Cp4.1LG15g07580 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g07580
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	B box-type domain-containing protein
Location	Cp4.1LG15: 7810367 .. 7810774 (-)
RNA-Seq Expression	Cp4.1LG15g07580
Synteny	Cp4.1LG15g07580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCAAAGGAGTAGGACAGGAAGATACCCAAGCCACCGTCCAGCGGCGGCGGACTACCGAGATGGCAAGGGCGAAGGGCGGTGGAGGCGATCCAGAACCGTGCGAGCTCTGCGGTTCGAGGGCGTCGCTGTATTGCCAAGCGGACGAGGCGTATCTGTGCCAAAAGTGCGACAAAATGGTTCATAGCGCGAATTTCTTGGCGCTGCGACACGTACGGTGCCTGCTGTGCAACACGTGCCAGAGGGCGACGCGGAGGTATGTGTTGGGAGCGTCGATGGAGGTTGTGCTTCCGAGTATTGTGAGCAGTTCATCGATGGAGAGGAATTTCCAAAATTACCACTGTGGTTCAGATGATTATGATCAAAATTCCTCCCAACTTCTGAAAACTCCTTGTCTCTTTCTTTAA

mRNA sequence

ATGTGCAAAGGAGTAGGACAGGAAGATACCCAAGCCACCGTCCAGCGGCGGCGGACTACCGAGATGGCAAGGGCGAAGGGCGGTGGAGGCGATCCAGAACCGTGCGAGCTCTGCGGTTCGAGGGCGTCGCTGTATTGCCAAGCGGACGAGGCGTATCTGTGCCAAAAGTGCGACAAAATGGTTCATAGCGCGAATTTCTTGGCGCTGCGACACGTACGGTGCCTGCTGTGCAACACGTGCCAGAGGGCGACGCGGAGGTATGTGTTGGGAGCGTCGATGGAGGTTGTGCTTCCGAGTATTGTGAGCAGTTCATCGATGGAGAGGAATTTCCAAAATTACCACTGTGGTTCAGATGATTATGATCAAAATTCCTCCCAACTTCTGAAAACTCCTTGTCTCTTTCTTTAA

Coding sequence (CDS)

ATGTGCAAAGGAGTAGGACAGGAAGATACCCAAGCCACCGTCCAGCGGCGGCGGACTACCGAGATGGCAAGGGCGAAGGGCGGTGGAGGCGATCCAGAACCGTGCGAGCTCTGCGGTTCGAGGGCGTCGCTGTATTGCCAAGCGGACGAGGCGTATCTGTGCCAAAAGTGCGACAAAATGGTTCATAGCGCGAATTTCTTGGCGCTGCGACACGTACGGTGCCTGCTGTGCAACACGTGCCAGAGGGCGACGCGGAGGTATGTGTTGGGAGCGTCGATGGAGGTTGTGCTTCCGAGTATTGTGAGCAGTTCATCGATGGAGAGGAATTTCCAAAATTACCACTGTGGTTCAGATGATTATGATCAAAATTCCTCCCAACTTCTGAAAACTCCTTGTCTCTTTCTTTAA

Protein sequence

MCKGVGQEDTQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYVLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYDQNSSQLLKTPCLFL

Homology

[Close]

BLAST of Cp4.1LG15g07580 vs. ExPASy Swiss-Prot
Match: Q1G3I2 (B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.5e-20
Identity = 49/116 (42.24%), Postives = 75/116 (64.66%), Query Frame = 0


Query: 1   MCKGVGQEDTQATVQ---RRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKC 60
           MC+G  +E+ + +     +R  TE  +A      P  CELCG  A++YC+AD A+LC+KC
Sbjct: 1   MCRGFEKEEERRSDNGGCQRLCTESHKA------PVSCELCGENATVYCEADAAFLCRKC 60

Query: 61  DKMVHSANFLALRHVRCLLCNTCQRATRRYVLGASMEVVLPSIVSSSSMERNFQNY 114
           D+ VHSANFLA RH+R ++C TC++ TRR ++G +  VVLP I   + +E +  ++
Sbjct: 61  DRWVHSANFLARRHLRRVICTTCRKLTRRCLVGDNFNVVLPEIRMIARIEEHSSDH 110

[Close]

BLAST of Cp4.1LG15g07580 vs. ExPASy Swiss-Prot
Match: Q9LRM4 (B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.2e-17
Identity = 53/126 (42.06%), Postives = 76/126 (60.32%), Query Frame = 0


Query: 1   MCKGVGQEDTQATVQRRRTTEMARAKGGG--------GDPEPCELCGSRASLYCQADEAY 60
           MC+G+  E+++            R+ GGG          P  CELC   AS++C+AD A+
Sbjct: 1   MCRGLNNEESR------------RSDGGGCRSLCTRPSVPVRCELCDGDASVFCEADSAF 60

Query: 61  LCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYVLG-ASMEVVLPSI--VSSSSME-R 115
           LC+KCD+ VH ANFLA RHVR +LC +CQ+ TRR ++G     VVLPS+  V  +++E R
Sbjct: 61  LCRKCDRWVHGANFLAWRHVRRVLCTSCQKLTRRCLVGDHDFHVVLPSVTTVGETTVENR 114

[Close]

BLAST of Cp4.1LG15g07580 vs. ExPASy Swiss-Prot
Match: Q9LJB7 (B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-10
Identity = 27/56 (48.21%), Postives = 38/56 (67.86%), Query Frame = 0


Query: 35 CELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYVLG 91
          CELCG+ A L+C AD A+LC+ CD   H++NFL  RH R ++C  C+  T+ +V G
Sbjct: 5  CELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSG 60

[Close]

BLAST of Cp4.1LG15g07580 vs. ExPASy Swiss-Prot
Match: Q39057 (Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-09
Identity = 30/66 (45.45%), Postives = 39/66 (59.09%), Query Frame = 0


Query: 27 GGGGDPEPCELCGSRA-SLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATR 86
          G      PC+ C S A ++YC AD AYLC  CD  VHSAN +A RH R  +C +C+RA  
Sbjct: 12 GENNRARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPA 71

Query: 87 RYVLGA 92
           ++  A
Sbjct: 72 AFLCEA 77

[Close]

BLAST of Cp4.1LG15g07580 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-08
Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 0


Query: 33 EPCELCGSRA-SLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRA 84
          + C+ C S A ++YC+AD AYLC  CD  VH+AN LA RH R  +C +C+RA
Sbjct: 10 QACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERA 61

[Close]

BLAST of Cp4.1LG15g07580 vs. NCBI nr
Match: XP_023511647.1 (B-box domain protein 30-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283 bits (724), Expect = 2.15e-96
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MCKGVGQEDTQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKM 60
           MCKGVGQEDTQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKM
Sbjct: 1   MCKGVGQEDTQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKM 60

Query: 61  VHSANFLALRHVRCLLCNTCQRATRRYVLGASMEVVLPSIVSSSSMERNFQNYHCGSDDY 120
           VHSANFLALRHVRCLLCNTCQRATRRYVLGASMEVVLPSIVSSSSMERNFQNYHCGSDDY
Sbjct: 61  VHSANFLALRHVRCLLCNTCQRATRRYVLGASMEVVLPSIVSSSSMERNFQNYHCGSDDY 120

Query: 121 DQNSSQLLKTPCLFL 135
           DQNSSQLLKTPCLFL
Sbjct: 121 DQNSSQLLKTPCLFL 135

[Close]

BLAST of Cp4.1LG15g07580 vs. NCBI nr
Match: KAG6572307.1 (B-box domain protein 30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011919.1 B-box domain protein 30, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 276 bits (707), Expect = 8.41e-94
Identity = 131/135 (97.04%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MCKGVGQEDTQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKM 60
           MCKGVGQE+TQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKM
Sbjct: 1   MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKM 60

Query: 61  VHSANFLALRHVRCLLCNTCQRATRRYVLGASMEVVLPSIVSSSSMERNFQNYHCGSDDY 120
           VHSANFLALRHVRCLLCNTCQRATRRY+LGASMEVVLPSIVSSS MERNFQNYHCGSDDY
Sbjct: 61  VHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSLMERNFQNYHCGSDDY 120

Query: 121 DQNSSQLLKTPCLFL 135
           DQNSSQLL+TPCLFL
Sbjct: 121 DQNSSQLLQTPCLFL 135

[Close]

BLAST of Cp4.1LG15g07580 vs. NCBI nr
Match: XP_022953004.1 (B-box domain protein 30 [Cucurbita moschata])

HSP 1 Score: 238 bits (608), Expect = 5.28e-79
Identity = 112/114 (98.25%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 22  MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQ 81
           MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQ
Sbjct: 1   MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQ 60

Query: 82  RATRRYVLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYDQNSSQLLKTPCLFL 135
           RATRRY+LGASMEVVLPSIVSSSSMERNFQNYHCGSDDYDQNSSQLL+TPCLFL
Sbjct: 61  RATRRYLLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYDQNSSQLLQTPCLFL 114

[Close]

BLAST of Cp4.1LG15g07580 vs. NCBI nr
Match: XP_022968882.1 (B-box domain protein 30 [Cucurbita maxima])

HSP 1 Score: 213 bits (542), Expect = 5.57e-69
Identity = 105/114 (92.11%), Postives = 107/114 (93.86%), Query Frame = 0


Query: 22  MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQ 81
           MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQ
Sbjct: 1   MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQ 60

Query: 82  RATRRYVLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYDQNSSQLLKTPCLFL 135
           R TRRY+LGASMEVVLPSIVSSSSM+RNFQN    SD YDQNSSQLLKT CLFL
Sbjct: 61  RQTRRYLLGASMEVVLPSIVSSSSMDRNFQN---DSDGYDQNSSQLLKTLCLFL 111

[Close]

BLAST of Cp4.1LG15g07580 vs. NCBI nr
Match: XP_008455408.1 (PREDICTED: B-box zinc finger protein 21 [Cucumis melo] >KAA0040260.1 B-box zinc finger protein 21 [Cucumis melo var. makuwa] >TYK07088.1 B-box zinc finger protein 21 [Cucumis melo var. makuwa])

HSP 1 Score: 199 bits (506), Expect = 3.17e-63
Identity = 99/135 (73.33%), Postives = 112/135 (82.96%), Query Frame = 0


Query: 1   MCKGVGQEDTQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKM 60
           MCKGV QE+T+A V++R TT+   A+GG  DP  CELCGSRASLYC+ADEAYLC KCDK 
Sbjct: 1   MCKGVEQEETKAPVRQRLTTDDRAARGG--DPVRCELCGSRASLYCEADEAYLCGKCDKS 60

Query: 61  VHSANFLALRHVRCLLCNTCQRATRRYVLGASMEVVLPSIVSSSSMERNFQNYHCGSDDY 120
           VH+ANFLALRHVRCLLCNTCQ  T+RY+LGASMEVV+PSIVS    ERNF NYHC SD +
Sbjct: 61  VHNANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVVPSIVSR---ERNFLNYHCDSDGF 120

Query: 121 DQNSSQLLKTPCLFL 135
            QN SQ+LKTPCLFL
Sbjct: 121 VQNCSQVLKTPCLFL 130

[Close]

BLAST of Cp4.1LG15g07580 vs. ExPASy TrEMBL
Match: A0A6J1GNE7 (B-box domain protein 30 OS=Cucurbita moschata OX=3662 GN=LOC111455519 PE=4 SV=1)

HSP 1 Score: 238 bits (608), Expect = 2.56e-79
Identity = 112/114 (98.25%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 22  MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQ 81
           MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQ
Sbjct: 1   MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQ 60

Query: 82  RATRRYVLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYDQNSSQLLKTPCLFL 135
           RATRRY+LGASMEVVLPSIVSSSSMERNFQNYHCGSDDYDQNSSQLL+TPCLFL
Sbjct: 61  RATRRYLLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYDQNSSQLLQTPCLFL 114

[Close]

BLAST of Cp4.1LG15g07580 vs. ExPASy TrEMBL
Match: A0A6J1HUR8 (B-box domain protein 30 OS=Cucurbita maxima OX=3661 GN=LOC111468064 PE=4 SV=1)

HSP 1 Score: 213 bits (542), Expect = 2.70e-69
Identity = 105/114 (92.11%), Postives = 107/114 (93.86%), Query Frame = 0


Query: 22  MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQ 81
           MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQ
Sbjct: 1   MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQ 60

Query: 82  RATRRYVLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYDQNSSQLLKTPCLFL 135
           R TRRY+LGASMEVVLPSIVSSSSM+RNFQN    SD YDQNSSQLLKT CLFL
Sbjct: 61  RQTRRYLLGASMEVVLPSIVSSSSMDRNFQN---DSDGYDQNSSQLLKTLCLFL 111

[Close]

BLAST of Cp4.1LG15g07580 vs. ExPASy TrEMBL
Match: A0A5A7TAC0 (B-box zinc finger protein 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004060 PE=4 SV=1)

HSP 1 Score: 199 bits (506), Expect = 1.53e-63
Identity = 99/135 (73.33%), Postives = 112/135 (82.96%), Query Frame = 0


Query: 1   MCKGVGQEDTQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKM 60
           MCKGV QE+T+A V++R TT+   A+GG  DP  CELCGSRASLYC+ADEAYLC KCDK 
Sbjct: 1   MCKGVEQEETKAPVRQRLTTDDRAARGG--DPVRCELCGSRASLYCEADEAYLCGKCDKS 60

Query: 61  VHSANFLALRHVRCLLCNTCQRATRRYVLGASMEVVLPSIVSSSSMERNFQNYHCGSDDY 120
           VH+ANFLALRHVRCLLCNTCQ  T+RY+LGASMEVV+PSIVS    ERNF NYHC SD +
Sbjct: 61  VHNANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVVPSIVSR---ERNFLNYHCDSDGF 120

Query: 121 DQNSSQLLKTPCLFL 135
            QN SQ+LKTPCLFL
Sbjct: 121 VQNCSQVLKTPCLFL 130

[Close]

BLAST of Cp4.1LG15g07580 vs. ExPASy TrEMBL
Match: A0A1S3C0U6 (B-box zinc finger protein 21 OS=Cucumis melo OX=3656 GN=LOC103495577 PE=4 SV=1)

HSP 1 Score: 199 bits (506), Expect = 1.53e-63
Identity = 99/135 (73.33%), Postives = 112/135 (82.96%), Query Frame = 0


Query: 1   MCKGVGQEDTQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKM 60
           MCKGV QE+T+A V++R TT+   A+GG  DP  CELCGSRASLYC+ADEAYLC KCDK 
Sbjct: 1   MCKGVEQEETKAPVRQRLTTDDRAARGG--DPVRCELCGSRASLYCEADEAYLCGKCDKS 60

Query: 61  VHSANFLALRHVRCLLCNTCQRATRRYVLGASMEVVLPSIVSSSSMERNFQNYHCGSDDY 120
           VH+ANFLALRHVRCLLCNTCQ  T+RY+LGASMEVV+PSIVS    ERNF NYHC SD +
Sbjct: 61  VHNANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVVPSIVSR---ERNFLNYHCDSDGF 120

Query: 121 DQNSSQLLKTPCLFL 135
            QN SQ+LKTPCLFL
Sbjct: 121 VQNCSQVLKTPCLFL 130

[Close]

BLAST of Cp4.1LG15g07580 vs. ExPASy TrEMBL
Match: A0A0A0K6V9 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044810 PE=4 SV=1)

HSP 1 Score: 197 bits (502), Expect = 6.66e-63
Identity = 101/136 (74.26%), Postives = 110/136 (80.88%), Query Frame = 0


Query: 1   MCKGVGQEDT-QATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDK 60
           MCKGV QE+T Q  V++RRTT+   A  GGGDP  CELCGSRASLYC+ADEAYLC KCDK
Sbjct: 1   MCKGVEQEETTQVAVRQRRTTDDGAA--GGGDPVRCELCGSRASLYCEADEAYLCGKCDK 60

Query: 61  MVHSANFLALRHVRCLLCNTCQRATRRYVLGASMEVVLPSIVSSSSMERNFQNYHCGSDD 120
            VHSANFLALRHVRCLLCNTCQ  T+RY+LGASMEVVLP   S  S ERNF NYHC SD 
Sbjct: 61  SVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPP--SLVSRERNFLNYHCDSDS 120

Query: 121 YDQNSSQLLKTPCLFL 135
           + QN SQ+LKTPCLFL
Sbjct: 121 FVQNCSQVLKTPCLFL 132

[Close]

BLAST of Cp4.1LG15g07580 vs. TAIR 10
Match: AT4G15248.1 (B-box type zinc finger family protein )

HSP 1 Score: 98.2 bits (243), Expect = 5.3e-21
Identity = 49/116 (42.24%), Postives = 75/116 (64.66%), Query Frame = 0


Query: 1   MCKGVGQEDTQATVQ---RRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKC 60
           MC+G  +E+ + +     +R  TE  +A      P  CELCG  A++YC+AD A+LC+KC
Sbjct: 1   MCRGFEKEEERRSDNGGCQRLCTESHKA------PVSCELCGENATVYCEADAAFLCRKC 60

Query: 61  DKMVHSANFLALRHVRCLLCNTCQRATRRYVLGASMEVVLPSIVSSSSMERNFQNY 114
           D+ VHSANFLA RH+R ++C TC++ TRR ++G +  VVLP I   + +E +  ++
Sbjct: 61  DRWVHSANFLARRHLRRVICTTCRKLTRRCLVGDNFNVVLPEIRMIARIEEHSSDH 110

[Close]

BLAST of Cp4.1LG15g07580 vs. TAIR 10
Match: AT3G21890.1 (B-box type zinc finger family protein )

HSP 1 Score: 90.9 bits (224), Expect = 8.5e-19
Identity = 53/126 (42.06%), Postives = 76/126 (60.32%), Query Frame = 0


Query: 1   MCKGVGQEDTQATVQRRRTTEMARAKGGG--------GDPEPCELCGSRASLYCQADEAY 60
           MC+G+  E+++            R+ GGG          P  CELC   AS++C+AD A+
Sbjct: 1   MCRGLNNEESR------------RSDGGGCRSLCTRPSVPVRCELCDGDASVFCEADSAF 60

Query: 61  LCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYVLG-ASMEVVLPSI--VSSSSME-R 115
           LC+KCD+ VH ANFLA RHVR +LC +CQ+ TRR ++G     VVLPS+  V  +++E R
Sbjct: 61  LCRKCDRWVHGANFLAWRHVRRVLCTSCQKLTRRCLVGDHDFHVVLPSVTTVGETTVENR 114

[Close]

BLAST of Cp4.1LG15g07580 vs. TAIR 10
Match: AT5G54470.1 (B-box type zinc finger family protein )

HSP 1 Score: 68.9 bits (167), Expect = 3.5e-12
Identity = 36/92 (39.13%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 35  CELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYVLGASME 94
           CELC   A +YC++D+A LC  CD  VH ANFL  +H+RCLLC+ CQ  T     G ++ 
Sbjct: 6   CELCCGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKASGLNLG 65

Query: 95  VVLPSIVSSSSMERNFQNYHCGSDDYDQNSSQ 127
             +    S  + ++N  +   G    DQN +Q
Sbjct: 66  PTVSICESCLARKKNNNSSLAGR---DQNLNQ 94

[Close]

BLAST of Cp4.1LG15g07580 vs. TAIR 10
Match: AT3G21150.1 (B-box 32 )

HSP 1 Score: 67.8 bits (164), Expect = 7.7e-12
Identity = 27/56 (48.21%), Postives = 38/56 (67.86%), Query Frame = 0


Query: 35 CELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYVLG 91
          CELCG+ A L+C AD A+LC+ CD   H++NFL  RH R ++C  C+  T+ +V G
Sbjct: 5  CELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSG 60

[Close]

BLAST of Cp4.1LG15g07580 vs. TAIR 10
Match: AT4G27310.1 (B-box type zinc finger family protein )

HSP 1 Score: 67.8 bits (164), Expect = 7.7e-12
Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 35 CELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRAT 85
          C+LC   A +YC++D+A LC  CD  VH ANFL  +H RCLLC+ CQ  T
Sbjct: 5  CDLCNGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLT 54

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g07580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3I2	7.5e-20	42.24	B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1	[more]
Q9LRM4	1.2e-17	42.06	B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1	[more]
Q9LJB7	1.1e-10	48.21	B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1	[more]
Q39057	1.6e-09	45.45	Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1	[more]
O50055	1.0e-08	51.92	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1...	[more]

BLAST of Cp4.1LG15g07580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023511647.1	2.15e-96	100.00	B-box domain protein 30-like [Cucurbita pepo subsp. pepo]	[more]
KAG6572307.1	8.41e-94	97.04	B-box domain protein 30, partial [Cucurbita argyrosperma subsp. sororia] >KAG701...	[more]
XP_022953004.1	5.28e-79	98.25	B-box domain protein 30 [Cucurbita moschata]	[more]
XP_022968882.1	5.57e-69	92.11	B-box domain protein 30 [Cucurbita maxima]	[more]
XP_008455408.1	3.17e-63	73.33	PREDICTED: B-box zinc finger protein 21 [Cucumis melo] >KAA0040260.1 B-box zinc ...	[more]

BLAST of Cp4.1LG15g07580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GNE7	2.56e-79	98.25	B-box domain protein 30 OS=Cucurbita moschata OX=3662 GN=LOC111455519 PE=4 SV=1	[more]
A0A6J1HUR8	2.70e-69	92.11	B-box domain protein 30 OS=Cucurbita maxima OX=3661 GN=LOC111468064 PE=4 SV=1	[more]
A0A5A7TAC0	1.53e-63	73.33	B-box zinc finger protein 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C0U6	1.53e-63	73.33	B-box zinc finger protein 21 OS=Cucumis melo OX=3656 GN=LOC103495577 PE=4 SV=1	[more]
A0A0A0K6V9	6.66e-63	74.26	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044810 ...	[more]

BLAST of Cp4.1LG15g07580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15248.1	5.3e-21	42.24	B-box type zinc finger family protein	[more]
AT3G21890.1	8.5e-19	42.06	B-box type zinc finger family protein	[more]
AT5G54470.1	3.5e-12	39.13	B-box type zinc finger family protein	[more]
AT3G21150.1	7.7e-12	48.21	B-box 32	[more]
AT4G27310.1	7.7e-12	54.00	B-box type zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 30..76 e-value: 2.9E-8 score: 43.4
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 34..72 e-value: 1.9E-6 score: 27.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR31717:SF100	B-BOX ZINC FINGER PROTEIN 29	coord: 35..108
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 35..108
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 34..76 e-value: 3.39801E-15 score: 63.0855

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g07580.1	Cp4.1LG15g07580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding