Cp4.1LG16g00700 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g00700
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RING-type E3 ubiquitin transferase
Location	Cp4.1LG16: 1484044 .. 1484691 (+)
RNA-Seq Expression	Cp4.1LG16g00700
Synteny	Cp4.1LG16g00700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGCTGTTTCCATTTCTTCACCTCATCAGCTCATTCACCATGGAGATCAAGTGTTCTATTATTCAAGAAAGCTCCTCCTTCACTCCTCCCTCCACGCGCTCACCTTCACCGCCGACGCTCCCTCCTCCGTCCTCCACCGCCCACTCGAATCCTACACCTTCGATACAAATGTCGTCATGGTCCTCTCCGTCCTCCTCTGCGCCTTAATTTGCTCATTAGGTCTCAACTCCATCATTAGATGTGCTTTGAAATGCTCTCGTTTTGTCGTCTCTGACGACCCTCACCCTTCCTCCACCACCTCCGCCCCCGTCGGAGTCCACAAGAAAGCTATCAAGAGCTTCACTATGGTTCAATTCTCCCCAGATCTCAACCTCCCCGGGCTCGACTCCGAGTGCGTTATTTGCTTGTCGGACTTCGTCGACGGCGAGAAGCTCCGGCTTCTCCCCAAGTGCAACCATGGCTTCCATGTTAAGTGTATTGATAAATGGTTGAGTTCTCACTCCTCTTGCCCTAAATGTCGCCAGTGTTTGGTCCAAACTTCTCAGAAAATCGCCGGGGTGAGCGGTCCGGCGTCTCCTCCTCCTCCGGCCATCAACTTAACGCCGCTAGATCCCGAAGCTCGGGTACGGAATTTATGGCTGTAA

mRNA sequence

ATGTCGGCTGTTTCCATTTCTTCACCTCATCAGCTCATTCACCATGGAGATCAAGTGTTCTATTATTCAAGAAAGCTCCTCCTTCACTCCTCCCTCCACGCGCTCACCTTCACCGCCGACGCTCCCTCCTCCGTCCTCCACCGCCCACTCGAATCCTACACCTTCGATACAAATGTCGTCATGGTCCTCTCCGTCCTCCTCTGCGCCTTAATTTGCTCATTAGGTCTCAACTCCATCATTAGATGTGCTTTGAAATGCTCTCGTTTTGTCGTCTCTGACGACCCTCACCCTTCCTCCACCACCTCCGCCCCCGTCGGAGTCCACAAGAAAGCTATCAAGAGCTTCACTATGGTTCAATTCTCCCCAGATCTCAACCTCCCCGGGCTCGACTCCGAGTGCGTTATTTGCTTGTCGGACTTCGTCGACGGCGAGAAGCTCCGGCTTCTCCCCAAGTGCAACCATGGCTTCCATGTTAAGTGTATTGATAAATGGTTGAGTTCTCACTCCTCTTGCCCTAAATGTCGCCAGTGTTTGGTCCAAACTTCTCAGAAAATCGCCGGGGTGAGCGGTCCGGCGTCTCCTCCTCCTCCGGCCATCAACTTAACGCCGCTAGATCCCGAAGCTCGGGTACGGAATTTATGGCTGTAA

Coding sequence (CDS)

ATGTCGGCTGTTTCCATTTCTTCACCTCATCAGCTCATTCACCATGGAGATCAAGTGTTCTATTATTCAAGAAAGCTCCTCCTTCACTCCTCCCTCCACGCGCTCACCTTCACCGCCGACGCTCCCTCCTCCGTCCTCCACCGCCCACTCGAATCCTACACCTTCGATACAAATGTCGTCATGGTCCTCTCCGTCCTCCTCTGCGCCTTAATTTGCTCATTAGGTCTCAACTCCATCATTAGATGTGCTTTGAAATGCTCTCGTTTTGTCGTCTCTGACGACCCTCACCCTTCCTCCACCACCTCCGCCCCCGTCGGAGTCCACAAGAAAGCTATCAAGAGCTTCACTATGGTTCAATTCTCCCCAGATCTCAACCTCCCCGGGCTCGACTCCGAGTGCGTTATTTGCTTGTCGGACTTCGTCGACGGCGAGAAGCTCCGGCTTCTCCCCAAGTGCAACCATGGCTTCCATGTTAAGTGTATTGATAAATGGTTGAGTTCTCACTCCTCTTGCCCTAAATGTCGCCAGTGTTTGGTCCAAACTTCTCAGAAAATCGCCGGGGTGAGCGGTCCGGCGTCTCCTCCTCCTCCGGCCATCAACTTAACGCCGCTAGATCCCGAAGCTCGGGTACGGAATTTATGGCTGTAA

Protein sequence

MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDPHPSSTTSAPVGVHKKAIKSFTMVQFSPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPAINLTPLDPEARVRNLWL

Homology

[Close]

BLAST of Cp4.1LG16g00700 vs. ExPASy Swiss-Prot
Match: Q6NQG7 (RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 7.7e-51
Identity = 112/200 (56.00%), Postives = 138/200 (69.00%), Query Frame = 0


Query: 22  YSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIR 81
           YSRKLL H+   + T    APS      +    FD NVVMVLSVLLCAL+CSLGLNSIIR
Sbjct: 26  YSRKLLFHTHDQSPT---PAPSPY----VGDNNFDANVVMVLSVLLCALVCSLGLNSIIR 85

Query: 82  CALKCSRFVVSD---DPHPSSTTSAPVGVHKKAIKSFTMVQFSPDLNLPGLDSECVICLS 141
           CAL+CS  V S+   D +P   T+   GV +KA+KSF  V +S +LNLPGLD+EC ICLS
Sbjct: 86  CALRCSNLVPSEAGGDNYPVRLTN--TGVKRKALKSFQTVSYSTELNLPGLDTECAICLS 145

Query: 142 DFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPAS----- 201
           +FV  E+++LLP C+HGFHV+CIDKWLSSHSSCP CR CL+QT +KIA  S  +S     
Sbjct: 146 EFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLIQTCEKIADCSQTSSLNSTQ 205

Query: 202 PPPPAI--NLTPLDPEARVR 212
           PP  +I   + PL+PE  +R
Sbjct: 206 PPQDSIILQIAPLEPERWIR 216

[Close]

BLAST of Cp4.1LG16g00700 vs. ExPASy Swiss-Prot
Match: P0C034 (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.3e-45
Identity = 111/217 (51.15%), Postives = 140/217 (64.52%), Query Frame = 0


Query: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTN 60
           MSA  + S  Q         + SRKLLLH+     T  A A   V   PL ++      N
Sbjct: 1   MSANELPSSAQAFQEQFLGGFVSRKLLLHNPFDHNTQRAFA---VAPSPLITHENNLSGN 60

Query: 61  VVMVLSVLLCALICSLGLNSIIRCALKCS-RFVVSDD-PHPSSTT-SAPVGVHKKAIKSF 120
           V+M+LS+L+C +IC LGL+ IIRCAL+ S RF++S+  P  SST  S+  G+ KKA++ F
Sbjct: 61  VMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSNKGIKKKALRMF 120

Query: 121 TMVQFSPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCR 180
            +V +SP++NLPGLD ECVICLSDFV GE+LRLLPKCNHGFHV+CIDKWL  H +CPKCR
Sbjct: 121 PVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCR 180

Query: 181 QCLVQTSQKIAG-----VSGPASPPPPAI-NLTPLDP 207
            CLV+T QKI G      S  A P    I  + PL+P
Sbjct: 181 NCLVETCQKILGDFSQADSVTAEPTEIVIVTIVPLEP 214

[Close]

BLAST of Cp4.1LG16g00700 vs. ExPASy Swiss-Prot
Match: Q6NML0 (E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana OX=3702 GN=ATL76 PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.3e-45
Identity = 105/221 (47.51%), Postives = 141/221 (63.80%), Query Frame = 0


Query: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSL--HALTFTADAPSSVLHRPLESYTFDTN 60
           MSA  + +  Q +       + +RKLLLH     ++L   A APS ++           N
Sbjct: 1   MSANELPASAQSLQEQFLGSFVTRKLLLHDPFDHNSLRVFAVAPSPLI---THENNLKGN 60

Query: 61  VVMVLSVLLCALICSLGLNSIIRCAL-KCSRFVVSDDPHPSST--TSAPVGVHKKAIKSF 120
           V+M+LSVL+C +IC LGL+ IIRCA  + SRF++S+     ST  +S+  G+ KKA++ F
Sbjct: 61  VLMLLSVLICGIICCLGLHYIIRCAFRRSSRFMISEPISSLSTPRSSSNKGIKKKALRMF 120

Query: 121 TMVQFSPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCR 180
            +V +S ++NLPG+  ECVICLSDFV GE+LRLLPKCNHGFHV+CIDKWL  H +CPKCR
Sbjct: 121 PVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCR 180

Query: 181 QCLVQTSQKIAG----VSGPASPPPPA--INLTPLDPEARV 211
            CLV+T QKI G        AS P  +  + + PL+PE RV
Sbjct: 181 HCLVETCQKILGDFSQADSMASTPTESVIVRIDPLEPEGRV 218

[Close]

BLAST of Cp4.1LG16g00700 vs. ExPASy Swiss-Prot
Match: Q94BY6 (RING-H2 finger protein ATL75 OS=Arabidopsis thaliana OX=3702 GN=ATL75 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.1e-44
Identity = 102/204 (50.00%), Postives = 135/204 (66.18%), Query Frame = 0


Query: 21  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTNVVMVLSVLLCALICSLGLNS 80
           + SRKLLLH+     T  A A   V   PL ++      NV+M+LSVL+C +IC LGL+ 
Sbjct: 22  FVSRKLLLHNPFDHNTQRAFA---VAPSPLITHENNLSGNVLMLLSVLICGIICCLGLHY 81

Query: 81  IIRCAL-KCSRFVVSDDPHPSSTT--SAPVGVHKKAIKSFTMVQFSPDLNLPGLDSECVI 140
           IIRCA  + S F++S+     ST   S+  G++KKA++ F +V +SP++NLPGL  ECVI
Sbjct: 82  IIRCAFRRTSSFMISEPIAGLSTPCGSSNKGINKKALRMFPVVSYSPEMNLPGLGEECVI 141

Query: 141 CLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPA--- 200
           CLSDFV GE++R+LPKC+HGFHV+CIDKWL  H +CPKCR CLV+T QKI G    A   
Sbjct: 142 CLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCLVETCQKILGDFSQADQV 201

Query: 201 SPPPPA---INLTPLDPEARVRNL 214
           +  P A   + + PL+PE RV  L
Sbjct: 202 AATPTASVIVRIAPLEPEGRVNIL 222

[Close]

BLAST of Cp4.1LG16g00700 vs. ExPASy Swiss-Prot
Match: Q9LS99 (RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.9e-43
Identity = 97/200 (48.50%), Postives = 127/200 (63.50%), Query Frame = 0


Query: 21  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSII 80
           + SRKL     L  + F  +A  +  H P +      NV+M+LS+LLC +ICSLGL+ II
Sbjct: 22  FVSRKL-----LQQIPFAHNAQQA--HVP-DKNNLSGNVLMLLSILLCGIICSLGLHYII 81

Query: 81  RCALKCSR-FVVSDD---PHPSSTTSAPVGVHKKAIKSFTMVQFSPDLNLPGLDSECVIC 140
           RCA   SR F++SD    P     +S   G+ KKA+K   +V +SP++NLPG+  ECVIC
Sbjct: 82  RCAFIRSRSFMISDPISIPSTPRDSSVNKGIKKKALKMLPVVNYSPEINLPGVGEECVIC 141

Query: 141 LSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPP 200
           LSDFV GE+LR+LPKCNHGFH++CIDKWL+ H +CPKCR CLV T QK+      A    
Sbjct: 142 LSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCRHCLVDTCQKVLSDCDAADQVA 201

Query: 201 PA------INLTPLDPEARV 211
                   I ++PL+PEARV
Sbjct: 202 ATATESIDIRISPLEPEARV 213

[Close]

BLAST of Cp4.1LG16g00700 vs. NCBI nr
Match: XP_023512393.1 (RING-H2 finger protein ATL78-like [Cucurbita pepo subsp. pepo] >XP_023522416.1 RING-H2 finger protein ATL78-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 438 bits (1126), Expect = 4.65e-155
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVV 60
           MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVV
Sbjct: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVV 60

Query: 61  MVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDPHPSSTTSAPVGVHKKAIKSFTMVQF 120
           MVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDPHPSSTTSAPVGVHKKAIKSFTMVQF
Sbjct: 61  MVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDPHPSSTTSAPVGVHKKAIKSFTMVQF 120

Query: 121 SPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQ 180
           SPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQ
Sbjct: 121 SPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQ 180

Query: 181 TSQKIAGVSGPASPPPPAINLTPLDPEARVRNLWL 215
           TSQKIAGVSGPASPPPPAINLTPLDPEARVRNLWL
Sbjct: 181 TSQKIAGVSGPASPPPPAINLTPLDPEARVRNLWL 215

[Close]

BLAST of Cp4.1LG16g00700 vs. NCBI nr
Match: KAG6571357.1 (RING-H2 finger protein ATL78, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011129.1 RING-H2 finger protein ATL78, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 427 bits (1098), Expect = 8.66e-151
Identity = 210/215 (97.67%), Postives = 212/215 (98.60%), Query Frame = 0


Query: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVV 60
           MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVV
Sbjct: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVV 60

Query: 61  MVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDPHPSSTTSAPVGVHKKAIKSFTMVQF 120
           MVLSVLLCALICSLGLNSIIRCALKCSRFVVSD+ HPSSTT+APVGVHKKAIKSFTMVQF
Sbjct: 61  MVLSVLLCALICSLGLNSIIRCALKCSRFVVSDETHPSSTTAAPVGVHKKAIKSFTMVQF 120

Query: 121 SPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQ 180
           S DLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQ
Sbjct: 121 SSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQ 180

Query: 181 TSQKIAGVSGPASPPPPAINLTPLDPEARVRNLWL 215
           TSQKIAGVSGPASPPPPAINL PLDPEARVRNLWL
Sbjct: 181 TSQKIAGVSGPASPPPPAINLAPLDPEARVRNLWL 215

[Close]

BLAST of Cp4.1LG16g00700 vs. NCBI nr
Match: XP_022927999.1 (RING-H2 finger protein ATL78-like [Cucurbita moschata])

HSP 1 Score: 426 bits (1094), Expect = 3.53e-150
Identity = 209/215 (97.21%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVV 60
           MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVV
Sbjct: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVV 60

Query: 61  MVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDPHPSSTTSAPVGVHKKAIKSFTMVQF 120
           MVLSVLLCALICSLGLNSIIRCALKCSRFVVSDD HPSSTT+APVGVHKKAIKSFTMVQF
Sbjct: 61  MVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDTHPSSTTAAPVGVHKKAIKSFTMVQF 120

Query: 121 SPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQ 180
           S DLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQ
Sbjct: 121 SSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQ 180

Query: 181 TSQKIAGVSGPASPPPPAINLTPLDPEARVRNLWL 215
           TSQKIAGV GP SPPPPAINL PLDPEARVRNLWL
Sbjct: 181 TSQKIAGVGGPTSPPPPAINLAPLDPEARVRNLWL 215

[Close]

BLAST of Cp4.1LG16g00700 vs. NCBI nr
Match: XP_022971702.1 (RING-H2 finger protein ATL78-like [Cucurbita maxima])

HSP 1 Score: 422 bits (1084), Expect = 1.18e-148
Identity = 205/215 (95.35%), Postives = 208/215 (96.74%), Query Frame = 0


Query: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVV 60
           MSA SISSPHQLIHHGDQVFYYSRKLLLHSSL  L+FTADAPSSVLHRPLESYTFDTNVV
Sbjct: 1   MSAASISSPHQLIHHGDQVFYYSRKLLLHSSLRTLSFTADAPSSVLHRPLESYTFDTNVV 60

Query: 61  MVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDPHPSSTTSAPVGVHKKAIKSFTMVQF 120
           MVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDPHPSS TSAP+GVHKKAIKSFTMVQF
Sbjct: 61  MVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDPHPSSNTSAPIGVHKKAIKSFTMVQF 120

Query: 121 SPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQ 180
           +PDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQ
Sbjct: 121 TPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQ 180

Query: 181 TSQKIAGVSGPASPPPPAINLTPLDPEARVRNLWL 215
           TSQKIAGV GP SPPPPAINL PLDPEARVRNLWL
Sbjct: 181 TSQKIAGVGGPTSPPPPAINLAPLDPEARVRNLWL 215

[Close]

BLAST of Cp4.1LG16g00700 vs. NCBI nr
Match: XP_038901957.1 (RING-H2 finger protein ATL78-like [Benincasa hispida])

HSP 1 Score: 302 bits (773), Expect = 3.28e-101
Identity = 167/226 (73.89%), Postives = 180/226 (79.65%), Query Frame = 0


Query: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY------- 60
           MSA SIS+ H       + F+YSRKLLLH SLH L+FTA APS+ LH   E Y       
Sbjct: 1   MSAASISTSHY------EEFHYSRKLLLHPSLHKLSFTAAAPST-LHDQSEFYSGSSSGD 60

Query: 61  -TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDPHPSSTTS-APVGVHKKA 120
            TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFV+SDD   SS+T+ A  GVHKKA
Sbjct: 61  TTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVISDDGRRSSSTAPASTGVHKKA 120

Query: 121 IKSFTMVQFSPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSC 180
           IKSFT+VQFSP+LNLPGLDSECVICLSDF  GEKLRLLPKCNHGFHVKCIDKWLSSHSSC
Sbjct: 121 IKSFTVVQFSPNLNLPGLDSECVICLSDFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSC 180

Query: 181 PKCRQCLVQTSQKIAGVS-GPASPPPPAI-NLTPLDPEARVRNLWL 215
           PKCRQCLV T QKIAGV+    SPPPPA+  + PLD EA VRNL L
Sbjct: 181 PKCRQCLVHTCQKIAGVATASGSPPPPAVVGIAPLDHEAPVRNLRL 219

[Close]

BLAST of Cp4.1LG16g00700 vs. ExPASy TrEMBL
Match: A0A6J1EJK6 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111434900 PE=3 SV=1)

HSP 1 Score: 426 bits (1094), Expect = 1.71e-150
Identity = 209/215 (97.21%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVV 60
           MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVV
Sbjct: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVV 60

Query: 61  MVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDPHPSSTTSAPVGVHKKAIKSFTMVQF 120
           MVLSVLLCALICSLGLNSIIRCALKCSRFVVSDD HPSSTT+APVGVHKKAIKSFTMVQF
Sbjct: 61  MVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDTHPSSTTAAPVGVHKKAIKSFTMVQF 120

Query: 121 SPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQ 180
           S DLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQ
Sbjct: 121 SSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQ 180

Query: 181 TSQKIAGVSGPASPPPPAINLTPLDPEARVRNLWL 215
           TSQKIAGV GP SPPPPAINL PLDPEARVRNLWL
Sbjct: 181 TSQKIAGVGGPTSPPPPAINLAPLDPEARVRNLWL 215

[Close]

BLAST of Cp4.1LG16g00700 vs. ExPASy TrEMBL
Match: A0A6J1I2P6 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111470371 PE=3 SV=1)

HSP 1 Score: 422 bits (1084), Expect = 5.72e-149
Identity = 205/215 (95.35%), Postives = 208/215 (96.74%), Query Frame = 0


Query: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVV 60
           MSA SISSPHQLIHHGDQVFYYSRKLLLHSSL  L+FTADAPSSVLHRPLESYTFDTNVV
Sbjct: 1   MSAASISSPHQLIHHGDQVFYYSRKLLLHSSLRTLSFTADAPSSVLHRPLESYTFDTNVV 60

Query: 61  MVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDPHPSSTTSAPVGVHKKAIKSFTMVQF 120
           MVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDPHPSS TSAP+GVHKKAIKSFTMVQF
Sbjct: 61  MVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDPHPSSNTSAPIGVHKKAIKSFTMVQF 120

Query: 121 SPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQ 180
           +PDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQ
Sbjct: 121 TPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQ 180

Query: 181 TSQKIAGVSGPASPPPPAINLTPLDPEARVRNLWL 215
           TSQKIAGV GP SPPPPAINL PLDPEARVRNLWL
Sbjct: 181 TSQKIAGVGGPTSPPPPAINLAPLDPEARVRNLWL 215

[Close]

BLAST of Cp4.1LG16g00700 vs. ExPASy TrEMBL
Match: A0A5A7TCX2 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00810 PE=3 SV=1)

HSP 1 Score: 296 bits (757), Expect = 6.30e-99
Identity = 167/239 (69.87%), Postives = 185/239 (77.41%), Query Frame = 0


Query: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY------T 60
           MS  +IS+    IHH  +VF YSRKLLLHSSLH L+FTA APS+V H   E Y      T
Sbjct: 1   MSIATISTN---IHH--EVFRYSRKLLLHSSLHKLSFTAAAPSAV-HDQSEFYSGGDSTT 60

Query: 61  FDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDP--HPSSTTSAPVGVHKKAI 120
           FDTNVVMVLSVLLCALICSL LNS+IRCALKCSRF+VS+D   HP+ T++   GVHKKAI
Sbjct: 61  FDTNVVMVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTST---GVHKKAI 120

Query: 121 KSFTMVQFSPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180
           KSFT+VQFSPDLNLPGLDSECVICLS+FV G+KLRLLPKCNHGFHVKCIDKWLSSHSSCP
Sbjct: 121 KSFTVVQFSPDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180

Query: 181 KCRQCLVQTSQKIAGV--------------SGPASPPPPAI--NLTPLDPEARVRNLWL 215
           KCRQCLVQT +KIAGV              S P  PPPP++  NL PL+PEA VRNL L
Sbjct: 181 KCRQCLVQTCEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL 230

[Close]

BLAST of Cp4.1LG16g00700 vs. ExPASy TrEMBL
Match: A0A1S3CDJ3 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499651 PE=3 SV=1)

HSP 1 Score: 296 bits (757), Expect = 6.30e-99
Identity = 167/239 (69.87%), Postives = 185/239 (77.41%), Query Frame = 0


Query: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY------T 60
           MS  +IS+    IHH  +VF YSRKLLLHSSLH L+FTA APS+V H   E Y      T
Sbjct: 1   MSIATISTN---IHH--EVFRYSRKLLLHSSLHKLSFTAAAPSAV-HDQSEFYSGGDSTT 60

Query: 61  FDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDP--HPSSTTSAPVGVHKKAI 120
           FDTNVVMVLSVLLCALICSL LNS+IRCALKCSRF+VS+D   HP+ T++   GVHKKAI
Sbjct: 61  FDTNVVMVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTST---GVHKKAI 120

Query: 121 KSFTMVQFSPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180
           KSFT+VQFSPDLNLPGLDSECVICLS+FV G+KLRLLPKCNHGFHVKCIDKWLSSHSSCP
Sbjct: 121 KSFTVVQFSPDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180

Query: 181 KCRQCLVQTSQKIAGV--------------SGPASPPPPAI--NLTPLDPEARVRNLWL 215
           KCRQCLVQT +KIAGV              S P  PPPP++  NL PL+PEA VRNL L
Sbjct: 181 KCRQCLVQTCEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL 230

[Close]

BLAST of Cp4.1LG16g00700 vs. ExPASy TrEMBL
Match: A0A0A0LQ73 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G301540 PE=3 SV=1)

HSP 1 Score: 285 bits (728), Expect = 1.99e-94
Identity = 159/238 (66.81%), Postives = 176/238 (73.95%), Query Frame = 0


Query: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTAD--APSSVLHRPLESY----- 60
           MS  SIS+ + L     QVF+YSRKLLLHSSLH L+FT    AP S +H   E Y     
Sbjct: 1   MSIASISTNY-LYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSGGDS 60

Query: 61  -TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDPHPSSTTSAPVGVHKKAI 120
            TFDTNVVMVLSVLLCALICSL LNSIIRCALKCSR +VS+D H    T    GVHKKAI
Sbjct: 61  TTFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSND-HRHRLTPTSTGVHKKAI 120

Query: 121 KSFTMVQFSPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180
           KSFT+VQFS DLNLPGLD ECVICLS+F  G+KLRLLPKCNHGFHVKCIDKWLSSHSSCP
Sbjct: 121 KSFTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180

Query: 181 KCRQCLVQTSQKIAGVSG-------------PASPPPPAI--NLTPLDPEARVRNLWL 215
           KCRQCLVQT +KIAGV+              P+ PPPP++  +L PL+PEA VRNL L
Sbjct: 181 KCRQCLVQTCEKIAGVASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLRL 236

[Close]

BLAST of Cp4.1LG16g00700 vs. TAIR 10
Match: AT1G49230.1 (RING/U-box superfamily protein )

HSP 1 Score: 201.8 bits (512), Expect = 5.4e-52
Identity = 112/200 (56.00%), Postives = 138/200 (69.00%), Query Frame = 0


Query: 22  YSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIR 81
           YSRKLL H+   + T    APS      +    FD NVVMVLSVLLCAL+CSLGLNSIIR
Sbjct: 26  YSRKLLFHTHDQSPT---PAPSPY----VGDNNFDANVVMVLSVLLCALVCSLGLNSIIR 85

Query: 82  CALKCSRFVVSD---DPHPSSTTSAPVGVHKKAIKSFTMVQFSPDLNLPGLDSECVICLS 141
           CAL+CS  V S+   D +P   T+   GV +KA+KSF  V +S +LNLPGLD+EC ICLS
Sbjct: 86  CALRCSNLVPSEAGGDNYPVRLTN--TGVKRKALKSFQTVSYSTELNLPGLDTECAICLS 145

Query: 142 DFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPAS----- 201
           +FV  E+++LLP C+HGFHV+CIDKWLSSHSSCP CR CL+QT +KIA  S  +S     
Sbjct: 146 EFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLIQTCEKIADCSQTSSLNSTQ 205

