Cp4.1LG16g02710 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g02710
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Auxin-responsive protein
Location	Cp4.1LG16: 4814742 .. 4815188 (+)
RNA-Seq Expression	Cp4.1LG16g02710
Synteny	Cp4.1LG16g02710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCGGTGGTGGCGAAAAGCAACAAGATCCGGAGCATTGTCCGGCTCCGACAAATGTTACAACACTGGCGGAAGAAGGCACGTGCAGCGGCCTCCAGAGCACCGCCGACTGATGTCCCCGCTGATCACGTTGCCGTATGCGTTGGCAGTGGCTGTCGGCGATTCATTGTCCGTGCGTCCTTCCTGAACCATCCGATCTTCCGGAAGTTGCTCTCACAGGCTGAAGAGGAATACGGCTTCGCTACGCGAGGTCCTCTGGCGCTTCCGTGCGACGAATCGGTTTTCGAAGAGGTTATCCGAGTCATTGCTCGCTCCGAGTTGAATAACTCGTCGCGAAGTTCGAGTATCAAGGATTTGCAGAGGCGATGCGATAAAGATGTCAGAAAAAACCTCGAGTATTTAGGCGAATCGAGACCTTTACTGTACGGATTCGCTGATAGTTGA

mRNA sequence

ATGTCGTCGGTGGTGGCGAAAAGCAACAAGATCCGGAGCATTGTCCGGCTCCGACAAATGTTACAACACTGGCGGAAGAAGGCACGTGCAGCGGCCTCCAGAGCACCGCCGACTGATGTCCCCGCTGATCACGTTGCCGTATGCGTTGGCAGTGGCTGTCGGCGATTCATTGTCCGTGCGTCCTTCCTGAACCATCCGATCTTCCGGAAGTTGCTCTCACAGGCTGAAGAGGAATACGGCTTCGCTACGCGAGGTCCTCTGGCGCTTCCGTGCGACGAATCGGTTTTCGAAGAGGTTATCCGAGTCATTGCTCGCTCCGAGTTGAATAACTCGTCGCGAAGTTCGAGTATCAAGGATTTGCAGAGGCGATGCGATAAAGATGTCAGAAAAAACCTCGAGTATTTAGGCGAATCGAGACCTTTACTGTACGGATTCGCTGATAGTTGA

Coding sequence (CDS)

ATGTCGTCGGTGGTGGCGAAAAGCAACAAGATCCGGAGCATTGTCCGGCTCCGACAAATGTTACAACACTGGCGGAAGAAGGCACGTGCAGCGGCCTCCAGAGCACCGCCGACTGATGTCCCCGCTGATCACGTTGCCGTATGCGTTGGCAGTGGCTGTCGGCGATTCATTGTCCGTGCGTCCTTCCTGAACCATCCGATCTTCCGGAAGTTGCTCTCACAGGCTGAAGAGGAATACGGCTTCGCTACGCGAGGTCCTCTGGCGCTTCCGTGCGACGAATCGGTTTTCGAAGAGGTTATCCGAGTCATTGCTCGCTCCGAGTTGAATAACTCGTCGCGAAGTTCGAGTATCAAGGATTTGCAGAGGCGATGCGATAAAGATGTCAGAAAAAACCTCGAGTATTTAGGCGAATCGAGACCTTTACTGTACGGATTCGCTGATAGTTGA

Protein sequence

MSSVVAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPTDVPADHVAVCVGSGCRRFIVRASFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDLQRRCDKDVRKNLEYLGESRPLLYGFADS

Homology

[Close]

BLAST of Cp4.1LG16g02710 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.1e-11
Identity = 31/64 (48.44%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 40  VPADHVAVCVGSGCRRFIVRASFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEV 99
           VPA HV V VG    RF+V A  +NHPIF  LL+++ +EYG+A +G L +PC   VFE V
Sbjct: 54  VPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERV 113

Query: 100 IRVI 104
           +  +
Sbjct: 114 VETL 117

[Close]

BLAST of Cp4.1LG16g02710 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.1e-11
Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 3   SVVAKSNKIRSIVRLRQMLQH----WRKKARAAASRAPPTDVPADHVAVCVGSGCRRFIV 62
           +++ K++K+     L+Q+L+      +K          P DVP  H  V VG    R+IV
Sbjct: 2   AIMKKTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIV 61

Query: 63  RASFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVI 104
             SFL HP F+ LL +AEEE+GF     L +PCDE VF+ +  +I
Sbjct: 62  PISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMI 106

[Close]

BLAST of Cp4.1LG16g02710 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-10
Identity = 34/87 (39.08%), Postives = 53/87 (60.92%), Query Frame = 0


Query: 26  KKARAAASRAPPTDVPADHVAVCVGSGCRRFIVRASFLNHPIFRKLLSQAEEEYGFATRG 85
           K+A  A+S      VP+ HV V VG    RF+V A  LNHP+F  LL+++ +EYG+  +G
Sbjct: 40  KRATVASS------VPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKG 99

Query: 86  PLALPCDESVFEEVIRVIARSELNNSS 113
            L +PC+  VFE+V+  +     +++S
Sbjct: 100 VLHIPCNVFVFEQVVESLRSGIADDTS 120

[Close]

BLAST of Cp4.1LG16g02710 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.5e-10
Identity = 29/61 (47.54%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 40  VPADHVAVCVGSGCRRFIVRASFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEV 99
           VP  HV V VG    RF+V A  LNHP+F  LL Q+ +EYG+  +G L +PC   VFE +
Sbjct: 38  VPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERI 97

Query: 100 I 101
           +
Sbjct: 98  L 98

[Close]

BLAST of Cp4.1LG16g02710 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.5e-10
Identity = 29/68 (42.65%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 33  SRAPPTDVPADHVAVCVGSGCRRFIVRASFLNHPIFRKLLSQAEEEYGFATRGPLALPCD 92
           S+   + VP  HV V VG    RF+V A  LNHP+F  LL+++ +EYG+  +G L +PC 
Sbjct: 43  SKKQTSSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCH 102

Query: 93  ESVFEEVI 101
             VFE ++
Sbjct: 103 VLVFERIM 110

[Close]

BLAST of Cp4.1LG16g02710 vs. NCBI nr
Match: XP_023512602.1 (auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 291 bits (745), Expect = 3.58e-99
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MSSVVAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPTDVPADHVAVCVGSGCRRFIVRA 60
           MSSVVAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPTDVPADHVAVCVGSGCRRFIVRA
Sbjct: 1   MSSVVAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPTDVPADHVAVCVGSGCRRFIVRA 60

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL
Sbjct: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120

Query: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 148
           QRRCDKDVRKNLEYLGESRPLLYGFADS
Sbjct: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 148

[Close]

BLAST of Cp4.1LG16g02710 vs. NCBI nr
Match: XP_022986631.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 288 bits (736), Expect = 8.43e-98
Identity = 146/148 (98.65%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MSSVVAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPTDVPADHVAVCVGSGCRRFIVRA 60
           MSSV+AKSNKIRSIVRLRQMLQHWRKKARAAASRAPP DVPADHVAVCVGSGCRRFIVRA
Sbjct: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA 60

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL
Sbjct: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120

Query: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 148
           QRRCDKDVRKNLEYLGESRPLLYGFADS
Sbjct: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 148

[Close]

BLAST of Cp4.1LG16g02710 vs. NCBI nr
Match: XP_022943918.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata] >KAG6571069.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010881.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 287 bits (734), Expect = 1.70e-97
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MSSVVAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPTDVPADHVAVCVGSGCRRFIVRA 60
           MSSV+AKSNKIRSIVRLRQMLQHWRKKARAAASRAPP DVPADHVAVCVGSGCRRFIVRA
Sbjct: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA 60

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSS+KDL
Sbjct: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSLKDL 120

Query: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 148
           QRRCDKDVRKNLEYLGESRPLLYGFADS
Sbjct: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 148

[Close]

BLAST of Cp4.1LG16g02710 vs. NCBI nr
Match: XP_038902037.1 (auxin-responsive protein SAUR71-like [Benincasa hispida])

HSP 1 Score: 256 bits (653), Expect = 4.53e-85
Identity = 128/149 (85.91%), Postives = 141/149 (94.63%), Query Frame = 0


Query: 1   MSSVVAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPTDVPADHVAVCVGSGCRRFIVRA 60
           MS   +KSNKIR IVRLRQMLQHWRKKARAAA RAPP+DVPA HVAVCVGSGCRRFIVRA
Sbjct: 1   MSLDTSKSNKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRA 60

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           +FLNHPIFRKLLSQAEEEYGF TRGPLALPCDESVFEEV+RV+ARSEL+NSSR+S++KDL
Sbjct: 61  TFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVARSELSNSSRNSNLKDL 120

Query: 121 QRRCDKDVR-KNLEYLGESRPLLYGFADS 148
           QRRCD+DVR KNLE+LGESRPLLYGF+D+
Sbjct: 121 QRRCDEDVRIKNLEFLGESRPLLYGFSDN 149

[Close]

BLAST of Cp4.1LG16g02710 vs. NCBI nr
Match: XP_004147056.1 (auxin-induced protein X10A [Cucumis sativus])

HSP 1 Score: 243 bits (619), Expect = 6.88e-80
Identity = 120/149 (80.54%), Postives = 136/149 (91.28%), Query Frame = 0


Query: 1   MSSVVAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPTDVPADHVAVCVGSGCRRFIVRA 60
           MS   +KS+KIR IVRLRQMLQHWRKKARAAA  APP+DVPA H+AVCVG+GCRRFIVR 
Sbjct: 1   MSPETSKSHKIRRIVRLRQMLQHWRKKARAAACTAPPSDVPAGHIAVCVGTGCRRFIVRT 60

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           +FLNHPIF KLLSQAEEEYGF TRGPLALPCDESVFEEV+RV+A SEL+NSSR+S++KDL
Sbjct: 61  TFLNHPIFLKLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVAHSELSNSSRTSNLKDL 120

Query: 121 QRRCDKDVR-KNLEYLGESRPLLYGFADS 148
            RRCD+DVR KNLE+LGESRPLLYGF+D+
Sbjct: 121 TRRCDEDVRSKNLEFLGESRPLLYGFSDN 149

[Close]

BLAST of Cp4.1LG16g02710 vs. ExPASy TrEMBL
Match: A0A6J1JBR0 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111484316 PE=3 SV=1)

HSP 1 Score: 288 bits (736), Expect = 4.08e-98
Identity = 146/148 (98.65%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MSSVVAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPTDVPADHVAVCVGSGCRRFIVRA 60
           MSSV+AKSNKIRSIVRLRQMLQHWRKKARAAASRAPP DVPADHVAVCVGSGCRRFIVRA
Sbjct: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA 60

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL
Sbjct: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120

Query: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 148
           QRRCDKDVRKNLEYLGESRPLLYGFADS
Sbjct: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 148

[Close]

BLAST of Cp4.1LG16g02710 vs. ExPASy TrEMBL
Match: A0A6J1FXH8 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111448496 PE=3 SV=1)

HSP 1 Score: 287 bits (734), Expect = 8.24e-98
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MSSVVAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPTDVPADHVAVCVGSGCRRFIVRA 60
           MSSV+AKSNKIRSIVRLRQMLQHWRKKARAAASRAPP DVPADHVAVCVGSGCRRFIVRA
Sbjct: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA 60

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSS+KDL
Sbjct: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSLKDL 120

Query: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 148
           QRRCDKDVRKNLEYLGESRPLLYGFADS
Sbjct: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 148

[Close]

BLAST of Cp4.1LG16g02710 vs. ExPASy TrEMBL
Match: A0A5A7TQK8 (Auxin-responsive protein SAUR64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00010 PE=3 SV=1)

HSP 1 Score: 242 bits (618), Expect = 4.73e-80
Identity = 119/149 (79.87%), Postives = 137/149 (91.95%), Query Frame = 0


Query: 1   MSSVVAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPTDVPADHVAVCVGSGCRRFIVRA 60
           MS   +KS+KIR IVRLRQMLQHWRKKAR AASRAPP+DVPA H+AVCVG+GCRRFIV  
Sbjct: 1   MSPETSKSHKIRRIVRLRQMLQHWRKKARVAASRAPPSDVPAGHIAVCVGTGCRRFIVPT 60

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           +FLNHPIFR+LLSQAEEEYGF TRGPLALPCDESVFEEV+RV+ARSEL+N+SR+S++KDL
Sbjct: 61  TFLNHPIFRQLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVARSELSNTSRTSNLKDL 120

Query: 121 QRRCDKDVR-KNLEYLGESRPLLYGFADS 148
            RRCD+DVR KNLE+LGES PLLYGF+D+
Sbjct: 121 TRRCDEDVRSKNLEFLGESSPLLYGFSDN 149

[Close]

BLAST of Cp4.1LG16g02710 vs. ExPASy TrEMBL
Match: A0A1S3C5H3 (auxin-responsive protein SAUR64 OS=Cucumis melo OX=3656 GN=LOC103497270 PE=3 SV=1)

HSP 1 Score: 242 bits (618), Expect = 2.53e-79
Identity = 119/149 (79.87%), Postives = 137/149 (91.95%), Query Frame = 0


Query: 1   MSSVVAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPTDVPADHVAVCVGSGCRRFIVRA 60
           MS   +KS+KIR IVRLRQMLQHWRKKAR AASRAPP+DVPA H+AVCVG+GCRRFIV  
Sbjct: 51  MSPETSKSHKIRRIVRLRQMLQHWRKKARVAASRAPPSDVPAGHIAVCVGTGCRRFIVPT 110

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           +FLNHPIFR+LLSQAEEEYGF TRGPLALPCDESVFEEV+RV+ARSEL+N+SR+S++KDL
Sbjct: 111 TFLNHPIFRQLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVARSELSNTSRTSNLKDL 170

Query: 121 QRRCDKDVR-KNLEYLGESRPLLYGFADS 148
            RRCD+DVR KNLE+LGES PLLYGF+D+
Sbjct: 171 TRRCDEDVRSKNLEFLGESSPLLYGFSDN 199

[Close]

BLAST of Cp4.1LG16g02710 vs. ExPASy TrEMBL
Match: A0A0A0LM48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G257100 PE=3 SV=1)

HSP 1 Score: 243 bits (619), Expect = 3.34e-79
Identity = 120/149 (80.54%), Postives = 136/149 (91.28%), Query Frame = 0


Query: 1   MSSVVAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPTDVPADHVAVCVGSGCRRFIVRA 60
           MS   +KS+KIR IVRLRQMLQHWRKKARAAA  APP+DVPA H+AVCVG+GCRRFIVR 
Sbjct: 70  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAACTAPPSDVPAGHIAVCVGTGCRRFIVRT 129

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           +FLNHPIF KLLSQAEEEYGF TRGPLALPCDESVFEEV+RV+A SEL+NSSR+S++KDL
Sbjct: 130 TFLNHPIFLKLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVAHSELSNSSRTSNLKDL 189

Query: 121 QRRCDKDVR-KNLEYLGESRPLLYGFADS 148
            RRCD+DVR KNLE+LGESRPLLYGF+D+
Sbjct: 190 TRRCDEDVRSKNLEFLGESRPLLYGFSDN 218

[Close]

BLAST of Cp4.1LG16g02710 vs. TAIR 10
Match: AT1G19840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 170.2 bits (430), Expect = 1.2e-42
Identity = 88/150 (58.67%), Postives = 114/150 (76.00%), Query Frame = 0


Query: 1   MSSVVAKSNKIRSIVRLRQMLQHWRKKAR-AAASRAPPTDVPADHVAVCVGSGCRRFIVR 60
           M+  + K +KIR IVRLRQML+ WR KAR ++ SR  P+DVP+ HVAVCVGSGCRRF+VR
Sbjct: 1   MAGSLVKCSKIRHIVRLRQMLRRWRNKARLSSVSRCVPSDVPSGHVAVCVGSGCRRFVVR 60

Query: 61  ASFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKD 120
           AS+LNHPI   LL QAEEE+GFA +GPL +PC+ESVFEE IR I+RS+ + SSR +   D
Sbjct: 61  ASYLNHPIISNLLVQAEEEFGFANQGPLVIPCEESVFEEAIRFISRSDSSRSSRFTCPDD 120

Query: 121 LQRRCDK--DVRKNLEYLGESRPLLYGFAD 148
           LQ +C+    ++  L+ + ESRPLL+G A+
Sbjct: 121 LQ-KCNGGIKIKSKLDLMIESRPLLHGVAE 149

[Close]

BLAST of Cp4.1LG16g02710 vs. TAIR 10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 157.1 bits (396), Expect = 1.1e-38
Identity = 81/150 (54.00%), Postives = 106/150 (70.67%), Query Frame = 0


Query: 1   MSSVVAKSNKIRSIVRLRQMLQHWRKKARAAA--SRAPPTDVPADHVAVCVGSGCRRFIV 60
           M+  + K +KIR IVRLRQML+ WR +AR ++  SR  P+DVP+ HVAV VGS CRRF+V
Sbjct: 1   MAGGLGKCSKIRHIVRLRQMLRRWRDQARMSSSFSRCVPSDVPSGHVAVYVGSSCRRFVV 60

Query: 61  RASFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIK 120
           RA++LNHP+ R LL QAEEE+GF  +GPL +PC+ESVFEE IR I+RS+   S R +   
Sbjct: 61  RATYLNHPVLRNLLVQAEEEFGFVNQGPLVIPCEESVFEESIRFISRSDSTRSRRFTCPD 120

Query: 121 DLQRRCD-KDVRKNLEYLGESRPLLYGFAD 148
           D Q+ C    +R  L+   ESRPLL+G  +
Sbjct: 121 DFQKNCHVVGIRSKLDLWIESRPLLHGVTE 150

[Close]

BLAST of Cp4.1LG16g02710 vs. TAIR 10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 149.4 bits (376), Expect = 2.2e-36
Identity = 78/148 (52.70%), Postives = 104/148 (70.27%), Query Frame = 0


Query: 1   MSSVVAKSNKIRSIVRLRQMLQHWRKKAR-AAASRAPPTDVPADHVAVCVGSGCRRFIVR 60
           M+  + K +KIR IV+LRQML+ WR KAR ++  R+ P+DVP+ HVAV VG  CRRF+V 
Sbjct: 1   MAGGIGKCSKIRHIVKLRQMLRQWRNKARMSSVRRSVPSDVPSGHVAVYVGRSCRRFVVL 60

Query: 61  ASFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKD 120
           A++LNHPI   LL +AEEE+GFA +GPL +PC+ESVFEE IR I R     SSR +   D
Sbjct: 61  ATYLNHPILMNLLVKAEEEFGFANQGPLVIPCEESVFEESIRFITR-----SSRFTCTDD 120

Query: 121 LQRRCDKDVRKNLEYLGESRPLLYGFAD 148
           L++     +R  L+ L ESRPLL+G ++
Sbjct: 121 LKKNRHGGIRSKLDLLMESRPLLHGVSE 143

[Close]

BLAST of Cp4.1LG16g02710 vs. TAIR 10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 144.1 bits (362), Expect = 9.3e-35
Identity = 77/149 (51.68%), Postives = 106/149 (71.14%), Query Frame = 0


Query: 5   VAKSNKIRSIVRLRQMLQHWRKKARAAASRAPP-TDVPADHVAVCVGSGCRRFIVRASFL 64
           + K+NKI S+VR+RQML+ W+KKA   +S   P +DVP  HVAV VG   RR++VRA  L
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHL 60

Query: 65  NHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSS-----RSSSIK 124
           NHPIFR+LL++AEEEYGFA  GPLA+PCDES+FE++I ++ R E ++SS      +++++
Sbjct: 61  NHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAATLE 120

Query: 125 DLQRRCDKDVRKNLEYLGESRPLLYGFAD 148
           DL+R     + KN     ESRPLL G A+
Sbjct: 121 DLRRCSHVGLAKNNV---ESRPLLPGIAE 146

[Close]

BLAST of Cp4.1LG16g02710 vs. TAIR 10
Match: AT4G34750.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 144.1 bits (362), Expect = 9.3e-35
Identity = 77/149 (51.68%), Postives = 106/149 (71.14%), Query Frame = 0


Query: 5   VAKSNKIRSIVRLRQMLQHWRKKARAAASRAPP-TDVPADHVAVCVGSGCRRFIVRASFL 64
           + K+NKI S+VR+RQML+ W+KKA   +S   P +DVP  HVAV VG   RR++VRA  L
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHL 60

Query: 65  NHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSS-----RSSSIK 124
           NHPIFR+LL++AEEEYGFA  GPLA+PCDES+FE++I ++ R E ++SS      +++++
Sbjct: 61  NHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAATLE 120

Query: 125 DLQRRCDKDVRKNLEYLGESRPLLYGFAD 148
           DL+R     + KN     ESRPLL G A+
Sbjct: 121 DLRRCSHVGLAKNNV---ESRPLLPGIAE 146

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g02710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA49	3.1e-11	48.44	Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S...	[more]
O65695	3.1e-11	37.14	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
O64538	2.0e-10	39.08	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S...	[more]
Q9SGU2	3.5e-10	47.54	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]
Q9LTV3	3.5e-10	42.65	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 S...	[more]

BLAST of Cp4.1LG16g02710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512602.1	3.58e-99	100.00	auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]	[more]
XP_022986631.1	8.43e-98	98.65	auxin-responsive protein SAUR50-like [Cucurbita maxima]	[more]
XP_022943918.1	1.70e-97	97.97	auxin-responsive protein SAUR50-like [Cucurbita moschata] >KAG6571069.1 Auxin-re...	[more]
XP_038902037.1	4.53e-85	85.91	auxin-responsive protein SAUR71-like [Benincasa hispida]	[more]
XP_004147056.1	6.88e-80	80.54	auxin-induced protein X10A [Cucumis sativus]	[more]

BLAST of Cp4.1LG16g02710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JBR0	4.08e-98	98.65	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111484316...	[more]
A0A6J1FXH8	8.24e-98	97.97	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114484...	[more]
A0A5A7TQK8	4.73e-80	79.87	Auxin-responsive protein SAUR64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3C5H3	2.53e-79	79.87	auxin-responsive protein SAUR64 OS=Cucumis melo OX=3656 GN=LOC103497270 PE=3 SV=...	[more]
A0A0A0LM48	3.34e-79	80.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G257100 PE=3 SV=1	[more]

BLAST of Cp4.1LG16g02710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19840.1	1.2e-42	58.67	SAUR-like auxin-responsive protein family	[more]
AT1G75590.1	1.1e-38	54.00	SAUR-like auxin-responsive protein family	[more]
AT5G10990.1	2.2e-36	52.70	SAUR-like auxin-responsive protein family	[more]
AT4G34750.1	9.3e-35	51.68	SAUR-like auxin-responsive protein family	[more]
AT4G34750.2	9.3e-35	51.68	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 16..102 e-value: 8.9E-28 score: 96.3
None	No IPR available	PANTHER	PTHR31374:SF183	SMALL AUXIN-UP RNA-RELATED	coord: 6..144
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 6..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g02710.1	Cp4.1LG16g02710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin