Cp4.1LG15g07190 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g07190
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	glucosidase 2 subunit beta
Location	Cp4.1LG15: 7661579 .. 7664175 (+)
RNA-Seq Expression	Cp4.1LG15g07190
Synteny	Cp4.1LG15g07190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTTTTTTTTTTCTAAAGAAAATTACATAAAATATAATTTAGGTAGTGAATAGTAAGGATGAAGAGGAACTGCGCTCAGTTAGTGAAGTCTCCGAACTTTTGATCAATTTCAGCTCCTCCGATTGCCCTGAAGCTTATGATTTCGTTACCGCAGGCAAAATTTTGACAGAAATGGAAGCAGGTCATTCTCCAAAGTCCATGAGCTTCGTTTTGCTGCTTTCATTCTGTTTCTTCTTCGCTTCTGTTCGCTCTGTTCCATCACTTATCGGAGTGCACCCCCTTGGTAATCTTATCTTCTCTCTTTCTTTCTTTGACTGTGTGCTTGATCGTCTCACTGGATCTGGTTCTGCGAAGCTTAAAATTGAAATTTCTAGTGCTATTTCGCCCCTCATCCATCTAACTGCCCCTTTTGGGGTGTACCCATATTGTCAATTGATGTTAAATTGGTGCCCATTCGGTAAAATTTTCTGAATTGAAATGTGTATTCGATTGCAGATGAGAAATATTATTCATCGGAGGTCATAAAATGCAAGGATGGGTCTCGATCTTTTACTATTGATCGTCTCAACGACGATTTCTGTGACTGCGTTGATGGGACCGATGAGCCTGGTGCTTTCTTAGTTCTTACTGGATTTTAATAATTAATGTTATGCCTTTCTAAGGATTTCGGATGCATAATTTGTTTCGAACATCTAATATCGATTTTCGAGTGGTCGAATTGATTGAGAAGTTCTGGTTTGTGGAATGGAGAAGAAAATTTCTTACTGAAGAACTTCAATTTGAAATGGCTGTTGAAATTAGGCATTTAACTAAGGCAACAATTAATAGCCATTGTAATCTGTCTTAAATGGGAACTTGGTAAAGTTTAATGTTCTATTGCATAAACTATTGAAAAAGACCTACCATGATTATCTTAGAAGATCATGACTTGTTTTTCTTTCTGAATTTTCACCGGCATTTTGAGAATTGGAATGTTGATACCATATCTATTTTTTCCTGTATCATTAGAAAGTAGGATAGGTTCTGCATTAGAATGATACTGAACTTATAAGCAATAAATCCGAATTCCGGGATGGCCAATTGGTCATGTGAACAAAAGGAAAACAAACCTTCCCCAATAGGCAAGAAGAGACCACACACACACAAATACAGTGCAAGGATCAACCAATTATCTCATGGATTTGACCTTTGCAGGAACTTCTGCCTGTGCAAGAGGGAAGTTCTATTGCAGGAACATGGGAAGTACGCCACGGTTCCTATTTTCTTCCCGCGTCAACGATCATATTTGTGGTAACTATCTCTGAAATCTTTTGTTTTTCTTCTTCTTTTATGCATGTGATTCTATTGAAGTTTGGTCAAAAGAAGACAGGTGAGTCAATGAAACACCACAAATTTGTTGATGTAGATTTTAGTACAACCTTCCTGTGATGGTATGTGTAATGCAATGAGTACAAGTCATGTGCTAATTGTGCTGATTATTTGTTCTTCCTGCTTTATGTTTAGACAATTTGAGGTCTCTATTCTGTGTAAAGTCTGCAAACAGTGGTTGAACCTTTAAAATCAGCATTTTCCAGACCAAAACTTTACAGACCATTTTGTTCCATGTGCAAAGTTTCATTTCATCTTTGAATTAAATTCTAGTTCCCTTTTCAATATATAATTGTAGATTGCTGTGATGGAAGTGATGAATATGATGGTAATATCTTTTGCCCGAACACGTGTGTCATGGGGGGAAATGCAGCGTACAAGAACAGTTATTATATTTCGACTTCTCGAGATGTGGATGTAATCAACAGAAAAGTAAAGGAGGAAATCACCAAGGAGGACTTGTTCCATAGGCTAATTGGTAGGATTTTTGTAATTACGAAACAGATTTTGAAGTACTCGACTGATTGTTGCAACTTATAATTCCAGGTTTGAAGCTAGTAATAATCCTACAGGTAGCTCTCACATGTTTTGCAGTCCTCATTTGGGCAAACCGATGTCAAGCGAAATCTAAGAGAAGACGACACCGCTGAAGCAAGCGTGGCTATCGTCATTCTGCTCTGCTTTAATCCTAAGTACGTCTCCCATTAGAGCATATGGCTTAGTGTTCAATATCCATTAGGTCTCCTGGCGTCTGTTATGAGCATGATTTCATGATCTTGTTTCTTTCAGGTACTCACAAACCTCAACCCGCTGGATAAAGAACTCCTGCTCTACCTTCACCCTTCACCGCAGAGCCATGGTCCATTGGTTGGCTAGGGCTAAGCTATATCATATATAAAGATCCATCTTAAGCCAACTTAGCCATAACCTAAACATCCTGCTTATCCATCACAGCAGCACAATAACACAAAGGATTAGCAACTCTGTCTGCATCAATTTTGTTACACTTAGGTTAGTTGGTTGACTCATTAGTAAAGTTGATGGTTTCTTCCACTCGATCCGAGGTTCAAACCCCCCCCCTGCAATGTATCATATCAAAAAAGAAACAATTCTGTTACAATGTTTGTCTTACATGACGTTCAATATCGCCCTGTCGAAGTTGCAGCCTTTGATTCGATATCGAACCAAATGAAAGTAGTGTAAAAGTAAAATCAGGGGTAGGTGA

mRNA sequence

TTTTTTTTTTTTTTTTCTAAAGAAAATTACATAAAATATAATTTAGGTAGTGAATAGTAAGGATGAAGAGGAACTGCGCTCAGTTAGTGAAGTCTCCGAACTTTTGATCAATTTCAGCTCCTCCGATTGCCCTGAAGCTTATGATTTCGTTACCGCAGGCAAAATTTTGACAGAAATGGAAGCAGGTCATTCTCCAAAGTCCATGAGCTTCGTTTTGCTGCTTTCATTCTGTTTCTTCTTCGCTTCTGTTCGCTCTGTTCCATCACTTATCGGAGTGCACCCCCTTGATGAGAAATATTATTCATCGGAGGTCATAAAATGCAAGGATGGGTCTCGATCTTTTACTATTGATCGTCTCAACGACGATTTCTGTGACTGCGTTGATGGGACCGATGAGCCTGGAACTTCTGCCTGTGCAAGAGGGAAGTTCTATTGCAGGAACATGGGAAGTACGCCACGGTTCCTATTTTCTTCCCGCGTCAACGATCATATTTGTGATTGCTGTGATGGAAGTGATGAATATGATGGTAATATCTTTTGCCCGAACACGTGTGTCATGGGGGGAAATGCAGCGTACAAGAACAGTTATTATATTTCGACTTCTCGAGATGTGGATGTAATCAACAGAAAAGTAAAGGAGGAAATCACCAAGGAGGACTTGTTCCATAGGCTAATTGGTTTGAAGCTAGTAATAATCCTACAGGTACTCACAAACCTCAACCCGCTGGATAAAGAACTCCTGCTCTACCTTCACCCTTCACCGCAGAGCCATGGTCCATTGGTTGGCTAGGGCTAAGCTATATCATATATAAAGATCCATCTTAAGCCAACTTAGCCATAACCTAAACATCCTGCTTATCCATCACAGCAGCACAATAACACAAAGGATTAGCAACTCTGTCTGCATCAATTTTGTTACACTTAGGTTAGTTGGTTGACTCATTAGTAAAGTTGATGGTTTCTTCCACTCGATCCGAGGTTCAAACCCCCCCCCTGCAATGTATCATATCAAAAAAGAAACAATTCTGTTACAATGTTTGTCTTACATGACGTTCAATATCGCCCTGTCGAAGTTGCAGCCTTTGATTCGATATCGAACCAAATGAAAGTAGTGTAAAAGTAAAATCAGGGGTAGGTGA

Coding sequence (CDS)

ATGGAAGCAGGTCATTCTCCAAAGTCCATGAGCTTCGTTTTGCTGCTTTCATTCTGTTTCTTCTTCGCTTCTGTTCGCTCTGTTCCATCACTTATCGGAGTGCACCCCCTTGATGAGAAATATTATTCATCGGAGGTCATAAAATGCAAGGATGGGTCTCGATCTTTTACTATTGATCGTCTCAACGACGATTTCTGTGACTGCGTTGATGGGACCGATGAGCCTGGAACTTCTGCCTGTGCAAGAGGGAAGTTCTATTGCAGGAACATGGGAAGTACGCCACGGTTCCTATTTTCTTCCCGCGTCAACGATCATATTTGTGATTGCTGTGATGGAAGTGATGAATATGATGGTAATATCTTTTGCCCGAACACGTGTGTCATGGGGGGAAATGCAGCGTACAAGAACAGTTATTATATTTCGACTTCTCGAGATGTGGATGTAATCAACAGAAAAGTAAAGGAGGAAATCACCAAGGAGGACTTGTTCCATAGGCTAATTGGTTTGAAGCTAGTAATAATCCTACAGGTACTCACAAACCTCAACCCGCTGGATAAAGAACTCCTGCTCTACCTTCACCCTTCACCGCAGAGCCATGGTCCATTGGTTGGCTAG

Protein sequence

MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVLTNLNPLDKELLLYLHPSPQSHGPLVG

Homology

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BLAST of Cp4.1LG15g07190 vs. ExPASy Swiss-Prot
Match: Q9FM96 (Glucosidase 2 subunit beta OS=Arabidopsis thaliana OX=3702 GN=PSL4 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 8.9e-41
Identity = 81/128 (63.28%), Postives = 93/128 (72.66%), Query Frame = 0


Query: 10  MSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYY-SSEVIKCKDGSRSFTIDRLNDDFCDC 69
           +SF+LLL+     +S       +G+ P DEKYY SS  IKCKDGS+ FT  +LNDDFCDC
Sbjct: 16  LSFLLLLASAIRSSSSPPNDPFLGISPQDEKYYKSSSEIKCKDGSKKFTKAQLNDDFCDC 75

Query: 70  VDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVM 129
            DGTDEPGTSAC  GKFYCRN G +P  LFSSRVND ICDCCDGSDEYDG++ C NTC  
Sbjct: 76  SDGTDEPGTSACPTGKFYCRNAGHSPVILFSSRVNDGICDCCDGSDEYDGHVSCQNTCWE 135

Query: 130 GGNAAYKN 137
            G AA +N
Sbjct: 136 AGKAAREN 143

[Close]

BLAST of Cp4.1LG15g07190 vs. ExPASy Swiss-Prot
Match: Q5NBP9 (Glucosidase 2 subunit beta OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0276800 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.7e-37
Identity = 72/121 (59.50%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 13  VLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCVDGT 72
           +LLL      A+ R     +G+ P DE Y+   VI+C+DGS  F  D+LNDDFCDC DGT
Sbjct: 9   LLLLRISASAAASRPPLDTLGIPPQDEAYFRGGVIRCRDGSGRFARDKLNDDFCDCPDGT 68

Query: 73  DEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNA 132
           DEPGTSAC  GKFYC+N G +P  +FSSRVND ICDCCDGSDEYD N+ C NTC   G A
Sbjct: 69  DEPGTSACPEGKFYCQNAGHSPITIFSSRVNDGICDCCDGSDEYDSNVTCKNTCWEAGKA 128

Query: 133 A 134
           A
Sbjct: 129 A 129

[Close]

BLAST of Cp4.1LG15g07190 vs. ExPASy Swiss-Prot
Match: A2WNF5 (Glucosidase 2 subunit beta OS=Oryza sativa subsp. indica OX=39946 GN=OsI_01383 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.5e-37
Identity = 72/125 (57.60%), Postives = 86/125 (68.80%), Query Frame = 0


Query: 9   SMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDC 68
           ++  +LLL      A+ R     +G+ P DE Y+   VI+C+DGS  F  D+LNDDFCDC
Sbjct: 5   TLLLLLLLRISASAAASRPPLDTLGIPPQDEAYFRGGVIRCRDGSGRFARDKLNDDFCDC 64

Query: 69  VDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVM 128
            DGTDEPGTSAC  GKFYC+N G +P  +FSSRVND ICDCCDGSDEYD N+ C NTC  
Sbjct: 65  PDGTDEPGTSACPEGKFYCQNAGHSPITIFSSRVNDGICDCCDGSDEYDSNVTCKNTCWE 124

Query: 129 GGNAA 134
            G AA
Sbjct: 125 AGKAA 129

[Close]

BLAST of Cp4.1LG15g07190 vs. ExPASy Swiss-Prot
Match: O08795 (Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.1e-25
Identity = 46/86 (53.49%), Postives = 60/86 (69.77%), Query Frame = 0


Query: 41  YYSSEVIKCKDGSRSFTIDRLNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSS 100
           Y  S+   C DG+ +   D++NDD+CDC DG+DEPGT+AC  G F+C N G  P ++ SS
Sbjct: 31  YEESKPFTCLDGTATIPFDQVNDDYCDCKDGSDEPGTAACPNGSFHCTNTGYKPLYILSS 90

Query: 101 RVNDHICDCCDGSDEYDGNIFCPNTC 127
           RVND +CDCCDG+DEY+    C NTC
Sbjct: 91  RVNDGVCDCCDGTDEYNSGTVCENTC 116

[Close]

BLAST of Cp4.1LG15g07190 vs. ExPASy Swiss-Prot
Match: P14314 (Glucosidase 2 subunit beta OS=Homo sapiens OX=9606 GN=PRKCSH PE=1 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 4.0e-25
Identity = 55/118 (46.61%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 10  MSFVLLLSFCFFFASVR-SVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDC 69
           +  +LLL  C+     R    SL   H  DE    S+   C DGS +   D++NDD+CDC
Sbjct: 3   LPLLLLLPMCWAVEVKRPRGVSLTNHHFYDE----SKPFTCLDGSATIPFDQVNDDYCDC 62

Query: 70  VDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTC 127
            DG+DEPGT+AC  G F+C N G  P ++ S+RVND +CDCCDG+DEY+  + C NTC
Sbjct: 63  KDGSDEPGTAACPNGSFHCTNTGYKPLYIPSNRVNDGVCDCCDGTDEYNSGVICENTC 116

[Close]

BLAST of Cp4.1LG15g07190 vs. NCBI nr
Match: XP_022952390.1 (glucosidase 2 subunit beta [Cucurbita moschata])

HSP 1 Score: 366 bits (940), Expect = 4.11e-127
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60
           MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR
Sbjct: 1   MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60

Query: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI 120
           LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI
Sbjct: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI 120

Query: 121 FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 177
           FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV
Sbjct: 121 FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 177

[Close]

BLAST of Cp4.1LG15g07190 vs. NCBI nr
Match: XP_023554618.1 (glucosidase 2 subunit beta [Cucurbita pepo subsp. pepo])

HSP 1 Score: 366 bits (940), Expect = 4.11e-127
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60
           MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR
Sbjct: 1   MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60

Query: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI 120
           LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI
Sbjct: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI 120

Query: 121 FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 177
           FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV
Sbjct: 121 FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 177

[Close]

BLAST of Cp4.1LG15g07190 vs. NCBI nr
Match: KAG6572276.1 (Glucosidase 2 subunit beta, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 365 bits (936), Expect = 3.65e-126
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60
           MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR
Sbjct: 26  MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 85

Query: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI 120
           LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI
Sbjct: 86  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI 145

Query: 121 FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQ 176
           FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQ
Sbjct: 146 FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQ 201

[Close]

BLAST of Cp4.1LG15g07190 vs. NCBI nr
Match: XP_022969237.1 (glucosidase 2 subunit beta [Cucurbita maxima])

HSP 1 Score: 363 bits (932), Expect = 3.47e-125
Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60
           MEAGHS KSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR
Sbjct: 39  MEAGHSTKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 98

Query: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI 120
           LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI
Sbjct: 99  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI 158

Query: 121 FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 177
           FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV
Sbjct: 159 FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 215

[Close]

BLAST of Cp4.1LG15g07190 vs. NCBI nr
Match: XP_022136263.1 (glucosidase 2 subunit beta [Momordica charantia])

HSP 1 Score: 325 bits (833), Expect = 8.32e-111
Identity = 153/177 (86.44%), Postives = 166/177 (93.79%), Query Frame = 0


Query: 1   MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60
           MEAG  PKS SFV ++S CFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR
Sbjct: 1   MEAGRPPKSTSFVSMISICFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60

Query: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI 120
           LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTP+F+FSS VND ICDCCDGSDEYDGNI
Sbjct: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPQFIFSSHVNDRICDCCDGSDEYDGNI 120

Query: 121 FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 177
           FCPNTCVMGGN AYK++ YIST++DV ++NRKVKEEITKEDLF +L+GLKLVI+LQV
Sbjct: 121 FCPNTCVMGGNIAYKSNNYISTTQDVHIVNRKVKEEITKEDLFQKLMGLKLVIVLQV 177

[Close]

BLAST of Cp4.1LG15g07190 vs. ExPASy TrEMBL
Match: A0A6J1GLM3 (glucosidase 2 subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111455090 PE=4 SV=1)

HSP 1 Score: 366 bits (940), Expect = 1.99e-127
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60
           MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR
Sbjct: 1   MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60

Query: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI 120
           LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI
Sbjct: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI 120

Query: 121 FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 177
           FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV
Sbjct: 121 FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 177

[Close]

BLAST of Cp4.1LG15g07190 vs. ExPASy TrEMBL
Match: A0A6J1HVT0 (glucosidase 2 subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111468297 PE=4 SV=1)

HSP 1 Score: 363 bits (932), Expect = 1.68e-125
Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60
           MEAGHS KSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR
Sbjct: 39  MEAGHSTKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 98

Query: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI 120
           LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI
Sbjct: 99  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI 158

Query: 121 FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 177
           FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV
Sbjct: 159 FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 215

[Close]

BLAST of Cp4.1LG15g07190 vs. ExPASy TrEMBL
Match: A0A6J1C765 (glucosidase 2 subunit beta OS=Momordica charantia OX=3673 GN=LOC111008003 PE=4 SV=1)

HSP 1 Score: 325 bits (833), Expect = 4.03e-111
Identity = 153/177 (86.44%), Postives = 166/177 (93.79%), Query Frame = 0


Query: 1   MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60
           MEAG  PKS SFV ++S CFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR
Sbjct: 1   MEAGRPPKSTSFVSMISICFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60

Query: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI 120
           LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTP+F+FSS VND ICDCCDGSDEYDGNI
Sbjct: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPQFIFSSHVNDRICDCCDGSDEYDGNI 120

Query: 121 FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 177
           FCPNTCVMGGN AYK++ YIST++DV ++NRKVKEEITKEDLF +L+GLKLVI+LQV
Sbjct: 121 FCPNTCVMGGNIAYKSNNYISTTQDVHIVNRKVKEEITKEDLFQKLMGLKLVIVLQV 177

[Close]

BLAST of Cp4.1LG15g07190 vs. ExPASy TrEMBL
Match: A0A1S4E0C8 (glucosidase 2 subunit beta isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495629 PE=4 SV=1)

HSP 1 Score: 307 bits (787), Expect = 3.82e-104
Identity = 150/177 (84.75%), Postives = 161/177 (90.96%), Query Frame = 0


Query: 1   MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60
           MEA  SPKS SFV LLS C FF SVR+ PS +GVHPLDEKYYSSEVIKCKDGSRSFTIDR
Sbjct: 1   MEA-RSPKSTSFVSLLSICLFFTSVRAAPSFLGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60

Query: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI 120
           LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRF+FSSRVNDHICDCCDGSDEY+GNI
Sbjct: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNI 120

Query: 121 FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 177
           FCPNTCVMGGN  YK++  +ST+RDVD++ RKVKEEITKEDLF +L GLKLVIILQV
Sbjct: 121 FCPNTCVMGGNM-YKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQV 175

[Close]

BLAST of Cp4.1LG15g07190 vs. ExPASy TrEMBL
Match: A0A5D3BIQ3 (Glucosidase 2 subunit beta isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold786G00030 PE=4 SV=1)

HSP 1 Score: 307 bits (787), Expect = 3.82e-104
Identity = 150/177 (84.75%), Postives = 161/177 (90.96%), Query Frame = 0


Query: 1   MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60
           MEA  SPKS SFV LLS C FF SVR+ PS +GVHPLDEKYYSSEVIKCKDGSRSFTIDR
Sbjct: 1   MEA-RSPKSTSFVSLLSICLFFTSVRAAPSFLGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60

Query: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI 120
           LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRF+FSSRVNDHICDCCDGSDEY+GNI
Sbjct: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNI 120

Query: 121 FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 177
           FCPNTCVMGGN  YK++  +ST+RDVD++ RKVKEEITKEDLF +L GLKLVIILQV
Sbjct: 121 FCPNTCVMGGNM-YKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQV 175

[Close]

BLAST of Cp4.1LG15g07190 vs. TAIR 10
Match: AT2G42390.1 (protein kinase C substrate, heavy chain-related )

HSP 1 Score: 198.7 bits (504), Expect = 4.4e-51
Identity = 99/175 (56.57%), Postives = 124/175 (70.86%), Query Frame = 0


Query: 13  VLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCVDGT 72
           VL  S      SV S   L+GVHPLDEKY+ S+VIKCKDGS+SFT DRLND+FCDC+DGT
Sbjct: 7   VLCSSLAVVVISVASTSPLVGVHPLDEKYFDSDVIKCKDGSKSFTRDRLNDNFCDCLDGT 66

Query: 73  DEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNA 132
           DEPGTSAC  GKFYCRN+GS+P+F++SSRVND ICDCCDGSDEY+ +I CPNTC+MGGN 
Sbjct: 67  DEPGTSACPNGKFYCRNIGSSPKFVYSSRVNDRICDCCDGSDEYESSIHCPNTCIMGGNV 126

Query: 133 AYKNSYYISTSRDVDVINRKV------KEEIT---KEDLFHRLIGLKLVIILQVL 179
               +Y      ++  I+ ++      KE  T    +D+   L G+KLV  LQ++
Sbjct: 127 ----NYIYKPRANLKSIHLQLGSTPHPKEFYTIGNLQDMVKNLQGMKLVFALQMV 177

[Close]

BLAST of Cp4.1LG15g07190 vs. TAIR 10
Match: AT5G56360.1 (calmodulin-binding protein )

HSP 1 Score: 168.3 bits (425), Expect = 6.3e-42
Identity = 81/128 (63.28%), Postives = 93/128 (72.66%), Query Frame = 0


Query: 10  MSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYY-SSEVIKCKDGSRSFTIDRLNDDFCDC 69
           +SF+LLL+     +S       +G+ P DEKYY SS  IKCKDGS+ FT  +LNDDFCDC
Sbjct: 16  LSFLLLLASAIRSSSSPPNDPFLGISPQDEKYYKSSSEIKCKDGSKKFTKAQLNDDFCDC 75

Query: 70  VDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVM 129
            DGTDEPGTSAC  GKFYCRN G +P  LFSSRVND ICDCCDGSDEYDG++ C NTC  
Sbjct: 76  SDGTDEPGTSACPTGKFYCRNAGHSPVILFSSRVNDGICDCCDGSDEYDGHVSCQNTCWE 135

Query: 130 GGNAAYKN 137
            G AA +N
Sbjct: 136 AGKAAREN 143

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g07190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FM96	8.9e-41	63.28	Glucosidase 2 subunit beta OS=Arabidopsis thaliana OX=3702 GN=PSL4 PE=2 SV=1	[more]
Q5NBP9	2.7e-37	59.50	Glucosidase 2 subunit beta OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0276...	[more]
A2WNF5	3.5e-37	57.60	Glucosidase 2 subunit beta OS=Oryza sativa subsp. indica OX=39946 GN=OsI_01383 P...	[more]
O08795	3.1e-25	53.49	Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=1 SV=1	[more]
P14314	4.0e-25	46.61	Glucosidase 2 subunit beta OS=Homo sapiens OX=9606 GN=PRKCSH PE=1 SV=2	[more]

BLAST of Cp4.1LG15g07190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952390.1	4.11e-127	100.00	glucosidase 2 subunit beta [Cucurbita moschata]	[more]
XP_023554618.1	4.11e-127	100.00	glucosidase 2 subunit beta [Cucurbita pepo subsp. pepo]	[more]
KAG6572276.1	3.65e-126	100.00	Glucosidase 2 subunit beta, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022969237.1	3.47e-125	99.44	glucosidase 2 subunit beta [Cucurbita maxima]	[more]
XP_022136263.1	8.32e-111	86.44	glucosidase 2 subunit beta [Momordica charantia]	[more]

BLAST of Cp4.1LG15g07190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GLM3	1.99e-127	100.00	glucosidase 2 subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111455090 PE=4 SV...	[more]
A0A6J1HVT0	1.68e-125	99.44	glucosidase 2 subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111468297 PE=4 SV=1	[more]
A0A6J1C765	4.03e-111	86.44	glucosidase 2 subunit beta OS=Momordica charantia OX=3673 GN=LOC111008003 PE=4 S...	[more]
A0A1S4E0C8	3.82e-104	84.75	glucosidase 2 subunit beta isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495629 PE...	[more]
A0A5D3BIQ3	3.82e-104	84.75	Glucosidase 2 subunit beta isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Cp4.1LG15g07190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42390.1	4.4e-51	56.57	protein kinase C substrate, heavy chain-related	[more]
AT5G56360.1	6.3e-42	63.28	calmodulin-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028146	Glucosidase II beta subunit, N-terminal	PFAM	PF12999	PRKCSH-like	coord: 24..129 e-value: 3.3E-31 score: 108.4
None	No IPR available	PANTHER	PTHR12630:SF17	EXPRESSED PROTEIN	coord: 20..182
IPR039794	Glucosidase II beta subunit-like	PANTHER	PTHR12630	N-LINKED OLIGOSACCHARIDE PROCESSING	coord: 20..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g07190.1	Cp4.1LG15g07190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006491	N-glycan processing
cellular_component	GO:0017177	glucosidase II complex
cellular_component	GO:0016021	integral component of membrane