Cp4.1LG15g07180 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g07180
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Calcium-binding EF-hand family protein
Location	Cp4.1LG15: 7569860 .. 7570273 (+)
RNA-Seq Expression	Cp4.1LG15g07180
Synteny	Cp4.1LG15g07180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGTGGAAATATTGGACAGTGAAACCATCGTCAACTTTGTTGAAGACGAGGCAGCCTTTGGTGCCTTCATTAGAGAACGCTTTGCTCACCTTGACACCAACCATGATGGCCTCCTTTCTTATAGCGAGATGCTAGAGGAGTTGCAGAGCCTGAGGGTGACACAGAACGACTTTGAAATTGACGTGAAGCTTGACCCAGATGAGGTTTCTTCTGTTTATAGTGCTCTGTTCTTGCAGTTTGATCGTGACTTGAATGGAACAGTTGATCTGGATGAGTTCAAGACTGAGACCAAAAGGATGATGCTTGGGATGGCTAATGGAATGGGGTTCTTGCCTGTTCAGATGGTGCTGGAAGAAGGCAGCTTGTTGATGAAGGCTGTTGAGCGTGAAACTGCTGTAATGGCCACTTGA

mRNA sequence

ATGAGTGTGGAAATATTGGACAGTGAAACCATCGTCAACTTTGTTGAAGACGAGGCAGCCTTTGGTGCCTTCATTAGAGAACGCTTTGCTCACCTTGACACCAACCATGATGGCCTCCTTTCTTATAGCGAGATGCTAGAGGAGTTGCAGAGCCTGAGGGTGACACAGAACGACTTTGAAATTGACGTGAAGCTTGACCCAGATGAGGTTTCTTCTGTTTATAGTGCTCTGTTCTTGCAGTTTGATCGTGACTTGAATGGAACAGTTGATCTGGATGAGTTCAAGACTGAGACCAAAAGGATGATGCTTGGGATGGCTAATGGAATGGGGTTCTTGCCTGTTCAGATGGTGCTGGAAGAAGGCAGCTTGTTGATGAAGGCTGTTGAGCGTGAAACTGCTGTAATGGCCACTTGA

Coding sequence (CDS)

ATGAGTGTGGAAATATTGGACAGTGAAACCATCGTCAACTTTGTTGAAGACGAGGCAGCCTTTGGTGCCTTCATTAGAGAACGCTTTGCTCACCTTGACACCAACCATGATGGCCTCCTTTCTTATAGCGAGATGCTAGAGGAGTTGCAGAGCCTGAGGGTGACACAGAACGACTTTGAAATTGACGTGAAGCTTGACCCAGATGAGGTTTCTTCTGTTTATAGTGCTCTGTTCTTGCAGTTTGATCGTGACTTGAATGGAACAGTTGATCTGGATGAGTTCAAGACTGAGACCAAAAGGATGATGCTTGGGATGGCTAATGGAATGGGGTTCTTGCCTGTTCAGATGGTGCTGGAAGAAGGCAGCTTGTTGATGAAGGCTGTTGAGCGTGAAACTGCTGTAATGGCCACTTGA

Protein sequence

MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEEGSLLMKAVERETAVMAT

Homology

[Close]

BLAST of Cp4.1LG15g07180 vs. NCBI nr
Match: XP_023554640.1 (uncharacterized protein LOC111811830 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262 bits (669), Expect = 6.12e-88
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE 60
           MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE
Sbjct: 1   MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE 60

Query: 61  IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE 120
           IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE
Sbjct: 61  IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE 120

Query: 121 GSLLMKAVERETAVMAT 137
           GSLLMKAVERETAVMAT
Sbjct: 121 GSLLMKAVERETAVMAT 137

[Close]

BLAST of Cp4.1LG15g07180 vs. NCBI nr
Match: XP_022952573.1 (uncharacterized protein LOC111455224 [Cucurbita moschata] >KAG6572255.1 hypothetical protein SDJN03_28983, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011886.1 hypothetical protein SDJN02_26793, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 260 bits (665), Expect = 2.49e-87
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE 60
           MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE
Sbjct: 1   MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE 60

Query: 61  IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE 120
           IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE
Sbjct: 61  IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE 120

Query: 121 GSLLMKAVERETAVMAT 137
           GSLLMKAVERET VMAT
Sbjct: 121 GSLLMKAVERETGVMAT 137

[Close]

BLAST of Cp4.1LG15g07180 vs. NCBI nr
Match: XP_022969294.1 (uncharacterized protein LOC111468343 [Cucurbita maxima])

HSP 1 Score: 254 bits (648), Expect = 1.08e-84
Identity = 132/137 (96.35%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE 60
           MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEML ELQSLRVTQNDFE
Sbjct: 1   MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLAELQSLRVTQNDFE 60

Query: 61  IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE 120
           IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEF+TETKRMMLGMANGMGFLPVQM+LEE
Sbjct: 61  IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFRTETKRMMLGMANGMGFLPVQMLLEE 120

Query: 121 GSLLMKAVERETAVMAT 137
           GS LMKAVE ETAVMAT
Sbjct: 121 GSFLMKAVEHETAVMAT 137

[Close]

BLAST of Cp4.1LG15g07180 vs. NCBI nr
Match: XP_038887952.1 (uncharacterized protein LOC120077919 [Benincasa hispida])

HSP 1 Score: 219 bits (558), Expect = 5.14e-71
Identity = 114/136 (83.82%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 1   MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE 60
           MSVEILDS TIVNFVEDEAAF A+IR+RF HLDTNHDG LSY+EMLEELQSLRV + DF 
Sbjct: 1   MSVEILDSTTIVNFVEDEAAFNAYIRDRFDHLDTNHDGHLSYNEMLEELQSLRVFETDFG 60

Query: 61  IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE 120
            D KLDP+E+SSVYS+LFLQFDRD +GTVDLDEFKTETKRMML MANG+GFLPVQMVLEE
Sbjct: 61  KDEKLDPEELSSVYSSLFLQFDRDSDGTVDLDEFKTETKRMMLAMANGIGFLPVQMVLEE 120

Query: 121 GSLLMKAVERETAVMA 136
           GS LMKAVERETA+MA
Sbjct: 121 GSFLMKAVERETAIMA 136

[Close]

BLAST of Cp4.1LG15g07180 vs. NCBI nr
Match: XP_038888297.1 (uncharacterized protein LOC120078146 [Benincasa hispida])

HSP 1 Score: 220 bits (560), Expect = 1.46e-70
Identity = 114/136 (83.82%), Postives = 123/136 (90.44%), Query Frame = 0


Query: 1   MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE 60
           MSVEILDS TIVNFVED+ AFGAFIR+RFAHLDTNHDGLLSY+EMLEEL +LRV +  F 
Sbjct: 54  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNHDGLLSYTEMLEELHTLRVFETHFG 113

Query: 61  IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE 120
           IDVK DPDE+SSVYS+LFLQFDRD +GTVDLDEF  ETKRMML MANGMGFLPVQMVLEE
Sbjct: 114 IDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKRMMLDMANGMGFLPVQMVLEE 173

Query: 121 GSLLMKAVERETAVMA 136
           GS LMKAVERETA+MA
Sbjct: 174 GSFLMKAVERETAIMA 189

[Close]

BLAST of Cp4.1LG15g07180 vs. ExPASy TrEMBL
Match: A0A6J1GKZ8 (uncharacterized protein LOC111455224 OS=Cucurbita moschata OX=3662 GN=LOC111455224 PE=4 SV=1)

HSP 1 Score: 260 bits (665), Expect = 1.21e-87
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE 60
           MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE
Sbjct: 1   MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE 60

Query: 61  IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE 120
           IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE
Sbjct: 61  IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE 120

Query: 121 GSLLMKAVERETAVMAT 137
           GSLLMKAVERET VMAT
Sbjct: 121 GSLLMKAVERETGVMAT 137

[Close]

BLAST of Cp4.1LG15g07180 vs. ExPASy TrEMBL
Match: A0A6J1I262 (uncharacterized protein LOC111468343 OS=Cucurbita maxima OX=3661 GN=LOC111468343 PE=4 SV=1)

HSP 1 Score: 254 bits (648), Expect = 5.22e-85
Identity = 132/137 (96.35%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE 60
           MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEML ELQSLRVTQNDFE
Sbjct: 1   MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLAELQSLRVTQNDFE 60

Query: 61  IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE 120
           IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEF+TETKRMMLGMANGMGFLPVQM+LEE
Sbjct: 61  IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFRTETKRMMLGMANGMGFLPVQMLLEE 120

Query: 121 GSLLMKAVERETAVMAT 137
           GS LMKAVE ETAVMAT
Sbjct: 121 GSFLMKAVEHETAVMAT 137

[Close]

BLAST of Cp4.1LG15g07180 vs. ExPASy TrEMBL
Match: A0A5D3E445 (Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00260 PE=4 SV=1)

HSP 1 Score: 218 bits (554), Expect = 1.01e-70
Identity = 113/136 (83.09%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 1   MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE 60
           MSVEILDS TIVNFVED+ AFGAFIR+RFAHLDTNHDGLLSYSEMLEEL +LRV +  F 
Sbjct: 1   MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60

Query: 61  IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE 120
           IDVK DP+E+SSVYS+LFLQFD D +GTVDLDEFK ETKRMML MANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPEELSSVYSSLFLQFDHDSSGTVDLDEFKAETKRMMLDMANGMGFLPVQMVLEE 120

Query: 121 GSLLMKAVERETAVMA 136
           GS LMKAVERETA+ A
Sbjct: 121 GSFLMKAVERETAITA 136

[Close]

BLAST of Cp4.1LG15g07180 vs. ExPASy TrEMBL
Match: A0A1S3BLY5 (uncharacterized protein LOC103491294 OS=Cucumis melo OX=3656 GN=LOC103491294 PE=4 SV=1)

HSP 1 Score: 218 bits (554), Expect = 1.01e-70
Identity = 113/136 (83.09%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 1   MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE 60
           MSVEILDS TIVNFVED+ AFGAFIR+RFAHLDTNHDGLLSYSEMLEEL +LRV +  F 
Sbjct: 1   MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60

Query: 61  IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE 120
           IDVK DP+E+SSVYS+LFLQFD D +GTVDLDEFK ETKRMML MANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPEELSSVYSSLFLQFDHDSSGTVDLDEFKAETKRMMLDMANGMGFLPVQMVLEE 120

Query: 121 GSLLMKAVERETAVMA 136
           GS LMKAVERETA+ A
Sbjct: 121 GSFLMKAVERETAITA 136

[Close]

BLAST of Cp4.1LG15g07180 vs. ExPASy TrEMBL
Match: A0A0A0KHT7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G418660 PE=4 SV=1)

HSP 1 Score: 217 bits (553), Expect = 1.44e-70
Identity = 113/136 (83.09%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 1   MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE 60
           MSVEILDS TIVNFVED+ AFGAFIR+RFAHLDTN DGLLSYSEMLEEL +LRV +  F 
Sbjct: 1   MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFG 60

Query: 61  IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE 120
           IDVK DPDE+SSVYS+LFLQFDRD +GTVDLDEF+ ETKRMML MANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFRAETKRMMLAMANGMGFLPVQMVLEE 120

Query: 121 GSLLMKAVERETAVMA 136
           GS LMKAVERETA+ A
Sbjct: 121 GSFLMKAVERETAITA 136

[Close]

BLAST of Cp4.1LG15g07180 vs. TAIR 10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 110.9 bits (276), Expect = 8.1e-25
Identity = 54/135 (40.00%), Postives = 93/135 (68.89%), Query Frame = 0


Query: 1   MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE 60
           M V ++D  T+ +FV+DE  F   + ERFA LD N DG+LS SE+ +  +S+R+ ++ F 
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 61  IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVL-- 120
           +DV    DE++++Y ++F +FD D +G+VDL+EF++E K+++L +A+G+G  P+ MVL  
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 121 EEGSLLMKAVERETA 134
           ++ + L KA + E +
Sbjct: 121 DDDNFLKKAADLEAS 135

[Close]

BLAST of Cp4.1LG15g07180 vs. TAIR 10
Match: AT1G54530.1 (Calcium-binding EF hand family protein )

HSP 1 Score: 60.8 bits (146), Expect = 9.6e-10
Identity = 38/128 (29.69%), Postives = 68/128 (53.12%), Query Frame = 0


Query: 5   ILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVK 64
           ++ S+T++ F+ D  +F +   + F  LD + +G+LS SE+ + L ++   +++      
Sbjct: 5   VITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVESEV----- 64

Query: 65  LDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEEGSLL 124
              DE  +VY+A+F +F  DL        F+     ++  MA G+G  PV MV+    L+
Sbjct: 65  APGDETDNVYNAIFERFGEDLVP----KNFRDLIAEILTAMARGIGNSPVIMVVHNDGLI 123

Query: 125 MKAVERET 133
           MKAV  E+
Sbjct: 125 MKAVLHES 123

[Close]

BLAST of Cp4.1LG15g07180 vs. TAIR 10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 51.2 bits (121), Expect = 7.6e-07
Identity = 35/125 (28.00%), Postives = 57/125 (45.60%), Query Frame = 0


Query: 4   EILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDV 63
           ++LD   IV  VE+E  F  F+ ++F  LD + DG LS +E+   +  +           
Sbjct: 13  QVLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVADIGAALGLPAQGT 72

Query: 64  KLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEEGSL 123
             D D    +YS +  +F       V   EFK     ++LGMA G+   P+ ++  +G  
Sbjct: 73  SPDSDH---IYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRMDGED 132

Query: 124 LMKAV 129
           L + V
Sbjct: 133 LSEFV 134

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g07180 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG15g07180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023554640.1	6.12e-88	100.00	uncharacterized protein LOC111811830 [Cucurbita pepo subsp. pepo]	[more]
XP_022952573.1	2.49e-87	99.27	uncharacterized protein LOC111455224 [Cucurbita moschata] >KAG6572255.1 hypothet...	[more]
XP_022969294.1	1.08e-84	96.35	uncharacterized protein LOC111468343 [Cucurbita maxima]	[more]
XP_038887952.1	5.14e-71	83.82	uncharacterized protein LOC120077919 [Benincasa hispida]	[more]
XP_038888297.1	1.46e-70	83.82	uncharacterized protein LOC120078146 [Benincasa hispida]	[more]

BLAST of Cp4.1LG15g07180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GKZ8	1.21e-87	99.27	uncharacterized protein LOC111455224 OS=Cucurbita moschata OX=3662 GN=LOC1114552...	[more]
A0A6J1I262	5.22e-85	96.35	uncharacterized protein LOC111468343 OS=Cucurbita maxima OX=3661 GN=LOC111468343...	[more]
A0A5D3E445	1.01e-70	83.09	Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BLY5	1.01e-70	83.09	uncharacterized protein LOC103491294 OS=Cucumis melo OX=3656 GN=LOC103491294 PE=...	[more]
A0A0A0KHT7	1.44e-70	83.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G418660 PE=4 SV=1	[more]

BLAST of Cp4.1LG15g07180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44310.1	8.1e-25	40.00	Calcium-binding EF-hand family protein	[more]
AT1G54530.1	9.6e-10	29.69	Calcium-binding EF hand family protein	[more]
AT4G38810.2	7.6e-07	28.00	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 73..101 e-value: 10.0 score: 9.7 coord: 24..52 e-value: 0.33 score: 20.0
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 25..96 e-value: 1.5E-10 score: 41.3
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 69..104 score: 9.101698
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 20..55 score: 9.324862
None	No IPR available	GENE3D	1.10.238.10		coord: 23..98 e-value: 1.1E-11 score: 46.4
None	No IPR available	PANTHER	PTHR34574:SF10	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-LIKE	coord: 1..133
None	No IPR available	PANTHER	PTHR34574	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED	coord: 1..133
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 33..45
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 24..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g07180.1	Cp4.1LG15g07180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding