query Frame = 0


Query: 1   MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSR 60
           MA+++ +KL Q+ +LKQILKRCSSL +   N C YD +D LP+DVPKGHF VYVGE RSR
Sbjct: 1   MAVKRSSKLTQTAMLKQILKRCSSLAK---NQC-YD-EDGLPVDVPKGHFPVYVGEKRSR 60

Query: 61  FIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTS 107
           +IVPIS LTHP+F+ LL+QAEEEFGF+H MGLTIPC+E VFRSLTS
Sbjct: 61  YIVPISFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTS 101

[Close]

BLAST of Cp4.1LG16g02890 vs. TAIR 10
Match: AT1G19830.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 146.0 bits (367), Expect = 1.8e-35
Identity = 74/114 (64.91%), Postives = 89/114 (78.07%), Query Frame = 0


Query: 1   MAIQKLNKLPQSTVLKQILKRCSSLGRKT----NNACAYDADDDLPLDVPKGHFAVYVGE 60
           MAI   +KL Q+T++KQILKRCSSLG+K     N+   +D  D LPLDVPKGHF VYVG 
Sbjct: 1   MAIINRSKLTQTTMIKQILKRCSSLGKKQSSEYNDTHEHDG-DSLPLDVPKGHFVVYVGG 60

Query: 61  NRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR 111
           NR R+++PIS LT PEFQ LL+QAEEEFGFDH MGLTIPC+E  F+SL +SML+
Sbjct: 61  NRVRYVLPISFLTRPEFQLLLQQAEEEFGFDHNMGLTIPCEEVAFKSLITSMLQ 113

[Close]

BLAST of Cp4.1LG16g02890 vs. TAIR 10
Match: AT2G16580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 142.1 bits (357), Expect = 2.6e-34
Identity = 71/104 (68.27%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 3   IQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFI 62
           ++K  KL Q+ +L+QILKRCSSLG+K N    Y+ + DLPLDVPKGHF VYVG NRSR+I
Sbjct: 4   LKKSTKLAQTAMLRQILKRCSSLGKK-NGGGGYE-EVDLPLDVPKGHFPVYVGHNRSRYI 63

Query: 63  VPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTS 107
           VPIS LT+ +FQCLLR+AEEEFGFDH MGLTIPC E  F+ LTS
Sbjct: 64  VPISFLTNLDFQCLLRRAEEEFGFDHDMGLTIPCDELFFQDLTS 105

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g02890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	6.1e-36	73.08	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9SL45	4.1e-32	66.06	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P0DKL1	2.8e-25	54.81	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
P32295	5.7e-18	62.69	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
P33081	1.3e-17	62.12	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of Cp4.1LG16g02890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943433.1	1.08e-75	100.00	auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022986642.1 auxin-...	[more]
XP_038900691.1	4.59e-68	91.82	auxin-responsive protein SAUR50 [Benincasa hispida]	[more]
XP_004147005.1	1.49e-66	91.82	auxin-responsive protein SAUR50 [Cucumis sativus]	[more]
XP_008457621.1	4.28e-66	90.00	PREDICTED: auxin-induced protein 15A [Cucumis melo] >KAA0045663.1 auxin-induced ...	[more]
XP_022947563.1	2.80e-64	90.00	auxin-responsive protein SAUR50 [Cucurbita moschata] >XP_023533952.1 auxin-respo...	[more]

BLAST of Cp4.1LG16g02890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J850	5.23e-76	100.00	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111484320...	[more]
A0A6J1FWX1	5.23e-76	100.00	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114481...	[more]
A0A5D3BIH0	2.07e-66	90.00	Auxin-induced protein 15A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3C616	2.07e-66	90.00	auxin-induced protein 15A OS=Cucumis melo OX=3656 GN=LOC103497271 PE=3 SV=1	[more]
A0A0A0LJ77	7.54e-66	91.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258100 PE=3 SV=1	[more]

BLAST of Cp4.1LG16g02890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75580.1	1.9e-37	70.00	SAUR-like auxin-responsive protein family	[more]
AT4G34760.1	4.3e-37	73.08	SAUR-like auxin-responsive protein family	[more]
AT2G21220.1	1.4e-35	69.81	SAUR-like auxin-responsive protein family	[more]
AT1G19830.1	1.8e-35	64.91	SAUR-like auxin-responsive protein family	[more]
AT2G16580.1	2.6e-34	68.27	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 19..107 e-value: 9.6E-28 score: 96.2
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 6..110
None	No IPR available	PANTHER	PTHR31374:SF311	SMALL AUXIN-UP RNA-RELATED	coord: 6..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g02890.1	Cp4.1LG16g02890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin