Cp4.1LG16g02840 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTATTGCTATGGCTGTAAACCTCGCCCTTCCGGTCCACTCCCCGGACCTGTCCTTCTGCTTCTCGCCGTAGTCTTCATCTTGATCGGATTGTCCTCTCTGTTCCCCTCAGAACCAATCGATTTCTCGGAATTCCAAATCAATTGGCCTCTTCTTGCCGTTCCGATTATTTTACTCGTTCTTGTTCGCTGTTTGTCGTCCGTGGATTCTTCATCCAGGTACTATGCCTGCCCTTGCAATCGCGGCTGGAAGATGCAGTGTCGGTGCGGCCATGGCGCATGGTAA ATGACTTATTGCTATGGCTGTAAACCTCGCCCTTCCGGTCCACTCCCCGGACCTGTCCTTCTGCTTCTCGCCGTAGTCTTCATCTTGATCGGATTGTCCTCTCTGTTCCCCTCAGAACCAATCGATTTCTCGGAATTCCAAATCAATTGGCCTCTTCTTGCCGTTCCGATTATTTTACTCGTTCTTGTTCGCTGTTTGTCGTCCGTGGATTCTTCATCCAGGTACTATGCCTGCCCTTGCAATCGCGGCTGGAAGATGCAGTGTCGGTGCGGCCATGGCGCATGGTAA ATGACTTATTGCTATGGCTGTAAACCTCGCCCTTCCGGTCCACTCCCCGGACCTGTCCTTCTGCTTCTCGCCGTAGTCTTCATCTTGATCGGATTGTCCTCTCTGTTCCCCTCAGAACCAATCGATTTCTCGGAATTCCAAATCAATTGGCCTCTTCTTGCCGTTCCGATTATTTTACTCGTTCTTGTTCGCTGTTTGTCGTCCGTGGATTCTTCATCCAGGTACTATGCCTGCCCTTGCAATCGCGGCTGGAAGATGCAGTGTCGGTGCGGCCATGGCGCATGGTAA MTYCYGCKPRPSGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSSVDSSSRYYACPCNRGWKMQCRCGHGAW Homology
BLAST of Cp4.1LG16g02840 vs. NCBI nr
Match: KAG6571042.1 (hypothetical protein SDJN03_29957, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 199 bits (507), Expect = 1.42e-64 Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0
BLAST of Cp4.1LG16g02840 vs. NCBI nr
Match: KAA0045689.1 (hypothetical protein E6C27_scaffold243G002050 [Cucumis melo var. makuwa] >TYJ99593.1 hypothetical protein E5676_scaffold123G001670 [Cucumis melo var. makuwa]) HSP 1 Score: 191 bits (484), Expect = 4.73e-61 Identity = 89/96 (92.71%), Postives = 92/96 (95.83%), Query Frame = 0
BLAST of Cp4.1LG16g02840 vs. NCBI nr
Match: KGN61893.1 (hypothetical protein Csa_006600 [Cucumis sativus]) HSP 1 Score: 184 bits (468), Expect = 1.31e-58 Identity = 86/96 (89.58%), Postives = 91/96 (94.79%), Query Frame = 0
BLAST of Cp4.1LG16g02840 vs. NCBI nr
Match: KAG6605007.1 (hypothetical protein SDJN03_02324, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 165 bits (418), Expect = 7.57e-51 Identity = 80/95 (84.21%), Postives = 85/95 (89.47%), Query Frame = 0
BLAST of Cp4.1LG16g02840 vs. NCBI nr
Match: PKI78722.1 (hypothetical protein CRG98_000947 [Punica granatum]) HSP 1 Score: 76.3 bits (186), Expect = 1.20e-15 Identity = 44/92 (47.83%), Postives = 55/92 (59.78%), Query Frame = 0
BLAST of Cp4.1LG16g02840 vs. ExPASy TrEMBL
Match: A0A5D3BJW1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001670 PE=4 SV=1) HSP 1 Score: 191 bits (484), Expect = 2.29e-61 Identity = 89/96 (92.71%), Postives = 92/96 (95.83%), Query Frame = 0
BLAST of Cp4.1LG16g02840 vs. ExPASy TrEMBL
Match: A0A0A0LJB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G263880 PE=4 SV=1) HSP 1 Score: 184 bits (468), Expect = 6.33e-59 Identity = 86/96 (89.58%), Postives = 91/96 (94.79%), Query Frame = 0
BLAST of Cp4.1LG16g02840 vs. ExPASy TrEMBL
Match: A0A2I0LDH6 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_000947 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 5.82e-16 Identity = 44/92 (47.83%), Postives = 55/92 (59.78%), Query Frame = 0
BLAST of Cp4.1LG16g02840 vs. ExPASy TrEMBL
Match: A0A1R3JDI7 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_17251 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 7.29e-12 Identity = 38/86 (44.19%), Postives = 51/86 (59.30%), Query Frame = 0
BLAST of Cp4.1LG16g02840 vs. ExPASy TrEMBL
Match: A0A6J1C2N0 (uncharacterized protein LOC111007895 OS=Momordica charantia OX=3673 GN=LOC111007895 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 2.11e-11 Identity = 36/60 (60.00%), Postives = 44/60 (73.33%), Query Frame = 0
BLAST of Cp4.1LG16g02840 vs. TAIR 10
Match: AT2G21185.1 (unknown protein; Has 9 Blast hits to 9 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 54.7 bits (130), Expect = 4.8e-08 Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 0
BLAST of Cp4.1LG16g02840 vs. TAIR 10
Match: AT2G21180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.0 bits (110), Expect = 9.9e-06 Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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