Cp4.1LG15g08800 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g08800
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	LOB domain-containing protein
Location	Cp4.1LG15: 8564234 .. 8567818 (+)
RNA-Seq Expression	Cp4.1LG15g08800
Synteny	Cp4.1LG15g08800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAGTAGATAATATTAATATATTTCATTTCTAGACGTTTCAATTCTTATCTCATCATAATTGTATTTTAAAATTTCATTCAACTCTAAATATAATGAATTATTATTATTATTATAAAAAAAAAATGTAAAAAAGATTAATGTTTTTTTACTTGTTTAGTTAATTGGATATTGAATATTGGGCTTGTGAAGGCCCATCTTCGTTATTGGGCTTTTGCATTGGACTTCGTGTTGATGCGCAAGATAGCGGGCCACCCATCTGGTTTCCATTTAATAATACCCAACGTGAGTTTTTGAAGATTTTGAAATGCGTCGACTAGGAAAAGATTTACAAGAATGTTTTATTCACCTCTTCAATCGAGGTGGGATCTTACAATCCACCCCCATTTAGAGCACATTGTCCTTAACTGACACTCGTTCCTCTTTCCAATCCATGAAGGATTTCACAATCTGCCCCTTCGAGGCCTAGTGTCCTCGTTGGCACATCGTCCCGTGTGCACCCCCTTTGAGGATCATTGTCCTCGCGTAATCAAATGAAATAAAGCAGCTCGATAAGACCCTATACCCAAAACTAACATCATATAACCCAATTGAGACATGGTAGAATAGGCTAAACTTCTCTTAATATCTTTTTGAACAAGAGCTAAAGTAGCTCCAAATAGTACCGTTATTATACCTATAAAAGCTATTAGATTCATGATGTAAGGTAAGGTATTACTATAAAAAGCGAAAGAAAGGGAACCACAAGAAAAAAATTCTTGCTGACGCTCGTTTCTCTCTCCCATTGATGTGGGATCTGGCAACATTGAGTTTGAAGGGATCCAACTCATCCTCAAATAATTAATTGCTTCCATGGTGGGCCCTCTACAAAGATTTTGGTATCACTTCTACTCTACTTAGTTTACTCAAAAGTAGTGAAATTCTTGATTTGGGTTCACAATTATATAATGATGCATGGGAGCTGCAAAAAGGGCAGCGCCCCACCGCCTTGCGCTGCGTGCAAGGTCAAGCCTGCGTTTTTGCTCCTTATTTCCCTGCCCATCACCCCCATAAATTCTGCAGTGTTCACAAGGTGTTTGGAGCGAGTAATGTCAGCAAATTTCCTCATTTCATTCATTCGAGAAATCACGATGAATAATTGAGCTGTAAACGCAGGAGTTGGGAGAGCAGCAACGGAGCGATGCTGTGAGTTCGATGGTGTACGAGGCTAATGCAAGGATTCGAGATCCGGTTTACGGGTGCGTGGGAACGATAGCGTGTCTGCAGCGCCAAGTGGATGCGTTGCAACAGCAATTGGCCATCACACGAGCCCAGCTACTTCAATTGAAAATGGCCCAATTTTCTTCAGCAAAATCATCATCCGTAGGTAACCTTCTTCTTCCTCCTTTACCCAATATCAATATCAATGTGGGCGCATCCCCATCCTTAGGGTCTAAACCTCTCCCTATCCGAACGCGTTTTAAAAAGTTTTGAGTGGAAATCTAAAAGAAAAAGTCTAGAGAGAACAATATCGACCGGAGGTAAGCTTAAGCTGTTACAAAGATTGGATGTGTTCATGTGAAGCTTGATAAAAATGGATAGTCAAGTTAAACATATTTGACTTGAAGAAAGTCGATGTGAGGTAACTTTTGTAAAGAAAAGTATACAACGAATATGGACAAAAAAGCATGTTATCACGTGTTGTATATTAAAGAATGTTTACGTGACATTTTGAATCCAAATTTCACATCTTGATCTAAGTACTAAGTCTAGGGGTAATAGTATGTGTAATAGCCTAATCCTAGCGCTAGTAGATATTGTTATCTTTAGTCAGTTACGTATCGTCGTCATGCTTTGTTCCTTTCTTCAACCGATATGGGATCTCACAATCCACCCTCCTTGAGGGCTTAGAGTCCTCGTTGGCACACCACTCGGTGTCTGGCTCTGATACCATTTGTAACAGTCTAAGTTCACTGTTAGTAAATATTGTCTGTTTTGGCCCATTACGTATCGTCATCAGCCTCACAGATTTAAAACGTATCTATTGGAGAGAAGTTTCCACACGTTTATAAGGAATGTTTTGTTCACCTCTCTAATCGACGTGGAATCTCATTGAAAAAGATCACGTATCAGCAGCGTCAGGCACTAAGTTTATTTTCATAAAACTAATCAAACACAAAACCATTTGGGGCCCAACCTCATATGCAACAGTGTATTGATGTTGGTGCTGAATATAAATACAATTCAGTAGTAATAATGAGATTGCTGCAGTGAGTGTATGTGGGTGGTGAGAGTGTCAACTTGTTTAGAATGTATATGTATGGGCCTAACCAGCACTGGAGGGGAGAGGGGACTGACCTTTCAACACTATTTGCTTTCAGATTTTGTTTTAGGTCAGAGATGATAGGTAGGGTATCAAACATAAACCCCATTATTACCCCACACACACACCACCAACCCATATAACCCATCACCCCCTTTCGATTGAGTTCACTTTCTAGTCTCTCAGTGCTTTTTTTTACGACTAAAAGAACACTCTTTGTACCTAAACACTTGTCTTTAGCTAAGCTATGTTCGAATTGTTTGAAGAGGAGGAGTACAAAATGAGAATAATAATTTAGCGATGATCATGAAGAAACCAATAGCATCCGATCCCATCAACTACAAACGACAGCCACCTTTTTAAACCATATATTCCCAATCGCTCACTGTTTGATTGAATCATTGGATCAAAGTACACCACAAAATGCTCAACCAAAAGGAATCACATTTTGAGATCTCATTAATTTAAACTAATTAAACATAATCAGATTCCTTCTGTTGGTCTCCTATGCTTCAAAATCCTAGGACGATATAGTTCAATTAATTAATCTAATTTCCTGGTTTTGCTGACCCTTTTGATCTTCTCATCAATTCCATCTCTTCAACTATTGATATATGGTAAATACATCAGGCTCCTCATTTCTTGTTCCCATTCCTCCTCATCCTTTTTCATCTGCAAAAATGATAGAATATTTTATCATAATTGAATTAGAAGCATAATGGGATGTGGGTGGAAGGGGTTTCGTATTGGATTTGACCCACAATCAAAATATGTCGAAGCAAGAGAAAAACTTTGAGGAGAGAAAGCTTTTGGAACAAAGAAACCTTAACCACTTAGCATTTCGAATCTTTTTTTTATACCTGGACACCCAACTCATGGTTGTATACTAATTCATTGTCCATGTGAAGAATACAAGTATCATTCTTTGCTGGATTAGGTTCTTGATCACATGCTTCGTTGTTCCTTGCAAATCTCCCTCGGACTCGAATCCTTCTGTCGGCTAACGTTTTCCGACATGCATACTGTTTTATATAAACGAATGATATATCAATATTGTTGAGAATTATTAGGAGAGAAGTCCCACCTCGACTATTCAAAGGGGTTGATTATGTTGATTTTAACATGGATACCTTTATGGTTTTGGTGAAATTTCTTTGGTTTCTTTTCTTCAAGTAGCGCAGAATCCTTTGTTTTCTTACTTCTTCAGAGTAGCGGCCAACCTTCATGTTCGAGTCCTCAGCCACAGGAACTTCATTGCTTTGGATTTCCTATATCATTAA

mRNA sequence

ATGGAAAATTTACTCAAAAGTAGTGAAATTCTTGATTTGGGTTCACAATTATATAATGATGCATGGGAGCTGCAAAAAGGGCAGCGCCCCACCGCCTTGCGCTGCGTGCAAGGTCAAGCCTGCGTTTTTGCTCCTTATTTCCCTGCCCATCACCCCCATAAATTCTGCAGTGTTCACAAGGAGTTGGGAGAGCAGCAACGGAGCGATGCTGTGAGTTCGATGGTGTACGAGGCTAATGCAAGGATTCGAGATCCGGTCAGAGATGATAGAGTAGCGGCCAACCTTCATGTTCGAGTCCTCAGCCACAGGAACTTCATTGCTTTGGATTTCCTATATCATTAA

Coding sequence (CDS)

ATGGAAAATTTACTCAAAAGTAGTGAAATTCTTGATTTGGGTTCACAATTATATAATGATGCATGGGAGCTGCAAAAAGGGCAGCGCCCCACCGCCTTGCGCTGCGTGCAAGGTCAAGCCTGCGTTTTTGCTCCTTATTTCCCTGCCCATCACCCCCATAAATTCTGCAGTGTTCACAAGGAGTTGGGAGAGCAGCAACGGAGCGATGCTGTGAGTTCGATGGTGTACGAGGCTAATGCAAGGATTCGAGATCCGGTCAGAGATGATAGAGTAGCGGCCAACCTTCATGTTCGAGTCCTCAGCCACAGGAACTTCATTGCTTTGGATTTCCTATATCATTAA

Protein sequence

MENLLKSSEILDLGSQLYNDAWELQKGQRPTALRCVQGQACVFAPYFPAHHPHKFCSVHKELGEQQRSDAVSSMVYEANARIRDPVRDDRVAANLHVRVLSHRNFIALDFLYH

Homology

[Close]

BLAST of Cp4.1LG15g08800 vs. ExPASy Swiss-Prot
Match: Q9SA51 (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 8.2e-12
Identity = 38/65 (58.46%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
          +CV+  +CVFAPYFPA  P+KF  VHK            EL E  RSDAV SMVYEANAR
Sbjct: 24 KCVK-DSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAVDSMVYEANAR 83

[Close]

BLAST of Cp4.1LG15g08800 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.3e-11
Identity = 37/65 (56.92%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
          RC Q   CVF+PYFPA  P KF +VH+            EL   QR DAVSSMVYEANAR
Sbjct: 23 RCAQD--CVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSMVYEANAR 82

[Close]

BLAST of Cp4.1LG15g08800 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 2.0e-10
Identity = 34/65 (52.31%), Postives = 40/65 (61.54%), Query Frame = 0


Query: 34  RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
           RC   Q C F+PYF  H PHKF SVHK            E+ E QR+DA +S+VYEAN R
Sbjct: 55  RC--AQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVR 114

[Close]

BLAST of Cp4.1LG15g08800 vs. ExPASy Swiss-Prot
Match: Q9AT61 (LOB domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=LBD13 PE=1 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 2.6e-10
Identity = 32/65 (49.23%), Postives = 40/65 (61.54%), Query Frame = 0


Query: 34  RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
           RC   + C F+PYF  H PHKF +VHK            E+GE QR DA +S+VYEAN R
Sbjct: 62  RC--AEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLR 121

[Close]

BLAST of Cp4.1LG15g08800 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 4.5e-10
Identity = 34/65 (52.31%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
          RC +   C+FAPYFP   PHKF  VHK            EL   QR+DAV+S+V+EANAR
Sbjct: 18 RCAKD--CIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSLVFEANAR 77

[Close]

BLAST of Cp4.1LG15g08800 vs. NCBI nr
Match: KAG7012059.1 (LOB domain-containing protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 93.6 bits (231), Expect = 6.75e-22
Identity = 49/65 (75.38%), Postives = 49/65 (75.38%), Query Frame = 0


Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 86
          RC  GQ CVFAPYFPAHHPHKFCSVHK            ELGEQQ SDAVSSMVYEANAR
Sbjct: 16 RC--GQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANAR 75

[Close]

BLAST of Cp4.1LG15g08800 vs. NCBI nr
Match: KAG6572459.1 (LOB domain-containing protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 93.6 bits (231), Expect = 2.00e-21
Identity = 49/65 (75.38%), Postives = 49/65 (75.38%), Query Frame = 0


Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 86
          RC  GQ CVFAPYFPAHHPHKFCSVHK            ELGEQQ SDAVSSMVYEANAR
Sbjct: 24 RC--GQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANAR 83

[Close]

BLAST of Cp4.1LG15g08800 vs. NCBI nr
Match: XP_008447124.1 (PREDICTED: LOB domain-containing protein 4-like [Cucumis melo] >KAA0051088.1 LOB domain-containing protein 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 82.0 bits (201), Expect = 6.13e-17
Identity = 43/58 (74.14%), Postives = 43/58 (74.14%), Query Frame = 0


Query: 41 CVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANARIRDPV 86
          CVFAPYFPA HPHKF SVHK            EL EQQRSDAVSSMVYEANARIRDPV
Sbjct: 36 CVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPV 93

[Close]

BLAST of Cp4.1LG15g08800 vs. NCBI nr
Match: XP_004139827.1 (LOB domain-containing protein 4 [Cucumis sativus] >KGN44269.1 hypothetical protein Csa_015717 [Cucumis sativus])

HSP 1 Score: 82.0 bits (201), Expect = 6.42e-17
Identity = 43/58 (74.14%), Postives = 43/58 (74.14%), Query Frame = 0


Query: 41 CVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANARIRDPV 86
          CVFAPYFPA HPHKF SVHK            EL EQQRSDAVSSMVYEANARIRDPV
Sbjct: 38 CVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPV 95

[Close]

BLAST of Cp4.1LG15g08800 vs. NCBI nr
Match: XP_004294159.1 (PREDICTED: LOB domain-containing protein 4 [Fragaria vesca subsp. vesca])

HSP 1 Score: 81.6 bits (200), Expect = 1.28e-16
Identity = 48/78 (61.54%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 25 QKGQRPTA----LRCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRS 84
          Q G  P A    LR    Q CVFAPYFPA  PHKF SVHK            EL EQQRS
Sbjct: 9  QGGMSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRS 68

Query: 85 DAVSSMVYEANARIRDPV 86
          DAVSSMVYEANAR+RDPV
Sbjct: 69 DAVSSMVYEANARVRDPV 86

[Close]

BLAST of Cp4.1LG15g08800 vs. ExPASy TrEMBL
Match: A0A803P7S0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.53e-20
Identity = 43/53 (81.13%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHKELGEQQRSDAVSSMVYEANARIRDPV 86
          RC Q   CVFAPYFPA  PHKF SVHKEL E+QRSDAVSSMVYEANAR+RDPV
Sbjct: 13 RCAQD--CVFAPYFPADEPHKFASVHKELPEEQRSDAVSSMVYEANARVRDPV 63

[Close]

BLAST of Cp4.1LG15g08800 vs. ExPASy TrEMBL
Match: A0A5A7U720 (LOB domain-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold511G00280 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.97e-17
Identity = 43/58 (74.14%), Postives = 43/58 (74.14%), Query Frame = 0


Query: 41 CVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANARIRDPV 86
          CVFAPYFPA HPHKF SVHK            EL EQQRSDAVSSMVYEANARIRDPV
Sbjct: 36 CVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPV 93

[Close]

BLAST of Cp4.1LG15g08800 vs. ExPASy TrEMBL
Match: A0A1S3BGP4 (LOB domain-containing protein 4-like OS=Cucumis melo OX=3656 GN=LOC103489649 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.97e-17
Identity = 43/58 (74.14%), Postives = 43/58 (74.14%), Query Frame = 0


Query: 41 CVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANARIRDPV 86
          CVFAPYFPA HPHKF SVHK            EL EQQRSDAVSSMVYEANARIRDPV
Sbjct: 36 CVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPV 93

[Close]

BLAST of Cp4.1LG15g08800 vs. ExPASy TrEMBL
Match: A0A0A0K5P4 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G237840 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.11e-17
Identity = 43/58 (74.14%), Postives = 43/58 (74.14%), Query Frame = 0


Query: 41 CVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANARIRDPV 86
          CVFAPYFPA HPHKF SVHK            EL EQQRSDAVSSMVYEANARIRDPV
Sbjct: 38 CVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPV 95

[Close]

BLAST of Cp4.1LG15g08800 vs. ExPASy TrEMBL
Match: A0A1R3H6G6 (LOB domain-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_30929 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 8.16e-17
Identity = 39/53 (73.58%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHKELGEQQRSDAVSSMVYEANARIRDPV 86
          RC +G  CVFAPYFPA  P KF +VHKEL   QR DAVSSMVYEANAR+RDPV
Sbjct: 23 RCAEG--CVFAPYFPADEPQKFANVHKELPVHQRGDAVSSMVYEANARVRDPV 73

[Close]

BLAST of Cp4.1LG15g08800 vs. TAIR 10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9 )

HSP 1 Score: 71.2 bits (173), Expect = 5.8e-13
Identity = 38/65 (58.46%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
          +CV+  +CVFAPYFPA  P+KF  VHK            EL E  RSDAV SMVYEANAR
Sbjct: 24 KCVK-DSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAVDSMVYEANAR 83

[Close]

BLAST of Cp4.1LG15g08800 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 68.6 bits (166), Expect = 3.8e-12
Identity = 37/65 (56.92%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
          RC Q   CVF+PYFPA  P KF +VH+            EL   QR DAVSSMVYEANAR
Sbjct: 23 RCAQD--CVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSMVYEANAR 82

[Close]

BLAST of Cp4.1LG15g08800 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 66.6 bits (161), Expect = 1.4e-11
Identity = 34/65 (52.31%), Postives = 40/65 (61.54%), Query Frame = 0


Query: 34  RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
           RC   Q C F+PYF  H PHKF SVHK            E+ E QR+DA +S+VYEAN R
Sbjct: 55  RC--AQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVR 114

[Close]

BLAST of Cp4.1LG15g08800 vs. TAIR 10
Match: AT2G30340.1 (LOB domain-containing protein 13 )

HSP 1 Score: 66.2 bits (160), Expect = 1.9e-11
Identity = 32/65 (49.23%), Postives = 40/65 (61.54%), Query Frame = 0


Query: 34  RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
           RC   + C F+PYF  H PHKF +VHK            E+GE QR DA +S+VYEAN R
Sbjct: 62  RC--AEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLR 121

[Close]

BLAST of Cp4.1LG15g08800 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 65.5 bits (158), Expect = 3.2e-11
Identity = 34/65 (52.31%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
          RC +   C+FAPYFP   PHKF  VHK            EL   QR+DAV+S+V+EANAR
Sbjct: 18 RCAKD--CIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSLVFEANAR 77

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g08800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA51	8.2e-12	58.46	LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=...	[more]
Q9SHE9	5.3e-11	56.92	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8L5T5	2.0e-10	52.31	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]
Q9AT61	2.6e-10	49.23	LOB domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=LBD13 PE=1 S...	[more]
Q8LBW3	4.5e-10	52.31	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]

BLAST of Cp4.1LG15g08800 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012059.1	6.75e-22	75.38	LOB domain-containing protein 3, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
KAG6572459.1	2.00e-21	75.38	LOB domain-containing protein 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_008447124.1	6.13e-17	74.14	PREDICTED: LOB domain-containing protein 4-like [Cucumis melo] >KAA0051088.1 LOB...	[more]
XP_004139827.1	6.42e-17	74.14	LOB domain-containing protein 4 [Cucumis sativus] >KGN44269.1 hypothetical prote...	[more]
XP_004294159.1	1.28e-16	61.54	PREDICTED: LOB domain-containing protein 4 [Fragaria vesca subsp. vesca]	[more]

BLAST of Cp4.1LG15g08800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A803P7S0	1.53e-20	81.13	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A5A7U720	2.97e-17	74.14	LOB domain-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BGP4	2.97e-17	74.14	LOB domain-containing protein 4-like OS=Cucumis melo OX=3656 GN=LOC103489649 PE=...	[more]
A0A0A0K5P4	3.11e-17	74.14	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G237840 PE=3 SV...	[more]
A0A1R3H6G6	8.16e-17	73.58	LOB domain-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_30929 PE=...	[more]

BLAST of Cp4.1LG15g08800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16530.1	5.8e-13	58.46	ASYMMETRIC LEAVES 2-like 9	[more]
AT1G31320.1	3.8e-12	56.92	LOB domain-containing protein 4	[more]
AT2G40470.1	1.4e-11	52.31	LOB domain-containing protein 15	[more]
AT2G30340.1	1.9e-11	49.23	LOB domain-containing protein 13	[more]
AT2G30130.1	3.2e-11	52.31	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 34..88 e-value: 1.1E-8 score: 35.6
None	No IPR available	PANTHER	PTHR31301:SF58	LOB DOMAIN-CONTAINING PROTEIN 3	coord: 34..87
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 34..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g08800.1	Cp4.1LG15g08800.1	mRNA