Query: 202 PPPPAI--NLTPLDPEARVR 212
           PP  +I   + PL+PE  +R
Sbjct: 206 PPQDSIILQIAPLEPERWIR 216

[Close]

BLAST of Cp4.1LG16g00700 vs. TAIR 10
Match: AT1G49220.1 (RING/U-box superfamily protein )

HSP 1 Score: 184.5 bits (467), Expect = 9.0e-47
Identity = 111/217 (51.15%), Postives = 140/217 (64.52%), Query Frame = 0


Query: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTN 60
           MSA  + S  Q         + SRKLLLH+     T  A A   V   PL ++      N
Sbjct: 1   MSANELPSSAQAFQEQFLGGFVSRKLLLHNPFDHNTQRAFA---VAPSPLITHENNLSGN 60

Query: 61  VVMVLSVLLCALICSLGLNSIIRCALKCS-RFVVSDD-PHPSSTT-SAPVGVHKKAIKSF 120
           V+M+LS+L+C +IC LGL+ IIRCAL+ S RF++S+  P  SST  S+  G+ KKA++ F
Sbjct: 61  VMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSNKGIKKKALRMF 120

Query: 121 TMVQFSPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCR 180
            +V +SP++NLPGLD ECVICLSDFV GE+LRLLPKCNHGFHV+CIDKWL  H +CPKCR
Sbjct: 121 PVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCR 180

Query: 181 QCLVQTSQKIAG-----VSGPASPPPPAI-NLTPLDP 207
            CLV+T QKI G      S  A P    I  + PL+P
Sbjct: 181 NCLVETCQKILGDFSQADSVTAEPTEIVIVTIVPLEP 214

[Close]

BLAST of Cp4.1LG16g00700 vs. TAIR 10
Match: AT1G49210.1 (RING/U-box superfamily protein )

HSP 1 Score: 184.5 bits (467), Expect = 9.0e-47
Identity = 105/221 (47.51%), Postives = 141/221 (63.80%), Query Frame = 0


Query: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSL--HALTFTADAPSSVLHRPLESYTFDTN 60
           MSA  + +  Q +       + +RKLLLH     ++L   A APS ++           N
Sbjct: 1   MSANELPASAQSLQEQFLGSFVTRKLLLHDPFDHNSLRVFAVAPSPLI---THENNLKGN 60

Query: 61  VVMVLSVLLCALICSLGLNSIIRCAL-KCSRFVVSDDPHPSST--TSAPVGVHKKAIKSF 120
           V+M+LSVL+C +IC LGL+ IIRCA  + SRF++S+     ST  +S+  G+ KKA++ F
Sbjct: 61  VLMLLSVLICGIICCLGLHYIIRCAFRRSSRFMISEPISSLSTPRSSSNKGIKKKALRMF 120

Query: 121 TMVQFSPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCR 180
            +V +S ++NLPG+  ECVICLSDFV GE+LRLLPKCNHGFHV+CIDKWL  H +CPKCR
Sbjct: 121 PVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCR 180

Query: 181 QCLVQTSQKIAG----VSGPASPPPPA--INLTPLDPEARV 211
            CLV+T QKI G        AS P  +  + + PL+PE RV
Sbjct: 181 HCLVETCQKILGDFSQADSMASTPTESVIVRIDPLEPEGRV 218

[Close]

BLAST of Cp4.1LG16g00700 vs. TAIR 10
Match: AT1G49200.1 (RING/U-box superfamily protein )

HSP 1 Score: 181.4 bits (459), Expect = 7.6e-46
Identity = 102/204 (50.00%), Postives = 135/204 (66.18%), Query Frame = 0


Query: 21  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTNVVMVLSVLLCALICSLGLNS 80
           + SRKLLLH+     T  A A   V   PL ++      NV+M+LSVL+C +IC LGL+ 
Sbjct: 22  FVSRKLLLHNPFDHNTQRAFA---VAPSPLITHENNLSGNVLMLLSVLICGIICCLGLHY 81

Query: 81  IIRCAL-KCSRFVVSDDPHPSSTT--SAPVGVHKKAIKSFTMVQFSPDLNLPGLDSECVI 140
           IIRCA  + S F++S+     ST   S+  G++KKA++ F +V +SP++NLPGL  ECVI
Sbjct: 82  IIRCAFRRTSSFMISEPIAGLSTPCGSSNKGINKKALRMFPVVSYSPEMNLPGLGEECVI 141

Query: 141 CLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPA--- 200
           CLSDFV GE++R+LPKC+HGFHV+CIDKWL  H +CPKCR CLV+T QKI G    A   
Sbjct: 142 CLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCLVETCQKILGDFSQADQV 201

Query: 201 SPPPPA---INLTPLDPEARVRNL 214
           +  P A   + + PL+PE RV  L
Sbjct: 202 AATPTASVIVRIAPLEPEGRVNIL 222

[Close]

BLAST of Cp4.1LG16g00700 vs. TAIR 10
Match: AT3G18773.1 (RING/U-box superfamily protein )

HSP 1 Score: 175.6 bits (444), Expect = 4.2e-44
Identity = 97/200 (48.50%), Postives = 127/200 (63.50%), Query Frame = 0


Query: 21  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSII 80
           + SRKL     L  + F  +A  +  H P +      NV+M+LS+LLC +ICSLGL+ II
Sbjct: 22  FVSRKL-----LQQIPFAHNAQQA--HVP-DKNNLSGNVLMLLSILLCGIICSLGLHYII 81

Query: 81  RCALKCSR-FVVSDD---PHPSSTTSAPVGVHKKAIKSFTMVQFSPDLNLPGLDSECVIC 140
           RCA   SR F++SD    P     +S   G+ KKA+K   +V +SP++NLPG+  ECVIC
Sbjct: 82  RCAFIRSRSFMISDPISIPSTPRDSSVNKGIKKKALKMLPVVNYSPEINLPGVGEECVIC 141

Query: 141 LSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPP 200
           LSDFV GE+LR+LPKCNHGFH++CIDKWL+ H +CPKCR CLV T QK+      A    
Sbjct: 142 LSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCRHCLVDTCQKVLSDCDAADQVA 201

Query: 201 PA------INLTPLDPEARV 211
                   I ++PL+PEARV
Sbjct: 202 ATATESIDIRISPLEPEARV 213

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g00700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQG7	7.7e-51	56.00	RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1	[more]
P0C034	1.3e-45	51.15	RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1	[more]
Q6NML0	1.3e-45	47.51	E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana OX=3702 GN=ATL76 PE=1 ...	[more]
Q94BY6	1.1e-44	50.00	RING-H2 finger protein ATL75 OS=Arabidopsis thaliana OX=3702 GN=ATL75 PE=2 SV=1	[more]
Q9LS99	5.9e-43	48.50	RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1	[more]

BLAST of Cp4.1LG16g00700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512393.1	4.65e-155	100.00	RING-H2 finger protein ATL78-like [Cucurbita pepo subsp. pepo] >XP_023522416.1 R...	[more]
KAG6571357.1	8.66e-151	97.67	RING-H2 finger protein ATL78, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022927999.1	3.53e-150	97.21	RING-H2 finger protein ATL78-like [Cucurbita moschata]	[more]
XP_022971702.1	1.18e-148	95.35	RING-H2 finger protein ATL78-like [Cucurbita maxima]	[more]
XP_038901957.1	3.28e-101	73.89	RING-H2 finger protein ATL78-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG16g00700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJK6	1.71e-150	97.21	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111434900...	[more]
A0A6J1I2P6	5.72e-149	95.35	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111470371 P...	[more]
A0A5A7TCX2	6.30e-99	69.87	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CDJ3	6.30e-99	69.87	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499651 PE=3 ...	[more]
A0A0A0LQ73	1.99e-94	66.81	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G301540 PE...	[more]

BLAST of Cp4.1LG16g00700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49230.1	5.4e-52	56.00	RING/U-box superfamily protein	[more]
AT1G49220.1	9.0e-47	51.15	RING/U-box superfamily protein	[more]
AT1G49210.1	9.0e-47	47.51	RING/U-box superfamily protein	[more]
AT1G49200.1	7.6e-46	50.00	RING/U-box superfamily protein	[more]
AT3G18773.1	4.2e-44	48.50	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 133..174 e-value: 2.6E-7 score: 40.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 132..175 e-value: 3.8E-14 score: 52.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 133..175 score: 12.356501
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 93..180 e-value: 6.0E-22 score: 79.1
None	No IPR available	PANTHER	PTHR46905:SF7	RING-H2 FINGER PROTEIN ATL78	coord: 5..212
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 132..175 e-value: 2.41445E-16 score: 68.1055
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 111..180
IPR044602	RING-H2 finger protein ATL10/ATL75-79	PANTHER	PTHR46905	RING-H2 FINGER PROTEIN ATL78	coord: 5..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g00700.1	Cp4.1LG16g00700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity