Cp4.1LG16g00360 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g00360
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Patatin
Location	Cp4.1LG16: 308681 .. 312597 (-)
RNA-Seq Expression	Cp4.1LG16g00360
Synteny	Cp4.1LG16g00360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGAGCTCATAACAATACTCAGCATCGATGGCGGTGGCATCAAAGGCATCATCCCCGGAACTGTTCTCGCCTTTCTCGAATCCAAACTTCAGGTGTTTGACAAAACTTTACGTTCTAACTTTTTTTTTTCTATATATGTAACTATCCAAGCCCATCGCTAGCAGAAATTATCCACTTTGACCCATTACGTATTATCGTCAGCCTCACAGATTTAAAACGCATTTAATAGGGACACGTATCCACACTTTTGTAAGAAATACTTTGTTCCCCTCTCCAATCTATGTGGGGAACTCACAATATCTGCTAGCAGTGGACTTGAACTGTTACAAATGGTATCAGAGCTAGACATTGGACGGTGTGCCAAAGAGGACGTTGGCTCCGAAGGGGTAGATTGTGAGATCTCATGTCGATTAGAGAGACGTTGACCAATGTTGTCATTCCGGCTTTCGACATCAAGATTCTCCAACCGGTCATCTTCAACACCCATGATGTAATCAAAATCATGTCTGGTTTTATTTTTTATTTTTTCTTAAATTATAAATTTATTAGAACGAACATTTTTATTTTTAAGCACTTAAAAAGTTATTGGTCGGGTGTGAATATTACGCAGGCAAAAGTAAATGCATTGAAGAATCCGAGGCTGGCGGATGTGTGCTTGGCCACTTCGGCAGCGCCCATATTCTTGCCAGTCCATTTCTTTGAGACCAAGGACGATGTAGCAAACACCACTCGTACTTACGACCTCATTGATGGTGCCATTGCCATTAATAATCCTGTGAGTTACTTTCGTTAGTACCGCTTGTTCTTTATTGAAACACAAATTTACCCTTAAACTTCTTTTGAGTAGTAACTTTTTTTTACCCTAACTTTCAATTTCATTAAATAGCACGATAAAACTTAACTGATTAGTGTAATTTTTATCGAAAGATCATAGCTGTATCTCAATAAGGTCATAATAACTATATAATTCAATTAAAAAGATTTAAGTATATAGATATTTTAAGATACCTAAATATTTTAGGATAACTATTTACATTTTGAGATATTTTAGGAATAAATCTTGAAGATCGCTCATGTGTGGTCTACACGGTTTAGTCTCTACGATATATATCTCTCCTATAGTTTTTTTTTTCGGTAATGTTGGGTATCTTTTATTGATTGGTCTTAAGAAAGATTGTGAATATTTCCCACCAAAGATTTGTGTTCAACGTCAGAGCAAGGTTGTGATAAGTTGTGTAATCTCTTAAAACTCTTAGTATGCTCTATAAGTTGCGCTCTACCTGATCTTTCATATTAGAAACGATTTCTTGAGTTGTTAATGAGTGAGTTTCTTCCTGTCATGAGTAGTCCTTGACTTTGCAAGTTATGTGTTGAAAACTAGTTTGTTTGGTAGTACTGAAATACTACCAATACAACCGGTGATCTTCAAGACATTGAATGAATTAGAAGGACAAGGCCTTTGTTGGATTTCTAATAATCGGCCGTGAAATCCTTTATTTTCGGTGAGAGAAAATTGTCAACAACAGGTTGTTAGAAGGAAAATACAATGCCTAAAATAAGAAGAGAGAGAATGATGAAATTTTGACTGCCTTTAATAAACACATTTCCTATTTAAATATAACCTATCCGTTAAGAGTGGCCAACTGAATCTGTGCCCGTTCGTAGAAAATTGTCGTCTAAGAATTCGCTAATCCGTTTGTCAAATGTTCAAACGGAAACGGAGAATTAAATGTAAACGTGTGAATCTAACTAAGGACAAAGGTTTTATCTAACCGCCTTTGGGAGGCCATTAGCAAAAGTAAAATTATGCTGCCAGAGAAAGAGGCTAATGGTGCCTTGTGCAAATGAAGAATTAAAATAAACCAAGCAATATTTGCCTTGAAAACCACCGCCGAAGAAGAGATGTTGGATTACATTTAGGATGATAAGACACCGAAAGAAGCATGAGAAATGTTCATGACACTTTTCTCAAAGAAGAATATAGAAGGTTTGTTATGGTTGTACAAGAATGACCCGTTCAACCATTACTGGTAGAGTTTCAAAGTTTTCTAGCGAGCAAAAAAGTCATGGCTAAACAAATAGGAGGCATCACGTTGAAAAGTGAAGAAGAAGCACTCTACACAAATAAGAGTCGGAGCAACAATAAGTCACCCACCAAAACTAAATACAAAAATAGAGGAATTCTCCAACGAACTGTACAACCTTAAAAGGTTAGAAAAATGACAACAAGAGTTTACAAGACAAGAGATTTGAAGGTATCTGGTATAACAGATAAAAAAAAAAAAAGAAGGGTCATATGTCCAAGAATTTTTTGTCCAAAAAAGGGTACATCGAAACAATATGACAACCTCGAAAAAGGAGATAGATAATGAATGAGATACAAAATAACATATGCTTTAGTGTTAATGGCAATGATGGGAGAACATATCGGTTATGAAAATGGCTCGATCTTGATTCAGGATGCTCAAACTACATGACTGCGAACAAAGAAAACTGTAAGACAAGAAATAGTACAAAGGAAGTCGTGTGGTATGTACAACCAACAATTCACAGTTGCCGATTGATCAAACAGACAATATAATGATTGTGTCTGATAATAAATCTGATATGGTAACGTTCATTGACAACTATTCAAGATATGTGCGGATTTTTTCATGGCAAAAAAGTCTGACACATTCTCAAAATTTCAGGATTTTAGACAATGGTGGAAAATATATGTCAAAGGATTTTGATTGATATCTACACAAGTGCACGATATGTTATCAATTTACATGTGCCAACACGTCAAAAAAAAAATGGTATAGCAGAGAGAAAAAGTCAACATCTTATAGAGGTTTATCGAAGCATGCTACACGTAAAAAATGTTCCATGAAAACTTTGAACTGAAGTTATGTGAACTGTTGCCCATGTGATCAACAAGCTTCTCTAGTCAAAGTTAGGTGTCATCTCGGAGTGAAGCATTATGAGACACGAAACCTTCAATTAGCTACTTCTCAGTATTTGACTGCGTTTGCTATGTATCAGGTTTGATAAGAAAGCAATCAAACATAAATTGTTGGATATGACAATCAAAGACAAGGGGGAGAGTGTTGTGATCCGAACGGAAAGATGCTACACTTCGAGAGGTGTAGTTTTTTTATGAAGCATTTTCGTGATGGTCCTGATGAGAAGAAACTTTTACCGTACTCAAACAATATTGACAAAATTCTACAACAGAAGACAGGAGAGTAAACGGTATACATTTGGTCAATTGTTTATGCACCTGAAAATCCAAGTGACACTAATGTTAGTGAGTAAGAAGTGATTCAACCAACCAAACTTAGTGAAAAGAAAATAACACTTAAACAACTTAGATGTTAATCTGTTAAAAGATATCACTAGCTCCGTAGAGTCAAACCCATTAATTATACGAGCTCATACGGTAAAATTTTAGGAAGAAATTCTCATTCATCCTTGGTAAATGTCTATTTTGATAAGTTTCAATTTAATTTCTACAATTTAGACTTTAAAATTTGATTACCACGTTTCCACCCTTTTTCGATCTCCAAATCTTCATCAAAACTATCTTCGTATTCAGGTAACTCTATTATAAAATGCCTTAAATTTTTGAGTTGATTAGTGATTTAACACGATGGATGTAAAAACTTTAAACAAAAACGGTTTGATGATGGATTTCTTATTCTAAGAAAAGAGAGCATTGTTTGTTAAACAGGATGACTCGTTAACCGGCGATACCGCATCGGTGGATATAGCGACTCCACAAAATTTAATAAAGCTTGTGAAGATTGGGGAGGAGTTAATAAAGAAACCCGTGTCAAGGGTTAATTTAGAAACAGGAAGATATGAGACTGTTGATGGAGAAGGTAGCAATGAGGAAGCTCTCACCAAGTTTGCCAAATTGCTCCATCAAGAACGA

mRNA sequence

AGGGAGCTCATAACAATACTCAGCATCGATGGCGGTGGCATCAAAGGCATCATCCCCGGAACTCACTTAAAAAGTTATTGGTCGGGTGTGAATATTACGCAGGCAAAAGTAAATGCATTGAAGAATCCGAGGCTGGCGGATGTGTGCTTGGCCACTTCGGCAGCGCCCATATTCTTGCCAGTCCATTTCTTTGAGACCAAGGACGATGTAGCAAACACCACTCGTACTTACGACCTCATTGATGAAAAGAGAGCATTGTTTGTTAAACAGGATGACTCGTTAACCGGCGATACCGCATCGGTGGATATAGCGACTCCACAAAATTTAATAAAGCTTGTGAAGATTGGGGAGGAGTTAATAAAGAAACCCGTGTCAAGGGTTAATTTAGAAACAGGAAGATATGAGACTGTTGATGGAGAAGGTAGCAATGAGGAAGCTCTCACCAAGTTTGCCAAATTGCTCCATCAAGAACGA

Coding sequence (CDS)

AGGGAGCTCATAACAATACTCAGCATCGATGGCGGTGGCATCAAAGGCATCATCCCCGGAACTCACTTAAAAAGTTATTGGTCGGGTGTGAATATTACGCAGGCAAAAGTAAATGCATTGAAGAATCCGAGGCTGGCGGATGTGTGCTTGGCCACTTCGGCAGCGCCCATATTCTTGCCAGTCCATTTCTTTGAGACCAAGGACGATGTAGCAAACACCACTCGTACTTACGACCTCATTGATGAAAAGAGAGCATTGTTTGTTAAACAGGATGACTCGTTAACCGGCGATACCGCATCGGTGGATATAGCGACTCCACAAAATTTAATAAAGCTTGTGAAGATTGGGGAGGAGTTAATAAAGAAACCCGTGTCAAGGGTTAATTTAGAAACAGGAAGATATGAGACTGTTGATGGAGAAGGTAGCAATGAGGAAGCTCTCACCAAGTTTGCCAAATTGCTCCATCAAGAACGA

Protein sequence

RELITILSIDGGGIKGIIPGTHLKSYWSGVNITQAKVNALKNPRLADVCLATSAAPIFLPVHFFETKDDVANTTRTYDLIDEKRALFVKQDDSLTGDTASVDIATPQNLIKLVKIGEELIKKPVSRVNLETGRYETVDGEGSNEEALTKFAKLLHQER

Homology

[Close]

BLAST of Cp4.1LG16g00360 vs. ExPASy Swiss-Prot
Match: B8AQW7 (Patatin-like protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=PLP1 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.0e-15
Identity = 67/225 (29.78%), Postives = 87/225 (38.67%), Query Frame = 0


Query: 35  AKVNALKNPRLADVCLATSAAPIFLPVHFFETKDDVANTTRTYDLID------------- 94
           AK   LKN  L+D+C++TSAAP +LP H F+T DD     R +DLID             
Sbjct: 165 AKSMPLKNALLSDICISTSAAPTYLPAHCFQTTDDATGKVREFDLIDGGVAANNPTMVAM 224

Query: 95  ----------EKRALF-VK----------------------------------------- 154
                     +K  L+ VK                                         
Sbjct: 225 TQITKKIMVKDKEELYPVKPSDCGKFLVLSLGTGSTSDQGMYTARQCSRWGIVRWLRNKG 284

Query: 155 ------------------------------------QDDSLTGDTASVDIATPQNLIKLV 159
                                               QD++L GD A+VD AT  N+  LV
Sbjct: 285 MAPIIDIFMAASSDLVDIHAAVMFQSLHSDGDYLRIQDNTLHGDAATVDAATRDNMRALV 344

[Close]

BLAST of Cp4.1LG16g00360 vs. ExPASy Swiss-Prot
Match: Q84QY3 (Patatin-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PLP1 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.0e-15
Identity = 67/225 (29.78%), Postives = 87/225 (38.67%), Query Frame = 0


Query: 35  AKVNALKNPRLADVCLATSAAPIFLPVHFFETKDDVANTTRTYDLID------------- 94
           AK   LKN  L+D+C++TSAAP +LP H F+T DD     R +DLID             
Sbjct: 183 AKSMPLKNALLSDICISTSAAPTYLPAHCFQTTDDATGKVREFDLIDGGVAANNPTMVAM 242

Query: 95  ----------EKRALF-VK----------------------------------------- 154
                     +K  L+ VK                                         
Sbjct: 243 TQITKKIMVKDKEELYPVKPSDCGKFLVLSVGTGSTSDQGMYTARQCSRWGIVRWLRNKG 302

Query: 155 ------------------------------------QDDSLTGDTASVDIATPQNLIKLV 159
                                               QD++L GD A+VD AT  N+  LV
Sbjct: 303 MAPIIDIFMAASSDLVDIHAAVMFQSLHSDGDYLRIQDNTLHGDAATVDAATRDNMRALV 362

[Close]

BLAST of Cp4.1LG16g00360 vs. ExPASy Swiss-Prot
Match: O23181 (Patatin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLP3 PE=2 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 3.2e-14
Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 79  LIDEKRALFVKQDDSLTGDTASVDIATPQNLIKLVKIGEELIKKPVSRVNLETGRYETVD 138
           L  EK  L +  DDSL GD  SVDI+T +N+  LV++GE L+KK VSRVNLE+G Y+ + 
Sbjct: 338 LRSEKNYLRI-DDDSLKGDLGSVDISTEKNMEGLVEVGEALLKKRVSRVNLESGHYQPIS 397

Query: 139 GEGSNEEALTKFAKLLHQER 159
              +NEEAL +FAK+L +ER
Sbjct: 398 ENVTNEEALKRFAKVLSEER 416

[Close]

BLAST of Cp4.1LG16g00360 vs. ExPASy Swiss-Prot
Match: A2YW91 (Patatin-like protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=PLP2 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.7e-13
Identity = 65/228 (28.51%), Postives = 83/228 (36.40%), Query Frame = 0


Query: 34  QAKVNALKNPRLADVCLATSAAPIFLPVHFFETKDDVANTTRTYDLID------------ 93
           + K   LKN  L+D+ ++TSAAP F P H+FETKDD    TR ++L+D            
Sbjct: 171 ELKYKPLKNALLSDISISTSAAPTFFPAHYFETKDD-NGQTREFNLVDGGVAANNPTLCA 230

Query: 94  ------------------------------------------------------------ 153
                                                                       
Sbjct: 231 MSQVSKYIILEDKEDCDFFPVKPTEYGKFMVISIGCGSNHDQKYKAKDAAKWGIFNWLIK 290

Query: 154 -------------------------------EKRALFVKQDDSLTGDTASVDIATPQNLI 159
                                          EK  L + Q D LTG   S+D  + +N+ 
Sbjct: 291 GSSAPIIDMFTSASADMVDIHLGVLFSALQCEKNYLRI-QYDQLTGSAGSIDDCSKENMD 350

[Close]

BLAST of Cp4.1LG16g00360 vs. ExPASy Swiss-Prot
Match: Q6ZJD3 (Patatin-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PLP2 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.7e-13
Identity = 65/228 (28.51%), Postives = 83/228 (36.40%), Query Frame = 0


Query: 34  QAKVNALKNPRLADVCLATSAAPIFLPVHFFETKDDVANTTRTYDLID------------ 93
           + K   LKN  L+D+ ++TSAAP F P H+FETKDD    TR ++L+D            
Sbjct: 171 ELKYKPLKNALLSDISISTSAAPTFFPAHYFETKDD-NGQTREFNLVDGGVAANNPTLCA 230

Query: 94  ------------------------------------------------------------ 153
                                                                       
Sbjct: 231 MSQVSKYIILEDKEDCDFFPVKPTEYGKFMVISIGCGSNHDQKYKAKDAAKWGIFNWLIK 290

Query: 154 -------------------------------EKRALFVKQDDSLTGDTASVDIATPQNLI 159
                                          EK  L + Q D LTG   S+D  + +N+ 
Sbjct: 291 GSSAPIIDMFTSASADMVDIHLGVLFSALQCEKNYLRI-QYDQLTGSAGSIDDCSKENMD 350

[Close]

BLAST of Cp4.1LG16g00360 vs. NCBI nr
Match: XP_023513192.1 (patatin-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243 bits (619), Expect = 9.32e-79
Identity = 141/205 (68.78%), Postives = 146/205 (71.22%), Query Frame = 0


Query: 1   RELITILSIDGGGIKGIIPGTHLKSYWSGV-----------------------NITQAKV 60
           RELITILSIDGGGIKGIIPGT L    S +                       N   AKV
Sbjct: 9   RELITILSIDGGGIKGIIPGTVLAFLESKLQVETLTNVVIPAFDIKILQPVIFNTHDAKV 68

Query: 61  NALKNPRLADVCLATSAAPIFLPVHFFETKDDVANTTRTYDLIDEKRAL----------- 120
           NALKNPRLADVCLATSAAPIFLPVHFFETKDDVANTTRTYDLID   A+           
Sbjct: 69  NALKNPRLADVCLATSAAPIFLPVHFFETKDDVANTTRTYDLIDGAIAINNPTLKFDYHV 128

Query: 121 ------------FVK-QDDSLTGDTASVDIATPQNLIKLVKIGEELIKKPVSRVNLETGR 158
                       +++ QDDSLTGDTASVDIATPQNLIKLVKIGEELIKKPVSRVNLETGR
Sbjct: 129 STLFRSPNLHQNYLRIQDDSLTGDTASVDIATPQNLIKLVKIGEELIKKPVSRVNLETGR 188

[Close]

BLAST of Cp4.1LG16g00360 vs. NCBI nr
Match: XP_022928023.1 (patatin-like protein 2 [Cucurbita moschata])

HSP 1 Score: 179 bits (455), Expect = 7.71e-52
Identity = 116/243 (47.74%), Postives = 125/243 (51.44%), Query Frame = 0


Query: 17  IIPGTHLKSYWSGV-NITQAKVNALKNPRLADVCLATSAAPIFLPVHFFETKDDVANTTR 76
           +IP   +K     + N   AKVNALKNPRLADVCLATSAAPI+LP HFFETKDDVANTTR
Sbjct: 141 VIPAFDIKILQPVIFNTHDAKVNALKNPRLADVCLATSAAPIYLPAHFFETKDDVANTTR 200

Query: 77  TYDLIDEKRAL-----------------------FVK----------------------- 136
           TYDLID   A+                        +K                       
Sbjct: 201 TYDLIDGAIAINNPTMAAITHMNREIEMNHIANSMIKPNDATRMLVLSLGTGLPKHEEKY 260

Query: 137 ------------------------------------------------------QDDSLT 158
                                                                 QDDSL 
Sbjct: 261 NATQASKWGAFSWIYQNGSTPIIDFFSDASSDMVDYHVSTLFRSPNLHQNYLRIQDDSLI 320

[Close]

BLAST of Cp4.1LG16g00360 vs. NCBI nr
Match: KAG6571406.1 (Patatin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 179 bits (455), Expect = 7.90e-52
Identity = 116/242 (47.93%), Postives = 124/242 (51.24%), Query Frame = 0


Query: 17  IIPGTHLKSYWSGV-NITQAKVNALKNPRLADVCLATSAAPIFLPVHFFETKDDVANTTR 76
           +IP   +K     + N   AKVNALKNPRLADVCLATSAAPI+LP HFFETKDDVANTTR
Sbjct: 142 VIPAFDIKILQPVIFNTHDAKVNALKNPRLADVCLATSAAPIYLPAHFFETKDDVANTTR 201

Query: 77  TYDLIDEKRAL-----------------------FVK----------------------- 136
           TYDLID   A+                        +K                       
Sbjct: 202 TYDLIDGAIAINNPTMAAITHMNREIEMNHIANSMIKPNDATRMLVLSLGTGLPKHEEKY 261

Query: 137 ------------------------------------------------------QDDSLT 157
                                                                 QDDSLT
Sbjct: 262 NATQASKWGAFSWIYQNGSTPIIDFFFDASSDMVDYHVSTLFRSPNLHQNYLRIQDDSLT 321

[Close]

BLAST of Cp4.1LG16g00360 vs. NCBI nr
Match: XP_038901544.1 (patatin-like protein 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 168 bits (425), Expect = 2.33e-47
Identity = 110/259 (42.47%), Postives = 126/259 (48.65%), Query Frame = 0


Query: 1   RELITILSIDGGGIKGIIPGTHLKSYWSGVNITQ-AKVNALKNPRLADVCLATSAAPIFL 60
            +L+  LS+       +IP   +K     +  T  AK+NALKNPRLADVCLATSAAP FL
Sbjct: 127 NDLVGDLSLKQTLTNVVIPAFDIKFLQPVIFTTNDAKINALKNPRLADVCLATSAAPTFL 186

Query: 61  PVHFFETKDDVANTTRTYDLID----------------------------------EKRA 120
           P HFFETKDDV N TRTYD++D                                   +R 
Sbjct: 187 PAHFFETKDDVTNATRTYDVVDGAIAVNNPTLAAITHINREIAVHHNANSRLKANDTRRM 246

Query: 121 LFVK-------------------------------------------------------- 158
           L +                                                         
Sbjct: 247 LVLSLGTGLAKHEEKYNATQASKWGVLGWIYNGGSTPIIDFFSDASSDMVDYHVSTLFQS 306

[Close]

BLAST of Cp4.1LG16g00360 vs. NCBI nr
Match: XP_038901545.1 (patatin-like protein 2 isoform X3 [Benincasa hispida])

HSP 1 Score: 166 bits (421), Expect = 2.33e-47
Identity = 110/266 (41.35%), Postives = 127/266 (47.74%), Query Frame = 0


Query: 1   RELITILSIDGGGIKGIIPGTHLKSYWSGVNITQ-AKVNALKNPRLADVCLATSAAPIFL 60
            +L+  LS+       +IP   +K     +  T  AK+NALKNPRLADVCLATSAAP FL
Sbjct: 62  NDLVGDLSLKQTLTNVVIPAFDIKFLQPVIFTTNDAKINALKNPRLADVCLATSAAPTFL 121

Query: 61  PVHFFETKDDVANTTRTYDLID---------------------------------EKRAL 120
           P HFFETKDDV N TRTYD++D                                 + R +
Sbjct: 122 PAHFFETKDDVTNATRTYDVVDGAIAVNNPTLAAITHINREIAVHHNANSRLKANDTRRM 181

Query: 121 FV---------------------------------------------------------- 158
            V                                                          
Sbjct: 182 LVLSLGTGLAKHEEKYNATQASKWGVLGWIYNGGSTPIIDFFSDASSDMVDYHVSTLFQS 241

[Close]

BLAST of Cp4.1LG16g00360 vs. ExPASy TrEMBL
Match: A0A6J1EMP6 (Patatin OS=Cucurbita moschata OX=3662 GN=LOC111434933 PE=3 SV=1)

HSP 1 Score: 179 bits (455), Expect = 3.73e-52
Identity = 116/243 (47.74%), Postives = 125/243 (51.44%), Query Frame = 0


Query: 17  IIPGTHLKSYWSGV-NITQAKVNALKNPRLADVCLATSAAPIFLPVHFFETKDDVANTTR 76
           +IP   +K     + N   AKVNALKNPRLADVCLATSAAPI+LP HFFETKDDVANTTR
Sbjct: 141 VIPAFDIKILQPVIFNTHDAKVNALKNPRLADVCLATSAAPIYLPAHFFETKDDVANTTR 200

Query: 77  TYDLIDEKRAL-----------------------FVK----------------------- 136
           TYDLID   A+                        +K                       
Sbjct: 201 TYDLIDGAIAINNPTMAAITHMNREIEMNHIANSMIKPNDATRMLVLSLGTGLPKHEEKY 260

Query: 137 ------------------------------------------------------QDDSLT 158
                                                                 QDDSL 
Sbjct: 261 NATQASKWGAFSWIYQNGSTPIIDFFSDASSDMVDYHVSTLFRSPNLHQNYLRIQDDSLI 320

[Close]

BLAST of Cp4.1LG16g00360 vs. ExPASy TrEMBL
Match: A0A1S3C6N3 (Patatin OS=Cucumis melo OX=3656 GN=LOC103497451 PE=3 SV=1)

HSP 1 Score: 162 bits (410), Expect = 4.77e-46
Identity = 107/260 (41.15%), Postives = 126/260 (48.46%), Query Frame = 0


Query: 1   RELITILSIDGGGIKGIIPGTHLKSYWSGVNITQ-AKVNALKNPRLADVCLATSAAPIFL 60
            +L+  L++       +IP   +K     +  T  AK+NAL+NPRLADVCLATSAAP FL
Sbjct: 64  NDLVGDLTLKQTLTNVVIPAFDIKILQPVIFTTNDAKINALRNPRLADVCLATSAAPTFL 123

Query: 61  PVHFFETKDDVANTTRTYDLID-----------------------------------EKR 120
           P HFFETKDDV N TRTYD+ID                                    +R
Sbjct: 124 PPHFFETKDDVTNATRTYDVIDGAIAVNNPTLAAITHINREIAIHHQKENSRIKANDTRR 183

Query: 121 ALFVK------------------------------------------------------- 158
            L +                                                        
Sbjct: 184 MLVLSLGTGLGKHEEKYNATQASKWGAFSWIFQGGSTPIIDFFSDASSDMVDYHVSTLFQ 243

[Close]

BLAST of Cp4.1LG16g00360 vs. ExPASy TrEMBL
Match: A0A5D3CPA6 (Patatin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002500 PE=3 SV=1)

HSP 1 Score: 162 bits (410), Expect = 2.13e-45
Identity = 107/260 (41.15%), Postives = 126/260 (48.46%), Query Frame = 0


Query: 1   RELITILSIDGGGIKGIIPGTHLKSYWSGVNITQ-AKVNALKNPRLADVCLATSAAPIFL 60
            +L+  L++       +IP   +K     +  T  AK+NAL+NPRLADVCLATSAAP FL
Sbjct: 129 NDLVGDLTLKQTLTNVVIPAFDIKILQPVIFTTNDAKINALRNPRLADVCLATSAAPTFL 188

Query: 61  PVHFFETKDDVANTTRTYDLID-----------------------------------EKR 120
           P HFFETKDDV N TRTYD+ID                                    +R
Sbjct: 189 PPHFFETKDDVTNATRTYDVIDGAIAVNNPTLAAITHINREIAIHHQKENSRIKANDTRR 248

Query: 121 ALFVK------------------------------------------------------- 158
            L +                                                        
Sbjct: 249 MLVLSLGTGLGKHEEKYNATQASKWGAFSWIFQGGSTPIIDFFSDASSDMVDYHVSTLFQ 308

[Close]

BLAST of Cp4.1LG16g00360 vs. ExPASy TrEMBL
Match: A0A1S3C627 (Patatin OS=Cucumis melo OX=3656 GN=LOC103497451 PE=3 SV=1)

HSP 1 Score: 162 bits (410), Expect = 2.13e-45
Identity = 107/260 (41.15%), Postives = 126/260 (48.46%), Query Frame = 0


Query: 1   RELITILSIDGGGIKGIIPGTHLKSYWSGVNITQ-AKVNALKNPRLADVCLATSAAPIFL 60
            +L+  L++       +IP   +K     +  T  AK+NAL+NPRLADVCLATSAAP FL
Sbjct: 129 NDLVGDLTLKQTLTNVVIPAFDIKILQPVIFTTNDAKINALRNPRLADVCLATSAAPTFL 188

Query: 61  PVHFFETKDDVANTTRTYDLID-----------------------------------EKR 120
           P HFFETKDDV N TRTYD+ID                                    +R
Sbjct: 189 PPHFFETKDDVTNATRTYDVIDGAIAVNNPTLAAITHINREIAIHHQKENSRIKANDTRR 248

Query: 121 ALFVK------------------------------------------------------- 158
            L +                                                        
Sbjct: 249 MLVLSLGTGLGKHEEKYNATQASKWGAFSWIFQGGSTPIIDFFSDASSDMVDYHVSTLFQ 308

[Close]

BLAST of Cp4.1LG16g00360 vs. ExPASy TrEMBL
Match: A0A6J1L4W9 (Patatin OS=Cucurbita maxima OX=3661 GN=LOC111499926 PE=3 SV=1)

HSP 1 Score: 158 bits (399), Expect = 9.12e-44
Identity = 107/261 (41.00%), Postives = 127/261 (48.66%), Query Frame = 0


Query: 1   RELITILSIDGGGIKGIIPGTHLKSYWSGV-NITQAKVNALKNPRLADVCLATSAAPIFL 60
            EL+  L+++      +IP   +K     + N   AKVNALKNP+L+DVCLATSAAP FL
Sbjct: 129 NELVGDLTLNQTLTNVVIPAFDIKVLQPVIFNTNDAKVNALKNPKLSDVCLATSAAPTFL 188

Query: 61  PVHFFETKDDVANTTRTYDLID----------------------------------EKRA 120
           P HFFETKD+ ANTTRTY++ID                                   +R 
Sbjct: 189 PAHFFETKDEEANTTRTYNVIDGAVAVNNPTLAAISHINRQIAVHQIETARIKANDARRM 248

Query: 121 LFVK-------------------------------------------------------- 158
           L +                                                         
Sbjct: 249 LVLSLGTGLPKHEEKYNATQASEWGALSWIFQLNSGSTPIIDFFTDASSDMVDFHVSTLF 308

[Close]

BLAST of Cp4.1LG16g00360 vs. TAIR 10
Match: AT4G37050.1 (PATATIN-like protein 4 )

HSP 1 Score: 79.7 bits (195), Expect = 2.3e-15
Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 79  LIDEKRALFVKQDDSLTGDTASVDIATPQNLIKLVKIGEELIKKPVSRVNLETGRYETVD 138
           L  EK  L +  DDSL GD  SVDI+T +N+  LV++GE L+KK VSRVNLE+G Y+ + 
Sbjct: 338 LRSEKNYLRI-DDDSLKGDLGSVDISTEKNMEGLVEVGEALLKKRVSRVNLESGHYQPIS 397

Query: 139 GEGSNEEALTKFAKLLHQER 159
              +NEEAL +FAK+L +ER
Sbjct: 398 ENVTNEEALKRFAKVLSEER 416

HSP 2 Score: 43.1 bits (100), Expect = 2.4e-04
Identity = 21/48 (43.75%), Postives = 29/48 (60.42%), Query Frame = 0


Query: 34  QAKVNALKNPRLADVCLATSAAPIFLPVHFFETKDDVANTTRTYDLID 82
           QA  N   N +L+D+C++TSAAP F P H F T +D       ++LID
Sbjct: 193 QAVNNQAMNAKLSDICISTSAAPTFFPAHRF-TNEDSEGIKHEFNLID 239

HSP 3 Score: 40.4 bits (93), Expect = 1.5e-03
Identity = 18/22 (81.82%), Postives = 21/22 (95.45%), Query Frame = 0


Query: 2  ELITILSIDGGGIKGIIPGTHL 24
          +L+TILSIDGGGI+GIIPGT L
Sbjct: 33 QLVTILSIDGGGIRGIIPGTIL 54

[Close]

BLAST of Cp4.1LG16g00360 vs. TAIR 10
Match: AT2G26560.1 (phospholipase A 2A )

HSP 1 Score: 72.4 bits (176), Expect = 3.7e-13
Identity = 40/69 (57.97%), Postives = 51/69 (73.91%), Query Frame = 0


Query: 90  QDDSLTGDTASVDIATPQNLIKLVKIGEELIKKPVSRVNLETGRYETVDGEGSNEEALTK 149
           QDD+LTGD ASVDIAT +NL  L K G+EL+KKPV+RVNL++G  E    E +NE AL K
Sbjct: 324 QDDTLTGDAASVDIATVENLDILAKTGDELLKKPVARVNLDSGCNENA-YETTNEHALIK 383

Query: 150 FAKLLHQER 159
            A +L +E+
Sbjct: 384 LAGILSKEK 391

HSP 2 Score: 46.2 bits (108), Expect = 2.8e-05
Identity = 21/48 (43.75%), Postives = 33/48 (68.75%), Query Frame = 0


Query: 34  QAKVNALKNPRLADVCLATSAAPIFLPVHFFETKDDVANTTRTYDLID 82
           + K + LK+  LAD+ ++TSAAP +LP HFF+  +D+    + Y+LID
Sbjct: 169 EVKNHPLKDATLADIAISTSAAPTYLPAHFFKV-EDLNGNAKEYNLID 215

[Close]

BLAST of Cp4.1LG16g00360 vs. TAIR 10
Match: AT4G37060.1 (PATATIN-like protein 5 )

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10
Identity = 28/68 (41.18%), Postives = 48/68 (70.59%), Query Frame = 0


Query: 91  DDSLTGDTASVDIATPQNLIKLVKIGEELIKKPVSRVNLETGRYETVDGEGSNEEALTKF 150
           DD+L GD +++D++T  NL  L+K+GE+++   V ++N++TG YE      +N+E L +F
Sbjct: 325 DDTLEGDASTLDLSTKSNLENLIKLGEKMLTNRVMQMNIDTGTYEPAAENINNDEQLKRF 384

Query: 151 AKLLHQER 159
           AK+L +ER
Sbjct: 385 AKILSEER 392

[Close]

BLAST of Cp4.1LG16g00360 vs. TAIR 10
Match: AT4G37060.2 (PATATIN-like protein 5 )

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10
Identity = 28/68 (41.18%), Postives = 48/68 (70.59%), Query Frame = 0


Query: 91  DDSLTGDTASVDIATPQNLIKLVKIGEELIKKPVSRVNLETGRYETVDGEGSNEEALTKF 150
           DD+L GD +++D++T  NL  L+K+GE+++   V ++N++TG YE      +N+E L +F
Sbjct: 346 DDTLEGDASTLDLSTKSNLENLIKLGEKMLTNRVMQMNIDTGTYEPAAENINNDEQLKRF 405

Query: 151 AKLLHQER 159
           AK+L +ER
Sbjct: 406 AKILSEER 413

[Close]

BLAST of Cp4.1LG16g00360 vs. TAIR 10
Match: AT4G37070.2 (Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 2.9e-10
Identity = 30/68 (44.12%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 91  DDSLTGDTASVDIATPQNLIKLVKIGEELIKKPVSRVNLETGRYETVDGEGSNEEALTKF 150
           DD+L GD +++D+AT  NL  L KIGE+++   V ++N++TG YE V    +N+E L ++
Sbjct: 325 DDTLEGDVSTMDLATKSNLENLQKIGEKMLTNRVMQMNIDTGVYEPVAENITNDEQLKRY 384

Query: 151 AKLLHQER 159
           AK+L  ER
Sbjct: 385 AKILSDER 392

HSP 2 Score: 42.0 bits (97), Expect = 5.3e-04
Identity = 18/48 (37.50%), Postives = 30/48 (62.50%), Query Frame = 0


Query: 34  QAKVNALKNPRLADVCLATSAAPIFLPVHFFETKDDVANTTRTYDLID 82
           Q  V+   + +++D+C+ TSAAP F P H+F  +D   N T  ++L+D
Sbjct: 169 QLLVDPSLDVKVSDICIGTSAAPTFFPPHYFSNEDSQGNKTE-FNLVD 215

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g00360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8AQW7	5.0e-15	29.78	Patatin-like protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=PLP1 PE=3 SV=1	[more]
Q84QY3	5.0e-15	29.78	Patatin-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PLP1 PE=3 SV=...	[more]
O23181	3.2e-14	53.75	Patatin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLP3 PE=2 SV=2	[more]
A2YW91	2.7e-13	28.51	Patatin-like protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=PLP2 PE=3 SV=1	[more]
Q6ZJD3	2.7e-13	28.51	Patatin-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PLP2 PE=3 SV=...	[more]

BLAST of Cp4.1LG16g00360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513192.1	9.32e-79	68.78	patatin-like protein 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022928023.1	7.71e-52	47.74	patatin-like protein 2 [Cucurbita moschata]	[more]
KAG6571406.1	7.90e-52	47.93	Patatin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038901544.1	2.33e-47	42.47	patatin-like protein 2 isoform X2 [Benincasa hispida]	[more]
XP_038901545.1	2.33e-47	41.35	patatin-like protein 2 isoform X3 [Benincasa hispida]	[more]

BLAST of Cp4.1LG16g00360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EMP6	3.73e-52	47.74	Patatin OS=Cucurbita moschata OX=3662 GN=LOC111434933 PE=3 SV=1	[more]
A0A1S3C6N3	4.77e-46	41.15	Patatin OS=Cucumis melo OX=3656 GN=LOC103497451 PE=3 SV=1	[more]
A0A5D3CPA6	2.13e-45	41.15	Patatin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002500 PE=3 ...	[more]
A0A1S3C627	2.13e-45	41.15	Patatin OS=Cucumis melo OX=3656 GN=LOC103497451 PE=3 SV=1	[more]
A0A6J1L4W9	9.12e-44	41.00	Patatin OS=Cucurbita maxima OX=3661 GN=LOC111499926 PE=3 SV=1	[more]

BLAST of Cp4.1LG16g00360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37050.1	2.3e-15	53.75	PATATIN-like protein 4	[more]
AT2G26560.1	3.7e-13	57.97	phospholipase A 2A	[more]
AT4G37060.1	1.3e-10	41.18	PATATIN-like protein 5	[more]
AT4G37060.2	1.3e-10	41.18	PATATIN-like protein 5	[more]
AT4G37070.2	2.9e-10	44.12	Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.1090.10	Cytosolic phospholipase A2 catalytic domain	coord: 72..158 e-value: 2.7E-10 score: 42.0
None	No IPR available	PANTHER	PTHR32176	XYLOSE ISOMERASE	coord: 3..24 coord: 33..82 coord: 88..158
None	No IPR available	PANTHER	PTHR32176:SF43	PATATIN	coord: 3..24
None	No IPR available	PANTHER	PTHR32176:SF43	PATATIN	coord: 33..82 coord: 88..158
IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase	SUPERFAMILY	52151	FabD/lysophospholipase-like	coord: 30..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g00360.1	Cp4.1LG16g00360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006629	lipid metabolic process
molecular_function	GO:0047372	acylglycerol lipase activity
molecular_function	GO:0004620	phospholipase activity