Cp4.1LG16g01040 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g01040
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	acyl-coenzyme A thioesterase 13
Location	Cp4.1LG16: 1942663 .. 1945578 (+)
RNA-Seq Expression	Cp4.1LG16g01040
Synteny	Cp4.1LG16g01040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTCTCGGAGTGGATGAACCAGTTTTGGGAAATTTCGGAAATGAGATAATCTTACAGAGTGAGCGATGGAGAAGACGAAGAGATACCTGGAGAAGCATGATGATGATCGGAAGCTTGCGTCCACCATTGATGCCCTTCCTTTCAGGTTTTACGAAAACTTTGTGATGACTGATCTTCGCGTTGATCTCATCGAACCTGGTCGGATCGTTTGCTCTCTCAAAGTCCCCGCTCGTTTGCTCGTATGCTTTTCTTCTTCTTCTTCTTCTTTGTTCATCTGCATGATTCACTTGATAATTAGATTTGTACATGATCTTTTGCCTATTTCTCACCTCAATTCGGATTTCTCTGTTTGCTGCTTGATGTTTCGTTATTAAGAACGAGAATAATTCCTTGCACGGAGGAGCCTCGGCGTCACTCGTCGACTGTATTGGTTCTGTAGCGTTAAAGACTTTGGGCGCTAACACCACTGGAGTCTCCCTTGAAATTAACCTCTCCTATCTGGATGCTGCTTATCTCGACGTGAGTTCCACTTTCCACTTTTTCTACCTTTCACTTTTCCGTTACTGTTGATCACATTACTCGGTCTCTATAATTTTTATTTTAACCTAATAGCAGATACGGAATTTGAAATTTCTGGTCCAATTACTGTGAATCTGAATTTCAACTCTTAGTAAGAAGCTTAATGTTCAGATTCCTACCCGATGATATATTGCACAATACACATTTTTTCCAGTGATGTAAATAGTGCAAGGATCCCCTCTGCCCTCACTGCCACTGGGAAAAGGGAAAAGAATAGACTAGGTTTTTCTCGTAGAGAGCAATTCATGGGCAAATAGTTGAAGAATCTGAGTATTAAGGGTATGAAGATTGGATTAAGTGACTTGGAAACACAGAACACAAGACGTGAGGAATTACACGAAAGGAATGTGTGGATTCAGTTTCCCAAGACACAAACGCAAGTGAACAGAAATATATTTGTATATTTTGATATTACTTTTAATTATTGTCGGATTAAGAACTTCAAGCTATTAGAATAAGCTCTCAAGCTATGAAGACAAATAATTCTTCCACTACCGCTGTTAGCAGAGTTGTCTGAAGTTCTTAGAGCTAGGAATACCTTTATTATGACAGGTAAAGACTTCCTTAGATTTTTTAAGAATCATGTTCTTGGATTTTTGATCTGCTACACATAGCTAATCCTGGGCAGATGGTGATTCTAGGTGAGTTTTTGGAGAAAAGGAGATGATTTTTTATAGAATTTTAACCAGAAGGTAAAGTTGGAGGATGACTGTGATGTCCACGTTGGTTGGGGAGGATAACAAACCTCCCACATTGGTTGGGGAGGATAACAAACCTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGTCTTGAGGGGAACCTCGAAAGGGAAAGCCCAAAGACATTACAAATGGTATCAGAGCCAGACATCGGACAATATGTCAGCCTTCTCGCTGTTCCCCGAACGGGGGTAGACACGAGATGGTGTGCTAGTAAGGACGCTGGGTGCCAAAGGAGGGTGTATTTGGGGGCGGTCCTACATCTATTGGAGGAAGGAAAGAGTGCCAGCGAAGACGCTGGGCCTCGATGGGGGGTGGATTGTGATGTCCACGTTGGTTGGGGGGGAGAACAAACCTCCATTTATAAGGGTGTGTAGAAACCTTCCCTTAGCAGACACGTTTTAAAGCCTTGAGGAGAAGCCCGAAAGAGAAAGCTCAAAGAGGACAATATTGGTAAGCCAGTGGATCTGGGGCGTTAGAATGGCTAATTAAGTCATTCTATCATATATTAGAAGGCACTATACTGACTGGATTTGTTGTTTTTCCTGTGTTGGCCAACCATATTTTTGCATGTCTCGATTTTGGTGCTTTCATTTGTTTAATAAACGCTTATTTCTTTGTGTACAAATGGAAATTTTAAGCTTTCATAATCATTTGAGTTTTTGAAATTGTGCTTTTCTTTTCTCAATTTCTTTAGAAAAGATTTGAATTCTAATCTACAAATATAAAAAATATAGACAATTTTCACAACATTTTTCTATATCTTCCTTAAATACAAATTGAGATGTCTTAGTTTATATTAGTAGATAATGAAATAAAAAAGACTCAGCCGAAAAAAATAGTGTTAATAAAACTAATACATAAACGCCTTTAGCGGGCACATCCACCGTCATCAAAATGTGTTATGCAAGACTTCGTTGCTTTAATAATTCTTATAATCTGTTTTCGTCTACTGTTTTAGGAGGAAATCGAGATCGACGCGAAGGTTTTGCGATTGGGCAAGACCATTGCAGTAATTAATGTTGAATTGAGGAGAAAAGGGAATGGTAAAATTATTGCTCAGGGTCGCCACACCAAGTACCTTGCCATCTCAAGCAAATTGTAGTTATAAACTCGTTTCAACATTAGAGTACCTCCAACAATTCCTCTGCTTCATGAACTGACATGGCATCTTACGTTCTATACCTTCATCTGAAAGAACTGTAACGACAATAACCTTTTCCAAGACTTTGTTGCTGATATAATTCTTATAATCTGTTGCTATTGCTGAAATATAATTTCATCTGATGCCTTCTTTTTAAATATCTGTTCCTCAAATGAGAATCGCAACAGTAAGGACGTTTAGTTTCGTTTTTGTTTTATCGAAACGTTCATGGAACTAAAATAGGATTCATACAGGTAATATGTAAGCATCTTAGGTAGGATTATCGATAGATTGGTTGTTGGCACTTGTTGACAGGCCGAGAGCTTCTCCTAAATTCATCGGTCCTCTCATCGTCCTCCTTCCAACTCCTCCGTTGCCTTTTCTCATCATTGCTGCAAATTCGCCATAGTCTATACGCCCGTCCT

mRNA sequence

CATTCTCGGAGTGGATGAACCAGTTTTGGGAAATTTCGGAAATGAGATAATCTTACAGAGTGAGCGATGGAGAAGACGAAGAGATACCTGGAGAAGCATGATGATGATCGGAAGCTTGCGTCCACCATTGATGCCCTTCCTTTCAGGTTTTACGAAAACTTTGTGATGACTGATCTTCGCGTTGATCTCATCGAACCTGGTCGGATCGTTTGCTCTCTCAAAGTCCCCGCTCGTTTGCTCAACGAGAATAATTCCTTGCACGGAGGAGCCTCGGCGTCACTCGTCGACTGTATTGGTTCTGTAGCGTTAAAGACTTTGGGCGCTAACACCACTGGAGTCTCCCTTGAAATTAACCTCTCCTATCTGGATGCTGCTTATCTCGACGAGGAAATCGAGATCGACGCGAAGGTTTTGCGATTGGGCAAGACCATTGCAGTAATTAATGTTGAATTGAGGAGAAAAGGGAATGGTAAAATTATTGCTCAGGGTCGCCACACCAAGTACCTTGCCATCTCAAGCAAATTGTAGTTATAAACTCGTTTCAACATTAGAGTACCTCCAACAATTCCTCTGCTTCATGAACTGACATGGCATCTTACGTTCTATACCTTCATCTGAAAGAACTGTAACGACAATAACCTTTTCCAAGACTTTGTTGCTGATATAATTCTTATAATCTGTTGCTATTGCTGAAATATAATTTCATCTGATGCCTTCTTTTTAAATATCTGTTCCTCAAATGAGAATCGCAACAGTAAGGACGTTTAGTTTCGTTTTTGTTTTATCGAAACGTTCATGGAACTAAAATAGGATTCATACAGGTAATATGTAAGCATCTTAGGTAGGATTATCGATAGATTGGTTGTTGGCACTTGTTGACAGGCCGAGAGCTTCTCCTAAATTCATCGGTCCTCTCATCGTCCTCCTTCCAACTCCTCCGTTGCCTTTTCTCATCATTGCTGCAAATTCGCCATAGTCTATACGCCCGTCCT

Coding sequence (CDS)

ATGGAGAAGACGAAGAGATACCTGGAGAAGCATGATGATGATCGGAAGCTTGCGTCCACCATTGATGCCCTTCCTTTCAGGTTTTACGAAAACTTTGTGATGACTGATCTTCGCGTTGATCTCATCGAACCTGGTCGGATCGTTTGCTCTCTCAAAGTCCCCGCTCGTTTGCTCAACGAGAATAATTCCTTGCACGGAGGAGCCTCGGCGTCACTCGTCGACTGTATTGGTTCTGTAGCGTTAAAGACTTTGGGCGCTAACACCACTGGAGTCTCCCTTGAAATTAACCTCTCCTATCTGGATGCTGCTTATCTCGACGAGGAAATCGAGATCGACGCGAAGGTTTTGCGATTGGGCAAGACCATTGCAGTAATTAATGTTGAATTGAGGAGAAAAGGGAATGGTAAAATTATTGCTCAGGGTCGCCACACCAAGTACCTTGCCATCTCAAGCAAATTGTAG

Protein sequence

MEKTKRYLEKHDDDRKLASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

Homology

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BLAST of Cp4.1LG16g01040 vs. ExPASy Swiss-Prot
Match: Q9NPJ3 (Acyl-coenzyme A thioesterase 13 OS=Homo sapiens OX=9606 GN=ACOT13 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-19
Identity = 48/104 (46.15%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 44  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAA 103
           PG+++C +KV     N   +LHGG +A+LVD I ++AL        GVS+++N++Y+  A
Sbjct: 35  PGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPA 94

Query: 104 YLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYL 148
            L E+I I A VL+ GKT+A  +V+L  K  GK+IAQGRHTK+L
Sbjct: 95  KLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138

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BLAST of Cp4.1LG16g01040 vs. ExPASy Swiss-Prot
Match: Q5R833 (Acyl-coenzyme A thioesterase 13 OS=Pongo abelii OX=9601 GN=ACOT13 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-19
Identity = 48/104 (46.15%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 44  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAA 103
           PG+++C +KV     N   +LHGG +A+LVD I ++AL        GVS+++N++Y+  A
Sbjct: 35  PGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPA 94

Query: 104 YLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYL 148
            L E+I I A VL+ GKT+A  +V+L  K  GK+IAQGRHTK+L
Sbjct: 95  KLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138

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BLAST of Cp4.1LG16g01040 vs. ExPASy Swiss-Prot
Match: Q9CQR4 (Acyl-coenzyme A thioesterase 13 OS=Mus musculus OX=10090 GN=Acot13 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 5.5e-19
Identity = 46/104 (44.23%), Postives = 71/104 (68.27%), Query Frame = 0


Query: 44  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAA 103
           P +++C +KV  +  N+  +LHGG +A+LVD I ++AL        GVS+++N++Y+  A
Sbjct: 35  PEKLICEMKVEEQHTNKLGTLHGGLTATLVDSISTMALMCTERGAPGVSVDMNITYMSPA 94

Query: 104 YLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYL 148
            + EEI I A +L+ GKT+A  +V+L  K  GK+IAQGRHTK+L
Sbjct: 95  KIGEEIVITAHILKQGKTLAFASVDLTNKTTGKLIAQGRHTKHL 138

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BLAST of Cp4.1LG16g01040 vs. ExPASy Swiss-Prot
Match: P87304 (Putative esterase C31F10.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC31F10.02 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.6e-13
Identity = 44/120 (36.67%), Postives = 72/120 (60.00%), Query Frame = 0


Query: 29  YENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANT 88
           ++  V++D+++    PG + CSLK+    LN   +LHGG  A+L D  GS+AL + G   
Sbjct: 27  FDAHVVSDIQIISAVPGFVECSLKLQKHHLNRMGNLHGGCIAALTDLGGSLALASRGLFI 86

Query: 89  TGVSLEINLSYLDA-AYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYL 148
           +GVS+++N ++L +   L   I + AK  RLG  IA  +V+     N ++ A+GRHTK++
Sbjct: 87  SGVSIDMNQTFLQSGGTLGSSILLHAKCDRLGSNIAFTSVDFLTSSN-EVFAKGRHTKFV 145

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BLAST of Cp4.1LG16g01040 vs. ExPASy Swiss-Prot
Match: P34419 (Putative esterase F42H10.6 OS=Caenorhabditis elegans OX=6239 GN=F42H10.6 PE=1 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 6.5e-12
Identity = 40/114 (35.09%), Postives = 67/114 (58.77%), Query Frame = 0


Query: 31  NFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTG 90
           N V  D+    +   ++VC + V  + LN   +LHGG +A+L D I + A+     +   
Sbjct: 38  NRVAEDVYPVEVTKSKLVCEMVVQHQHLNSKGTLHGGQTATLTDVITARAVGVTVKDKGM 97

Query: 91  VSLEINLSYLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHT 145
            S+E+ +SYL    + + +EI A VL++G+T+A  + E RRK +GK+ A+G+HT
Sbjct: 98  ASVELAVSYLLPVKVGDVLEITAHVLKVGRTMAFTDCEFRRKSDGKMSAKGKHT 151

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BLAST of Cp4.1LG16g01040 vs. NCBI nr
Match: XP_023512633.1 (acyl-coenzyme A thioesterase 13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298 bits (763), Expect = 9.37e-102
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MEKTKRYLEKHDDDRKLASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNE 60
           MEKTKRYLEKHDDDRKLASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNE
Sbjct: 1   MEKTKRYLEKHDDDRKLASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNE 60

Query: 61  NNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRLGK 120
           NNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRLGK
Sbjct: 61  NNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRLGK 120

Query: 121 TIAVINVELRRKGNGKIIAQGRHTKYLAISSKL 153
           TIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
Sbjct: 121 TIAVINVELRRKGNGKIIAQGRHTKYLAISSKL 153

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BLAST of Cp4.1LG16g01040 vs. NCBI nr
Match: KAG6571321.1 (Acyl-coenzyme A thioesterase 13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011097.1 Acyl-coenzyme A thioesterase 13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 292 bits (747), Expect = 2.76e-99
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MEKTKRYLEKHDDD--RKLASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLL 60
           MEKTKRYLEKHDDD  RK+ASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLL
Sbjct: 1   MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLL 60

Query: 61  NENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRL 120
           NENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRL
Sbjct: 61  NENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRL 120

Query: 121 GKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL 153
           GKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
Sbjct: 121 GKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL 155

[Close]

BLAST of Cp4.1LG16g01040 vs. NCBI nr
Match: XP_022973825.1 (acyl-coenzyme A thioesterase 13 [Cucurbita maxima])

HSP 1 Score: 289 bits (740), Expect = 3.23e-98
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MEKTKRYLEKHDDD--RKLASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLL 60
           MEKTKRYLEKHDDD  RK+ASTIDALPFRFYENFVMTD+RVDLIEPGRIVCSLKVPARLL
Sbjct: 1   MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDIRVDLIEPGRIVCSLKVPARLL 60

Query: 61  NENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRL 120
           NENNSLHGGASASLVDCIGSVAL TLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRL
Sbjct: 61  NENNSLHGGASASLVDCIGSVALNTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRL 120

Query: 121 GKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL 153
           GKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
Sbjct: 121 GKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL 155

[Close]

BLAST of Cp4.1LG16g01040 vs. NCBI nr
Match: XP_022931994.1 (acyl-coenzyme A thioesterase 13 [Cucurbita moschata])

HSP 1 Score: 286 bits (732), Expect = 5.36e-97
Identity = 149/155 (96.13%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MEKTKRYLEKHDDD--RKLASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLL 60
           MEKTKRYLEKHDDD  RK+AS+IDALP RFYENFVMTDLRVDLIEPGRIVCSLKVPARLL
Sbjct: 1   MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLL 60

Query: 61  NENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRL 120
           NENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDA+VLRL
Sbjct: 61  NENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDARVLRL 120

Query: 121 GKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL 153
           GKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
Sbjct: 121 GKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL 155

[Close]

BLAST of Cp4.1LG16g01040 vs. NCBI nr
Match: XP_038901620.1 (acyl-coenzyme A thioesterase 13 [Benincasa hispida])

HSP 1 Score: 275 bits (702), Expect = 1.94e-92
Identity = 141/154 (91.56%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MEKTKRYLEKH-DDDRKLASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLN 60
           MEK KRYLEKH DDDR +AS IDALPFRFYENF+MT LRVDLI+PGRIVCSLKVPARLLN
Sbjct: 1   MEKAKRYLEKHGDDDRAVASAIDALPFRFYENFIMTGLRVDLIQPGRIVCSLKVPARLLN 60

Query: 61  ENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRLG 120
            NNSLHGGASASLVDCIGS ALKTLGANTTGVSLEINLSYLDAAYLDEEIEID+KVLR+G
Sbjct: 61  ANNSLHGGASASLVDCIGSAALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDSKVLRMG 120

Query: 121 KTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL 153
           KTIAVINVELRRKGNGKIIAQGRHTKYLA SSKL
Sbjct: 121 KTIAVINVELRRKGNGKIIAQGRHTKYLAFSSKL 154

[Close]

BLAST of Cp4.1LG16g01040 vs. ExPASy TrEMBL
Match: A0A6J1ICC5 (acyl-coenzyme A thioesterase 13 OS=Cucurbita maxima OX=3661 GN=LOC111472373 PE=3 SV=1)

HSP 1 Score: 289 bits (740), Expect = 1.56e-98
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MEKTKRYLEKHDDD--RKLASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLL 60
           MEKTKRYLEKHDDD  RK+ASTIDALPFRFYENFVMTD+RVDLIEPGRIVCSLKVPARLL
Sbjct: 1   MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDIRVDLIEPGRIVCSLKVPARLL 60

Query: 61  NENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRL 120
           NENNSLHGGASASLVDCIGSVAL TLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRL
Sbjct: 61  NENNSLHGGASASLVDCIGSVALNTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRL 120

Query: 121 GKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL 153
           GKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
Sbjct: 121 GKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL 155

[Close]

BLAST of Cp4.1LG16g01040 vs. ExPASy TrEMBL
Match: A0A6J1EVT6 (acyl-coenzyme A thioesterase 13 OS=Cucurbita moschata OX=3662 GN=LOC111438326 PE=3 SV=1)

HSP 1 Score: 286 bits (732), Expect = 2.59e-97
Identity = 149/155 (96.13%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MEKTKRYLEKHDDD--RKLASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLL 60
           MEKTKRYLEKHDDD  RK+AS+IDALP RFYENFVMTDLRVDLIEPGRIVCSLKVPARLL
Sbjct: 1   MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLL 60

Query: 61  NENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRL 120
           NENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDA+VLRL
Sbjct: 61  NENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDARVLRL 120

Query: 121 GKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL 153
           GKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
Sbjct: 121 GKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL 155

[Close]

BLAST of Cp4.1LG16g01040 vs. ExPASy TrEMBL
Match: A0A1S3CCW9 (acyl-coenzyme A thioesterase 13 OS=Cucumis melo OX=3656 GN=LOC103499601 PE=3 SV=1)

HSP 1 Score: 261 bits (667), Expect = 1.78e-87
Identity = 135/153 (88.24%), Postives = 141/153 (92.16%), Query Frame = 0


Query: 1   MEKTKRYLEKHDDDRKLASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNE 60
           MEKTKRYLEK  DD   AS ID LPFRFYENF+MT +RVDLI+PGRI+CSLKVPARLLNE
Sbjct: 1   MEKTKRYLEKLGDD---ASAIDVLPFRFYENFIMTGIRVDLIQPGRILCSLKVPARLLNE 60

Query: 61  NNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRLGK 120
           NNSLHGGASASLVDCIGS ALKTLGA TTGVSLEINLSYLDAAYLDEEIEID+KVLR+GK
Sbjct: 61  NNSLHGGASASLVDCIGSAALKTLGATTTGVSLEINLSYLDAAYLDEEIEIDSKVLRMGK 120

Query: 121 TIAVINVELRRKGNGKIIAQGRHTKYLAISSKL 153
           TIAVINVELRRK NGKIIAQGRHTKYLA SSKL
Sbjct: 121 TIAVINVELRRKSNGKIIAQGRHTKYLAFSSKL 150

[Close]

BLAST of Cp4.1LG16g01040 vs. ExPASy TrEMBL
Match: A0A6J1E0I3 (acyl-coenzyme A thioesterase 13 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025285 PE=3 SV=1)

HSP 1 Score: 258 bits (658), Expect = 4.96e-86
Identity = 128/155 (82.58%), Postives = 143/155 (92.26%), Query Frame = 0


Query: 1   MEKTKRYLEKHDD--DRKLASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLL 60
           MEKTKRYLEKHDD  DR LAS ID LP RFYE FVMT LRVDLIEPGR+VCSLKVPARLL
Sbjct: 1   MEKTKRYLEKHDDGDDRNLASAIDDLPLRFYEQFVMTGLRVDLIEPGRVVCSLKVPARLL 60

Query: 61  NENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRL 120
           NENNSLHGGA+A+LVDCIGS A+KT G +TTGVS+EIN+SY+DAAYLDE+IEI++KVLR+
Sbjct: 61  NENNSLHGGATAALVDCIGSAAIKTFGVSTTGVSVEINVSYMDAAYLDEQIEIESKVLRM 120

Query: 121 GKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL 153
           GKTIAV+NVELR+K NGKI+AQGRHTKYLAISSKL
Sbjct: 121 GKTIAVVNVELRKKSNGKIVAQGRHTKYLAISSKL 155

[Close]

BLAST of Cp4.1LG16g01040 vs. ExPASy TrEMBL
Match: A0A6J1DWW4 (acyl-coenzyme A thioesterase 13 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111025285 PE=3 SV=1)

HSP 1 Score: 250 bits (638), Expect = 5.18e-83
Identity = 127/155 (81.94%), Postives = 141/155 (90.97%), Query Frame = 0


Query: 1   MEKTKRYLEKHDD--DRKLASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLL 60
           MEKTKRYLEKHDD  DR LAS ID LP RFYE FVMT LRVDLIEPGR+VCSLKVPARLL
Sbjct: 1   MEKTKRYLEKHDDGDDRNLASAIDDLPLRFYEQFVMTGLRVDLIEPGRVVCSLKVPARLL 60

Query: 61  NENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRL 120
           NENNSLHGGA+A+LVDCIGS A+KT G +TTGVS+EIN+SY+DAAYLD  IEI++KVLR+
Sbjct: 61  NENNSLHGGATAALVDCIGSAAIKTFGVSTTGVSVEINVSYMDAAYLD--IEIESKVLRM 120

Query: 121 GKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL 153
           GKTIAV+NVELR+K NGKI+AQGRHTKYLAISSKL
Sbjct: 121 GKTIAVVNVELRKKSNGKIVAQGRHTKYLAISSKL 153

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BLAST of Cp4.1LG16g01040 vs. TAIR 10
Match: AT1G04290.1 (Thioesterase superfamily protein )

HSP 1 Score: 184.9 bits (468), Expect = 4.9e-47
Identity = 92/153 (60.13%), Postives = 116/153 (75.82%), Query Frame = 0


Query: 1   MEKTKRYLEKHDDDRKLASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNE 60
           +E  K+YLE  +D++     +  LP RF E FV   L+VDLIEPGRIVCS+K+P  LLN 
Sbjct: 3   LESVKKYLEGDEDEKAKEPMVAKLPHRFLERFVTNGLKVDLIEPGRIVCSMKIPPHLLNA 62

Query: 61  NNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRLGK 120
              LHGGA+A+LVD IGS  + T GA+ +GVS+EIN+SYLDAA+LDEEIEI++K LR+GK
Sbjct: 63  GKFLHGGATATLVDLIGSAVIYTAGASHSGVSVEINVSYLDAAFLDEEIEIESKALRVGK 122

Query: 121 TIAVINVELRRKGNGKIIAQGRHTKYLAISSKL 154
            +AV++VELR+K  GKIIAQGRHTKY A  S L
Sbjct: 123 AVAVVSVELRKKTTGKIIAQGRHTKYFAPRSNL 155

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BLAST of Cp4.1LG16g01040 vs. TAIR 10
Match: AT2G29590.1 (Thioesterase superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 2.4e-17
Identity = 59/158 (37.34%), Postives = 89/158 (56.33%), Query Frame = 0


Query: 1   MEKTKRYLEKHD---DDRKLASTIDAL--PFRFYENFVMTDLRVDLIEPGRIVCSLKVPA 60
           MEK   YL+  D   DD +     + L     FYENF +  +RV+ +EPG I CS KVP 
Sbjct: 2   MEKIMEYLQLSDEVVDDGEAPRVEEFLGEGKSFYENFSLRGIRVNRVEPGFISCSFKVPL 61

Query: 61  RLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKV 120
           RL + + +L  GA A+LVD +G   +   G     VS+++++++L  A L EE+EI +++
Sbjct: 62  RLTDRDKNLANGAIANLVDEVGGALVHGEGL-PMSVSVDMSIAFLSKAKLGEELEITSRL 121

Query: 121 LRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL 154
           L          V +R K  G+IIA+GRH+ +   +SKL
Sbjct: 122 LGERGGYKGTIVVVRNKMTGEIIAEGRHSMFGRQASKL 158

[Close]

BLAST of Cp4.1LG16g01040 vs. TAIR 10
Match: AT1G52191.1 (Thioesterase superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.8e-09
Identity = 38/114 (33.33%), Postives = 68/114 (59.65%), Query Frame = 0


Query: 32  FVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGV 91
           F++  L+V  +  G + C L V   +LNE+ +LH  A   L++ +G++A+ + G + T  
Sbjct: 4   FILEGLQVIHVGRGIVRCKLTVTHHVLNEDGTLHTAAIGVLMELMGAIAIYSAGGSHT-- 63

Query: 92  SLEINLSYLDAAYLDEEIEIDAKVLRLGKTIAVIN---VELRRKGNGKIIAQGR 143
           S+++N S    A + EEI+I+A+V  +GK    +N   +E+RR+   ++IA GR
Sbjct: 64  SVDLNYSLYSTAKIQEEIKIEARV--VGKRSENLNSAIIEIRREYEEELIATGR 113

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g01040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9NPJ3	1.4e-19	46.15	Acyl-coenzyme A thioesterase 13 OS=Homo sapiens OX=9606 GN=ACOT13 PE=1 SV=1	[more]
Q5R833	1.4e-19	46.15	Acyl-coenzyme A thioesterase 13 OS=Pongo abelii OX=9601 GN=ACOT13 PE=2 SV=1	[more]
Q9CQR4	5.5e-19	44.23	Acyl-coenzyme A thioesterase 13 OS=Mus musculus OX=10090 GN=Acot13 PE=1 SV=1	[more]
P87304	2.6e-13	36.67	Putative esterase C31F10.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2484...	[more]
P34419	6.5e-12	35.09	Putative esterase F42H10.6 OS=Caenorhabditis elegans OX=6239 GN=F42H10.6 PE=1 SV...	[more]

BLAST of Cp4.1LG16g01040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512633.1	9.37e-102	100.00	acyl-coenzyme A thioesterase 13 [Cucurbita pepo subsp. pepo]	[more]
KAG6571321.1	2.76e-99	98.06	Acyl-coenzyme A thioesterase 13, partial [Cucurbita argyrosperma subsp. sororia]...	[more]
XP_022973825.1	3.23e-98	96.77	acyl-coenzyme A thioesterase 13 [Cucurbita maxima]	[more]
XP_022931994.1	5.36e-97	96.13	acyl-coenzyme A thioesterase 13 [Cucurbita moschata]	[more]
XP_038901620.1	1.94e-92	91.56	acyl-coenzyme A thioesterase 13 [Benincasa hispida]	[more]

BLAST of Cp4.1LG16g01040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ICC5	1.56e-98	96.77	acyl-coenzyme A thioesterase 13 OS=Cucurbita maxima OX=3661 GN=LOC111472373 PE=3...	[more]
A0A6J1EVT6	2.59e-97	96.13	acyl-coenzyme A thioesterase 13 OS=Cucurbita moschata OX=3662 GN=LOC111438326 PE...	[more]
A0A1S3CCW9	1.78e-87	88.24	acyl-coenzyme A thioesterase 13 OS=Cucumis melo OX=3656 GN=LOC103499601 PE=3 SV=...	[more]
A0A6J1E0I3	4.96e-86	82.58	acyl-coenzyme A thioesterase 13 isoform X1 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1DWW4	5.18e-83	81.94	acyl-coenzyme A thioesterase 13 isoform X2 OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of Cp4.1LG16g01040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04290.1	4.9e-47	60.13	Thioesterase superfamily protein	[more]
AT2G29590.1	2.4e-17	37.34	Thioesterase superfamily protein	[more]
AT1G52191.1	1.8e-09	33.33	Thioesterase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006683	Thioesterase domain	PFAM	PF03061	4HBT	coord: 62..136 e-value: 6.8E-16 score: 58.4
IPR003736	Phenylacetic acid degradation-related domain	TIGRFAM	TIGR00369	TIGR00369	coord: 37..145 e-value: 2.7E-16 score: 57.7
None	No IPR available	GENE3D	3.10.129.10	Hotdog Thioesterase	coord: 16..151 e-value: 2.2E-39 score: 136.6
None	No IPR available	PANTHER	PTHR21660:SF47	F19P19.27 PROTEIN	coord: 1..153
None	No IPR available	CDD	cd03443	PaaI_thioesterase	coord: 36..147 e-value: 8.36703E-29 score: 100.325
IPR039298	Acyl-coenzyme A thioesterase 13	PANTHER	PTHR21660	THIOESTERASE SUPERFAMILY MEMBER-RELATED	coord: 1..153
IPR029069	HotDog domain superfamily	SUPERFAMILY	54637	Thioesterase/thiol ester dehydrase-isomerase	coord: 24..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g01040.1	Cp4.1LG16g01040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031047	gene silencing by RNA
cellular_component	GO:0030014	CCR4-NOT complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0047617	acyl-CoA hydrolase activity