Cp4.1LG16g01160 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g01160
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	WD_REPEATS_REGION domain-containing protein
Location	Cp4.1LG16: 2469463 .. 2472449 (-)
RNA-Seq Expression	Cp4.1LG16g01160
Synteny	Cp4.1LG16g01160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGCGACCTTCCGATCGGTCCATCCGATTCGAGAGCGTGTTCTGTTTCTTCATTTCCTTCGAGTTCCAGGCGCAAAGACAGAGACAGAGTTGAATAAACCAAAGCAGATCGATTGTTCATTCAGCAGGTACCATTTGAATCATGCCGCATTAAAGATCTAACGTTAGTGCTTTCGTTATTCTTCTTGATCCAATTTGATTTTATTTTTGAATTCAAGTTACACTCACCTATGTTTATATGACGCGGAAGCTGGAAGGTTGAAATCTCGGTAGAAAAATGGAGTGGAACACGATTCACCATCTGGATCTACGACATGTAGGAAGAGGTCTCAAACCATTGCAACCTCATGCTGCCGCATTTCATTCCCATCAGGCACTCGTTGCCGTCGCCATTGGGACTTACATCGTTGGTCAGTAATTATTTCTGCTTCATTTCCCTTGTGAACTATTTCATTTGGAGCGGTTCTCTCTATTTTTCTATCTCACGCCAATTGACTGGTTTAATTCTGGATCTTACTATAATTGGTAAACGTTCTTATGATAAGGATACTCATCATATGTTATAGGCTGCGGACCTATGAAACGTGCTGATTATTCTTTCTAAATTTCAATATGGAAATGTTTGATGATGAAAATTCAGAGTGGAAGGAGGGGAGCTTGAGAGAATTGCGTAGTCTTTCTCGTGGACTATTTTGCTGTTATTATGTGATCTTATAAGTCATGATACAATGCTCGGAGCCATGTTAGGGACTTGAGTGGTCTGATCATTACTAGGGTTCATATGGTTGTAGTTGAGTTTTCTTTTTTTTTTTTTTGGGAAGAGAAACAGAGAACGGATTTCGTATTTCATTAAATTTACAAAGGGCTAATTGGGGTTACAAGAAACCTCCCAATTAGTTAAAATATCACCAAGAGAATAGTTACAAAAAAAAAAATTCCCAAGCTGTAACGTGGTTGTAGAATTATACTTGCTATTTAGCCTTTCCCCAGCTGAAATTGGCAAAAATGCTATTTTACCTAGGAGTTAGGCCTCTGCTCGATCTCTTTTTTGTGCTTCTCACTTAAAAGGAAACCTAGTTTTTGACACTGTTCCTGAATGATGGTAGTCATAATTAATGGCCATATTGTTATAAACTTAGTATCTGGCAATCTTATTAATCAAGTTTGAAAAGCATTTCTTATATTAGCCTATTTCTTTCTGGTTAAGCACTGTAACCTTTTTGAATGATGTTTTTTCACGTTACTTTTTTGGCCACAGAATGTGATGCATTAACTGGTTGCAAGATCTCTTCCATTAACATTGGTGCTCGAGTTGTTCGCATGTCTTATAGCCCCACAAGTGGGCATGCCGTGATTGCAATGCTCGAGGTTGGTCCATTATATATGATATTTTTCAACACTCGAGTTTTTTATTTTTCCTTTTTTCCCAAATATTATATTTTTTCAAGAAACCAAATTTTATTGAGAAAAATAAAAGAATAGACAGTAGTTTTGTGAGAGAGGTGGAGATATTGTGCGAGGAAGTTTGGGAGGTTTATGGGTGTAATGCCGCCTTGTAGGTATCGGTTACACAACCTGTTTGTAATCACGAGCTAGGTTTTATTCGGTTGGGTTGAAGTTTTTTTTTGTAGTTAGGTGCAGATGCCCTTTTTGCTTGTCATGTGGATTAATGACCATATTTAGAGGTACTCTTCTTTGGTATTGGGGTTGCAATGATATGTCTTGTGCAAATACACTATTGGGGACTTAATCATGTTTTGTGGAGAATGTGAGTGAGCAAATTTGCCTTGGAACATTCTTTTTGAGATTTTTGGTGTGTGTTTGACTTGAATAGATTATGCCACTTGACATAGACAGAGGTTTACTTCCAGTCACTATATTGGGACAACAAACAAGGGATGAGCCCTTTTGGTGTGCAACATTCTTTTTTGTTATTTTATTGAAATTTTGGCTCGAGAAAAACGAAAGTCCTGTGGTAGATATGGTCTATAGCTAGGCTTAATTTTGGCTTGTATTTAAGGCATATCTTTGTCTTGTATTCTTAACAAACAGAGCCCTTTTCGTAATCTCATATTTTAGTTGTCAGAATAATGTGTATTGCAATGTTTGTGAGGAGAATCAGTTGGATCTCTTCTTTACTTGTTCTTTTGCTGTCTTTTGCTAGTGCAATCTTTCCAACATCTTTAATGTTGGTTGGTGCTTCGCAAATAATGCCTGGGATGCTTCCTTCTAACTCATCTTTTTATAGGAATAAAAACAATTTCATTGGTTGCTGAAATATATTGCAAAAGGAAATCCTCTCAGAGAATAATTAATGAGAAATGAGTACAGATAAACTACAGTTACAAAATTGAGGAGATGATCTTCAAGATAAAGCTAGAAAAGAAAAATTAATAAAAATATTGATGTTATGGTGTTTATCTGAGAAGATTCCAGCATTTATTTTCTTTTTTTACCAAAGGTTAATGAAGTTGCTCCACAAAATCTTTTGCCTTTCTTGAACGGATGTCCGCTGAGAGATAGATGGAGGAGAGTGAAGATATCCCATGGTCTTGTAATAGTCCAGCCAAAAGATTATTGTAGATAAGTCAGCAAACGGGCAGTTGCTGAACAAATGAATTTGAGACTCAGGTTCTTTAAGAAAAAGCGACAGCAACTTGGTGAGATAGCTAACCAAGGAGATCTTAGTTGGAGCATATCATAAGTATGAATTCAAGCGTGGTTAATCTTCCAAGGAAAAAACTATACATTTTTGAGGCAATGACACTTCCCAATCTGTTGATAAAAAAAAATATTCGTAAGGTTTCTAGCAGATGCCAGCTTCTTCGTCAATGAGCTGGAAAAAAAGAGACCATACTTCTTCGAAGTCGTACGTCAAATGCCCTCTTGATTCGATGAAGCAAAGCTCACAACTGAAATGAAAGCTTGGCCCATTCCCCTTCCAACTCATTTAAGGAATTCACTTCAGTGGTTAAGTGAAGACTTTTT

mRNA sequence

TAGCGACCTTCCGATCGGTCCATCCGATTCGAGAGCGTGTTCTGTTTCTTCATTTCCTTCGAGTTCCAGGCGCAAAGACAGAGACAGAGTTGAATAAACCAAAGCAGATCGATTGTTCATTCAGCAGTTACACTCACCTATGTTTATATGACGCGGAAGCTGGAAGGTTGAAATCTCGGTAGAAAAATGGAGTGGAACACGATTCACCATCTGGATCTACGACATGTAGGAAGAGGTCTCAAACCATTGCAACCTCATGCTGCCGCATTTCATTCCCATCAGGCACTCGTTGCCGTCGCCATTGGGACTTACATCGTTGAATGTGATGCATTAACTGGTTGCAAGATCTCTTCCATTAACATTGGTGCTCGAGTTGTTCGCATGTCTTATAGCCCCACAAGTGGGCATGCCGTGATTGCAATGCTCGAGGTTGGTCCATTATATATGATATTTTTCAACACTCGAGTTTTTTATTTTTCCTTTTTTCCCAAATATTATATTTTTTCAAGAAACCAAATTTTATTGAGAAAAATAAAAGAATAGACAGTAGTTTTGTGAGAGAGGTGGAGATATTGTGCGAGGAAGTTTGGGAGGTTTATGGGTGTAATGCCGCCTTGTAGGTATCGGTTACACAACCTGTTTGTAATCACGAGCTAGGTTTTATTCGGTTGGGTTGAAGTTTTTTTTTGTAGTTAGGTGCAGATGCCCTTTTTGCTTGTCATGTGGATTAATGACCATATTTAGAGGTACTCTTCTTTGGTATTGGGGTTGCAATGATATGTCTTGTGCAAATACACTATTGGGGACTTAATCATGTTTTGTGGAGAATGTGAGTGAGCAAATTTGCCTTGGAACATTCTTTTTGAGATTTTTGGTGTGTGTTTGACTTGAATAGATTATGCCACTTGACATAGACAGAGGTTTACTTCCAGTCACTATATTGGGACAACAAACAAGGGATGAGCCCTTTTGGTGTGCAACATTCTTTTTTGTTATTTTATTGAAATTTTGGCTCGAGAAAAACGAAAGTCCTGTGGTAGATATGGTCTATAGCTAGGCTTAATTTTGGCTTGTATTTAAGGCATATCTTTGTCTTGTATTCTTAACAAACAGAGCCCTTTTCGTAATCTCATATTTTAGTTGTCAGAATAATGTGTATTGCAATGTTTGTGAGGAGAATCAGTTGGATCTCTTCTTTACTTGTTCTTTTGCTGTCTTTTGCTAGTGCAATCTTTCCAACATCTTTAATGTTGGTTGGTGCTTCGCAAATAATGCCTGGGATGCTTCCTTCTAACTCATCTTTTTATAGGAATAAAAACAATTTCATTGGTTGCTGAAATATATTGCAAAAGGAAATCCTCTCAGAGAATAATTAATGAGAAATGAGTACAGATAAACTACAGTTACAAAATTGAGGAGATGATCTTCAAGATAAAGCTAGAAAAGAAAAATTAATAAAAATATTGATGTTATGGTGTTTATCTGAGAAGATTCCAGCATTTATTTTCTTTTTTTACCAAAGGTTAATGAAGTTGCTCCACAAAATCTTTTGCCTTTCTTGAACGGATGTCCGCTGAGAGATAGATGGAGGAGAGTGAAGATATCCCATGGTCTTGTAATAGTCCAGCCAAAAGATTATTGTAGATAAGTCAGCAAACGGGCAGTTGCTGAACAAATGAATTTGAGACTCAGGTTCTTTAAGAAAAAGCGACAGCAACTTGGTGAGATAGCTAACCAAGGAGATCTTAGTTGGAGCATATCATAAGTATGAATTCAAGCGTGGTTAATCTTCCAAGGAAAAAACTATACATTTTTGAGGCAATGACACTTCCCAATCTGTTGATAAAAAAAAATATTCGTAAGGTTTCTAGCAGATGCCAGCTTCTTCGTCAATGAGCTGGAAAAAAAGAGACCATACTTCTTCGAAGTCGTACGTCAAATGCCCTCTTGATTCGATGAAGCAAAGCTCACAACTGAAATGAAAGCTTGGCCCATTCCCCTTCCAACTCATTTAAGGAATTCACTTCAGTGGTTAAGTGAAGACTTTTT

Coding sequence (CDS)

ATGGAGTGGAACACGATTCACCATCTGGATCTACGACATGTAGGAAGAGGTCTCAAACCATTGCAACCTCATGCTGCCGCATTTCATTCCCATCAGGCACTCGTTGCCGTCGCCATTGGGACTTACATCGTTGAATGTGATGCATTAACTGGTTGCAAGATCTCTTCCATTAACATTGGTGCTCGAGTTGTTCGCATGTCTTATAGCCCCACAAGTGGGCATGCCGTGATTGCAATGCTCGAGGTTGGTCCATTATATATGATATTTTTCAACACTCGAGTTTTTTATTTTTCCTTTTTTCCCAAATATTATATTTTTTCAAGAAACCAAATTTTATTGAGAAAAATAAAAGAATAG

Protein sequence

MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSINIGARVVRMSYSPTSGHAVIAMLEVGPLYMIFFNTRVFYFSFFPKYYIFSRNQILLRKIKE

Homology

[Close]

BLAST of Cp4.1LG16g01160 vs. NCBI nr
Match: KAG6617965.1 (hypothetical protein I3842_Q139200 [Carya illinoinensis])

HSP 1 Score: 150 bits (380), Expect = 8.73e-45
Identity = 73/91 (80.22%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 1  MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSINIG 60
          MEW T+HHLDLRHVGRGLKPLQPHAA+FH HQALVAVAIG +I+E DALTG  ISSI+IG
Sbjct: 1  MEWTTVHHLDLRHVGRGLKPLQPHAASFHPHQALVAVAIGNFIIEFDALTGSMISSIDIG 60

Query: 61 ARVVRMSYSPTSGHAVIAMLEVGPLYMIFFN 91
          A VVRMSYSPTSGHAVIA+LEVGP Y++ F 
Sbjct: 61 APVVRMSYSPTSGHAVIAILEVGPKYILLFR 91

[Close]

BLAST of Cp4.1LG16g01160 vs. NCBI nr
Match: XP_022973179.1 (uncharacterized protein LOC111471690 isoform X1 [Cucurbita maxima] >XP_022973180.1 uncharacterized protein LOC111471690 isoform X1 [Cucurbita maxima] >XP_022973181.1 uncharacterized protein LOC111471690 isoform X1 [Cucurbita maxima] >XP_022973182.1 uncharacterized protein LOC111471690 isoform X1 [Cucurbita maxima] >XP_022973183.1 uncharacterized protein LOC111471690 isoform X1 [Cucurbita maxima])

HSP 1 Score: 163 bits (413), Expect = 6.99e-44
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSINIG 60
          MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSI+IG
Sbjct: 1  MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSIDIG 60

Query: 61 ARVVRMSYSPTSGHAVIAMLE 81
          ARVVRMSYSPTSGHAVIAMLE
Sbjct: 61 ARVVRMSYSPTSGHAVIAMLE 81

[Close]

BLAST of Cp4.1LG16g01160 vs. NCBI nr
Match: XP_022932300.1 (uncharacterized protein LOC111438661 isoform X1 [Cucurbita moschata] >XP_022932301.1 uncharacterized protein LOC111438661 isoform X1 [Cucurbita moschata] >XP_022932302.1 uncharacterized protein LOC111438661 isoform X1 [Cucurbita moschata] >XP_022932303.1 uncharacterized protein LOC111438661 isoform X1 [Cucurbita moschata] >XP_022932304.1 uncharacterized protein LOC111438661 isoform X1 [Cucurbita moschata])

HSP 1 Score: 163 bits (413), Expect = 6.99e-44
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSINIG 60
          MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSI+IG
Sbjct: 1  MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSIDIG 60

Query: 61 ARVVRMSYSPTSGHAVIAMLE 81
          ARVVRMSYSPTSGHAVIAMLE
Sbjct: 61 ARVVRMSYSPTSGHAVIAMLE 81

[Close]

BLAST of Cp4.1LG16g01160 vs. NCBI nr
Match: KAA0045809.1 (Transducin/WD40 repeat-like superfamily protein isoform 2 [Cucumis melo var. makuwa] >TYJ99473.1 Transducin/WD40 repeat-like superfamily protein isoform 2 [Cucumis melo var. makuwa])

HSP 1 Score: 162 bits (411), Expect = 1.30e-43
Identity = 79/81 (97.53%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSINIG 60
          MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISS++IG
Sbjct: 1  MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSLDIG 60

Query: 61 ARVVRMSYSPTSGHAVIAMLE 81
          ARVVRMSYSPTSGHAVIAMLE
Sbjct: 61 ARVVRMSYSPTSGHAVIAMLE 81

[Close]

BLAST of Cp4.1LG16g01160 vs. NCBI nr
Match: XP_011649345.2 (uncharacterized protein LOC101204486 [Cucumis sativus] >KAE8651919.1 hypothetical protein Csa_005960 [Cucumis sativus])

HSP 1 Score: 162 bits (411), Expect = 1.30e-43
Identity = 79/81 (97.53%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSINIG 60
          MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISS++IG
Sbjct: 1  MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSLDIG 60

Query: 61 ARVVRMSYSPTSGHAVIAMLE 81
          ARVVRMSYSPTSGHAVIAMLE
Sbjct: 61 ARVVRMSYSPTSGHAVIAMLE 81

[Close]

BLAST of Cp4.1LG16g01160 vs. ExPASy TrEMBL
Match: A0A6J1I6U6 (uncharacterized protein LOC111471690 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471690 PE=4 SV=1)

HSP 1 Score: 163 bits (413), Expect = 3.38e-44
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSINIG 60
          MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSI+IG
Sbjct: 1  MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSIDIG 60

Query: 61 ARVVRMSYSPTSGHAVIAMLE 81
          ARVVRMSYSPTSGHAVIAMLE
Sbjct: 61 ARVVRMSYSPTSGHAVIAMLE 81

[Close]

BLAST of Cp4.1LG16g01160 vs. ExPASy TrEMBL
Match: A0A6J1EW99 (uncharacterized protein LOC111438661 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438661 PE=4 SV=1)

HSP 1 Score: 163 bits (413), Expect = 3.38e-44
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSINIG 60
          MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSI+IG
Sbjct: 1  MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSIDIG 60

Query: 61 ARVVRMSYSPTSGHAVIAMLE 81
          ARVVRMSYSPTSGHAVIAMLE
Sbjct: 61 ARVVRMSYSPTSGHAVIAMLE 81

[Close]

BLAST of Cp4.1LG16g01160 vs. ExPASy TrEMBL
Match: A0A5D3BJK1 (Transducin/WD40 repeat-like superfamily protein isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00380 PE=4 SV=1)

HSP 1 Score: 162 bits (411), Expect = 6.29e-44
Identity = 79/81 (97.53%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSINIG 60
          MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISS++IG
Sbjct: 1  MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSLDIG 60

Query: 61 ARVVRMSYSPTSGHAVIAMLE 81
          ARVVRMSYSPTSGHAVIAMLE
Sbjct: 61 ARVVRMSYSPTSGHAVIAMLE 81

[Close]

BLAST of Cp4.1LG16g01160 vs. ExPASy TrEMBL
Match: A0A0A0LLY5 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G285390 PE=4 SV=1)

HSP 1 Score: 162 bits (411), Expect = 6.29e-44
Identity = 79/81 (97.53%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSINIG 60
          MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISS++IG
Sbjct: 1  MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSLDIG 60

Query: 61 ARVVRMSYSPTSGHAVIAMLE 81
          ARVVRMSYSPTSGHAVIAMLE
Sbjct: 61 ARVVRMSYSPTSGHAVIAMLE 81

[Close]

BLAST of Cp4.1LG16g01160 vs. ExPASy TrEMBL
Match: A0A1S4E1R7 (uncharacterized protein LOC103497411 OS=Cucumis melo OX=3656 GN=LOC103497411 PE=4 SV=1)

HSP 1 Score: 162 bits (411), Expect = 6.29e-44
Identity = 79/81 (97.53%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSINIG 60
          MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISS++IG
Sbjct: 1  MEWNTIHHLDLRHVGRGLKPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSLDIG 60

Query: 61 ARVVRMSYSPTSGHAVIAMLE 81
          ARVVRMSYSPTSGHAVIAMLE
Sbjct: 61 ARVVRMSYSPTSGHAVIAMLE 81

[Close]

BLAST of Cp4.1LG16g01160 vs. TAIR 10
Match: AT3G50590.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.1e-27
Identity = 57/82 (69.51%), Postives = 71/82 (86.59%), Query Frame = 0


Query: 1  MEWNTIHHLDLRHVGRGL-KPLQPHAAAFHSHQALVAVAIGTYIVECDALTGCKISSINI 60
          MEW T+ HLDLRHVGRG+ KPLQPH AAFH  QA++AVA+G++I+E DALTGCKI+SI+I
Sbjct: 1  MEWATVQHLDLRHVGRGVSKPLQPHTAAFHPSQAVIAVAVGSHIMEFDALTGCKIASIDI 60

Query: 61 GARVVRMSYSPTSGHAVIAMLE 82
          G+  VRM YSPTS +AV+A+LE
Sbjct: 61 GSPAVRMLYSPTSSNAVVAILE 82

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g01160 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG16g01160 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6617965.1	8.73e-45	80.22	hypothetical protein I3842_Q139200 [Carya illinoinensis]	[more]
XP_022973179.1	6.99e-44	98.77	uncharacterized protein LOC111471690 isoform X1 [Cucurbita maxima] >XP_022973180...	[more]
XP_022932300.1	6.99e-44	98.77	uncharacterized protein LOC111438661 isoform X1 [Cucurbita moschata] >XP_0229323...	[more]
KAA0045809.1	1.30e-43	97.53	Transducin/WD40 repeat-like superfamily protein isoform 2 [Cucumis melo var. mak...	[more]
XP_011649345.2	1.30e-43	97.53	uncharacterized protein LOC101204486 [Cucumis sativus] >KAE8651919.1 hypothetica...	[more]

BLAST of Cp4.1LG16g01160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I6U6	3.38e-44	98.77	uncharacterized protein LOC111471690 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EW99	3.38e-44	98.77	uncharacterized protein LOC111438661 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5D3BJK1	6.29e-44	97.53	Transducin/WD40 repeat-like superfamily protein isoform 2 OS=Cucumis melo var. m...	[more]
A0A0A0LLY5	6.29e-44	97.53	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G...	[more]
A0A1S4E1R7	6.29e-44	97.53	uncharacterized protein LOC103497411 OS=Cucumis melo OX=3656 GN=LOC103497411 PE=...	[more]

BLAST of Cp4.1LG16g01160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50590.1	1.1e-27	69.51	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR19878	AUTOPHAGY PROTEIN 16-LIKE	coord: 1..82
None	No IPR available	PANTHER	PTHR19878:SF17	TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN	coord: 1..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g01160.1	Cp4.1LG16g01160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000045	autophagosome assembly
biological_process	GO:0009555	pollen development
cellular_component	GO:0000421	autophagosome membrane