Cp4.1LG16g02780 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g02780
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Ribosome-binding factor A
Location	Cp4.1LG16: 4808954 .. 4812374 (-)
RNA-Seq Expression	Cp4.1LG16g02780
Synteny	Cp4.1LG16g02780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAACAAATGCATTTTAAAACTGTAAGGTTGACAGTAATATATAATGGAAATCTCTACTTAATAATAACATGTCCCTGAGCTTAATGACAATATGTAAAAAAAATATTTTAAAATCATGAGAGGCGCAACCATATGGTGTATGGCCAATTCACGGAGGTTTAAAATGGATCCCGGCAGATTCAGAGGTGTTGCAGTACGCCATTCTTCCTGAGGCCTCTTCGGGAGCGGATAAATATCTCTCGTTTCTCACCTCGATCACCGATGTCGAAATCTCCGGCGACTTGCAGGTATTTTGAGAGATTGTTCAAATTGAAGAGCTAGGCAGGGTTACTTTTTGCTGTTCTTGCGATGTTCTGTAGTGCGTAACAGAATTAGGTTTTGTTTTCCTTTTGTGCTCTTTATGCCCTGAAATTGTAGTTACATTATGGAACTGAGAAAGAATTGAAGCAAAGGACTAAAACCTAAAGGGAATGATTGAATATTTACACTGCACCCAAGCGGTTCATTTGTTGAAGATAAGGGATTCTATGGAATTTAGACTTCTTAAATTGCTACACAATTCAATTGCTGGTTGCATCTTGGGCTGTGTTTATACTGTGTTTTAGCCACTGGGAAATGATTAGGAGGCTTCAGAAGCCCATTTGCAAATGCTTGGTTGACATTTTCTTTGAAGCACAAGTGAAGAAGTATTCAAAATTTTAGCTCGAGGATTAGACTCTTGGGGAGATATTGAAATTGAAGAGAGCTCTTGAGGAAGGCTAGAAAATTAGGAGAAATATGTTGTACTAGCCCTAGCCCAAGCCCACCATGGAGAAGTATGTTATAACAACTCAAGCCCACCACTAGCTAGCATATATTCTCCTCTTTGAGATTTTTCATTCGGGCTTCCCCTCAAGGTTGGAAGTTTCCACACCCTTGTAAGGCCGGTTGAGAATTGTTGGGAGAGGAGTTCTACATCGGCTAGGTTGATCATGGGTTGATAAGTAAGGAGTACATCTCCATTGATACGAGGCTTTTTGGGGAAACCAAAAGTAAAGTCACGAAAGTTTATGCTCAAAGTGGACAATATCATACCATACCATTGTGGAGATTCGTGATTCCTAACAAGGTTAACCGATACACCCTTACAAGGAATGTTTCGTTCTCCTTTCCAACCGATGTGAGATCTCACAATCCACCCATCTACTAGGGAGAGGTTTCCACACCCTTATAAGGAATGCTTTGTTCCCCTCTCCAACCGATGTGGGATCTCACACACGTGCTAGGACGACAATGCTTTTGGAGGAATCTTTGAGAAGTTATGCTGACATCAACCACTGGGTAAACCATTGCTTCTCAATCTGGGACTAATTCTACTGTAGAGACAAATGAAAAAAGTTCATTGATTTCCTTTTTCATAAACCAACTAATCCTGATCACTTGTGTGAACTACCTAACCTCTCCCTATTTTTTAGGTGATGTAACTCGTTCTCGTGGCTTCTTCCTTCCCTGATATTACCTGAACCTTTAATTCGATTGAACTCCTCTGCCTACTTACTTGACTCCCCTTCCCTGAACCTATTTACCTTATTGATTAACCTGACCTTCACCTTTCTTTCTTTGACTCTATTCTCTGAACCTCGCTCCTTCGCCTCGTAAACTATAAGTCTCGCTGCTGCTTTTGAACTTAAAGTGGCAGCTACATAAATGGTGGTTATGTTTTTTTTATTGATGTTTGAACATTGTGTGAGCTGAGCTGCATATAACTTAGGACTTTCCTCTTTGTCTTACTATAATTCAAAATATTTCCTTCACTTAGCTTCATATATGGATATGTTAAGTGCAATACAAACTCTTTGGTCTTCTCTGAGCCATGACTGAGATGTTTAGTGGTTTGCTCTTTTTGCTCGACTGTAGTAAGCCTCCTGACTTTCAATCATGCCCAGAAATCAGTTTTCTTGCTCTCCATTGCTTGTTGTCGTCGTCGATGTGAAATGCAACGTAGAGATTTTTTCGTAAAAGTGAACAATACAATATACCTTTTTATTGTTGTGAAATTTTGAGTACTATGAAGGTCATGAAGGTCCAACCTTACTTTTGCCAATTAACTCTTCACCTTCTATGGACTGTCTTAAGTAATAAGGGTCTTAGATGTTGGAAGCTCCAATGTCCTGGGTTTAAGTCTCTAGCCATTGACCATGTTTTTAGTTCACTTAGCTATGCTCACTTTCGTGTCTCTAGCCATAAAACTTTAGTGTAAAATTTTTGTTATCTTCAAAGCTCACCATGGGTTGGGCAAAGTAGCTCAGGATTAGTGAATTTGGGTGTAACAGCCCAAGCTCACTGCTAACAGATATTGTCCGTTTTGACCCATTACGTATCGTTGTCTGCCTCACTATTTTAAAACGTGTATGCTAGAGAGAGGTTTCCTTGTTCCCCTCTCCAACCGATGTGAGATCTCACAATCCACCCCCTTGGGGGCCAGCGTCCTCGTTGGCACACTGCCCAGTGTTTGGCTTTGATATCATTTGTATCTGCACAAACCCACCGCTAACATATATTATCCGCTTTGTCCCATTATGTATCGTCGTCAGTCTCACAGTTTTAAAACGTGTCTGTTAGGGAGAGGTATCCACACTCTTATAAAGAATACTTCGTTCTCCTCTTCAACTGATGTGGGATCTAACGCATGACCCAATGAGTGGAGGCCTCCCGATTATGAAGAACACCGATGGGGGAATAGATTTGACTGTTAAATGTACATCACAAAGACTTATGTTTAAACCTCATCTAGTCACTTCCTTTTGCAATCTAAATTTAAGCAACTGGAAGATTGCTTCATGGTTCTTTCCTGTACTATTATGGATTCAAACTTTCCCAGGTAATTTCTATATCAGATCGGATTGGATGAAGGACAAAAAGAAGGATACTAACGATGAAGACTTCGAGCAATCGGAACTGTCCGATGCTCCTGAAGATGACAGGGACTGCAAAGGTGATGATGCTGATGAAGACATTACATATCCTCATCTGTGCTGAGGCATCGGTTCACTTTCGCAAGGTTCGTCATCGTAACGAGTTCAAGCAACAAATTTACTACCTCTGTCCTTGTCCTTAGCTTAGCCTTGATTTTGGATGATATGATTTTGAAGCCCAAATTGTTATTTGCAGAGCAAGAAGGCACTAAAATATCATAATGATGCTGCTCAACATTCTCCACTATACCATCCAGAATCTATGATCATCATCAAAGGTAATAGACAGAAATTGCCTATTCTACCCGAAATTAAAATATCGATATCAACAAAAATGTCCCGACAGATACTCGTATTAGTATTTTTCATGATTTAGATGTCTTATCTCCTCGATCTCGGTATTGAATCGTGTTCGATTCACAAAAGGGTGTTTGTTGAGATGAAATATTGTTCCCATCATTGC

mRNA sequence

ATGGCGCAACCATATGGTGTATGGCCAATTCACGGAGGTTTAAAATGGATCCCGGCAGATTCAGAGGTGTTGCAGTACGCCATTCTTCCTGAGGCCTCTTCGGGAGCGGATAAATATCTCTCGTTTCTCACCTCGATCACCGATGTCGAAATCTCCGGCGACTTGCAGTGCGTAACAGAATTAGGTAATTTCTATATCAGATCGGATTGGATGAAGGACAAAAAGAAGGATACTAACGATGAAGACTTCGAGCAATCGGAACTGTCCGATGCTCCTGAAGATGACAGGGACTGCAAAGGTGATGATGCTGATGAAGACATTACATATCCTCATCTGTGCTGAGGCATCGGTTCACTTTCGCAAGAGCAAGAAGGCACTAAAATATCATAATGATGCTGCTCAACATTCTCCACTATACCATCCAGAATCTATGATCATCATCAAAGGTAATAGACAGAAATTGCCTATTCTACCCGAAATTAAAATATCGATATCAACAAAAATGTCCCGACAGATACTCGTATTAGTATTTTTCATGATTTAGATGTCTTATCTCCTCGATCTCGGTATTGAATCGTGTTCGATTCACAAAAGGGTGTTTGTTGAGATGAAATATTGTTCCCATCATTGC

Coding sequence (CDS)

ATGGCGCAACCATATGGTGTATGGCCAATTCACGGAGGTTTAAAATGGATCCCGGCAGATTCAGAGGTGTTGCAGTACGCCATTCTTCCTGAGGCCTCTTCGGGAGCGGATAAATATCTCTCGTTTCTCACCTCGATCACCGATGTCGAAATCTCCGGCGACTTGCAGTGCGTAACAGAATTAGGTAATTTCTATATCAGATCGGATTGGATGAAGGACAAAAAGAAGGATACTAACGATGAAGACTTCGAGCAATCGGAACTGTCCGATGCTCCTGAAGATGACAGGGACTGCAAAGGTGATGATGCTGATGAAGACATTACATATCCTCATCTGTGCTGA

Protein sequence

MAQPYGVWPIHGGLKWIPADSEVLQYAILPEASSGADKYLSFLTSITDVEISGDLQCVTELGNFYIRSDWMKDKKKDTNDEDFEQSELSDAPEDDRDCKGDDADEDITYPHLC

Homology

[Close]

BLAST of Cp4.1LG16g02780 vs. ExPASy Swiss-Prot
Match: O65693 (Probable ribosome-binding factor A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g34730 PE=2 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.4e-06
Identity = 47/134 (35.07%), Postives = 63/134 (47.01%), Query Frame = 0


Query: 23  VLQYAILPEASSGADKYLSFLTSITDVEISGDLQCV------------------------ 82
           VLQ+A+LPEA+ GAD+YLS LT+I+DVE+S DLQ V                        
Sbjct: 80  VLQHAVLPEAALGADRYLSSLTTISDVEVSNDLQVVKVYVSVFGDDRGKDVAIAGLKSKA 139

Query: 83  ----TELGN----------FYIRSDWMK---------DKKKDTNDEDFEQSELSDAPEDD 110
               +ELG            +I  + M+         DK K        ++E SD+ EDD
Sbjct: 140 KYVRSELGKRMKLRLTPEVRFIEDEAMERGSRVIAILDKIKAEKGSGEGKTEPSDSTEDD 199

[Close]

BLAST of Cp4.1LG16g02780 vs. NCBI nr
Match: XP_038900542.1 (probable ribosome-binding factor A, chloroplastic [Benincasa hispida])

HSP 1 Score: 90.5 bits (223), Expect = 1.35e-19
Identity = 67/139 (48.20%), Postives = 73/139 (52.52%), Query Frame = 0


Query: 22  EVLQYAILPEASSGADKYLSFLTSITDVEISGDLQCVT--------ELGNF--------- 81
           +VLQYAILPEAS GADKYLS LT+ITDVE+S DLQ V         E G           
Sbjct: 86  KVLQYAILPEASLGADKYLSSLTTITDVEVSADLQVVKVYVSVFGDERGKDVAIAGLKSK 145

Query: 82  --YIRS--------------------------------DWMKDKKKDTNDEDFEQSELSD 109
             Y+RS                                D +KDKKKD +DEDFE SELSD
Sbjct: 146 AKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRVIAILDRIKDKKKDNDDEDFEPSELSD 205

[Close]

BLAST of Cp4.1LG16g02780 vs. NCBI nr
Match: XP_004151338.1 (probable ribosome-binding factor A, chloroplastic [Cucumis sativus] >KGN61860.1 hypothetical protein Csa_006608 [Cucumis sativus])

HSP 1 Score: 89.0 bits (219), Expect = 5.19e-19
Identity = 66/139 (47.48%), Postives = 74/139 (53.24%), Query Frame = 0


Query: 22  EVLQYAILPEASSGADKYLSFLTSITDVEISGDLQCVT--------ELGNF--------- 81
           +VLQ+AILPEAS GADKYLS LT+ITDVE+S DLQ V         E G           
Sbjct: 85  KVLQFAILPEASLGADKYLSSLTTITDVEVSADLQVVKVYVSVFGDERGKDVAIAGLKSK 144

Query: 82  --YIRS--------------------------------DWMKDKKKDTNDEDFEQSELSD 109
             Y+RS                                D +KDKKKDT DEDF+Q ELSD
Sbjct: 145 AKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRVIAILDRIKDKKKDTVDEDFDQPELSD 204

[Close]

BLAST of Cp4.1LG16g02780 vs. NCBI nr
Match: XP_008457619.1 (PREDICTED: probable ribosome-binding factor A, chloroplastic [Cucumis melo] >XP_016902146.1 PREDICTED: probable ribosome-binding factor A, chloroplastic [Cucumis melo] >KAA0045661.1 putative ribosome-binding factor A [Cucumis melo var. makuwa] >TYK02601.1 putative ribosome-binding factor A [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 1.53e-18
Identity = 65/139 (46.76%), Postives = 74/139 (53.24%), Query Frame = 0


Query: 22  EVLQYAILPEASSGADKYLSFLTSITDVEISGDLQCVT--------ELGNF--------- 81
           +VLQ+AILPEAS GADKYLS LT+ITDVE+S DLQ V         E G           
Sbjct: 88  KVLQFAILPEASLGADKYLSSLTTITDVEVSADLQVVKVYVSVFGDEKGKDVAMAGLKSK 147

Query: 82  --YIRS--------------------------------DWMKDKKKDTNDEDFEQSELSD 109
             Y+RS                                D +KDKKKDT DEDF++ ELSD
Sbjct: 148 AKYVRSVLGKRMKLRLTPEICFIEDESFERGSRVIAILDRIKDKKKDTIDEDFDEPELSD 207

[Close]

BLAST of Cp4.1LG16g02780 vs. NCBI nr
Match: KAG6605037.1 (putative ribosome-binding factor A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 86.7 bits (213), Expect = 6.32e-18
Identity = 64/143 (44.76%), Postives = 75/143 (52.45%), Query Frame = 0


Query: 22  EVLQYAILPEASSGADKYLSFLTSITDVEISGDLQCVT--------ELGNF--------- 81
           +VLQ+AILPEAS GADKYLS LT+ITDVEIS DLQ V         E G           
Sbjct: 87  KVLQFAILPEASLGADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSK 146

Query: 82  --YIRS--------------------------------DWMKDKKKDTNDEDFEQSELSD 113
             Y+RS                                D +KD+K + +DED EQSELSD
Sbjct: 147 AKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRVIAILDRIKDEKNNIDDEDMEQSELSD 206

[Close]

BLAST of Cp4.1LG16g02780 vs. NCBI nr
Match: XP_022948118.1 (probable ribosome-binding factor A, chloroplastic [Cucurbita moschata])

HSP 1 Score: 83.2 bits (204), Expect = 8.90e-17
Identity = 63/139 (45.32%), Postives = 73/139 (52.52%), Query Frame = 0


Query: 22  EVLQYAILPEASSGADKYLSFLTSITDVEISGDLQCVT--------ELGNF--------- 81
           +VLQ+AILPEAS GADKYLS LT+ITDVEIS DLQ V         E G           
Sbjct: 87  KVLQFAILPEASLGADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSK 146

Query: 82  --YIRS--------------------------------DWMKDKKKDTNDEDFEQSELSD 109
             Y+RS                                D +KD+K + +DED EQSELSD
Sbjct: 147 AKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRVIAILDRIKDEKNNIDDEDMEQSELSD 206

[Close]

BLAST of Cp4.1LG16g02780 vs. ExPASy TrEMBL
Match: A0A0A0LIX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G252090 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.51e-19
Identity = 66/139 (47.48%), Postives = 74/139 (53.24%), Query Frame = 0


Query: 22  EVLQYAILPEASSGADKYLSFLTSITDVEISGDLQCVT--------ELGNF--------- 81
           +VLQ+AILPEAS GADKYLS LT+ITDVE+S DLQ V         E G           
Sbjct: 85  KVLQFAILPEASLGADKYLSSLTTITDVEVSADLQVVKVYVSVFGDERGKDVAIAGLKSK 144

Query: 82  --YIRS--------------------------------DWMKDKKKDTNDEDFEQSELSD 109
             Y+RS                                D +KDKKKDT DEDF+Q ELSD
Sbjct: 145 AKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRVIAILDRIKDKKKDTVDEDFDQPELSD 204

[Close]

BLAST of Cp4.1LG16g02780 vs. ExPASy TrEMBL
Match: A0A1S4E1P3 (probable ribosome-binding factor A, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497269 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 7.41e-19
Identity = 65/139 (46.76%), Postives = 74/139 (53.24%), Query Frame = 0


Query: 22  EVLQYAILPEASSGADKYLSFLTSITDVEISGDLQCVT--------ELGNF--------- 81
           +VLQ+AILPEAS GADKYLS LT+ITDVE+S DLQ V         E G           
Sbjct: 88  KVLQFAILPEASLGADKYLSSLTTITDVEVSADLQVVKVYVSVFGDEKGKDVAMAGLKSK 147

Query: 82  --YIRS--------------------------------DWMKDKKKDTNDEDFEQSELSD 109
             Y+RS                                D +KDKKKDT DEDF++ ELSD
Sbjct: 148 AKYVRSVLGKRMKLRLTPEICFIEDESFERGSRVIAILDRIKDKKKDTIDEDFDEPELSD 207

[Close]

BLAST of Cp4.1LG16g02780 vs. ExPASy TrEMBL
Match: A0A5A7TVW4 (Putative ribosome-binding factor A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00030 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 7.41e-19
Identity = 65/139 (46.76%), Postives = 74/139 (53.24%), Query Frame = 0


Query: 22  EVLQYAILPEASSGADKYLSFLTSITDVEISGDLQCVT--------ELGNF--------- 81
           +VLQ+AILPEAS GADKYLS LT+ITDVE+S DLQ V         E G           
Sbjct: 88  KVLQFAILPEASLGADKYLSSLTTITDVEVSADLQVVKVYVSVFGDEKGKDVAMAGLKSK 147

Query: 82  --YIRS--------------------------------DWMKDKKKDTNDEDFEQSELSD 109
             Y+RS                                D +KDKKKDT DEDF++ ELSD
Sbjct: 148 AKYVRSVLGKRMKLRLTPEICFIEDESFERGSRVIAILDRIKDKKKDTIDEDFDEPELSD 207

[Close]

BLAST of Cp4.1LG16g02780 vs. ExPASy TrEMBL
Match: A0A6J1G8H2 (probable ribosome-binding factor A, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451795 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.31e-17
Identity = 63/139 (45.32%), Postives = 73/139 (52.52%), Query Frame = 0


Query: 22  EVLQYAILPEASSGADKYLSFLTSITDVEISGDLQCVT--------ELGNF--------- 81
           +VLQ+AILPEAS GADKYLS LT+ITDVEIS DLQ V         E G           
Sbjct: 87  KVLQFAILPEASLGADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSK 146

Query: 82  --YIRS--------------------------------DWMKDKKKDTNDEDFEQSELSD 109
             Y+RS                                D +KD+K + +DED EQSELSD
Sbjct: 147 AKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRVIAILDRIKDEKNNIDDEDMEQSELSD 206

[Close]

BLAST of Cp4.1LG16g02780 vs. ExPASy TrEMBL
Match: A0A5N5FJE4 (Ribosome-binding factor A OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_004264 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.58e-16
Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = 0


Query: 22  EVLQYAILPEASSGADKYLSFLTSITDVEISGDLQCVTELGNFYIRSDWMKDKKKDTNDE 81
           +VLQYAILPE S GAD++LS LT+I+DVE+S DLQ +  L       D +K+++KD   +
Sbjct: 82  KVLQYAILPEVSLGADRFLSSLTTISDVEVSTDLQVIAIL-------DKIKNERKDEEIQ 141

Query: 82  DFEQSELSDAPEDDRDCKGDDADEDITY 109
           D EQ E S+APEDD D + DD DEDI Y
Sbjct: 142 DEEQLESSEAPEDDGDWEADDPDEDIIY 162

[Close]

BLAST of Cp4.1LG16g02780 vs. TAIR 10
Match: AT4G34730.1 (ribosome-binding factor A family protein )

HSP 1 Score: 53.9 bits (128), Expect = 9.6e-08
Identity = 47/134 (35.07%), Postives = 63/134 (47.01%), Query Frame = 0


Query: 23  VLQYAILPEASSGADKYLSFLTSITDVEISGDLQCV------------------------ 82
           VLQ+A+LPEA+ GAD+YLS LT+I+DVE+S DLQ V                        
Sbjct: 80  VLQHAVLPEAALGADRYLSSLTTISDVEVSNDLQVVKVYVSVFGDDRGKDVAIAGLKSKA 139

Query: 83  ----TELGN----------FYIRSDWMK---------DKKKDTNDEDFEQSELSDAPEDD 110
               +ELG            +I  + M+         DK K        ++E SD+ EDD
Sbjct: 140 KYVRSELGKRMKLRLTPEVRFIEDEAMERGSRVIAILDKIKAEKGSGEGKTEPSDSTEDD 199

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g02780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65693	1.4e-06	35.07	Probable ribosome-binding factor A, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Cp4.1LG16g02780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900542.1	1.35e-19	48.20	probable ribosome-binding factor A, chloroplastic [Benincasa hispida]	[more]
XP_004151338.1	5.19e-19	47.48	probable ribosome-binding factor A, chloroplastic [Cucumis sativus] >KGN61860.1 ...	[more]
XP_008457619.1	1.53e-18	46.76	PREDICTED: probable ribosome-binding factor A, chloroplastic [Cucumis melo] >XP_...	[more]
KAG6605037.1	6.32e-18	44.76	putative ribosome-binding factor A, chloroplastic, partial [Cucurbita argyrosper...	[more]
XP_022948118.1	8.90e-17	45.32	probable ribosome-binding factor A, chloroplastic [Cucurbita moschata]	[more]

BLAST of Cp4.1LG16g02780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIX7	2.51e-19	47.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G252090 PE=3 SV=1	[more]
A0A1S4E1P3	7.41e-19	46.76	probable ribosome-binding factor A, chloroplastic OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A5A7TVW4	7.41e-19	46.76	Putative ribosome-binding factor A OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1G8H2	4.31e-17	45.32	probable ribosome-binding factor A, chloroplastic OS=Cucurbita moschata OX=3662 ...	[more]
A0A5N5FJE4	2.58e-16	54.55	Ribosome-binding factor A OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8...	[more]

BLAST of Cp4.1LG16g02780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34730.1	9.6e-08	35.07	ribosome-binding factor A family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g02780.1	Cp4.1LG16g02780.1	mRNA