Cp4.1LG16g01220 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g01220
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	CBS domain-containing protein CBSX1, chloroplastic-like
Location	Cp4.1LG16: 2665307 .. 2668465 (-)
RNA-Seq Expression	Cp4.1LG16g01220
Synteny	Cp4.1LG16g01220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCGATTGGTTGTAGTTTCACTTCCTTATCGCTTCCGCAATTTAGGGCCAATAGTTTTTCGATTCAGGAGCTGTTGTTTGGTCCTCGTCGGAGGCCTCCATCGCCGATTGTTCATGCATCGGTTTCTCAGAGCTTTCCGGCGTCTTCTCGCTTTCCGGAGCAGCGGAAATCTACTTCTCTTTCCGCTAGCGGCACCTTGATGGCCAATTCCGCGCCGGTGTGTTGTTCTGTTTTCTTTTTTTGTTCGTAGTGGTGAATTCGAGTTATTGATTATCTTGTCTCGAATGTTTCGTTGTGATTGAGATGAATATACTTGATTTACCAAAAGAAACTTCCGTCTAGGCCTTTGATTTACCAAAATATAGTACTTCACTGCTAAAAAATTCTTCCCCCTCACGTTCTCTGCTTAAAACCAACCAGATGATCATATATAAGTCCATTCTGAAATAAATCCTGAAAAAAATTCCTTATAGTCTGTCTTCCTCTACAGAACGCTCTCAAGTTAGTGGATGCTGTTCGTGAAAAAAAGTGTTTACTATCTCCTTCTTTGATCCACTCACTTTGGAATTGAAATATATACTCATGATCATTGTTCTACTGAATAGCTGTATTATTTTTTTTCCAGGGTGTTAGAAATTTATTCTTCTTTCTTTAATATTTTGATATGCAGTCGAGAAGTGGTGTATACACAGTTGGTGACTTCATGACTAGGAGAGAGGAGTTGCATGTCGTAAAGCCCACAACCAGTGTCGATGAAGGTAATTGAAATTTATGGATATTTTCTTCCAAACTATTGGAAAAATGTGGCTTATATTGTGTCTGTTTATGCATACAGCATTAGAAATTCTGGTGGAAAAAAGGATCACGGGATTTCCAGTAATTGATGACAATTGGAACTTGGTATCATTTCATTTCCCATATTTATAAGACAGATTTCTCTTCTATGGTTATGTGTTTATCTTGTTGCCCTGTTTGCAAGTACTTCTGAAGTTGTTGAGCTCTGTCCAGGATTTTCCATCAAATTGTTTACGTGATTTGTCAAGCTTTTACTTTTCACACTATGGCTTGTATGATCATGAGAGAATCTAATTTGCAGTACTTCCCCATCCAGAATTAAATTGGGAATCCATTTTTAATGCTTATAATTTGTGTAAATGCTCATGTGAATTTCTTTGTGGACCCGTTTAACTGCGTATGATTGATTCAAGTGGCCTAACATTGGATATTCGATCATCGACCCTCATAATAGAAATTACTTCATGATGTAGGTTGGCGTAGTTTCAGACTATGACTTGTTAGCGCTAGACTCCATCTCAGGTATATTTGAAATTTCTTGTTATTCCTGTCAACATGTTGTCTGCTTCCACTCTTTACCACTACCATTGTTTATCCTGTTTGAAAAAGATTGCTTAGCTATGATTGTTTTTCAGCGAAGTTACCTAAAGCGTTAAAGAAGAGAGAATTTAGCTTTTCTAGTATCATTTATCACTCGTGAATTATGTTAGCCATCACCTTAATCTGAGAATATTTGAGGTTGGAGAAGAGGGTGAAGAATGTAGCAAATTCTTGTTATTATGAACTTTGAGTCATTCTTTGATCTCAAAGAAAAGTGACTAATTTCCTTTTCTATATTACAAATAATTTAGTAATTTGACGAAATTGGTATGACTGCACTTATACAAGTTCCAAGTCAATGTTATAATTAGGTGGTGGAAGGACAGATCCAAGTATGTTTCCTGAAGTTGACAGCTCCTGGAAAGTATGCAATTACCTCCTTTTCTGGCGTTTATTTGCAGTTATTTTGTTTCACATCTTTTGCCATCAGTGTTCCTGATGACTTTATTTGTGCAATGATTTCATCCAAGTATTAAAAGAAGTAGAAAACTCAACTTTATATATATAAAAAAAAAGTAGATAAAGTAAAAGTTACTGATTAGTTCGTTGAAAAGCGCTTTATTTCACGAGTTTTAAGTCACAAATGCCACCAACAGGTCAGGCTATATTTGCAAGAAGCATGAATTTAAGTTTACTTGGTTAAAGATTTCTTTCTCGAGCATAGTGTTTATTTCTCACTGATCACTGATTTAGGCCTTGATTTGTCTCTTCATTTATGCTTTTGATTCTTTTTTGTTCATGAACCTCGGTGTCGGATTTGACAATGGGCAAATGAAGGGTAAACTATGCATTTTAACAAAATAATTATGCTTTTTCCTACTTTTCATGGTACAAATGACCAAAAACCTTCAATAGTTCTGACTTCAAATTCATGTTAATCTGTCATTTACTTATTTCAATAGTCTGCTACTCACTAGTTTGTAGAGGACGTGAAATGGAAGTGATTTCTCTAATCCAAACTCATCCTTGTAGACATTCAATGAGGTACAAAGGCTCCTCAGCAAAACGAACGGAAAGGTGATCGGCGATTTGATGACACCGGCACCTCTTGTCGTTCGAGAAACCACCAATCTTGAGGATGCTGCTAGGTTTTTACATGCTTGTCTCTTCCCGTGTATCTTCCAACTGTTTTCTGGTGTCAGAATTTTGAAGCATTCCTTTCTGTTTACCAAATGCAGATTATTGCTTAAGACAAAGTATCGCCGGCTACCAGTGGTAGATGCCAAGGGAAAGCTGGTAAGAGATCTATTCTTCTACTGTTCTAATTTGAATGAATGGTTGAGTTGTTGTAGTGTGTAGCGTAAAATGATGAAATCTTTATTAATGAAGGTTGGAATTATTACAAGAGGCAATGTGGTAAGAGCTGCTCTACAAATGAAGCATGCCCAAGAAAACTGAACATCATTTTCTCAAATCTTGCATGCTGTTAGGTTAGCACACAGGATTCTGAAGTGCAATCATACAGTTTTGGCTCATGATTATATGAACATCATCATGATTATATTGTGTTGTAGTTGGTGATTTGAGCAAGCTGTAGAAGTTGGGAATTAGGTATTAGACCAGACTTTTAAAGTGTCAAATAGGCATCAGGCTATTCAATGTTTGTATTTTTCTAGTACTTTTAATGCTCAAGCTTGAAATTAAATCTTTGTATTTAATACAAAATTAAAATTCTAAACATTTATTGCTTTGGGTATGAATTAAACTCTAATGTAATCTAAGGCAGAGTCCGTGAGTAGGTAAAATTTTGAATTATGGT

mRNA sequence

ATGGATTTCACTTCCTTATCGCTTCCGCAATTTAGGGCCAATAGTTTTTCGATTCAGGAGCTGTTGTTTGGTCCTCGTCGGAGGCCTCCATCGCCGATTGTTCATGCATCGGTTTCTCAGAGCTTTCCGGCGTCTTCTCGCTTTCCGGAGCAGCGGAAATCTACTTCTCTTTCCGCTAGCGGCACCTTGATGGCCAATTCCGCGCCGTCGAGAAGTGGTGTATACACAGTTGGTGACTTCATGACTAGGAGAGAGGAGTTGCATGTCGTAAAGCCCACAACCAGTGTCGATGAAGCATTAGAAATTCTGGTGGAAAAAAGGATCACGGGATTTCCAGTAATTGATGACAATTGGAACTTGGTTGGCGTAGTTTCAGACTATGACTTGTTAGCGCTAGACTCCATCTCAGGTGGTGGAAGGACAGATCCAAGTATGTTTCCTGAAGTTGACAGCTCCTGGAAAACATTCAATGAGGTACAAAGGCTCCTCAGCAAAACGAACGGAAAGGTGATCGGCGATTTGATGACACCGGCACCTCTTGTCGTTCGAGAAACCACCAATCTTGAGGATGCTGCTAGATTATTGCTTAAGACAAAGTATCGCCGGCTACCAGTGGTAGATGCCAAGGGAAAGCTGGTTGGAATTATTACAAGAGGCAATGTGGTAAGAGCTGCTCTACAAATGAAGCATGCCCAAGAAAACTGAACATCATTTTCTCAAATCTTGCATGCTGTTAGGTTAGCACACAGGATTCTGAAGTGCAATCATACAGTTTTGGCTCATGATTATATGAACATCATCATGATTATATTGTGTTGTAGTTGGTGATTTGAGCAAGCTGTAGAAGTTGGGAATTAGGTATTAGACCAGACTTTTAAAGTGTCAAATAGGCATCAGGCTATTCAATGTTTGTATTTTTCTAGTACTTTTAATGCTCAAGCTTGAAATTAAATCTTTGTATTTAATACAAAATTAAAATTCTAAACATTTATTGCTTTGGGTATGAATTAAACTCTAATGTAATCTAAGGCAGAGTCCGTGAGTAGGTAAAATTTTGAATTATGGT

Coding sequence (CDS)

ATGGATTTCACTTCCTTATCGCTTCCGCAATTTAGGGCCAATAGTTTTTCGATTCAGGAGCTGTTGTTTGGTCCTCGTCGGAGGCCTCCATCGCCGATTGTTCATGCATCGGTTTCTCAGAGCTTTCCGGCGTCTTCTCGCTTTCCGGAGCAGCGGAAATCTACTTCTCTTTCCGCTAGCGGCACCTTGATGGCCAATTCCGCGCCGTCGAGAAGTGGTGTATACACAGTTGGTGACTTCATGACTAGGAGAGAGGAGTTGCATGTCGTAAAGCCCACAACCAGTGTCGATGAAGCATTAGAAATTCTGGTGGAAAAAAGGATCACGGGATTTCCAGTAATTGATGACAATTGGAACTTGGTTGGCGTAGTTTCAGACTATGACTTGTTAGCGCTAGACTCCATCTCAGGTGGTGGAAGGACAGATCCAAGTATGTTTCCTGAAGTTGACAGCTCCTGGAAAACATTCAATGAGGTACAAAGGCTCCTCAGCAAAACGAACGGAAAGGTGATCGGCGATTTGATGACACCGGCACCTCTTGTCGTTCGAGAAACCACCAATCTTGAGGATGCTGCTAGATTATTGCTTAAGACAAAGTATCGCCGGCTACCAGTGGTAGATGCCAAGGGAAAGCTGGTTGGAATTATTACAAGAGGCAATGTGGTAAGAGCTGCTCTACAAATGAAGCATGCCCAAGAAAACTGA

Protein sequence

MDFTSLSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGTLMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVRETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN

Homology

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BLAST of Cp4.1LG16g01220 vs. ExPASy Swiss-Prot
Match: O23193 (CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX1 PE=1 SV=2)

HSP 1 Score: 297.0 bits (759), Expect = 1.9e-79
Identity = 156/226 (69.03%), Postives = 182/226 (80.53%), Query Frame = 0


Query: 6   LSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGTLMA 65
           LS    RA+S      L  PR     P    + S+SFP+ SR P    S S +A  TLM 
Sbjct: 10  LSFTPLRASSSPSSPYLLLPRFLSVQPCHKFTFSRSFPSKSRIP----SASSAAGSTLMT 69

Query: 66  NSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVS 125
           NS+  RSGVYTVG+FMT++E+LHVVKPTT+VDEALE+LVE RITGFPVID++W LVG+VS
Sbjct: 70  NSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVS 129

Query: 126 DYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVRET 185
           DYDLLALDSISG GRT+ SMFPEVDS+WKTFN VQ+LLSKTNGK++GDLMTPAPLVV E 
Sbjct: 130 DYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEK 189

Query: 186 TNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHA 232
           TNLEDAA++LL+TKYRRLPVVD+ GKLVGIITRGNVVRAALQ+K +
Sbjct: 190 TNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRS 231

[Close]

BLAST of Cp4.1LG16g01220 vs. ExPASy Swiss-Prot
Match: Q9C5D0 (CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX2 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.2e-70
Identity = 141/221 (63.80%), Postives = 175/221 (79.19%), Query Frame = 0


Query: 32  PIVHASVSQSF-PASSR------FPEQRKSTSLSASGTLMA-----------NSAPSRSG 91
           P++ +   QSF P SS          +R+S++ S S T+ A           NS P+++G
Sbjct: 16  PLLTSLYHQSFLPISSSSFSLLPLSNRRRSSTFSPSITVSAFFAAPASVNNNNSVPAKNG 75

Query: 92  VYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVSDYDLLALD 151
            YTVGDFMT R+ LHVVKP+TSVD+ALE+LVEK++TG PVIDDNW LVGVVSDYDLLALD
Sbjct: 76  GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALD 135

Query: 152 SISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVRETTNLEDAAR 211
           SISG  + D ++FP+VDS+WKTFNE+Q+L+SKT GKV+GDLMTP+PLVVR++TNLEDAAR
Sbjct: 136 SISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAAR 195

Query: 212 LLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 235
           LLL+TK+RRLPVVDA GKL+GI+TRGNVVRAALQ+K   EN
Sbjct: 196 LLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRETEN 236

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BLAST of Cp4.1LG16g01220 vs. ExPASy Swiss-Prot
Match: Q58821 (Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1426 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.9e-10
Identity = 38/143 (26.57%), Postives = 77/143 (53.85%), Query Frame = 0


Query: 89  VVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVSDYDLL--ALDSISGGGRTDPSMF 148
           VV     + + + +  + +I+G PV++ +  LVG++S+ D++   +          PS  
Sbjct: 26  VVYEDNDLIDVIRLFRKNKISGAPVLNKDGKLVGIISESDIVKTIVTHNEDLNLILPSPL 85

Query: 149 PEVDSSWKTFNEVQRLLSKTNGKV---IGDLMTPAPLVVRETTNLEDAARLLLKTKYRRL 208
             ++   KT  +++  +      +   + D+MT   +V +    + DAA+L++K   +RL
Sbjct: 86  DLIELPLKTALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMTINDAAKLMVKNNIKRL 145

Query: 209 PVVDAKGKLVGIITRGNVVRAAL 227
           PVVD +G L+GI+TRG+++ A +
Sbjct: 146 PVVDDEGNLIGIVTRGDLIEALI 168

[Close]

BLAST of Cp4.1LG16g01220 vs. ExPASy Swiss-Prot
Match: O58045 (Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=guaB PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08
Identity = 38/138 (27.54%), Postives = 70/138 (50.72%), Query Frame = 0


Query: 85  EELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVSDYDLLALDSISGGGRTDPS 144
           E++  + P  +VD AL ++ +  I G PV++D   +VG+++  D+ A +           
Sbjct: 101 EDVITIAPDETVDFALFLMEKHGIDGLPVVEDE-KVVGIITKKDIAARE----------- 160

Query: 145 MFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVRETTNLEDAARLLLKTKYRRLP 204
                                  GK++ +LMT   + V E+  +E+A +++++ +  RLP
Sbjct: 161 -----------------------GKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLP 203

Query: 205 VVDAKGKLVGIITRGNVV 223
           VVD +GKLVG+IT  ++V
Sbjct: 221 VVDERGKLVGLITMSDLV 203

[Close]

BLAST of Cp4.1LG16g01220 vs. ExPASy Swiss-Prot
Match: Q54H97 (CBS domain-containing protein DDB_G0289609 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0289609 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.0e-08
Identity = 40/138 (28.99%), Postives = 69/138 (50.00%), Query Frame = 0


Query: 85  EELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVSDYDLLALDSISGGGRTDPS 144
           + L  +   T++D AL+ L    I   PV+D++ NL G+++D DL           TD  
Sbjct: 11  KSLFTINLDTTLDVALKSLNANSIHRLPVVDNDGNLKGIITDRDLRL--------ATDSP 70

Query: 145 MFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVRETTNLEDAARLLLKTKYRRLP 204
             PE        N   R L K     +  +M   P+ + + + + +AA+L+  T    LP
Sbjct: 71  FLPE--------NNEDR-LEKLRLHKVSSIMKQNPVTIEDFSPVVEAAKLMRVTNVGGLP 130

Query: 205 VVDAKGKLVGIITRGNVV 223
           V+D KG+L+G++TR +++
Sbjct: 131 VLDKKGRLIGMVTRSDLL 131

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BLAST of Cp4.1LG16g01220 vs. NCBI nr
Match: XP_023512672.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 449 bits (1156), Expect = 6.41e-159
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 3   FTSLSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGT 62
           FTSLSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGT
Sbjct: 8   FTSLSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGT 67

Query: 63  LMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVG 122
           LMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVG
Sbjct: 68  LMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVG 127

Query: 123 VVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVV 182
           VVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVV
Sbjct: 128 VVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVV 187

Query: 183 RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 234
           RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN
Sbjct: 188 RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 239

[Close]

BLAST of Cp4.1LG16g01220 vs. NCBI nr
Match: XP_022986137.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 445 bits (1144), Expect = 4.33e-157
Identity = 230/232 (99.14%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 3   FTSLSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGT 62
           FTSLSL QFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGT
Sbjct: 8   FTSLSLAQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGT 67

Query: 63  LMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVG 122
           LMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVG
Sbjct: 68  LMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVG 127

Query: 123 VVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVV 182
           VVSDYDLLALDSISGGGRTDPSMFPEV+SSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVV
Sbjct: 128 VVSDYDLLALDSISGGGRTDPSMFPEVESSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVV 187

Query: 183 RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 234
           RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN
Sbjct: 188 RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 239

[Close]

BLAST of Cp4.1LG16g01220 vs. NCBI nr
Match: KAG6571273.1 (CBS domain-containing protein CBSX1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 441 bits (1135), Expect = 1.02e-155
Identity = 228/232 (98.28%), Postives = 229/232 (98.71%), Query Frame = 0


Query: 3   FTSLSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGT 62
           FTSLSLPQFRANSFSIQELLFGPRRRP SPIVHASVSQSFPASSRFPEQR  TSLSASGT
Sbjct: 8   FTSLSLPQFRANSFSIQELLFGPRRRPQSPIVHASVSQSFPASSRFPEQRNCTSLSASGT 67

Query: 63  LMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVG 122
           LMANSAPSRSGVYTVGDFMTRRE+LHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVG
Sbjct: 68  LMANSAPSRSGVYTVGDFMTRREDLHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVG 127

Query: 123 VVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVV 182
           VVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVV
Sbjct: 128 VVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVV 187

Query: 183 RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 234
           RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN
Sbjct: 188 RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 239

[Close]

BLAST of Cp4.1LG16g01220 vs. NCBI nr
Match: XP_022927962.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 440 bits (1131), Expect = 4.15e-155
Identity = 228/232 (98.28%), Postives = 228/232 (98.28%), Query Frame = 0


Query: 3   FTSLSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGT 62
           FTSLSLPQFRANSFSIQELLFGPRRRP SPIVHASVSQSFPASSRFPEQRKSTSLSASGT
Sbjct: 8   FTSLSLPQFRANSFSIQELLFGPRRRPQSPIVHASVSQSFPASSRFPEQRKSTSLSASGT 67

Query: 63  LMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVG 122
           LMA SAPSRSGVYTVGDFMTRREELHVVKPTT VDEALEILVEKRITGFPVIDDNWNLVG
Sbjct: 68  LMAKSAPSRSGVYTVGDFMTRREELHVVKPTTIVDEALEILVEKRITGFPVIDDNWNLVG 127

Query: 123 VVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVV 182
           VVSDYDLLALDSISGGGRTDPSMFPEVD SWKTFNEVQRLLSKTNGKVIGDLMTPAPLVV
Sbjct: 128 VVSDYDLLALDSISGGGRTDPSMFPEVDRSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVV 187

Query: 183 RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 234
           RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN
Sbjct: 188 RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 239

[Close]

BLAST of Cp4.1LG16g01220 vs. NCBI nr
Match: KAG7011049.1 (CBS domain-containing protein CBSX1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 439 bits (1130), Expect = 5.89e-155
Identity = 228/232 (98.28%), Postives = 229/232 (98.71%), Query Frame = 0


Query: 3   FTSLSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGT 62
           FTSLSLPQFRANSFSIQELLFGPRRRP SPIVHASVSQSFPASSRFPEQR STSLSASGT
Sbjct: 8   FTSLSLPQFRANSFSIQELLFGPRRRPQSPIVHASVSQSFPASSRFPEQRNSTSLSASGT 67

Query: 63  LMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVG 122
           LMANSAPSRSGVYTVGDFMTRRE+LHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVG
Sbjct: 68  LMANSAPSRSGVYTVGDFMTRREDLHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVG 127

Query: 123 VVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVV 182
           VVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMT APLVV
Sbjct: 128 VVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTLAPLVV 187

Query: 183 RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 234
           RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN
Sbjct: 188 RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 239

[Close]

BLAST of Cp4.1LG16g01220 vs. ExPASy TrEMBL
Match: A0A6J1J6R2 (CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111483973 PE=4 SV=1)

HSP 1 Score: 445 bits (1144), Expect = 2.10e-157
Identity = 230/232 (99.14%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 3   FTSLSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGT 62
           FTSLSL QFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGT
Sbjct: 8   FTSLSLAQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGT 67

Query: 63  LMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVG 122
           LMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVG
Sbjct: 68  LMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVG 127

Query: 123 VVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVV 182
           VVSDYDLLALDSISGGGRTDPSMFPEV+SSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVV
Sbjct: 128 VVSDYDLLALDSISGGGRTDPSMFPEVESSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVV 187

Query: 183 RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 234
           RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN
Sbjct: 188 RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 239

[Close]

BLAST of Cp4.1LG16g01220 vs. ExPASy TrEMBL
Match: A0A6J1EIL9 (CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111434810 PE=4 SV=1)

HSP 1 Score: 440 bits (1131), Expect = 2.01e-155
Identity = 228/232 (98.28%), Postives = 228/232 (98.28%), Query Frame = 0


Query: 3   FTSLSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGT 62
           FTSLSLPQFRANSFSIQELLFGPRRRP SPIVHASVSQSFPASSRFPEQRKSTSLSASGT
Sbjct: 8   FTSLSLPQFRANSFSIQELLFGPRRRPQSPIVHASVSQSFPASSRFPEQRKSTSLSASGT 67

Query: 63  LMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVG 122
           LMA SAPSRSGVYTVGDFMTRREELHVVKPTT VDEALEILVEKRITGFPVIDDNWNLVG
Sbjct: 68  LMAKSAPSRSGVYTVGDFMTRREELHVVKPTTIVDEALEILVEKRITGFPVIDDNWNLVG 127

Query: 123 VVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVV 182
           VVSDYDLLALDSISGGGRTDPSMFPEVD SWKTFNEVQRLLSKTNGKVIGDLMTPAPLVV
Sbjct: 128 VVSDYDLLALDSISGGGRTDPSMFPEVDRSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVV 187

Query: 183 RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 234
           RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN
Sbjct: 188 RETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 239

[Close]

BLAST of Cp4.1LG16g01220 vs. ExPASy TrEMBL
Match: A0A6J1D5X3 (CBS domain-containing protein CBSX1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111017921 PE=4 SV=1)

HSP 1 Score: 387 bits (995), Expect = 9.92e-135
Identity = 197/227 (86.78%), Postives = 213/227 (93.83%), Query Frame = 0


Query: 7   SLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGTLMAN 66
           SL QFRANS   Q++LFGPRRRPPSPI+HAS +++FPA+SRFPE RKSTSL+A GTLMAN
Sbjct: 10  SLSQFRANSLLSQQILFGPRRRPPSPIIHASETRNFPAASRFPELRKSTSLAACGTLMAN 69

Query: 67  SAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVSD 126
           S PSRSGVY VGDFMTR+E+LHVVKPTT+VDEALEILVEKRITGFPVIDDNW LVGVVSD
Sbjct: 70  SVPSRSGVYXVGDFMTRKEDLHVVKPTTTVDEALEILVEKRITGFPVIDDNWKLVGVVSD 129

Query: 127 YDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVRETT 186
           YDLLALDSISGG RTD SMFPEVDSSWKTFNEVQRLLSKTNGKV+GDLMTPAPLVVRE T
Sbjct: 130 YDLLALDSISGGVRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMTPAPLVVREIT 189

Query: 187 NLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQE 233
           +LEDAARLLL+TKYRRLPVVDA+GKLVGIITRGNVVRAALQ+KHA E
Sbjct: 190 DLEDAARLLLQTKYRRLPVVDAEGKLVGIITRGNVVRAALQIKHADE 236

[Close]

BLAST of Cp4.1LG16g01220 vs. ExPASy TrEMBL
Match: A0A0A0LSY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G152500 PE=4 SV=1)

HSP 1 Score: 375 bits (962), Expect = 9.83e-130
Identity = 195/231 (84.42%), Postives = 209/231 (90.48%), Query Frame = 0


Query: 4   TSLSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGTL 63
           +SLSL  FRA SFS+QE+LFGP RRP  PI+HASV+QSFP      E RKSTS++ASGTL
Sbjct: 9   SSLSLAPFRAKSFSVQEMLFGPCRRPSLPILHASVAQSFP------ELRKSTSIAASGTL 68

Query: 64  MANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGV 123
           MANS PS +GVY VGDFMTR+EELHVVKPTTSVDEALEILVEKRITGFPVIDDNW LVGV
Sbjct: 69  MANSVPSGTGVYIVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVIDDNWKLVGV 128

Query: 124 VSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVR 183
           VSDYDLLALDSISGGGRTD SMFPEVDSSWKTFNEVQRLLSKTNGKV+GDLMT APLVVR
Sbjct: 129 VSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMTTAPLVVR 188

Query: 184 ETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 234
           E T+LED ARLLL+TKYRRLPVVDA GKLVGIITRGNVVRAALQ+KHA+EN
Sbjct: 189 EITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEEN 233

[Close]

BLAST of Cp4.1LG16g01220 vs. ExPASy TrEMBL
Match: A0A6J1L4N7 (CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499864 PE=4 SV=1)

HSP 1 Score: 374 bits (960), Expect = 2.45e-129
Identity = 193/231 (83.55%), Postives = 210/231 (90.91%), Query Frame = 0


Query: 4   TSLSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGTL 63
           +SLSL QFRA SFS+QELLF P RRP SPIVHASVS+SF  S RF   RKSTS++A+GTL
Sbjct: 9   SSLSLAQFRATSFSVQELLFEPCRRPSSPIVHASVSRSFSTSCRFTGLRKSTSIAANGTL 68

Query: 64  MANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGV 123
           MANS PS +GVYTVGDFMTR+EELHVVKPTT+V+EALEILVEKRITGFPVIDDNW LVGV
Sbjct: 69  MANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGV 128

Query: 124 VSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVR 183
           VSDYDLLALDSISGGG TD SMFPEVDS+WKTFNEVQ LLSKTNGKV+GDLMTP PLVVR
Sbjct: 129 VSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLMTPVPLVVR 188

Query: 184 ETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 234
           E ++LEDAARLLL+TKYRRLPVVDA GKLVGIITRGNVVRAALQ+K A+EN
Sbjct: 189 ENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEEN 239

[Close]

BLAST of Cp4.1LG16g01220 vs. TAIR 10
Match: AT4G36910.1 (Cystathionine beta-synthase (CBS) family protein )

HSP 1 Score: 297.0 bits (759), Expect = 1.4e-80
Identity = 156/226 (69.03%), Postives = 182/226 (80.53%), Query Frame = 0


Query: 6   LSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGTLMA 65
           LS    RA+S      L  PR     P    + S+SFP+ SR P    S S +A  TLM 
Sbjct: 10  LSFTPLRASSSPSSPYLLLPRFLSVQPCHKFTFSRSFPSKSRIP----SASSAAGSTLMT 69

Query: 66  NSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVS 125
           NS+  RSGVYTVG+FMT++E+LHVVKPTT+VDEALE+LVE RITGFPVID++W LVG+VS
Sbjct: 70  NSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVS 129

Query: 126 DYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVRET 185
           DYDLLALDSISG GRT+ SMFPEVDS+WKTFN VQ+LLSKTNGK++GDLMTPAPLVV E 
Sbjct: 130 DYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEK 189

Query: 186 TNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHA 232
           TNLEDAA++LL+TKYRRLPVVD+ GKLVGIITRGNVVRAALQ+K +
Sbjct: 190 TNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRS 231

[Close]

BLAST of Cp4.1LG16g01220 vs. TAIR 10
Match: AT4G34120.1 (Cystathionine beta-synthase (CBS) family protein )

HSP 1 Score: 267.7 bits (683), Expect = 8.8e-72
Identity = 141/221 (63.80%), Postives = 175/221 (79.19%), Query Frame = 0


Query: 32  PIVHASVSQSF-PASSR------FPEQRKSTSLSASGTLMA-----------NSAPSRSG 91
           P++ +   QSF P SS          +R+S++ S S T+ A           NS P+++G
Sbjct: 16  PLLTSLYHQSFLPISSSSFSLLPLSNRRRSSTFSPSITVSAFFAAPASVNNNNSVPAKNG 75

Query: 92  VYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVSDYDLLALD 151
            YTVGDFMT R+ LHVVKP+TSVD+ALE+LVEK++TG PVIDDNW LVGVVSDYDLLALD
Sbjct: 76  GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALD 135

Query: 152 SISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVRETTNLEDAAR 211
           SISG  + D ++FP+VDS+WKTFNE+Q+L+SKT GKV+GDLMTP+PLVVR++TNLEDAAR
Sbjct: 136 SISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAAR 195

Query: 212 LLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 235
           LLL+TK+RRLPVVDA GKL+GI+TRGNVVRAALQ+K   EN
Sbjct: 196 LLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRETEN 236

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g01220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23193	1.9e-79	69.03	CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
Q9C5D0	1.2e-70	63.80	CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
Q58821	1.9e-10	26.57	Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 430...	[more]
O58045	1.3e-08	27.54	Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii (strain ATCC 700...	[more]
Q54H97	3.0e-08	28.99	CBS domain-containing protein DDB_G0289609 OS=Dictyostelium discoideum OX=44689 ...	[more]

BLAST of Cp4.1LG16g01220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512672.1	6.41e-159	100.00	CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita pepo subsp. p...	[more]
XP_022986137.1	4.33e-157	99.14	CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita maxima]	[more]
KAG6571273.1	1.02e-155	98.28	CBS domain-containing protein CBSX1, chloroplastic, partial [Cucurbita argyrospe...	[more]
XP_022927962.1	4.15e-155	98.28	CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita moschata]	[more]
KAG7011049.1	5.89e-155	98.28	CBS domain-containing protein CBSX1, chloroplastic, partial [Cucurbita argyrospe...	[more]

BLAST of Cp4.1LG16g01220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J6R2	2.10e-157	99.14	CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucurbita maxima OX=3...	[more]
A0A6J1EIL9	2.01e-155	98.28	CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucurbita moschata OX...	[more]
A0A6J1D5X3	9.92e-135	86.78	CBS domain-containing protein CBSX1, chloroplastic OS=Momordica charantia OX=367...	[more]
A0A0A0LSY7	9.83e-130	84.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G152500 PE=4 SV=1	[more]
A0A6J1L4N7	2.45e-129	83.55	CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucurbita maxima OX=3...	[more]

BLAST of Cp4.1LG16g01220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36910.1	1.4e-80	69.03	Cystathionine beta-synthase (CBS) family protein	[more]
AT4G34120.1	8.8e-72	63.80	Cystathionine beta-synthase (CBS) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000644	CBS domain	SMART	SM00116	cbs_1	coord: 178..226 e-value: 6.8E-13 score: 58.8 coord: 86..134 e-value: 3.2E-6 score: 36.7
IPR000644	CBS domain	PFAM	PF00571	CBS	coord: 171..224 e-value: 6.3E-15 score: 55.4 coord: 77..131 e-value: 9.6E-14 score: 51.6
IPR000644	CBS domain	PROSITE	PS51371	CBS	coord: 175..233 score: 15.025021
IPR000644	CBS domain	PROSITE	PS51371	CBS	coord: 81..144 score: 13.099818
None	No IPR available	GENE3D	3.10.580.10		coord: 72..232 e-value: 1.0E-70 score: 238.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..64
None	No IPR available	PANTHER	PTHR48108:SF9	CBS DOMAIN-CONTAINING PROTEIN CBSX1, CHLOROPLASTIC-LIKE ISOFORM X1	coord: 41..233
None	No IPR available	PANTHER	PTHR48108	CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTIC	coord: 41..233
None	No IPR available	CDD	cd17789	CBS_pair_plant_CBSX	coord: 84..224 e-value: 5.74925E-86 score: 249.696
None	No IPR available	SUPERFAMILY	54631	CBS-domain pair	coord: 72..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g01220.1	Cp4.1LG16g01220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0009507	chloroplast