Cp4.1LG16g01800 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g01800
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	cleavage and polyadenylation specificity factor subunit 3-II
Location	Cp4.1LG16: 3910921 .. 3926925 (-)
RNA-Seq Expression	Cp4.1LG16g01800
Synteny	Cp4.1LG16g01800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAACCTTCGACGTAAATAAATTTGATAACTATTTACTTTTTAAACCCAATCTCACATTCGACGCCCCGTTGGCGCCGCCGCTGCACGCAACACGTCGCTCGCCGCTCGCAGAGCACTCGCCTGGTAGCTACCCTCCCTCTCCATCTTCAATCTTCACTCGGCTCTTCTTCCCTTACAGTCGCTGTCGCCTCTCCCAGCTCAGTGCCGCAGTCGCCGTTTTTCTCCACTCGTACTGCTGACGTCTTTTTATGCTCTGGCCTCCTGGTCTCTCTTCGCTTGGGTGAGGGCTGGCATTGTGTAGAAGTTTATCTGAGTTGAAGGACTACTGCAATGACCATCGATTGTCTCGTTCTTGGTAATCCTTTAGCTTTTTCTTATGTATTCTTTATCCAATTACGGTTTCCAACGTTGATTTTAGTCTTTATCGTCTTTTAGGCGCTGGGCAAGAAGTTGGGAAGAGTTGTGTGGTCGTCACAATCAATGGAAAGCGAATTATGTTTGATTGCGGCATGCATATGGGTTATCTAGACCATCGTCGATATCCTGATTTCTCTCGCATCTCTGCATCTCGCGATTACAATACTGTTCTCTCCTGTGTCATCATTACACACTTGTATGATGTTTTTTTGTTTGTTATAGTAATCGATAAATCTCTGTTACATTACATTACATTGCTTTGTTTTTATTTGTCTTTTCTTTGCTAATTTGCAGTCACCTGGACCATATAGGTGCTCTTCCATACTTCACCGAAGTTTGTGGCTATAATGGACCCATTTACATGACGGTACATATCATCTAATACACATGCTCATAGATGTTTGTCCTTTTGGTTTCACCATGGCCATGTTAGATTGTTTTTTGCATACAAAATGTTGTATGAAGTCATCCAAAAATAAATAAATAAAAATAAAAAAAAATAAAAAAAATAACACACGGATTATAGTCGGAGAATTCATATATAGCTTTCTTTCCTAGACCTAAATTCAGAGGTATAAAAAAACTTTGGAAGAAGAAGAGCTCACACAAAGTATGGTTGGAAAAATTTGAATCCATGTATAGCTTGCTTCCTTTGGCCTCGGTGCTGCCTTCTTTAGACCCTTCTTCTTTGCTTTCTTTAGGTTTCCAGCGTCCTTTCTCTGATAGAGAGGCGTTGGAAGTGGTAGGCCTTCTTTCTCTCTTTCAGGACGAGCATGTAATTCTAGGGAGTAGGGATGTTAGGATTTGGTCCCTTGATCCTTCTAAGGGCTTCACTTATCATTCTTTTTTCTCAAATTGTCTTCCCCATCTCCCCCTTGATGCCCTTGTTTGTTTTCTCCTCTCTCTCTCTGAAAGGTTAATATTCCAAGGAAGGTTGAGGTGTTTGTGTGGCAGGTTTTACATGGGTGAGTTAATACCATGGATCGCATGCAAAGACTCTGTTCTTATTGTTGGATGATGGAAGTCCCACATCGGCTAATTTAGGGAATGATCATGGGTTTATAAGTGAGGAATACTAATTCCATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTAGGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTTGTGTTCGTCTAACACTTATGTTTTATTCTCGCAATTGTGTATTCTCGGTAGGCATGAAGAAAACCTGGATCATTTTTCTTGGAATTTCCAATTTTCTGACCACCTTTGGAGTATTGGTCGAGTGCGATTGCTGTTTGTCTCAGGTGGAGGAGGTGCTTTTCAGTTCTACTTTTAGGGAGAAGGGTAAATTTTTTTGACATGCTAGCTTATTTGCTAGTTTTGAGTCTTTTGGATTGGGGGGAACAATGGAACTTTTAGGGAGGTGGAGAGGTCGGGTGAGGGTGTTTGCGAGGTGTCTAGGTTTAATGCATCATTGTGGGCGTTAGTCACTAGATCTTTTTGTAATCATGAGCTTGACATTGTTTCTTTTGGCTTTTTGGAATTATGAGCTTGGTATTGTTTTTTTAGATTGATGTAATTTTCTATAGTTACCTTTTTTTTTGTGTGCCCTTGTATATTCTTTCATCTCTCTAGGAAAGCGTGATTTGTTACCAAAAAAAAAACTTTAGACTCTTTAGTCCTATAATGAAGTTTATTGTCAATTTTGTTTTCTTACACGTTGATATGGGCATTGAAGCTCTCTTTACTTCCCTTTGGCCGCAGTATCCAACATTGGCTTTGGCTCCTTTAATGTTGGAGGACTACCGGAAAGTGATGGTTGACCGAAGGGGTGAAGCAGAGCAATTTAGTAATGATCATATTATGGAGTGCATGAAAAAAGGTAACTGAATTATGTCAAGTTCATAAGTAGTATGTAACTAGTCTCTCTTGGTTGGAAATGTGATTGTTTAGGTGACCAAAGTATAAGCATTATCTCTATTTTTTAAAACGGATGAAGCATCAAAGTGCTGTGATCCATTAGGAGGATGTTACACACGTCCATGTTGTTTATCTCTCATACAATGTAGATATTACAACTATGTTGTGATAATTACTTTGTTTCCTTCCATTTCCCATCCAATTTTGTGGGGTTCTAGGTGAACCTTCCCTTTTTTAACCCAGTGCCTTCACCAATGCCTTAGATACTATGTTCTCACAACTTTTTCCATCAATGATATTGTTACACACGTCATTACGTTGTATAGTTAGCTCTCTTTAGGGGTATGATTTATGTTCTTGGTTTACTTGGCGTGCTTTGTACCTTTTGTCTGATTCCAAATACTTTTGGATTTGGACATCTTGTGTACCTCTTATTTTTCATTTATTTCTATATTAAATGAAACTTGTTCCTTTTTTTTTTTTGCTTGTTTTCGTTCTACCTTACAAACACAGTGTAGAAGGAGAAACCTTTGACTGAATATGGAAAACTGCTATTTTATGAGATCCTTACCCTTCGTGTTTAACTAATTGTTCATCATTTGTGTTTGTACCCTTTTGCTTCATTTGATGATTGTTCTTGCTCAGATTGCGTTTTAGACTGCACTATTGATAGTTGTGTATGGCTTAACAATTAAGCTTCTGTGGGTACCTCTTATTTTTTTATTCATGTATTTGATGTACATCTTCAGTATATTAAGATTATCTGTCATTGATCTTGATTCACCTGCAGTTATACCTGTGGATTTGAAGCAGACTATACAGGTTGATGAAGATCTTCAAATTCGTGCTTACTATGCTGGACATGTAAGGCCTCGTTGATATATTTAGTATTCTTATTTTGCATCTCCTAGTTAGCTTCATTTAAAGCTGGCTGACAATCTTCCTCATCGGTGGTAGACATGTCCTATGCATTGTTGCTTAATTTCATCCTTGTTTCATTATTCAACTTGATTTTCATAATGTTATTAAGCTTCTCTCTCTCACTCTTTGTGTTTACGCAACAATATGTGCACTTATGTAAATGCTATAACAGTAACGATAGCAACCTTTATATTAAATTAGGTTGTTGGGGATTTTGTAACCTCCCTAGTCCTCTGGCCTTTAAACTGCATACACTGATTGGTTTTAATTCATCTCCTCCATATTAAAAGAAAGAAAGAAAGAATTGCAATGCACGAGCCTTGAAATTCTCCTGTATTTTCAATTTGAAACTTTTCAATGATGATATTATTTTTATTTTTCTCTGCTAATTTCCTCTTTTTTTGGTTTATTGTTTCCCNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATACTTTTTCAGTTGGTAGGCAGATCTGGAAACTCAATGAACTCTTCCAAATAGAAAAAATTACATAATTCTGAAGTCTGTGCATTCTCTGGAATTCTATTTAGTTTCCTTAGAATATTTTTGTAGGTGAACGTGAATGCGCATGTTGGACATAGGGTATTTATTTCACAAAAAGTTAATAGACGTAAATGAGAGGGGTAACTTTGCTAAGGATGTATAGTAGTTTGAGTTTGACATATTGATATACCTAATTCTATCTGATGTGTCAAACAAATGGTAGTTTGAACGAAAAATTGTAACTTATTACTTGTATGTGCTTTTTAAATGGAATTTCTTTTGCATCGTATATGGGCATGCATGAATCCAGTAATTAGTTGCTTGCTGTGTGTATGCATCTCTTTATCAATCTACTATTTTGCAAATTGTGGAACCCCAAATTGTGTCGTACCTTTATCCCCAGTTTAAATATAATCCACAAGCAACTTATGCTTGAATTATCGCCCAGAGTTGTGAACTTAGTTCTAATATTGCTACGTCATTGTGCCTACTGTTTGTGCTTACTTGACTTATTCTCAAAGCTTTTTCTTGTTGCTTCCACGAACTTTGTCCATCAACACAACTGTAATGTGGAATGTGCATATTTACATTTTAATCATGTTCTTAAGGTTTTAGGAGCTGCCATGTTTTATGCTAAAGTTGGAGATGCTGCTATGGTATACACAGGAGACTATAATATGACACCTGATAGACACCTTGGAGCAGCTCAAATCGATCGAATGCAATTAGACCTTCTAATAACGGAGTAAGAAGTTCAAAGAACTATTTTACTTGTTATAGTGTTGGTTGTGCACCCTTTTAATCTTCAGCTATGAAAACAATTTCTTCCAACCCTTGATTTCTCTCTCTGTAAGGGGAAAGTTGTATCGTAACATTGAATCCATCATCTAACTTTGGCAAGAAAGTTATGGTTTCAATTTTTTGATCTTCTAAGCATAACTTAACTAGTTAAGATATTATATATCTATTTGGTTCGAATATCCACTCTCACGTTGTTGAACTCAGAAGATAGGGCAAAAGAACCATTTGTACTTAAAAGAGAACATGGGTAATGAAAATTTTAAATAATCCCTTAGGCACATAAAAAACAAGGAGTTAAATGACCATTAAAGAAAGAAGCATATTGTAATAAAATCATACACCTATGATTTATTTGCATGCTGTACATGAAAAAGAATGACGCTCATAATGAAGCAACATCAAATGGGTTGAGATTGGACATAAAATAAATGGGTTTTTATACTCCCATTATGTTGGGTTGTAAATGTATATTAAACTCAACTGGTCCTGATGTAGTCCATATCTCGAGGGGTGGATTTTTTTTTTTTTTATATATTTTATTTTATTTTACTTCTAGGCTTTTGTTTGTATTTTGTCAATGAATGGTTTAGTTAGTAGTTAATTGGGCATTAGTTTGACGGTTCAGAGTATTTTGAAGAACTAGCCGTTGCTTGTAGATTGTTTGTTAGATTTATAGCTGTTGGGGCTTGACTTGTAGAACTAAATTCTAGTTCCTTTTTTTCTTAAGTTGTCAACAAAAAGATGAAGATTTTTTTTTTCTATTTGCTTATGGTCTTCTAGTTAACATAGGAGAGTTTTCTGTTCCTGATGCCTTTTCATCCGTAATTCAGCATGTGTATTCACTGCAAAGTATTTCTATTTTTAATCTTCCAATGTTTGTCTTCCGCAGGTCTACATATGCAACAACAATCCGTGATTCCAAATACGGCCGTGAGAGAGAATTTCTTAAAGCTGTATGTATAAATTAATTTATTAAAATCATTAACCCAGATTTGCCTTTTCTGCACCTCTTTATATTTTTAATTATAAATCTGATATGTTTGTTTTTCATTCATTGTCATGCATACTGACCTAATAGTAATTCAGGAGCCAGGACATAATTAAAGTTTAGCGAAGTTGCTCATGTTCTAATACCAACTTGGCATATTGTTTGAATGAAATATTATCTGTCTCTCGTTTGAAGATTGCAAAATCTTCTATTCTGTTGTAGGTTTTATTTTGTGATGTTTCAGGACTGTAGGTTGGTTGATTCCTATACTGTGTTTATAGGTTATTACAACTTTTCAGATGATTATTTGTACAGGGTATTGCATGTGAGAATTGTAGCATCATAGTTTAGGACCCATGATATAAGATATAAACTGGTAATGAATGGCTATTGGGCATTGGTTAGTGACCTAAACCCATCATTAACTCTTAAGTTCCTTAATAGACACTGAATTATTTTATCTTAAAAAAATTCATAACGTTTAGCCATGAAAATGATTTGAAACAAGATATTTTTCCCGGATGATTTGGTATAGGTTCATAATTGTGTGGCTAGTGGAGGGAAGGTCCTTATTCCTACTTTTGCACTTGGACGGGCTCAGGTACTTTGCTAAATATTGTGTAGCTTTATATCTTTATCTGCAAGCTGCATCTTTCATGATTAATTCATGTTATGTAATACTGTTACAGTTATAAAATTTTCCATTATGCGCAGGAACTCTGTATCTTGTTGGATGACTATTGGGAGCGCATGAATCTAAAGATTCCAATATACTTTTCAGCAGGTGTCCTTTGAATAATAAGTTCTCATTTCATCCTTATACTAGTAGATATGTATTAATACATCTTAGGCAACTCTTCAGCTTCCAGTTTCCTTTTCATGATTTCCATCTGCCTTGTAAGTCCATGATCTGCTTTGATAATCTTCTGCCCACAATTTGCTGATAAAGTTAGATGCATGTTAGGCATTTATCGAGAACTGCAATTGCTGAGTTGCTATGAGTGATTATTGAGTGTTAGGGCGATTAGAGCATTTCGTGATGGGCTAATCCTTCTATTTGTCTCACAATTAATGGTGAGCATGGGTGATGAATTTATGTTGTCATTGAACTAGATTCAAGCTTGAGATACACTTGTTTGGTGAGTCCAAGCCATCTTTCAATGAGCAATGTGTTTCAAATCTTTATAAGCATTAAGCACTAATCAACTTGTCTGGATTATTCGAGTTGGCGATCTTTTTTCTTCTATAGATGAGGCATGTGGTGAGAGGAAAACCAGGCTGAATCAGATTTCAGCATCATCTCATAGACCACCGTGAGAAAGAGTTGATAATGATAGCTACTAAATACGTTTCTTTAAAGTTGTTAGGAATTGCTTTGTTTCATATACAGTTCTTCTCACTCTGTTGTTTCCTATAAGTATTGCTTTTCTCGACTTTTATGTTCTTGTGTTCATTTTTCTGCTTTCAGGTTTGACTGTTCAAGCTAATATGTACTATAAAATGCTCATCAGTTGGACCAGCCAGAAGGTTAAGGAGACATACACGACAAGGAATGCTTTTGACTTTAAGAATGGTATGTCATTCACATGTTTCATGTTTTCAGGATTGGAATCAATTGATGAACTGCAATAAAATAAATGTTATTATGTTGAGCATATTTGCTTACCAGGGAAGTGATGTGGGTACCCCTTTCAAAGTGGCAGCCTAGGTGGGAACATTTATCTGAGTATTGAGGCTTCTTACCTGAACAATGAATAAAAGGAGAGGACATTTAAATTGGAACCAGAGATGTTCATAGGGTGGGGGCCAAGGCCTCCGTCCCCGCCTCCTATTTTATTTCACATTCCCGCGAAATGTCTTATTTATTTTTGCGGGGATTGGGACGGGACTCCATGGGGGAAATTTTTCCCATCTTTTATATATATTGTTATTAAAAATATCCATTTCAAAGAATTTTTTAATGGATAGTTTTCCTTTTCCAACATAATTTATATTAAAAAATGAAAAACATCCTAATAAATCCAATAATATTTCATAGGCAAGATAATAATATAATAATATAATGTTTAATATAATTTCAATATTACAGCATAGTCTTTTACACTATATATATAATTTCCATCTCTGGCCCCGTTTAGCTAACAAGAAAACTTCTCTCCACTTCCTCTCCCACTTTCGGGTTAATTGGAAGAGATTGTTATGTCAAACTTACTTCCATTGCCCAAATCACTCATTTAAAATAATGATATTTGACAATAATGTAGAAGTTATTTTGAAAAAATCCAGACACTCTTATGTGATTCTAGAAGTAGTAGATAGGAGGTGATTTTGGTGGGTGATTGACTAGGAATCAGTTACAGGTATAATGGCTTTAGAAATCTGAAGTGAATTATTATTAAATGCCTTTTATAACATCACTTATAATTAAATCATGGTAACACTTATTCTAAAGTCACTTTTAACCACATAGCAAGTGTCATATTTTAACCACTGACAAACTTGCGTTACATTTTGCAGTTCAAAAGTTCGACCGTTCTATGATTGATGCTCCTGGGCCTTGTGTTCTCTTTGCTACACCAGGGATGATTAGTGGTGGGTTTTCTCTTGAGGTTTTTAAGCGCTGGGCACCTTCTAAATTGAATCTTATCACATTACCCGGGTATTGACTATGGCTACTCTCTTTTGACTGTCGCTTTGTATTCGTTAGTCAAGTATACTTTTGCAGGTTGGTTCTTTGACAAACCATAAAGTTGGATAACTTCTGTGACTGAGCTTTTCTTTCACTTTTGCAGCTCTTTTTTTTTTTTTTTTAATAATTATTCCAATTTTTGCTTATGTTCATAGTTTGTGTTTGGTCATGTTATGGTCTTTACTACATCCAAGCATAATGTGAAATTGCTATCTGAAAGCCATATTACTTAATCCCATGTAGGTATTGCGTGGCCGGAACTATTGGACACAAGTTAATGTCCGGAAAACCCACCAAAATTGATCTGGACAAGGACACCCAAATTGATGTGCAATGCCAGGCTAGTATCTATCAGCTTTACGTTGTTGTGTTTTCCTTTTTGAATATGATTTTTAGAATCGTTAATCCTCAGTTTCACTAGGCCTAAATTACATCTCGATTTGGATTTTAATGTTTCTTAGAGGTTCACTACTCAGTAGCTCTGGTTGATAGCCTTTTAAGACTGTTGTTTACCTTAGGGAAAACTAGGAATATAAAACAAACTTATAATGCATGGTGCTACGTGTCACAATCCGCGATGAGATTGTGCCTTGAGAAAGTCATCGAGAACGATGACTAATTTAAGTGGGGAAGAATGTCACAACCATACCATGAAGAAAGTAGGTTGTGACCCTCATGTGCAAACAAGACAAGGTGGCGACACGGTAGTGGTGCCCAAGTAGCCATGCGAGGGTCAAGACAAGACGAGTACCATGATGCGACCGAGGACGGTACATCATCTAACACACTATAGAGATGTGCATGAAAGATTAGCTAAGGCATAGGCAAGATAAAGACAACGATGTGACATGAGTGTTAGAGATAGGCTTGTTGAAGGGTTAGGTAGGGCCTCAAGCCTTAACCTCGAAAATCAAGNTGCTTTGTTTCATATACAGTTCTTCTCACTCTGTTGTTTCCTATAAGTATTGCTTTTCTCGACTTTTATGTTCTTGTGTTCATTTTTCTGCTTTCAGGTTTGACTGTTCAAGCTAATATGTACTATAAAATGCTCATCAGTTGGACCAGCCAGAAGGTTAAGGAGACATACACGACAAGGAATGCTTTTGACTTTAAGAATGGTATGTCATTCACATGTTTCATGTTTTCAGGATTGGAATCAATTGATGAACTGCAATAAAATAAATGTTATTATGTTGAGCATATTTGCTTACCAGGGAAGTGATGTGGGTACCCCTTTCAAAGTGGCAGCCTAGGTGGGAACATTTATCTGAGTATTGAGGCTTCTTACCTGAACAATGAATAAAAGGAGAGGACATTTAAATTGGAACCAGAGATGTTCATAGGGTGGGGGCCAAGGCCTCCGTCCCCGCCTCCTATTTTATTTCACATTCCCGCGAAATGTCTTATTTATTTTTGCGGGGATTGGGACGGGACTCCATGGGGGAAATTTTTCCCATCTTTTATATATATTGTTATTAAAAATATCCATTTCAAAGAATTTTTTAATGGATAGTTTTCCTTTTCCAACATAATTTATATTAAAAAATGAAAAACATCCTAATAAATCCAATAATATTTCATAGGCAAGATAATAATATAATAATATAATGTTTAATATAATTTCAATATTACAGCATAGTCTTTTACACTATATATATAATTTCCATCTCTGGCCCCGTTTAGCTAACAAGAAAACTTCTCTCCACTTCCTCTCCCACTTTCGGGTTAATTGGAAGAGATTGTTATGTCAAACTTACTTCCATTGCCCAAATCACTCATTTAAAATAATGATATTTGACAATAATGTAGAAGTTATTTTGAAAAAATCCAGACACTCTTATGTGATTCTAGAAGTAGTAGATAGGAGGTGATTTTGGTGGGTGATTGACTAGGAATCAGTTACAGGTATAATGGCTTTAGAAATCTGAAGTGAATTATTATTAAATGCCTTTTATAACATCACTTATAATTAAATCATGGTAACACTTATTCTAAAGTCACTTTTAACCACATAGCAAGTGTCATATTTTAACCACTGACAAACTTGCGTTACATTTTGCAGTTCAAAAGTTCGACCGTTCTATGATTGATGCTCCTGGGCCTTGTGTTCTCTTTGCTACACCAGGGATGATTAGTGGTGGGTTTTCTCTTGAGGTTTTTAAGCGCTGGGCACCTTCTAAATTGAATCTTATCACATTACCCGGGTATTGACTATGGCTACTCTCTTTTGACTGTCGCTTTGTATTCGTTAGTCAAGTATACTTTTGCAGGTTGGTTCTTTGACAAACCATAAAGTTGGATAACTTCTGTGACTGAGCTTTTCTTTCACTTTTGCAGCTCTTTTTTTTTTTTTTTTAATAATTATTCCAATTTTTGCTTATGTTCATAGTTTGTGTTTGGTCATGTTATGGTCTTTACTACATCCAAGCATAATGTGAAATTGCTATCTGAAAGCCATATTACTTAATCCCATGTAGGTATTGCGTGGCCGGAACTATTGGACACAAGTTAATGTCCGGAAAACCCACCAAAATTGATCTGGACAAGGACACCCAAATTGATGTGCAATGCCAGGCTAGTATCTATCAGCTTTACGTTGTTGTGTTTTCCTTTTTGAATATGATTTTTAGAATCGTTAATCCTCAGTTTCACTAGGCCTAAATTACATCTCGATTTGGATTTTAATGTTTCTTAGAGGTTCACTACTCAGTAGCTCTGGTTGATAGCCTTTTAAGACTGTTGTTTACCTTAGGGAAAACTAGGAATATAAAACAAACTTATAATGCATGGTGCTACGTGTCACAATCCGCGATGAGATTGTGCCTTGAGAAAGTCATCGAGAACGATGACTAATTTAAGTGGGGAAGAATGTCACAACCATACCATGAAGAAAGTAGGTTGTGACCCTCATGTGCAAACAAGACAAGGTGGCGACACGGTAGTGGTGCCCAAGTAGCCATGCGAGGGTCAAGACAAGACGAGTACCATGATGCGACCGAGGACGGTACATCATCTAACACACTATAGAGATGTGCATGAAAGATTAGCTAAGGCATAGGCAAGATAAAGACAACGATGTGACATGAGTGTTAGAGATAGGCTTGTTGAAGGGTTAGGTAGGGCCTCAAGCCTTAACCTCGAAAATCAAGGTTTCGAAGGGAATTTGGACATGCGGTTTTGGAGTCAAGTCTATCGATATGAAATATAAAAGTTTGCCCAATTTGGTGTCAATCCACTCAACACCGTATGCTGTTTACCACAATCATGTCTACACTCGCAAGATTGAAAATGTCTCAAAATATACTATAGGGGGAGACATGGTGTTAGCTCTCCACCACCTCTAAGCCCTGTGGCTTAAGCGAGCTACCTTGTGGCATATATGTATGTCATAGTGAGGGCGAGTGTTACAAGACTAGTGTCTCCGACAACTTCCTTTGAAATGGATTTTTTCAAGGACAATGTCGGACAGTACAGGTGTGCCAACATTGTGTCCTAGCCCATGTGTCGGAGGTTGGATTAGACACCTGTTATCCGGTACGAAGTTCGTAAACGATAGGACATGGACACAGGAGGGTTTAATGCCTCGATAGAACCCGGATGGATGGATGTTTGAGATGTCTTGATATTATGAATGACACGTCGACCCGTTCTTGATGGCATGATTGAGTGAGTTGTGATGGATTACGACACCATGTGGCTTGGGATGATGTCAAGACATATGGGTCATGTTAATTGGGAACCTAGAGGATGTGAGATGCGATGTTGCATTGAGAGACCTTGGCCTCGAGTAGAGGCAAGGTCGAGCCGAGTGACTTGGCCTAGTGTAGAGGCAAGTCGGTTGGGTCGCAGATGATTGAACACTCGCAGGCGGCGTGGGTGGCCGAACAAGCTTGGATTCTGCAACTTCGTGTTCGGTGGGCAAAGATAAACCTTGCCTAAGGTTCGACAAGCCTCAAAGCCAGACAAAAAACGAATATGGGGCTTAGGTTTTTATCAAGGTTGGTCGTGAGCTTGTCAAGATCTCGACAGTGCATGGTTGAAAAAGTACGACCATGATGGTTGGTATCGGAGCTACACTTTGTGTGTCTAATCGGACAAGATTGTCAGGAAGAAGAAACTGAGGGTCGAATGAAGGCATCACAAGCGTGTCAAGAGTGTCAGTGTCGACCGAGCAGTTCTATTGTCAAGGATCCTAAACAAATCATGGGTTGAAGCCAAGACTCCCCCAAGTCATTAGTACCGTGTGTTGATACCTTAGTAGGGGGAGTTCTACCCGTCAAAAAGATAAACCAAGCTCATTTGCTAAGGCTCGAGGTTTCAATTGGGCAGACAGATGAAATAGGTGTAACAAGTCGGTTCTTTCCAAAGAGCTATTTTCATGAGAGGAATAATGCTAATGGTTGCAAGGAAAGAAGTTGGAGAAGTTGGAGGTCAGTTGAGACATGCGCCACCCAAATGCCACGTTGTGCACAACGCAAGTCTTTATGGGGAAGACATTACTGCAAAGAGACAGGCAAGTTTGAGTGGGGAGAGCCCGAGAGAATGCGTTGCTCACCCAGTGTGAGTGCTCCAAGAAGTGAGCACAAGTGAATTCCGCCAACCCTTCTTGCATAAGGTGGGTGACTTCACAGCAGATGTCAAGATGAACATTTGTTCTAGTAGGAGCACTAGGCTGGATATGAAGGCAACAGAAGAATGAAGCTATGGGAAGACCGAGAGAAGTGAAGGTGGCCAAGAAAAGAGTTGGCTGAAGGGTAGTGCCAACAACCTAAAGGATTGTGTCAAAAAGCATGGACTTTGCTTCAATGAGGGATGTGACCACGACGAGGAAATGTTGTGGTTGGGCTTGCGAGCCCCACCTTGAGGGGTGCACCAATTTATGCGACTCAGAGACACGCAAGTTGAGGCAAAAGTGGCCATGATTGGGGCAAACACCCTCTAGTGGATCGGTGAGTGTCCCTGGCGAAGTTCGAAGGTAGGGCATCGTAAGCCCAGCTTCACCCATGCCATGGCAAGGAAAGCCCATAGTTTGTCTGGTGAGTGTCCCTGACCAAGCCGGAGATAGACGTCGTAAGAGCCAGCCTCACCCACAGCTATGCCAATATTGAATTGCAGTGTCGGCAGACACAAGTCTCAGTGGCGGAGTCCTAGATGGGAGAAAAAAAGAATAGGTCTGATAGTGGGATAGCCCATAGATAGTGTGCACAAGTTTTTCATATTCGATTTGAAGCATGTTTATTTCCGGCAAGTCAGTTAGCAAGCAGTCTAAACTCCGCTACCATGAGAGTTGGTACCACGAAGAGGAATGTCGTGGTTGGCTTGCGAGCCACACCCCATGGAGTTTACGGTTATGTGCTGCCTTTTTTTTAGAAGAGAGAATGTTTACATAGAGTACGCTCTCTAGAAGATTTGTTGTAGAGAGTATGCAGATTGGCCCAGAGAAGTGTCAAAGTTAAGTTGGGGCAAGTTCATCAAATAATTAACCAAAGAGAGTCGGGAAGTGTTGCCGCATGACAAAGATGAGTCGGAAGCATCAACTCGAATTTGTCCCCAAGCTGACCAAGAGGCATCAATAAGATAAGTATTATGACAAATGAGAAGTTAGATACTTAGTGAATTTATACTCATTTGAAGCACGATCTGTTCCAGCAGGTCAAGTCAGCAACCAGTCCAAAGTGGGGGGAGAATGTCACAATCCGCGATGGGATTGTGCTCCTAGAAAGTCATCGAAGACGATGACTAATTTAAGTGGGGGAGAATGTCACGACCATACTATGAAAAAAGTAGGTTGTGACCCTCACGTGTAGACAAGACAAGGTTAGGACACGATAGTGGCGCCCGATTGGCCACGCGAAGGCCGAGACAAGATGAGTGGCATGATGCGACCAAGGAGGACGGTCCATCATCTAACACACCATAGAGATGTGCATGAAAGATAAGTCGAGGCATAGGCAAGATAGAGGCAACGATGTCAACATGAGCGTCAAAGATAGGCTTGTTGAAGGGTCGGGTAGGGCCTGAGCCTTAAACTTGAAAGACGGGGTTTCGAAGGGAATTTTCACATGCGGTTTTGGAGTCAAGTCTGTCCCTATGAAAGCTCACCAAATTTGGTGTCAATCCACCGAACAAACTCTCCATGATACCTTATGCCCGTTCGCCAAAATTATGTCTTACTCACACCAAATTGAAAATGTCTCAAAATGTACTAGGTGGGGAGGCATGGTGTCAACTTTCCAAACCAGGTTATTTGGATGCATCTTATTTGGGCTTTCTTATGGACAATCGCCTCTTCGATTAAAAGGGAAGCATTTCACTGTAAATCCGGAAACATTATTGGTACTTTGAGTTCAAAACGAAACATACGCAAATGAACACCGTTAAAGTTGACCTGGATGAACTTCTTTTTTTCTTTTATTGTGTATATATATATATATATATATATATATATAAATTTTTAGTCCTGTAATCATTCTATTAAATGTTCCTGACTATATATCACTATGTTTCATCCCAGATTCACCAACTGGCATTCAGCCCACATACTGATTCCAAAGGAATCATGGATCTTGTGAAGTTCCTTAGTCCCAAGCACGTGATACTTGTACATGGAGAGAAGCCTAAAATGGTTACTTTAAAGGAGAGGATTCATTCAGAACTGGGAATCCCATGTCATGATCCTGCAAATAACGAGACTGTATCCATTTCTTCAACTCTTTCTATCAAAGCAGAATCCTCAAGCACGTTTATTCAGAGTTGTTCAACTCCCAATTTCAAATTTTTGAAAAGAAACTTGAATGATAAGATTAATTCAAAAGAGTTAAGTTCGAAAGAAGGAGGAACTTCAAGCATGTTTATACGCAGACGCTCGAATCCCCATGTCAAGCATTTGAATAGAAATCTTGACGAAAAGTTTGATTCTAGTTTAAGTTGTGGTCCAGAGATAGAGGTAAGTGATGATAGAGTGAATGAAGGGATCTTGGTGATGGAAAAAGGTAAAAAAACAAAGGTGGTACACCAGGATGAACTATTACTTCTCTTGGGAGAACAAGAGCATGAGGTTAGGTTTGCTAACTGTAGTCCTATATATTTTGGAAGCTTAGATGATACCCATGTCATAGTTTGCATATCTAGAAAATCTTTATGGCTTTCCCAGCTATCTTCAAAGCTTTCAAGTGAACTTTCAGACAGGAATGTTCAAAATTTTGGGGAGTATCTTCAAGTTGAATCATTTACACTGTCCATTTGCTCAAAGGAAAGTTGCCCTTACCGAACTACAAACAGAATTGAAAATGAATCTGCTGCAGCATTCTATTGCTGTAGTTGGCTAGTCGCAGATGAAGTCCTCGCATGGCAAATCATTTCCATCTTGGAGAAGCATGATCTCAGTTCAACATGAAGGGGCCTATTATGCATGGTTTCCTTACATAATTAACATGGAAGCTGTAATTCTACATGAGGTTAGCTCAATTGATGACTTGTTTGACAAAGGAAATGATTTGCTTATCACGAGTACTCGGGGTTGATGTTCATGTTCATAGTCGTATACCAAATCTGGAGGTTTAAGTTACGAATCATTGGTTCTGAAAGATTTGAATATGGTTGAAACTGGCATCGATGTTAATAGGTTTTTTTTTTTTTGTTTATTTGCTCTATAGTCCCATTGCCTATGAAGAGTTCATAGTTTGTATTTCCGTTATATTTCTAGCTAGGTGTACAGACAA

mRNA sequence

AAAAAAACCTTCGACGTAAATAAATTTGATAACTATTTACTTTTTAAACCCAATCTCACATTCGACGCCCCGTTGGCGCCGCCGCTGCACGCAACACGTCGCTCGCCGCTCGCAGAGCACTCGCCTGGTAGCTACCCTCCCTCTCCATCTTCAATCTTCACTCGGCTCTTCTTCCCTTACAGTCGCTGTCGCCTCTCCCAGCTCAGTGCCGCAGTCGCCGTTTTTCTCCACTCGACTACTGCAATGACCATCGATTGTCTCGTTCTTGGCGCTGGGCAAGAAGTTGGGAAGAGTTGTGTGGTCGTCACAATCAATGGAAAGCGAATTATGTTTGATTGCGGCATGCATATGGGTTATCTAGACCATCGTCGATATCCTGATTTCTCTCGCATCTCTGCATCTCGCGATTACAATACTGTTCTCTCCTGTGTCATCATTACACACTTTCACCTGGACCATATAGGTGCTCTTCCATACTTCACCGAAGTTTGTGGCTATAATGGACCCATTTACATGACGTATCCAACATTGGCTTTGGCTCCTTTAATGTTGGAGGACTACCGGAAAGTGATGGTTGACCGAAGGGGTGAAGCAGAGCAATTTAGTAATGATCATATTATGGAGTGCATGAAAAAAGTTATACCTGTGGATTTGAAGCAGACTATACAGGTTGATGAAGATCTTCAAATTCGTGCTTACTATGCTGGACATGTTTTAGGAGCTGCCATGTTTTATGCTAAAGTTGGAGATGCTGCTATGGTATACACAGGAGACTATAATATGACACCTGATAGACACCTTGGAGCAGCTCAAATCGATCGAATGCAATTAGACCTTCTAATAACGGAGTCTACATATGCAACAACAATCCGTGATTCCAAATACGGCCGTGAGAGAGAATTTCTTAAAGCTGTTCATAATTGTGTGGCTAGTGGAGGGAAGGTCCTTATTCCTACTTTTGCACTTGGACGGGCTCAGGAACTCTGTATCTTGTTGGATGACTATTGGGAGCGCATGAATCTAAAGATTCCAATATACTTTTCAGCAGGTTTGACTGTTCAAGCTAATATGTACTATAAAATGCTCATCAGTTGGACCAGCCAGAAGGTTAAGGAGACATACACGACAAGGAATGCTTTTGACTTTAAGAATGTTCAAAAGTTCGACCGTTCTATGATTGATGCTCCTGGGCCTTGTGTTCTCTTTGCTACACCAGGGATGATTAGTGGTGGGTTTTCTCTTGAGGTTTTTAAGCGCTGGGCACCTTCTAAATTGAATCTTATCACATTACCCGGGTATTGCGTGGCCGGAACTATTGGACACAAGTTAATGTCCGGAAAACCCACCAAAATTGATCTGGACAAGGACACCCAAATTGATATTCACCAACTGGCATTCAGCCCACATACTGATTCCAAAGGAATCATGGATCTTGTGAAGTTCCTTAGTCCCAAGCACGTGATACTTGTACATGGAGAGAAGCCTAAAATGGTTACTTTAAAGGAGAGGATTCATTCAGAACTGGGAATCCCATGTCATGATCCTGCAAATAACGAGACTGTATCCATTTCTTCAACTCTTTCTATCAAAGCAGAATCCTCAAGCACGTTTATTCAGAGTTGTTCAACTCCCAATTTCAAATTTTTGAAAAGAAACTTGAATGATAAGATTAATTCAAAAGAGTTAAGTTCGAAAGAAGGAGGAACTTCAAGCATGTTTATACGCAGACGCTCGAATCCCCATGTCAAGCATTTGAATAGAAATCTTGACGAAAAGTTTGATTCTAGTTTAAGTTGTGGTCCAGAGATAGAGGTAAGTGATGATAGAGTGAATGAAGGGATCTTGGTGATGGAAAAAGGTAAAAAAACAAAGGTGGTACACCAGGATGAACTATTACTTCTCTTGGGAGAACAAGAGCATGAGGTTAGGTTTGCTAACTGTAGTCCTATATATTTTGGAAGCTTAGATGATACCCATGTCATAGTTTGCATATCTAGAAAATCTTTATGGCTTTCCCAGCTATCTTCAAAGCTTTCAAGTGAACTTTCAGACAGGAATGTTCAAAATTTTGGGGAGTATCTTCAAGTTGAATCATTTACACTGTCCATTTGCTCAAAGGAAAGTTGCCCTTACCGAACTACAAACAGAATTGAAAATGAATCTGCTGCAGCATTCTATTGCTGTAGTTGGCTAGTCGCAGATGAAGTCCTCGCATGGCAAATCATTTCCATCTTGGAGAAGCATGATCTCAGTTCAACATGAAGGGGCCTATTATGCATGGTTTCCTTACATAATTAACATGGAAGCTGTAATTCTACATGAGGTTAGCTCAATTGATGACTTGTTTGACAAAGGAAATGATTTGCTTATCACGAGTACTCGGGGTTGATGTTCATGTTCATAGTCGTATACCAAATCTGGAGGTTTAAGTTACGAATCATTGGTTCTGAAAGATTTGAATATGGTTGAAACTGGCATCGATGTTAATAGGTTTTTTTTTTTTTGTTTATTTGCTCTATAGTCCCATTGCCTATGAAGAGTTCATAGTTTGTATTTCCGTTATATTTCTAGCTAGGTGTACAGACAA

Coding sequence (CDS)

AAAAAAACCTTCGACGTAAATAAATTTGATAACTATTTACTTTTTAAACCCAATCTCACATTCGACGCCCCGTTGGCGCCGCCGCTGCACGCAACACGTCGCTCGCCGCTCGCAGAGCACTCGCCTGGTAGCTACCCTCCCTCTCCATCTTCAATCTTCACTCGGCTCTTCTTCCCTTACAGTCGCTGTCGCCTCTCCCAGCTCAGTGCCGCAGTCGCCGTTTTTCTCCACTCGACTACTGCAATGACCATCGATTGTCTCGTTCTTGGCGCTGGGCAAGAAGTTGGGAAGAGTTGTGTGGTCGTCACAATCAATGGAAAGCGAATTATGTTTGATTGCGGCATGCATATGGGTTATCTAGACCATCGTCGATATCCTGATTTCTCTCGCATCTCTGCATCTCGCGATTACAATACTGTTCTCTCCTGTGTCATCATTACACACTTTCACCTGGACCATATAGGTGCTCTTCCATACTTCACCGAAGTTTGTGGCTATAATGGACCCATTTACATGACGTATCCAACATTGGCTTTGGCTCCTTTAATGTTGGAGGACTACCGGAAAGTGATGGTTGACCGAAGGGGTGAAGCAGAGCAATTTAGTAATGATCATATTATGGAGTGCATGAAAAAAGTTATACCTGTGGATTTGAAGCAGACTATACAGGTTGATGAAGATCTTCAAATTCGTGCTTACTATGCTGGACATGTTTTAGGAGCTGCCATGTTTTATGCTAAAGTTGGAGATGCTGCTATGGTATACACAGGAGACTATAATATGACACCTGATAGACACCTTGGAGCAGCTCAAATCGATCGAATGCAATTAGACCTTCTAATAACGGAGTCTACATATGCAACAACAATCCGTGATTCCAAATACGGCCGTGAGAGAGAATTTCTTAAAGCTGTTCATAATTGTGTGGCTAGTGGAGGGAAGGTCCTTATTCCTACTTTTGCACTTGGACGGGCTCAGGAACTCTGTATCTTGTTGGATGACTATTGGGAGCGCATGAATCTAAAGATTCCAATATACTTTTCAGCAGGTTTGACTGTTCAAGCTAATATGTACTATAAAATGCTCATCAGTTGGACCAGCCAGAAGGTTAAGGAGACATACACGACAAGGAATGCTTTTGACTTTAAGAATGTTCAAAAGTTCGACCGTTCTATGATTGATGCTCCTGGGCCTTGTGTTCTCTTTGCTACACCAGGGATGATTAGTGGTGGGTTTTCTCTTGAGGTTTTTAAGCGCTGGGCACCTTCTAAATTGAATCTTATCACATTACCCGGGTATTGCGTGGCCGGAACTATTGGACACAAGTTAATGTCCGGAAAACCCACCAAAATTGATCTGGACAAGGACACCCAAATTGATATTCACCAACTGGCATTCAGCCCACATACTGATTCCAAAGGAATCATGGATCTTGTGAAGTTCCTTAGTCCCAAGCACGTGATACTTGTACATGGAGAGAAGCCTAAAATGGTTACTTTAAAGGAGAGGATTCATTCAGAACTGGGAATCCCATGTCATGATCCTGCAAATAACGAGACTGTATCCATTTCTTCAACTCTTTCTATCAAAGCAGAATCCTCAAGCACGTTTATTCAGAGTTGTTCAACTCCCAATTTCAAATTTTTGAAAAGAAACTTGAATGATAAGATTAATTCAAAAGAGTTAAGTTCGAAAGAAGGAGGAACTTCAAGCATGTTTATACGCAGACGCTCGAATCCCCATGTCAAGCATTTGAATAGAAATCTTGACGAAAAGTTTGATTCTAGTTTAAGTTGTGGTCCAGAGATAGAGGTAAGTGATGATAGAGTGAATGAAGGGATCTTGGTGATGGAAAAAGGTAAAAAAACAAAGGTGGTACACCAGGATGAACTATTACTTCTCTTGGGAGAACAAGAGCATGAGGTTAGGTTTGCTAACTGTAGTCCTATATATTTTGGAAGCTTAGATGATACCCATGTCATAGTTTGCATATCTAGAAAATCTTTATGGCTTTCCCAGCTATCTTCAAAGCTTTCAAGTGAACTTTCAGACAGGAATGTTCAAAATTTTGGGGAGTATCTTCAAGTTGAATCATTTACACTGTCCATTTGCTCAAAGGAAAGTTGCCCTTACCGAACTACAAACAGAATTGAAAATGAATCTGCTGCAGCATTCTATTGCTGTAGTTGGCTAGTCGCAGATGAAGTCCTCGCATGGCAAATCATTTCCATCTTGGAGAAGCATGATCTCAGTTCAACATGA

Protein sequence

KKTFDVNKFDNYLLFKPNLTFDAPLAPPLHATRRSPLAEHSPGSYPPSPSSIFTRLFFPYSRCRLSQLSAAVAVFLHSTTAMTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVLSCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQFSNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMVTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSTFIQSCSTPNFKFLKRNLNDKINSKELSSKEGGTSSMFIRRRSNPHVKHLNRNLDEKFDSSLSCGPEIEVSDDRVNEGILVMEKGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHVIVCISRKSLWLSQLSSKLSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLVADEVLAWQIISILEKHDLSST

Homology

[Close]

BLAST of Cp4.1LG16g01800 vs. ExPASy Swiss-Prot
Match: Q8GUU3 (Cleavage and polyadenylation specificity factor subunit 3-II OS=Arabidopsis thaliana OX=3702 GN=CPSF73-II PE=1 SV=2)

HSP 1 Score: 840.1 bits (2169), Expect = 1.9e-242
Identity = 417/670 (62.24%), Postives = 496/670 (74.03%), Query Frame = 0


Query: 82  MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL 141
           M IDCLVLGAGQE+GKSCVVVTINGK+IMFDCGMHMG  DH RYP+FS IS S D++  +
Sbjct: 1   MAIDCLVLGAGQEIGKSCVVVTINGKKIMFDCGMHMGCDDHNRYPNFSLISKSGDFDNAI 60

Query: 142 SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF 201
           SC+IITHFH+DH+GALPYFTEVCGYNGPIYM+YPT AL+PLMLEDYR+VMVDRRGE E F
Sbjct: 61  SCIIITHFHMDHVGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEELF 120

Query: 202 SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 261
           +  HI  CMKKVI +DLKQTIQVDEDLQIRAYYAGHVLGA M YAK+GDAA+VYTGDYNM
Sbjct: 121 TTTHIANCMKKVIAIDLKQTIQVDEDLQIRAYYAGHVLGAVMVYAKMGDAAIVYTGDYNM 180

Query: 262 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA 321
           T DRHLGAA+IDR+QLDLLI+ESTYATTIR SKY REREFL+AVH CVA GGK LIP+FA
Sbjct: 181 TTDRHLGAAKIDRLQLDLLISESTYATTIRGSKYPREREFLQAVHKCVAGGGKALIPSFA 240

Query: 322 LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD 381
           LGRAQELC+LLDDYWERMN+K+PIYFS+GLT+QANMYYKMLISWTSQ VKE + T N FD
Sbjct: 241 LGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQNVKEKHNTHNPFD 300

Query: 382 FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH 441
           FKNV+ FDRS+I APGPCVLFATPGM+  GFSLEVFK WAPS LNL+ LPGY VAGT+GH
Sbjct: 301 FKNVKDFDRSLIHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGH 360

Query: 442 KLMSGKPTKIDLDKDTQID----IHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM 501
           KLM+GKPT +DL   T++D    +HQ+AFSPHTD+KGIMDL KFLSPK+V+LVHGEKP M
Sbjct: 361 KLMAGKPTTVDLYNGTKVDVRCKVHQVAFSPHTDAKGIMDLTKFLSPKNVVLVHGEKPSM 420

Query: 502 VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSTFIQSCSTPNFKFLKRNLNDKI 561
           + LKE+I SEL IPC  PAN ETVS +ST  IKA +S  F++SCS PNFKF         
Sbjct: 421 MILKEKITSELDIPCFVPANGETVSFASTTYIKANASDMFLKSCSNPNFKF--------- 480

Query: 562 NSKELSSKEGGTSSMFIRRRSNPHVKHLNRNLDEKFDSSLSCGPEIEVSDDRVNEGILVM 621
                                                   S   ++ V+D R  +G+LV+
Sbjct: 481 ----------------------------------------SNSTQLRVTDHRTADGVLVI 540

Query: 622 EKGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYF-GSLDDTHVIVCISRKSLWLSQLSS 681
           EK KK K+VHQDE+  +L E+ H V  A+C P+   G  +D  V +        + QLS+
Sbjct: 541 EKSKKAKIVHQDEISEVLHEKNHVVSLAHCCPVKVKGESEDDDVDL--------IKQLSA 600

Query: 682 KLSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLVADEV 741
           K+   +S   +      LQV SF  S+C K+ C +R+++   + S A F CC+W +AD  
Sbjct: 601 KILKTVSGAQIHESENCLQVASFKGSLCLKDKCMHRSSS---SSSEAVFLCCNWSIADLE 610

Query: 742 LAWQIISILE 747
           L W+II+ ++
Sbjct: 661 LGWEIINAIK 610

[Close]

BLAST of Cp4.1LG16g01800 vs. ExPASy Swiss-Prot
Match: Q54YL3 (Integrator complex subunit 11 homolog OS=Dictyostelium discoideum OX=44689 GN=ints11 PE=3 SV=1)

HSP 1 Score: 608.6 bits (1568), Expect = 9.5e-173
Identity = 300/531 (56.50%), Postives = 387/531 (72.88%), Query Frame = 0


Query: 82  MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL 141
           MTI  + LGAGQ+VG+SCV+VTI  K IMFDCGMHMG  D RR+PDFS IS +  +  V+
Sbjct: 1   MTIKVVPLGAGQDVGRSCVIVTIGNKNIMFDCGMHMGMNDARRFPDFSYISKNGQFTKVI 60

Query: 142 SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF 201
            CVIITHFHLDH GALP+FTE+CGY+GPIYMT PT A+ P++LEDYRK+ V+++GE   F
Sbjct: 61  DCVIITHFHLDHCGALPFFTEMCGYDGPIYMTLPTKAICPILLEDYRKITVEKKGETNFF 120

Query: 202 SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 261
           +   I +CMKKVIPV+L QTI+VDE+L I+AYYAGHVLGAAMFYAKVGD ++VYTGDYNM
Sbjct: 121 TAQMIKDCMKKVIPVNLHQTIKVDEELSIKAYYAGHVLGAAMFYAKVGDESVVYTGDYNM 180

Query: 262 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA 321
           TPDRHLG+A ID+++ D+LITE+TYATTIRDSK GRER+FLK +H CV  GGKVLIP FA
Sbjct: 181 TPDRHLGSAWIDQVKPDVLITETTYATTIRDSKRGRERDFLKRIHECVEKGGKVLIPVFA 240

Query: 322 LGRAQELCILLDDYWERMNL-KIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAF 381
           LGR QELCIL+D YWE+MNL  IPIYFSAGL  +AN+YYK+ I+WT+QK+K+T+  RN F
Sbjct: 241 LGRVQELCILIDSYWEQMNLGHIPIYFSAGLAEKANLYYKLFINWTNQKIKQTFVKRNMF 300

Query: 382 DFKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIG 441
           DFK+++ F   ++DAPG  VLFATPGM+  G SLEVFK+WAP++LN+  +PGYCV GT+G
Sbjct: 301 DFKHIKPFQSHLVDAPGAMVLFATPGMLHAGASLEVFKKWAPNELNMTIIPGYCVVGTVG 360

Query: 442 HKLMS--------GKPTK--IDLDKDTQID----IHQLAFSPHTDSKGIMDLVKFLSPKH 501
           +KL++         KP    +++DK T I+    IH L+FS H D+KGI+ L+K  +P++
Sbjct: 361 NKLLTTGSDQQQQSKPQSQMVEIDKKTTIEVKCKIHNLSFSAHADAKGILQLIKMSNPRN 420

Query: 502 VILVHGEKPKMVTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSTFIQS------ 561
           VILVHGEK KM  L ++I  E+G+ C+ PAN  T+ I +  SI  + S   ++       
Sbjct: 421 VILVHGEKEKMGFLSQKIIKEMGVNCYYPANGVTIIIDTMKSIPIDISLNLLKRQILDYS 480

Query: 562 --------CSTPNFKFL----KRNLNDKINSKELSSKEGGTSSMFIRRRSN 580
                    +  NF  L      N N+  NS +L   +  TS++FI   +N
Sbjct: 481 YQYNNNNLNNFNNFNNLNNLNNNNNNNNNNSLKLIDIKNNTSTLFINNNNN 531

[Close]

BLAST of Cp4.1LG16g01800 vs. ExPASy Swiss-Prot
Match: Q5ZIH0 (Integrator complex subunit 11 OS=Gallus gallus OX=9031 GN=INTS11 PE=2 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 5.2e-163
Identity = 265/450 (58.89%), Postives = 351/450 (78.00%), Query Frame = 0


Query: 89  LGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVLSCVIITH 148
           LGAGQ+VG+SC++V+I GK +M DCGMHMGY D RR+PDFS I+ +      L CVII+H
Sbjct: 9   LGAGQDVGRSCILVSIAGKNVMLDCGMHMGYNDDRRFPDFSYITQNGRLTDFLDCVIISH 68

Query: 149 FHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQFSNDHIME 208
           FHLDH GALPYF+E+ GY+GPIYMT+PT A+ P++LEDYRK+ VD++GE   F++  I +
Sbjct: 69  FHLDHCGALPYFSEMVGYDGPIYMTHPTKAICPILLEDYRKITVDKKGETNFFTSQMIKD 128

Query: 209 CMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLG 268
           CMKKV+ V L QT+QVDE+L+I+AYYAGHVLGAAMF  KVG  ++VYTGDYNMTPDRHLG
Sbjct: 129 CMKKVVAVHLHQTVQVDEELEIKAYYAGHVLGAAMFQIKVGCESVVYTGDYNMTPDRHLG 188

Query: 269 AAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQEL 328
           AA ID+ + DLLITESTYATTIRDSK  RER+FLK VH  V  GGKVLIP FALGRAQEL
Sbjct: 189 AAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFALGRAQEL 248

Query: 329 CILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFDFKNVQKF 388
           CILL+ +WERMNLK PIYFS GLT +AN YYK+ I+WT+QK+++T+  RN F+FK+++ F
Sbjct: 249 CILLETFWERMNLKAPIYFSTGLTEKANHYYKLFITWTNQKIRKTFVQRNMFEFKHIKAF 308

Query: 389 DRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKP 448
           DR+  D PGP V+FATPGM+  G SL++F++WA ++ N++ +PGYCV GT+GHK++SG+ 
Sbjct: 309 DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQ- 368

Query: 449 TKIDLD----KDTQIDIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMVTLKERI 508
            K++++     + ++ +  ++FS H D+KGIM L++   P++V+LVHGE  KM  LK++I
Sbjct: 369 RKLEMEGRQILEVKMQVEYMSFSAHADAKGIMQLIRQAEPRNVLLVHGEAKKMEFLKQKI 428

Query: 509 HSELGIPCHDPANNETVSISSTLSIKAESS 535
             E  + C+ PAN ET +I +  SI  + S
Sbjct: 429 EQEFHVNCYMPANGETTTIFTNPSIPVDIS 457

[Close]

BLAST of Cp4.1LG16g01800 vs. ExPASy Swiss-Prot
Match: Q9CWS4 (Integrator complex subunit 11 OS=Mus musculus OX=10090 GN=Ints11 PE=1 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 8.9e-163
Identity = 275/511 (53.82%), Postives = 374/511 (73.19%), Query Frame = 0


Query: 89  LGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVLSCVIITH 148
           LGAGQ+VG+SC++V+I+GK +M DCGMHMGY D RR+PDFS I+ S      L CVII+H
Sbjct: 9   LGAGQDVGRSCILVSISGKNVMLDCGMHMGYNDDRRFPDFSYITQSGRLTDFLDCVIISH 68

Query: 149 FHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQFSNDHIME 208
           FHLDH GALPYF+E+ GY+GPIYMT+PT A+ P++LEDYRK+ VD++GEA  F++  I +
Sbjct: 69  FHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKD 128

Query: 209 CMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLG 268
           CMKKV+ V L QT+QVD++L+I+AYYAGHVLGAAMF  KVG  ++VYTGDYNMTPDRHLG
Sbjct: 129 CMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDRHLG 188

Query: 269 AAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQEL 328
           AA ID+ + +LLITESTYATTIRDSK  RER+FLK VH  V  GGKVLIP FALGRAQEL
Sbjct: 189 AAWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFALGRAQEL 248

Query: 329 CILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFDFKNVQKF 388
           CILL+ +WERMNLK+PIYFS GLT +AN YYK+ I+WT+QK+++T+  RN F+FK+++ F
Sbjct: 249 CILLETFWERMNLKVPIYFSTGLTEKANHYYKLFITWTNQKIRKTFVQRNMFEFKHIKAF 308

Query: 389 DRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKP 448
           DR+  D PGP V+FATPGM+  G SL++F++WA ++ N++ +PGYCV GT+GHK++SG+ 
Sbjct: 309 DRTFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQ- 368

Query: 449 TKIDLD----KDTQIDIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMVTLKERI 508
            K++++     + ++ +  ++FS H D+KGIM LV    P+ V+LVHGE  KM  L+++I
Sbjct: 369 RKLEMEGRQMLEVKMQVEYMSFSAHADAKGIMQLVGQAEPESVLLVHGEAKKMEFLRQKI 428

Query: 509 HSELGIPCHDPANNETVSISSTLSI---------KAESSSTFIQSCSTPNF---KFLKRN 568
             E  + C+ PAN ETV++ ++ SI         K E     +     P       + ++
Sbjct: 429 EQEFRVSCYMPANGETVTLPTSPSIPVGISLGLLKREMVQGLLPEAKKPRLLHGTLIMKD 488

Query: 569 LNDKINSKELSSKEGGTSSMFIRRRSNPHVK 584
            N ++ S E + KE G +   +R     H++
Sbjct: 489 SNFRLVSSEQALKELGLAEHQLRFTCRVHLQ 518

[Close]

BLAST of Cp4.1LG16g01800 vs. ExPASy Swiss-Prot
Match: Q3MHC2 (Integrator complex subunit 11 OS=Rattus norvegicus OX=10116 GN=Ints11 PE=2 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 1.2e-162
Identity = 275/511 (53.82%), Postives = 374/511 (73.19%), Query Frame = 0


Query: 89  LGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVLSCVIITH 148
           LGAGQ+VG+SC++V+I+GK +M DCGMHMGY D RR+PDFS I+ S      L CVII+H
Sbjct: 9   LGAGQDVGRSCILVSISGKNVMLDCGMHMGYNDDRRFPDFSYITQSGRLTDFLDCVIISH 68

Query: 149 FHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQFSNDHIME 208
           FHLDH GALPYF+E+ GY+GPIYMT+PT A+ P++LEDYRK+ VD++GEA  F++  I +
Sbjct: 69  FHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKD 128

Query: 209 CMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLG 268
           CMKKV+ V L QT+QVD++L+I+AYYAGHVLGAAMF  KVG  ++VYTGDYNMTPDRHLG
Sbjct: 129 CMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDRHLG 188

Query: 269 AAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQEL 328
           AA ID+ + +LLITESTYATTIRDSK  RER+FLK VH  V  GGKVLIP FALGRAQEL
Sbjct: 189 AAWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFALGRAQEL 248

Query: 329 CILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFDFKNVQKF 388
           CILL+ +WERMNLK+PIYFS GLT +AN YYK+ I+WT+QK+++T+  RN F+FK+++ F
Sbjct: 249 CILLETFWERMNLKVPIYFSTGLTEKANHYYKLFITWTNQKIRKTFVQRNMFEFKHIKAF 308

Query: 389 DRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKP 448
           DR+  D PGP V+FATPGM+  G SL++F++WA ++ N++ +PGYCV GT+GHK++SG+ 
Sbjct: 309 DRTFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQ- 368

Query: 449 TKIDLD----KDTQIDIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMVTLKERI 508
            K++++     + ++ +  ++FS H D+KGIM LV    P+ V+LVHGE  KM  L+++I
Sbjct: 369 RKLEMEGRQMLEVKMQVEYMSFSAHADAKGIMQLVGQAEPESVLLVHGEAKKMEFLRQKI 428

Query: 509 HSELGIPCHDPANNETVSISSTLSI---------KAESSSTFIQSCSTPNF---KFLKRN 568
             E  + C+ PAN ETV++ ++ SI         K E     +     P       + ++
Sbjct: 429 EQEFRVSCYMPANGETVTLPTSPSIPVGISLGLLKREMVQGLLPEAKKPRLLHGTLIMKD 488

Query: 569 LNDKINSKELSSKEGGTSSMFIRRRSNPHVK 584
            N ++ S E + KE G +   +R     H++
Sbjct: 489 NNFRLVSSEQALKELGLAEHQLRFTCRVHLQ 518

[Close]

BLAST of Cp4.1LG16g01800 vs. NCBI nr
Match: XP_023513382.1 (cleavage and polyadenylation specificity factor subunit 3-II [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1357 bits (3513), Expect = 0.0
Identity = 672/676 (99.41%), Postives = 672/676 (99.41%), Query Frame = 0


Query: 82  MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL 141
           MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL
Sbjct: 1   MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL 60

Query: 142 SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF 201
           SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF
Sbjct: 61  SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF 120

Query: 202 SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 261
           SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM
Sbjct: 121 SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 180

Query: 262 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA 321
           TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA
Sbjct: 181 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA 240

Query: 322 LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD 381
           LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD
Sbjct: 241 LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD 300

Query: 382 FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH 441
           FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH
Sbjct: 301 FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH 360

Query: 442 KLMSGKPTKIDLDKDTQID----IHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM 501
           KLMSGKPTKIDLDKDTQID    IHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM
Sbjct: 361 KLMSGKPTKIDLDKDTQIDVQCQIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM 420

Query: 502 VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSTFIQSCSTPNFKFLKRNLNDKI 561
           VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSTFIQSCSTPNFKFLKRNLNDKI
Sbjct: 421 VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSTFIQSCSTPNFKFLKRNLNDKI 480

Query: 562 NSKELSSKEGGTSSMFIRRRSNPHVKHLNRNLDEKFDSSLSCGPEIEVSDDRVNEGILVM 621
           NSKELSSKEGGTSSMFIRRRSNPHVKHLNRNLDEKFDSSLSCGPEIEVSDDRVNEGILVM
Sbjct: 481 NSKELSSKEGGTSSMFIRRRSNPHVKHLNRNLDEKFDSSLSCGPEIEVSDDRVNEGILVM 540

Query: 622 EKGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHVIVCISRKSLWLSQLSSK 681
           EKGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHVIVCISRKSLWLSQLSSK
Sbjct: 541 EKGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHVIVCISRKSLWLSQLSSK 600

Query: 682 LSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLVADEVL 741
           LSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLVADEVL
Sbjct: 601 LSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLVADEVL 660

Query: 742 AWQIISILEKHDLSST 753
           AWQIISILEKHDLSST
Sbjct: 661 AWQIISILEKHDLSST 676

[Close]

BLAST of Cp4.1LG16g01800 vs. NCBI nr
Match: XP_022986472.1 (cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Cucurbita maxima])

HSP 1 Score: 1347 bits (3486), Expect = 0.0
Identity = 665/676 (98.37%), Postives = 669/676 (98.96%), Query Frame = 0


Query: 82  MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL 141
           MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL
Sbjct: 1   MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL 60

Query: 142 SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF 201
           SCVIITHFHLDHIGALPYFTEVCGYNGPIYMT+PT+ALAPLMLEDYRKVMVDRRGEAEQF
Sbjct: 61  SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTFPTMALAPLMLEDYRKVMVDRRGEAEQF 120

Query: 202 SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 261
           SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM
Sbjct: 121 SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 180

Query: 262 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA 321
           TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA
Sbjct: 181 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA 240

Query: 322 LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD 381
           LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD
Sbjct: 241 LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD 300

Query: 382 FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH 441
           FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH
Sbjct: 301 FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH 360

Query: 442 KLMSGKPTKIDLDKDTQID----IHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM 501
           KLMSGKPTKIDLDKDTQID    IHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM
Sbjct: 361 KLMSGKPTKIDLDKDTQIDVQCQIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM 420

Query: 502 VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSTFIQSCSTPNFKFLKRNLNDKI 561
           VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSTFIQSCSTPNFKFLKRNLNDKI
Sbjct: 421 VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSTFIQSCSTPNFKFLKRNLNDKI 480

Query: 562 NSKELSSKEGGTSSMFIRRRSNPHVKHLNRNLDEKFDSSLSCGPEIEVSDDRVNEGILVM 621
           NSKELSSKEGGTSSMF RRRSNPHVKHLNRNLDEKFDSSLSCGPE+EVSDDRVNEGILVM
Sbjct: 481 NSKELSSKEGGTSSMFTRRRSNPHVKHLNRNLDEKFDSSLSCGPELEVSDDRVNEGILVM 540

Query: 622 EKGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHVIVCISRKSLWLSQLSSK 681
           EKGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHV+ CISRKSLWLSQLSSK
Sbjct: 541 EKGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHVMDCISRKSLWLSQLSSK 600

Query: 682 LSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLVADEVL 741
           LSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLV DEVL
Sbjct: 601 LSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLVTDEVL 660

Query: 742 AWQIISILEKHDLSST 753
           AWQIISILEKHDLSST
Sbjct: 661 AWQIISILEKHDLSST 676

[Close]

BLAST of Cp4.1LG16g01800 vs. NCBI nr
Match: XP_022944195.1 (cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Cucurbita moschata])

HSP 1 Score: 1347 bits (3486), Expect = 0.0
Identity = 666/676 (98.52%), Postives = 668/676 (98.82%), Query Frame = 0


Query: 82  MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL 141
           MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL
Sbjct: 1   MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL 60

Query: 142 SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF 201
           SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF
Sbjct: 61  SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF 120

Query: 202 SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 261
           SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM
Sbjct: 121 SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 180

Query: 262 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA 321
           TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA
Sbjct: 181 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA 240

Query: 322 LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD 381
           LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD
Sbjct: 241 LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD 300

Query: 382 FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH 441
           FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH
Sbjct: 301 FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH 360

Query: 442 KLMSGKPTKIDLDKDTQID----IHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM 501
           KLMSGKPTKIDLDKDTQID    IHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM
Sbjct: 361 KLMSGKPTKIDLDKDTQIDVQCQIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM 420

Query: 502 VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSTFIQSCSTPNFKFLKRNLNDKI 561
           VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSS FIQSCSTPNFKFLKRNLNDKI
Sbjct: 421 VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSMFIQSCSTPNFKFLKRNLNDKI 480

Query: 562 NSKELSSKEGGTSSMFIRRRSNPHVKHLNRNLDEKFDSSLSCGPEIEVSDDRVNEGILVM 621
           NSKELSSKEGGTSSMF RRRSNPHVKHLNRNLDEKFDSSLSCGPE+EVSDDRVNEGILVM
Sbjct: 481 NSKELSSKEGGTSSMFFRRRSNPHVKHLNRNLDEKFDSSLSCGPELEVSDDRVNEGILVM 540

Query: 622 EKGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHVIVCISRKSLWLSQLSSK 681
           E GKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHV+ CISRKSLWLSQLSSK
Sbjct: 541 ENGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHVMDCISRKSLWLSQLSSK 600

Query: 682 LSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLVADEVL 741
           LSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLVADEVL
Sbjct: 601 LSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLVADEVL 660

Query: 742 AWQIISILEKHDLSST 753
           AWQIISILEKHDLSST
Sbjct: 661 AWQIISILEKHDLSST 676

[Close]

BLAST of Cp4.1LG16g01800 vs. NCBI nr
Match: KAG7011001.1 (Cleavage and polyadenylation specificity factor subunit 3-II [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1300 bits (3363), Expect = 0.0
Identity = 649/683 (95.02%), Postives = 651/683 (95.31%), Query Frame = 0


Query: 82  MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL 141
           MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL
Sbjct: 1   MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL 60

Query: 142 SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF 201
           SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF
Sbjct: 61  SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF 120

Query: 202 SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 261
           SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM
Sbjct: 121 SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 180

Query: 262 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA 321
           TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA
Sbjct: 181 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA 240

Query: 322 LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD 381
           LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQK K          
Sbjct: 241 LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKFKS--------- 300

Query: 382 FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH 441
                 FDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH
Sbjct: 301 ------FDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH 360

Query: 442 KLMSGKPTKIDLDKDTQID-----------IHQLAFSPHTDSKGIMDLVKFLSPKHVILV 501
           KLMSGKPTKIDLDKDTQID           IHQLAFSPHTDSKGIMDLVKFLSPKHVILV
Sbjct: 361 KLMSGKPTKIDLDKDTQIDVQCQASIYQLYIHQLAFSPHTDSKGIMDLVKFLSPKHVILV 420

Query: 502 HGEKPKMVTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSTFIQSCSTPNFKFLK 561
           HGEKPKMVTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSS FIQSCSTPNFKFLK
Sbjct: 421 HGEKPKMVTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSMFIQSCSTPNFKFLK 480

Query: 562 RNLNDKINSKELSSKEGGTSSMFIRRRSNPHVKHLNRNLDEKFDSSLSCGPEIEVSDDRV 621
           RNLNDKINSKELSSKEGGTSSMF RRRSNPHVKHLNRNLDEKFDSSLSCGPE+EVSDDRV
Sbjct: 481 RNLNDKINSKELSSKEGGTSSMFFRRRSNPHVKHLNRNLDEKFDSSLSCGPELEVSDDRV 540

Query: 622 NEGILVMEKGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHVIVCISRKSLW 681
           NEGILVME GKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHV+ CISRKSLW
Sbjct: 541 NEGILVMENGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHVMDCISRKSLW 600

Query: 682 LSQLSSKLSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSW 741
           LSQLSSKLSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSW
Sbjct: 601 LSQLSSKLSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSW 660

Query: 742 LVADEVLAWQIISILEKHDLSST 753
           LVADEVLAWQIISILEKHDLSST
Sbjct: 661 LVADEVLAWQIISILEKHDLSST 668

[Close]

BLAST of Cp4.1LG16g01800 vs. NCBI nr
Match: XP_038901162.1 (cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Benincasa hispida] >XP_038901163.1 cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Benincasa hispida] >XP_038901164.1 cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Benincasa hispida] >XP_038901165.1 cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Benincasa hispida] >XP_038901166.1 cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Benincasa hispida] >XP_038901167.1 cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Benincasa hispida] >XP_038901168.1 cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Benincasa hispida])

HSP 1 Score: 1249 bits (3233), Expect = 0.0
Identity = 606/678 (89.38%), Postives = 643/678 (94.84%), Query Frame = 0


Query: 82  MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL 141
           M IDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMH+GY+DH +YPDFSRI AS DYNT L
Sbjct: 1   MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYVDHHQYPDFSRIPASCDYNTAL 60

Query: 142 SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF 201
           SC+IITHFHLDHIGALPYFTEVCGYNGPIYMTYPT+ALAPLMLEDYRKV+VDRRGEAEQF
Sbjct: 61  SCIIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTMALAPLMLEDYRKVLVDRRGEAEQF 120

Query: 202 SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 261
           +NDHIMECMKKV+PVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM
Sbjct: 121 TNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 180

Query: 262 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA 321
           TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA
Sbjct: 181 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA 240

Query: 322 LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD 381
           LGRAQELC+LLDDYWERMNLK+PIY SAGLTVQANMYYKMLISWTSQKVKETY+TRNAFD
Sbjct: 241 LGRAQELCVLLDDYWERMNLKVPIYVSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD 300

Query: 382 FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH 441
           FKNVQKFDRSMIDAPGPC+LFATPGMISGGFSLEVFKRWAPSK NLITLPGYCVAGT+GH
Sbjct: 301 FKNVQKFDRSMIDAPGPCILFATPGMISGGFSLEVFKRWAPSKSNLITLPGYCVAGTVGH 360

Query: 442 KLMSGKPTKIDLDKDTQID----IHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM 501
           KLMSGKPTKIDLDKDTQID    IHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM
Sbjct: 361 KLMSGKPTKIDLDKDTQIDVQCQIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM 420

Query: 502 VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSTFIQSCSTPNFKFLKRNLNDKI 561
            TLK+RIHSELGIPC+DPANNETVSISSTLS+KAE+S  FIQSCSTPNFKFLKRNLN+K+
Sbjct: 421 ATLKQRIHSELGIPCYDPANNETVSISSTLSVKAEASRMFIQSCSTPNFKFLKRNLNNKV 480

Query: 562 --NSKELSSKEGGTSSMFIRRRSNPHVKHLNRNLDEKFDSSLSCGPEIEVSDDRVNEGIL 621
             N K+LS K GGTS +FIR+ SN H K+LNRNLD KFDSS SCGPE++VSDDRVNEGIL
Sbjct: 481 DPNLKDLSCKAGGTSRVFIRKCSNHHFKYLNRNLDTKFDSSFSCGPELQVSDDRVNEGIL 540

Query: 622 VMEKGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHVIVCISRKSLWLSQLS 681
           VMEKGKKTKV+HQDE+LLLLGEQEHEVRFANC PIYFG+L++THV+ C+SRKSLWLSQL 
Sbjct: 541 VMEKGKKTKVLHQDEVLLLLGEQEHEVRFANCRPIYFGNLEETHVMDCLSRKSLWLSQLF 600

Query: 682 SKLSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLVADE 741
           SKLSSELSD+NVQN GEYLQVESFTLSICSKE CPYRTTNRIENES   F CCSWL+ADE
Sbjct: 601 SKLSSELSDKNVQNLGEYLQVESFTLSICSKEDCPYRTTNRIENESTIVFCCCSWLIADE 660

Query: 742 VLAWQIISILEKHDLSST 753
           +LAW+IISILEKH+L ST
Sbjct: 661 ILAWKIISILEKHNLGST 678

[Close]

BLAST of Cp4.1LG16g01800 vs. ExPASy TrEMBL
Match: A0A6J1J7M0 (cleavage and polyadenylation specificity factor subunit 3-II isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484204 PE=3 SV=1)

HSP 1 Score: 1347 bits (3486), Expect = 0.0
Identity = 665/676 (98.37%), Postives = 669/676 (98.96%), Query Frame = 0


Query: 82  MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL 141
           MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL
Sbjct: 1   MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL 60

Query: 142 SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF 201
           SCVIITHFHLDHIGALPYFTEVCGYNGPIYMT+PT+ALAPLMLEDYRKVMVDRRGEAEQF
Sbjct: 61  SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTFPTMALAPLMLEDYRKVMVDRRGEAEQF 120

Query: 202 SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 261
           SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM
Sbjct: 121 SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 180

Query: 262 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA 321
           TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA
Sbjct: 181 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA 240

Query: 322 LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD 381
           LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD
Sbjct: 241 LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD 300

Query: 382 FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH 441
           FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH
Sbjct: 301 FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH 360

Query: 442 KLMSGKPTKIDLDKDTQID----IHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM 501
           KLMSGKPTKIDLDKDTQID    IHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM
Sbjct: 361 KLMSGKPTKIDLDKDTQIDVQCQIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM 420

Query: 502 VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSTFIQSCSTPNFKFLKRNLNDKI 561
           VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSTFIQSCSTPNFKFLKRNLNDKI
Sbjct: 421 VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSTFIQSCSTPNFKFLKRNLNDKI 480

Query: 562 NSKELSSKEGGTSSMFIRRRSNPHVKHLNRNLDEKFDSSLSCGPEIEVSDDRVNEGILVM 621
           NSKELSSKEGGTSSMF RRRSNPHVKHLNRNLDEKFDSSLSCGPE+EVSDDRVNEGILVM
Sbjct: 481 NSKELSSKEGGTSSMFTRRRSNPHVKHLNRNLDEKFDSSLSCGPELEVSDDRVNEGILVM 540

Query: 622 EKGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHVIVCISRKSLWLSQLSSK 681
           EKGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHV+ CISRKSLWLSQLSSK
Sbjct: 541 EKGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHVMDCISRKSLWLSQLSSK 600

Query: 682 LSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLVADEVL 741
           LSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLV DEVL
Sbjct: 601 LSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLVTDEVL 660

Query: 742 AWQIISILEKHDLSST 753
           AWQIISILEKHDLSST
Sbjct: 661 AWQIISILEKHDLSST 676

[Close]

BLAST of Cp4.1LG16g01800 vs. ExPASy TrEMBL
Match: A0A6J1FYI7 (cleavage and polyadenylation specificity factor subunit 3-II isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448716 PE=3 SV=1)

HSP 1 Score: 1347 bits (3486), Expect = 0.0
Identity = 666/676 (98.52%), Postives = 668/676 (98.82%), Query Frame = 0


Query: 82  MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL 141
           MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL
Sbjct: 1   MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL 60

Query: 142 SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF 201
           SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF
Sbjct: 61  SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF 120

Query: 202 SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 261
           SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM
Sbjct: 121 SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 180

Query: 262 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA 321
           TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA
Sbjct: 181 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA 240

Query: 322 LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD 381
           LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD
Sbjct: 241 LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD 300

Query: 382 FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH 441
           FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH
Sbjct: 301 FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH 360

Query: 442 KLMSGKPTKIDLDKDTQID----IHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM 501
           KLMSGKPTKIDLDKDTQID    IHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM
Sbjct: 361 KLMSGKPTKIDLDKDTQIDVQCQIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM 420

Query: 502 VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSTFIQSCSTPNFKFLKRNLNDKI 561
           VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSS FIQSCSTPNFKFLKRNLNDKI
Sbjct: 421 VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSMFIQSCSTPNFKFLKRNLNDKI 480

Query: 562 NSKELSSKEGGTSSMFIRRRSNPHVKHLNRNLDEKFDSSLSCGPEIEVSDDRVNEGILVM 621
           NSKELSSKEGGTSSMF RRRSNPHVKHLNRNLDEKFDSSLSCGPE+EVSDDRVNEGILVM
Sbjct: 481 NSKELSSKEGGTSSMFFRRRSNPHVKHLNRNLDEKFDSSLSCGPELEVSDDRVNEGILVM 540

Query: 622 EKGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHVIVCISRKSLWLSQLSSK 681
           E GKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHV+ CISRKSLWLSQLSSK
Sbjct: 541 ENGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHVMDCISRKSLWLSQLSSK 600

Query: 682 LSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLVADEVL 741
           LSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLVADEVL
Sbjct: 601 LSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLVADEVL 660

Query: 742 AWQIISILEKHDLSST 753
           AWQIISILEKHDLSST
Sbjct: 661 AWQIISILEKHDLSST 676

[Close]

BLAST of Cp4.1LG16g01800 vs. ExPASy TrEMBL
Match: A0A1S3C9L2 (cleavage and polyadenylation specificity factor subunit 3-II OS=Cucumis melo OX=3656 GN=LOC103498350 PE=3 SV=1)

HSP 1 Score: 1241 bits (3210), Expect = 0.0
Identity = 609/679 (89.69%), Postives = 638/679 (93.96%), Query Frame = 0


Query: 82  MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL 141
           M IDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMH+GY+DHRRYPDFSRISASRDYN  L
Sbjct: 1   MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYVDHRRYPDFSRISASRDYNNTL 60

Query: 142 SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF 201
           SC+IITHFHLDHIGALPYFTE+CGYNGPIYMTYPT+ALAP+ LEDYRKVMVDRRGEAEQF
Sbjct: 61  SCIIITHFHLDHIGALPYFTEICGYNGPIYMTYPTMALAPITLEDYRKVMVDRRGEAEQF 120

Query: 202 SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 261
           +NDHIMEC+KKV+PVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM
Sbjct: 121 TNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 180

Query: 262 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA 321
           TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKY REREFLKAVHNC+ASGGKVLIPTFA
Sbjct: 181 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAREREFLKAVHNCLASGGKVLIPTFA 240

Query: 322 LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD 381
           LGRAQELC+LLDDYWERMNLK PIY SAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD
Sbjct: 241 LGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD 300

Query: 382 FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH 441
           FKNVQKFDRSMIDAPGPCVLFATPGMIS GFSLEVFKRWAPSKLNLITLPGYCVAGT+GH
Sbjct: 301 FKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVFKRWAPSKLNLITLPGYCVAGTVGH 360

Query: 442 KLMSGKPTKIDLDKDTQIDI----HQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM 501
           KLMSGKPTKIDLDKDTQID+    HQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM
Sbjct: 361 KLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM 420

Query: 502 VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSTFIQSCSTPNFKFLKRNLNDKI 561
             LKERIHSELGIPCHDPANNETVSISSTLSIKAE+SS FIQSCSTPNFKFLKRNL DKI
Sbjct: 421 AVLKERIHSELGIPCHDPANNETVSISSTLSIKAEASSMFIQSCSTPNFKFLKRNLIDKI 480

Query: 562 NS--KELSSKEGGTSSMFIRRRSNPHVKHLNRNLDEKFDSSLSCGPEIEVSDDRVNEGIL 621
           +   K+LS K   TS+M IR  SNPH KHLNRNLD KFDSSLSCGPE++VSDDRVNEGIL
Sbjct: 481 DPDLKDLSYKAVRTSNMLIRECSNPHFKHLNRNLDAKFDSSLSCGPELQVSDDRVNEGIL 540

Query: 622 VMEKGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHVIVCISRKSLWLSQLS 681
           VME GKKTK +HQDELLLLLGEQEHEVRFA+C PIYFGSLD+ HV+  +SRKSLWLSQLS
Sbjct: 541 VMENGKKTKALHQDELLLLLGEQEHEVRFAHCRPIYFGSLDEIHVMDSLSRKSLWLSQLS 600

Query: 682 SKLSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAA-AFYCCSWLVAD 741
            KLS+ELSDRNVQN GEYLQVES TLSICSKE+CPYRTTNRIENES+A  F CCSWLVAD
Sbjct: 601 FKLSTELSDRNVQNLGEYLQVESITLSICSKENCPYRTTNRIENESSAMVFCCCSWLVAD 660

Query: 742 EVLAWQIISILEKHDLSST 753
           E+LAW+IISILEKHDL ST
Sbjct: 661 EILAWKIISILEKHDLGST 679

[Close]

BLAST of Cp4.1LG16g01800 vs. ExPASy TrEMBL
Match: A0A0A0LQW3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G435430 PE=3 SV=1)

HSP 1 Score: 1221 bits (3160), Expect = 0.0
Identity = 600/677 (88.63%), Postives = 631/677 (93.21%), Query Frame = 0


Query: 82  MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL 141
           M IDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMH+GY+DHRRYPDFSRISAS DYN VL
Sbjct: 1   MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYVDHRRYPDFSRISASHDYNNVL 60

Query: 142 SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF 201
           SC+IITHFHLDHIGALPYFTEVCGYNGPIYMTYPT+ALAP+ LEDYRKVMVDRRGEAEQF
Sbjct: 61  SCIIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTMALAPITLEDYRKVMVDRRGEAEQF 120

Query: 202 SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 261
           +NDHIMEC+KKV+PVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM
Sbjct: 121 TNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 180

Query: 262 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA 321
           TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKY REREFLKAVHNC+ASGGKVLIPTFA
Sbjct: 181 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAREREFLKAVHNCLASGGKVLIPTFA 240

Query: 322 LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD 381
           LGRAQELC+LLDDYWERMNLK PIY SAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD
Sbjct: 241 LGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD 300

Query: 382 FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH 441
           FKNVQKFDRSMIDAPGPCVLFATPGMIS GFSLEVFKRWAPSKLNLITLPGYCVAGT+GH
Sbjct: 301 FKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVFKRWAPSKLNLITLPGYCVAGTVGH 360

Query: 442 KLMSGKPTKIDLDKDTQIDI----HQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM 501
           KLMSGKPTKIDLDK TQID+    HQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM
Sbjct: 361 KLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM 420

Query: 502 VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSTFIQSCSTPNFKFLKRNLNDKI 561
             LKERIHSELGIPCHDPANNETVSISSTLS+KAE+SS FIQSCSTPNFKFLKRNL D  
Sbjct: 421 AVLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLIDP- 480

Query: 562 NSKELSSKEGGTSSMFIRRRSNPHVKHLNRNLDEKFDSSLSCGPEIEVSDDRVNEGILVM 621
           + K+LS K   TS+M IR  SNPH KHL RNLD KFDSSLSCGP ++VSDDRVNEGILVM
Sbjct: 481 DLKDLSYKAERTSNMLIRECSNPHFKHLKRNLDAKFDSSLSCGPALQVSDDRVNEGILVM 540

Query: 622 EKGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYFGSLDDTHVIVCISRKSLWLSQLSSK 681
           E GKKTK +HQDELLLLLG+QEHEVRFA+C PIYFGSLD+ HV+  +SRKSLWLSQLS K
Sbjct: 541 ENGKKTKALHQDELLLLLGQQEHEVRFAHCRPIYFGSLDEIHVMDSLSRKSLWLSQLSFK 600

Query: 682 LSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAA-AFYCCSWLVADEV 741
           LS+ELSDRNVQN GEYLQVES TLSICSKE+CPYRT +RI+NES A  F CCSWLVADE+
Sbjct: 601 LSTELSDRNVQNLGEYLQVESITLSICSKENCPYRTIDRIKNESTAMVFCCCSWLVADEI 660

Query: 742 LAWQIISILEKHDLSST 753
           LAW+IISILEKHDL ST
Sbjct: 661 LAWKIISILEKHDLGST 676

[Close]

BLAST of Cp4.1LG16g01800 vs. ExPASy TrEMBL
Match: Q6E435 (ACT11D09.9 OS=Cucumis melo OX=3656 GN=ACT11D09.9 PE=3 SV=1)

HSP 1 Score: 1221 bits (3160), Expect = 0.0
Identity = 600/667 (89.96%), Postives = 628/667 (94.15%), Query Frame = 0


Query: 91  AGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVLSCVIITHFH 150
           AGQEVGKSCVVVTINGKRIMFDCGMH+GY+DHRRYPDFSRISASRDYN  LSC+IITHFH
Sbjct: 42  AGQEVGKSCVVVTINGKRIMFDCGMHLGYVDHRRYPDFSRISASRDYNNTLSCIIITHFH 101

Query: 151 LDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQFSNDHIMECM 210
           LDHIGALPYFTE+CGYNGPIYMTYPT+ALAP+ LEDYRKVMVDRRGEAEQF+NDHIMEC+
Sbjct: 102 LDHIGALPYFTEICGYNGPIYMTYPTMALAPITLEDYRKVMVDRRGEAEQFTNDHIMECL 161

Query: 211 KKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAA 270
           KKV+PVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAA
Sbjct: 162 KKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAA 221

Query: 271 QIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQ-ELC 330
           QIDRMQLDLLITESTYATTIRDSKY REREFLKAVHNC+ASGGKVLIPTFALGRAQ ELC
Sbjct: 222 QIDRMQLDLLITESTYATTIRDSKYAREREFLKAVHNCLASGGKVLIPTFALGRAQQELC 281

Query: 331 ILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFDFKNVQKFD 390
           +LLDDYWERMNLK PIY SAGLTVQANMYYKMLISWTSQKVKETYTTRNAFDFKNVQKFD
Sbjct: 282 VLLDDYWERMNLKFPIYVSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFDFKNVQKFD 341

Query: 391 RSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPT 450
           RSMIDAPGPCVLFATPGMIS GFSLEVFKRWAPSKLNLITLPGYCVAGT+GHKLMSGKPT
Sbjct: 342 RSMIDAPGPCVLFATPGMISSGFSLEVFKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPT 401

Query: 451 KIDLDKDTQIDIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMVTLKERIHSELG 510
           KIDLDKDTQID+HQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM  LKERIHSELG
Sbjct: 402 KIDLDKDTQIDVHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELG 461

Query: 511 IPCHDPANNETVSISSTLSIKAESSSTFIQSCSTPNFKFLKRNLNDKINS--KELSSKEG 570
           IPCHDPANNETVSISSTLSIKAE+SS FIQSCSTPNFKFLKRNL DKI+   K+LS K  
Sbjct: 462 IPCHDPANNETVSISSTLSIKAEASSMFIQSCSTPNFKFLKRNLIDKIDPDLKDLSYKAV 521

Query: 571 GTSSMFIRRRSNPHVKHLNRNLDEKFDSSLSCGPEIEVSDDRVNEGILVMEKGKKTKVVH 630
            TS+M IR  SNPH KHLNRNLD KFDSSLS GPE++VSDDRVNEGILVME GKKTK +H
Sbjct: 522 RTSNMLIRECSNPHFKHLNRNLDAKFDSSLSGGPELQVSDDRVNEGILVMENGKKTKALH 581

Query: 631 QDELLLLLGEQEHEVRFANCSPIYFGSLDDTHVIVCISRKSLWLSQLSSKLSSELSDRNV 690
           QDELLLLLGEQEHEVRFA+C PIYFGSLD+ HV+  +SRKSLWLSQLS KLS+ELSDRNV
Sbjct: 582 QDELLLLLGEQEHEVRFAHCRPIYFGSLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNV 641

Query: 691 QNFGEYLQVESFTLSICSKESCPYRTTNRIENESAA-AFYCCSWLVADEVLAWQIISILE 750
           QN GEYLQVES TLSICSKE+CPYRTTNRIENES A  F CCSWLVADE+LAW+IISILE
Sbjct: 642 QNLGEYLQVESITLSICSKENCPYRTTNRIENESTAMVFCCCSWLVADEILAWKIISILE 701

Query: 751 KHDLSST 753
           KHDL ST
Sbjct: 702 KHDLGST 708

[Close]

BLAST of Cp4.1LG16g01800 vs. TAIR 10
Match: AT2G01730.1 (cleavage and polyadenylation specificity factor 73 kDa subunit-II )

HSP 1 Score: 840.1 bits (2169), Expect = 1.4e-243
Identity = 417/670 (62.24%), Postives = 496/670 (74.03%), Query Frame = 0


Query: 82  MTIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVL 141
           M IDCLVLGAGQE+GKSCVVVTINGK+IMFDCGMHMG  DH RYP+FS IS S D++  +
Sbjct: 1   MAIDCLVLGAGQEIGKSCVVVTINGKKIMFDCGMHMGCDDHNRYPNFSLISKSGDFDNAI 60

Query: 142 SCVIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQF 201
           SC+IITHFH+DH+GALPYFTEVCGYNGPIYM+YPT AL+PLMLEDYR+VMVDRRGE E F
Sbjct: 61  SCIIITHFHMDHVGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEELF 120

Query: 202 SNDHIMECMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM 261
           +  HI  CMKKVI +DLKQTIQVDEDLQIRAYYAGHVLGA M YAK+GDAA+VYTGDYNM
Sbjct: 121 TTTHIANCMKKVIAIDLKQTIQVDEDLQIRAYYAGHVLGAVMVYAKMGDAAIVYTGDYNM 180

Query: 262 TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA 321
           T DRHLGAA+IDR+QLDLLI+ESTYATTIR SKY REREFL+AVH CVA GGK LIP+FA
Sbjct: 181 TTDRHLGAAKIDRLQLDLLISESTYATTIRGSKYPREREFLQAVHKCVAGGGKALIPSFA 240

Query: 322 LGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFD 381
           LGRAQELC+LLDDYWERMN+K+PIYFS+GLT+QANMYYKMLISWTSQ VKE + T N FD
Sbjct: 241 LGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQNVKEKHNTHNPFD 300

Query: 382 FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGH 441
           FKNV+ FDRS+I APGPCVLFATPGM+  GFSLEVFK WAPS LNL+ LPGY VAGT+GH
Sbjct: 301 FKNVKDFDRSLIHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGH 360

Query: 442 KLMSGKPTKIDLDKDTQID----IHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM 501
           KLM+GKPT +DL   T++D    +HQ+AFSPHTD+KGIMDL KFLSPK+V+LVHGEKP M
Sbjct: 361 KLMAGKPTTVDLYNGTKVDVRCKVHQVAFSPHTDAKGIMDLTKFLSPKNVVLVHGEKPSM 420

Query: 502 VTLKERIHSELGIPCHDPANNETVSISSTLSIKAESSSTFIQSCSTPNFKFLKRNLNDKI 561
           + LKE+I SEL IPC  PAN ETVS +ST  IKA +S  F++SCS PNFKF         
Sbjct: 421 MILKEKITSELDIPCFVPANGETVSFASTTYIKANASDMFLKSCSNPNFKF--------- 480

Query: 562 NSKELSSKEGGTSSMFIRRRSNPHVKHLNRNLDEKFDSSLSCGPEIEVSDDRVNEGILVM 621
                                                   S   ++ V+D R  +G+LV+
Sbjct: 481 ----------------------------------------SNSTQLRVTDHRTADGVLVI 540

Query: 622 EKGKKTKVVHQDELLLLLGEQEHEVRFANCSPIYF-GSLDDTHVIVCISRKSLWLSQLSS 681
           EK KK K+VHQDE+  +L E+ H V  A+C P+   G  +D  V +        + QLS+
Sbjct: 541 EKSKKAKIVHQDEISEVLHEKNHVVSLAHCCPVKVKGESEDDDVDL--------IKQLSA 600

Query: 682 KLSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLVADEV 741
           K+   +S   +      LQV SF  S+C K+ C +R+++   + S A F CC+W +AD  
Sbjct: 601 KILKTVSGAQIHESENCLQVASFKGSLCLKDKCMHRSSS---SSSEAVFLCCNWSIADLE 610

Query: 742 LAWQIISILE 747
           L W+II+ ++
Sbjct: 661 LGWEIINAIK 610

[Close]

BLAST of Cp4.1LG16g01800 vs. TAIR 10
Match: AT1G61010.1 (cleavage and polyadenylation specificity factor 73-I )

HSP 1 Score: 301.6 bits (771), Expect = 1.8e-81
Identity = 160/426 (37.56%), Postives = 239/426 (56.10%), Query Frame = 0


Query: 89  LGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVLSCVIITH 148
           LGAG EVG+SCV ++  GK I+FDCG+H  Y      P F  I  S      +  ++ITH
Sbjct: 27  LGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGMAALPYFDEIDPSS-----IDVLLITH 86

Query: 149 FHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQFSNDHIME 208
           FH+DH  +LPYF E   +NG ++MT+ T A+  L+L DY KV      E   F    I +
Sbjct: 87  FHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFDEQDINK 146

Query: 209 CMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLG 268
            M K+  +D  QT++V+  ++   Y AGHVLGAAMF   +    ++YTGDY+   DRHL 
Sbjct: 147 SMDKIEVIDFHQTVEVN-GIKFWCYTAGHVLGAAMFMVDIAGVRILYTGDYSREEDRHLR 206

Query: 269 AAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQEL 328
           AA++ +   D+ I EST    +  S++ RE+ F   +H+ VA GG+VLIP FALGRAQEL
Sbjct: 207 AAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVAQGGRVLIPAFALGRAQEL 266

Query: 329 CILLDDYWERMN--LKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFDFKNVQ 388
            ++LD+YW        IPIY+++ L  +    Y+  I   + +++  +   N F FK++ 
Sbjct: 267 LLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMNDRIRNQFANSNPFVFKHIS 326

Query: 389 KFDR-SMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMS 448
             +     +  GP V+ ATPG +  G S ++F  W   K N   +PGY V GT+  K + 
Sbjct: 327 PLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKNACIIPGYMVEGTLA-KTII 386

Query: 449 GKPTKI----DLDKDTQIDIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMVTLK 508
            +P ++     L     + +H ++FS H D       +K L P ++ILVHGE  +M+ LK
Sbjct: 387 NEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNIILVHGEANEMMRLK 444

[Close]

BLAST of Cp4.1LG16g01800 vs. TAIR 10
Match: AT1G61010.2 (cleavage and polyadenylation specificity factor 73-I )

HSP 1 Score: 301.6 bits (771), Expect = 1.8e-81
Identity = 160/426 (37.56%), Postives = 239/426 (56.10%), Query Frame = 0


Query: 89  LGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVLSCVIITH 148
           LGAG EVG+SCV ++  GK I+FDCG+H  Y      P F  I  S      +  ++ITH
Sbjct: 27  LGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGMAALPYFDEIDPSS-----IDVLLITH 86

Query: 149 FHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQFSNDHIME 208
           FH+DH  +LPYF E   +NG ++MT+ T A+  L+L DY KV      E   F    I +
Sbjct: 87  FHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFDEQDINK 146

Query: 209 CMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLG 268
            M K+  +D  QT++V+  ++   Y AGHVLGAAMF   +    ++YTGDY+   DRHL 
Sbjct: 147 SMDKIEVIDFHQTVEVN-GIKFWCYTAGHVLGAAMFMVDIAGVRILYTGDYSREEDRHLR 206

Query: 269 AAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQEL 328
           AA++ +   D+ I EST    +  S++ RE+ F   +H+ VA GG+VLIP FALGRAQEL
Sbjct: 207 AAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVAQGGRVLIPAFALGRAQEL 266

Query: 329 CILLDDYWERMN--LKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFDFKNVQ 388
            ++LD+YW        IPIY+++ L  +    Y+  I   + +++  +   N F FK++ 
Sbjct: 267 LLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMNDRIRNQFANSNPFVFKHIS 326

Query: 389 KFDR-SMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMS 448
             +     +  GP V+ ATPG +  G S ++F  W   K N   +PGY V GT+  K + 
Sbjct: 327 PLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKNACIIPGYMVEGTLA-KTII 386

Query: 449 GKPTKI----DLDKDTQIDIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMVTLK 508
            +P ++     L     + +H ++FS H D       +K L P ++ILVHGE  +M+ LK
Sbjct: 387 NEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNIILVHGEANEMMRLK 444

[Close]

BLAST of Cp4.1LG16g01800 vs. TAIR 10
Match: AT1G61010.3 (cleavage and polyadenylation specificity factor 73-I )

HSP 1 Score: 301.6 bits (771), Expect = 1.8e-81
Identity = 160/426 (37.56%), Postives = 239/426 (56.10%), Query Frame = 0


Query: 89  LGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVLSCVIITH 148
           LGAG EVG+SCV ++  GK I+FDCG+H  Y      P F  I  S      +  ++ITH
Sbjct: 27  LGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGMAALPYFDEIDPSS-----IDVLLITH 86

Query: 149 FHLDHIGALPYFTEVCGYNGPIYMTYPTLALAPLMLEDYRKVMVDRRGEAEQFSNDHIME 208
           FH+DH  +LPYF E   +NG ++MT+ T A+  L+L DY KV      E   F    I +
Sbjct: 87  FHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFDEQDINK 146

Query: 209 CMKKVIPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLG 268
            M K+  +D  QT++V+  ++   Y AGHVLGAAMF   +    ++YTGDY+   DRHL 
Sbjct: 147 SMDKIEVIDFHQTVEVN-GIKFWCYTAGHVLGAAMFMVDIAGVRILYTGDYSREEDRHLR 206

Query: 269 AAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQEL 328
           AA++ +   D+ I EST    +  S++ RE+ F   +H+ VA GG+VLIP FALGRAQEL
Sbjct: 207 AAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVAQGGRVLIPAFALGRAQEL 266

Query: 329 CILLDDYWERMN--LKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFDFKNVQ 388
            ++LD+YW        IPIY+++ L  +    Y+  I   + +++  +   N F FK++ 
Sbjct: 267 LLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMNDRIRNQFANSNPFVFKHIS 326

Query: 389 KFDR-SMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMS 448
             +     +  GP V+ ATPG +  G S ++F  W   K N   +PGY V GT+  K + 
Sbjct: 327 PLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKNACIIPGYMVEGTLA-KTII 386

Query: 449 GKPTKI----DLDKDTQIDIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMVTLK 508
            +P ++     L     + +H ++FS H D       +K L P ++ILVHGE  +M+ LK
Sbjct: 387 NEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNIILVHGEANEMMRLK 444

[Close]

BLAST of Cp4.1LG16g01800 vs. TAIR 10
Match: AT5G23880.1 (cleavage and polyadenylation specificity factor 100 )

HSP 1 Score: 152.9 bits (385), Expect = 1.0e-36
Identity = 103/363 (28.37%), Postives = 174/363 (47.93%), Query Frame = 0


Query: 101 VVTINGKRIMFDCGMHMGYLDHRRYPDFSRISASRDYNTVLSCVIITHFHLDHIGALPYF 160
           +V+I+G   + DCG +    D       SR++++ D       V+++H    HIGALPY 
Sbjct: 22  LVSIDGFNFLIDCGWN-DLFDTSLLEPLSRVASTID------AVLLSHPDTLHIGALPYA 81

Query: 161 TEVCGYNGPIYMTYPTLALAPLMLEDY---RKVMVDRRGEAEQFSNDHIMECMKKVIPVD 220
            +  G + P+Y T P   L  L + D    RK + D     + F+ D I    + VI + 
Sbjct: 82  MKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSD----FDLFTLDDIDSAFQNVIRLT 141

Query: 221 LKQTIQVD---EDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDR 280
             Q   +    E + I  + AGH+LG +++        ++Y  DYN   +RHL    +  
Sbjct: 142 YSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKERHLNGTVLQS 201

Query: 281 -MQLDLLITESTYAT-TIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILL 340
            ++  +LIT++ +A  T + ++  R++EFL  +   +  GG VL+P    GR  EL ++L
Sbjct: 202 FVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTAGRVLELLLIL 261

Query: 341 DDYWERMNLKIPIYFSAGLTVQANMYYKMLISWTSQKVKETYTTR--NAFDFKNVQ-KFD 400
           + +W +     PIYF   ++     Y K  + W S  + +++ T   NAF  ++V    +
Sbjct: 262 EQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAFLLRHVTLLIN 321

Query: 401 RSMID--APGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGK 451
           ++ +D   PGP V+ A+   +  GF+ E+F  WA    NL+        GT+   L S  
Sbjct: 322 KTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFGTLARMLQSAP 373

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g01800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GUU3	1.9e-242	62.24	Cleavage and polyadenylation specificity factor subunit 3-II OS=Arabidopsis thal...	[more]
Q54YL3	9.5e-173	56.50	Integrator complex subunit 11 homolog OS=Dictyostelium discoideum OX=44689 GN=in...	[more]
Q5ZIH0	5.2e-163	58.89	Integrator complex subunit 11 OS=Gallus gallus OX=9031 GN=INTS11 PE=2 SV=1	[more]
Q9CWS4	8.9e-163	53.82	Integrator complex subunit 11 OS=Mus musculus OX=10090 GN=Ints11 PE=1 SV=1	[more]
Q3MHC2	1.2e-162	53.82	Integrator complex subunit 11 OS=Rattus norvegicus OX=10116 GN=Ints11 PE=2 SV=1	[more]

BLAST of Cp4.1LG16g01800 vs. NCBI nr


Match Name	Identity	Description
XP_023513382.1	99.41	cleavage and polyadenylation specificity factor subunit 3-II [Cucurbita pepo sub...	[more]
XP_022986472.1	98.37	cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Cucurbi...	[more]
XP_022944195.1	98.52	cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Cucurbi...	[more]
KAG7011001.1	95.02	Cleavage and polyadenylation specificity factor subunit 3-II [Cucurbita argyrosp...	[more]
XP_038901162.1	89.38	cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Beninca...	[more]

BLAST of Cp4.1LG16g01800 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1J7M0	98.37	cleavage and polyadenylation specificity factor subunit 3-II isoform X1 OS=Cucur...	[more]
A0A6J1FYI7	98.52	cleavage and polyadenylation specificity factor subunit 3-II isoform X1 OS=Cucur...	[more]
A0A1S3C9L2	89.69	cleavage and polyadenylation specificity factor subunit 3-II OS=Cucumis melo OX=...	[more]
A0A0A0LQW3	88.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G435430 PE=3 SV=1	[more]
Q6E435	89.96	ACT11D09.9 OS=Cucumis melo OX=3656 GN=ACT11D09.9 PE=3 SV=1	[more]

BLAST of Cp4.1LG16g01800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01730.1	1.4e-243	62.24	cleavage and polyadenylation specificity factor 73 kDa subunit-II	[more]
AT1G61010.1	1.8e-81	37.56	cleavage and polyadenylation specificity factor 73-I	[more]
AT1G61010.2	1.8e-81	37.56	cleavage and polyadenylation specificity factor 73-I	[more]
AT1G61010.3	1.8e-81	37.56	cleavage and polyadenylation specificity factor 73-I	[more]
AT5G23880.1	1.0e-36	28.37	cleavage and polyadenylation specificity factor 100	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001279	Metallo-beta-lactamase	SMART	SM00849	Lactamase_B_5a	coord: 96..313 e-value: 1.8E-20 score: 84.0
IPR001279	Metallo-beta-lactamase	PFAM	PF16661	Lactamase_B_6	coord: 102..273 e-value: 3.1E-19 score: 69.1
IPR022712	Beta-Casp domain	SMART	SM01027	Beta_Casp_2	coord: 325..443 e-value: 1.3E-34 score: 130.9
IPR022712	Beta-Casp domain	PFAM	PF10996	Beta-Casp	coord: 325..443 e-value: 2.7E-22 score: 79.2
IPR011108	Zn-dependent metallo-hydrolase, RNA specificity domain	PFAM	PF07521	RMMBL	coord: 458..513 e-value: 1.9E-12 score: 47.0
IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	GENE3D	3.60.15.10		coord: 89..504 e-value: 6.3E-136 score: 455.1
IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	SUPERFAMILY	56281	Metallo-hydrolase/oxidoreductase	coord: 84..524
None	No IPR available	GENE3D	3.40.50.10890		coord: 293..470 e-value: 6.3E-136 score: 455.1
None	No IPR available	PANTHER	PTHR11203:SF37	INTEGRATOR COMPLEX SUBUNIT 11	coord: 82..747
None	No IPR available	PANTHER	PTHR11203	CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER	coord: 82..747
IPR041897	Integrator complex subunit 11, MBL-fold	CDD	cd16291	INTS11-like_MBL-fold	coord: 86..284 e-value: 1.06567E-130 score: 383.92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g01800.1	Cp4.1LG16g01800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010197	polar nucleus fusion
biological_process	GO:0016180	snRNA processing
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus