Cp4.1LG15g06300 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g06300
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Pectinesterase
Location	Cp4.1LG15: 6995380 .. 6997689 (-)
RNA-Seq Expression	Cp4.1LG15g06300
Synteny	Cp4.1LG15g06300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGACCACCATGAAGCTGTGAAAATCACATCCTCTTGCTTGTTCTGATAACCACATCCTCTTGCTTCTTCTTTTACTTTACACCGTTCTTGTTTGTTCTTGCTCTTGTTTTCTCTTCTTCAACTTAACTTTAAAGATGGCGTTTTTCCAGCTGATTTCATGTTTCTTTTTATGCTTTTTCAACTTTCTGGCCGTTGTTGATTCCACCCATTTTAATGCAACAGTAGCATTAGATGGAACGGGAAACTTCAAAAGCATTACTGATGCAATTGCAGCCGCTCCAAACAACTCCAATACACGATTTTACATTCGTGTATCTTCCGGCATTTACCACGAACATCTTGAAATTGCATCAGCCAAGAAGTTCATTGCTTTGATTGGCGAGAATGAGTTTACAACCATTATCGTCGACAATAGAAGTAATGCCGGTGGATTCAGAACCTCTGAATCCGCAACCATGGGTAATTACTCTTATTCTTTATTTTTATGAAATAATTTGTTTGAGCAAAATAAATCTTACCTCTGATAAAATGGGGTAAGGTGTTAATATTTAGCTAAAAAACTTGAATCCATATGACAATTATTTTCTCCTTTTGAATTAGGCTTTCTTTTGGAGAATCGTATGTAGAATAATATTGTTTGAATCCTTACTAATTTCTTTATTCTTATTTGATGCAGTGGTCAAAGGTAACAACTTTATGGCCCAACATTTGAGTTTCGAGAATTCTGCAGACCATCAAGACGGCCAAGCAGTTGCTGTTCTTGACGATGCCAAATACACGGTTTATTACAAATGCAGATTCCTGAGTTTTCAAGACACCCTATATTCGAAGGGAGAATATCAATTCTTTAAGGGGTGCGACATCTATGGAACGGTGGATTTTATTTTTGGCAATGGACTTGCTATGTTCCAAGACTGTAACGTATATGCTCGGTTACCGAGCAATGACTCTACAGTCACTGCACAGTCCAAGAAACAATGGACCCAAAGTGGCTTCTCCTTTCAGAACTGTACAGTCACAGTTTCTCCGGAGATAGCTTCCTGTAAGGCCTTAGTTAAAATCTATCTTGGTCGGCCATGGAAACCATATTCAACAGTTGTGTTCATGGAGTCATTTTTGGATGACAACGTGCAACCACAGGGATGGATGTTGTGGCCAGGGGTACCAGTAAACAACCTCTTTTATGCCGAGTACAACAATAGAGGTCCTGGTGCTAACACAACACACCGAGTTAATTGGCCAGGTTTTCATGTAATCGATAGACAATTAGCTAAAAGTTGTACGGTAGAAAACTTTATTAATGGGACTTATTGGTTGCCCGAAACAAATGTACCCTATACAAGTGGACTTTATTCTTAATGAAATTGCCTCATCAACATTGATAAATATCCATATGCATGTAAAAGTTTTATTGTAGAGAACTTTATTTTTTTTAATGAGCACATCTCAGGTTTAATGAAAAGGTTAAATAAAAAATATTATTTAATTAAAAAAATATTTAAGACTTACCTTTTACCTTAAGATTCCTATTTGACCTTATGAATTGTTATATACATCCATTCCTAATTAAATGTGCCCGAATTAATTTCCTAATTAAATGTACATGAACTAATTTCCTAATTAAATGTACATGAACTAATTTCCAAAACAAGTTGGGAAATTCATTAGTTTTGCACTATAAATTTCTACTATGTCTAAATAGGATTATTGCCAAAGATGAAGAACACGTCTTCTTCCCTCACATTTCTGGGTGCTTTTACCCTTCTTTTACTATCCATTTTCAACCCTTCCATGTCAGCCAAGGTCGAAGAGACTAGAAGCACCTTTGTACATGATACTTGCAACAAATTTCAAATTGAGCAATTGTATAAGTTGTGCATTCCTGAGATTGATTCAGATTTTCGTGAAGATTTGAAGTCAAATTTGACAGGTATTTTAATTATATTTGTGAATCATAGCATCAGTAATTTCAACGACAACATTGCGTTCCTTCAAAGAGAGATAAAGTCGGGAAAGTTAAATGGTGAAACAAAAGTGATGTATAATGGGTGTTTGGAAGATTTTGAAAGAGGAAATGGTGATTTGCAAGAAACAATGCATATACTACTTACCCAAACGGGGATAGACGCGTATAATTTGCCAACAATCAATATTCCTAACTATGTAAGTGAATGCGTTGATTTTTATGAAGGTGACCCTATACCACCCGAGTGGCAGTCTCGCTACAATACTTCATGGAACTTATTGACTCTTATTGGGGTAACGTCTAATCTCATGAAATGTAATCGTGACATTGCATGTATCCCTTAA

mRNA sequence

TGACCACCATGAAGCTGTGAAAATCACATCCTCTTGCTTGTTCTGATAACCACATCCTCTTGCTTCTTCTTTTACTTTACACCGTTCTTGTTTGTTCTTGCTCTTGTTTTCTCTTCTTCAACTTAACTTTAAAGATGGCGTTTTTCCAGCTGATTTCATGTTTCTTTTTATGCTTTTTCAACTTTCTGGCCGTTGTTGATTCCACCCATTTTAATGCAACAGTAGCATTAGATGGAACGGGAAACTTCAAAAGCATTACTGATGCAATTGCAGCCGCTCCAAACAACTCCAATACACGATTTTACATTCGTGTATCTTCCGGCATTTACCACGAACATCTTGAAATTGCATCAGCCAAGAAGTTCATTGCTTTGATTGGCGAGAATGAGTTTACAACCATTATCGTCGACAATAGAAGTAATGCCGGTGGATTCAGAACCTCTGAATCCGCAACCATGGCCAAGGTCGAAGAGACTAGAAGCACCTTTGTACATGATACTTGCAACAAATTTCAAATTGAGCAATTGTATAAGTTGTGCATTCCTGAGATTGATTCAGATTTTCGTGAAGATTTGAAGTCAAATTTGACAGGTGACCCTATACCACCCGAGTGGCAGTCTCGCTACAATACTTCATGGAACTTATTGACTCTTATTGGGGTAACGTCTAATCTCATGAAATGTAATCGTGACATTGCATGTATCCCTTAA

Coding sequence (CDS)

ATGGCGTTTTTCCAGCTGATTTCATGTTTCTTTTTATGCTTTTTCAACTTTCTGGCCGTTGTTGATTCCACCCATTTTAATGCAACAGTAGCATTAGATGGAACGGGAAACTTCAAAAGCATTACTGATGCAATTGCAGCCGCTCCAAACAACTCCAATACACGATTTTACATTCGTGTATCTTCCGGCATTTACCACGAACATCTTGAAATTGCATCAGCCAAGAAGTTCATTGCTTTGATTGGCGAGAATGAGTTTACAACCATTATCGTCGACAATAGAAGTAATGCCGGTGGATTCAGAACCTCTGAATCCGCAACCATGGCCAAGGTCGAAGAGACTAGAAGCACCTTTGTACATGATACTTGCAACAAATTTCAAATTGAGCAATTGTATAAGTTGTGCATTCCTGAGATTGATTCAGATTTTCGTGAAGATTTGAAGTCAAATTTGACAGGTGACCCTATACCACCCGAGTGGCAGTCTCGCTACAATACTTCATGGAACTTATTGACTCTTATTGGGGTAACGTCTAATCTCATGAAATGTAATCGTGACATTGCATGTATCCCTTAA

Protein sequence

MAFFQLISCFFLCFFNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATMAKVEETRSTFVHDTCNKFQIEQLYKLCIPEIDSDFREDLKSNLTGDPIPPEWQSRYNTSWNLLTLIGVTSNLMKCNRDIACIP

Homology

[Close]

BLAST of Cp4.1LG15g06300 vs. ExPASy Swiss-Prot
Match: O49006 (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana OX=3702 GN=PME3 PE=1 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 5.1e-14
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 27  NATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFIALIGENEF 86
           +ATVA DG+G FK++  A+AAAP NSN R+ I + +G+Y E++E+A  KK I  +G+   
Sbjct: 281 DATVAADGSGTFKTVAAAVAAAPENSNKRYVIHIKAGVYRENVEVAKKKKNIMFMGDGRT 340

Query: 87  TTIIVDNRSNAGGFRTSESATMAKVEE 114
            TII  +R+   G  T  SAT+A V E
Sbjct: 341 RTIITGSRNVVDGSTTFHSATVAAVGE 367

[Close]

BLAST of Cp4.1LG15g06300 vs. ExPASy Swiss-Prot
Match: O81415 (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana OX=3702 GN=PME39 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.9e-13
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 0


Query: 19  AVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFI 78
           A V  T++N +VA+DGTGNF +I DA+ AAPN S TRF I +  G Y E++E+   K  I
Sbjct: 213 APVQETNYNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMI 272

Query: 79  ALIGENEFTTIIVDNRSNAGGFRTSESATM 109
             IG+    T+I  NRS   G+ T ++ T+
Sbjct: 273 MFIGDGIGKTVIKANRSRIDGWSTFQTPTV 302

[Close]

BLAST of Cp4.1LG15g06300 vs. ExPASy Swiss-Prot
Match: Q1JPL7 (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana OX=3702 GN=PME18 PE=1 SV=3)

HSP 1 Score: 75.1 bits (183), Expect = 9.6e-13
Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 27  NATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFIALIGENEF 86
           N  VA DGTG FK++ +A+AAAP NSNTR+ I V  G+Y E ++I   KK + L+G+ + 
Sbjct: 246 NVVVAKDGTGKFKTVNEAVAAAPENSNTRYVIYVKKGVYKETIDIGKKKKNLMLVGDGKD 305

Query: 87  TTIIVDNRSNAGGFRTSESATMA 110
            TII  + +   G  T  SAT+A
Sbjct: 306 ATIITGSLNVIDGSTTFRSATVA 328

[Close]

BLAST of Cp4.1LG15g06300 vs. ExPASy Swiss-Prot
Match: O04886 (Pectinesterase 1 OS=Citrus sinensis OX=2711 GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.1e-12
Identity = 38/87 (43.68%), Postives = 53/87 (60.92%), Query Frame = 0


Query: 27  NATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFIALIGENEF 86
           NA VA DG+GNFK++  A+AAAP     R+ IR+ +G+Y E++E+    K I  IG+   
Sbjct: 273 NAVVAADGSGNFKTVAAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRT 332

Query: 87  TTIIVDNRSNAGGFRTSESATMAKVEE 114
            TII  +R+   G  T +SAT A V E
Sbjct: 333 RTIITGSRNVVDGSTTFKSATAAVVGE 359

[Close]

BLAST of Cp4.1LG15g06300 vs. ExPASy Swiss-Prot
Match: O81301 (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana OX=3702 GN=PME40 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.1e-12
Identity = 41/88 (46.59%), Postives = 54/88 (61.36%), Query Frame = 0


Query: 21  VDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFIAL 80
           VD T  N  VA +GTGN+ +I +AI+AAPN+S TRF I +  G Y E++EI   K  I  
Sbjct: 201 VDETKVNLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMF 260

Query: 81  IGENEFTTIIVDNRSNAGGFRTSESATM 109
           IG+    T+I  NRS A G+    SAT+
Sbjct: 261 IGDGIGRTVIKANRSYADGWTAFHSATV 288

[Close]

BLAST of Cp4.1LG15g06300 vs. NCBI nr
Match: KAG6572151.1 (putative pectinesterase/pectinesterase inhibitor 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 248 bits (633), Expect = 1.01e-76
Identity = 187/499 (37.47%), Postives = 187/499 (37.47%), Query Frame = 0


Query: 1   MAFFQLISCFFLCFFNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 60
           MAFFQLISCFFLCF NFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV
Sbjct: 1   MAFFQLISCFFLCFLNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 60

Query: 61  SSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM------------ 120
           S GIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM            
Sbjct: 61  SPGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATMVVKGNNFMAQHL 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 SFENSADHQDGQAVAVLDDAKYTVYYKCRFLSFQDTLYSKGEYQFFKGCDIYGTVDFIFG 180

Query: 181 ------------------------------------------------------------ 191
                                                                       
Sbjct: 181 NGLAMFQDCNVYARLPSNDSTVTAQSKNQWTQSGFSFQNCTVTVSPEIASCKALVKIYLG 240

[Close]

BLAST of Cp4.1LG15g06300 vs. NCBI nr
Match: XP_023554541.1 (probable pectinesterase/pectinesterase inhibitor 7 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 210 bits (534), Expect = 9.17e-64
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAFFQLISCFFLCFFNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 60
           MAFFQLISCFFLCFFNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV
Sbjct: 1   MAFFQLISCFFLCFFNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 60

Query: 61  SSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM 108
           SSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM
Sbjct: 61  SSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM 108

[Close]

BLAST of Cp4.1LG15g06300 vs. NCBI nr
Match: XP_022952379.1 (probable pectinesterase/pectinesterase inhibitor 7 isoform X2 [Cucurbita moschata])

HSP 1 Score: 203 bits (517), Expect = 2.66e-61
Identity = 105/108 (97.22%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MAFFQLISCFFLCFFNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 60
           MAFFQ ISCFFLCF NFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV
Sbjct: 1   MAFFQRISCFFLCFLNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 60

Query: 61  SSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM 108
           S GIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM
Sbjct: 61  SPGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM 108

[Close]

BLAST of Cp4.1LG15g06300 vs. NCBI nr
Match: XP_022952377.1 (probable pectinesterase/pectinesterase inhibitor 7 isoform X1 [Cucurbita moschata])

HSP 1 Score: 203 bits (517), Expect = 3.33e-61
Identity = 105/108 (97.22%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MAFFQLISCFFLCFFNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 60
           MAFFQ ISCFFLCF NFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV
Sbjct: 1   MAFFQRISCFFLCFLNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 60

Query: 61  SSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM 108
           S GIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM
Sbjct: 61  SPGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM 108

[Close]

BLAST of Cp4.1LG15g06300 vs. NCBI nr
Match: XP_023511664.1 (probable pectinesterase/pectinesterase inhibitor 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147 bits (371), Expect = 2.44e-39
Identity = 76/108 (70.37%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 1   MAFFQLISCFFLCFFNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 60
           MAF QL++C F  F N LA+VD   FNATV+LDG+G+FKSI++AIAAAPNNSNTRFYIRV
Sbjct: 1   MAFLQLVACLFFFFANVLALVDPIRFNATVSLDGSGDFKSISEAIAAAPNNSNTRFYIRV 60

Query: 61  SSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM 108
           + GIY  HLEI  AKKFIALIG+N  TTIIVDNRS+  GF+TSES T+
Sbjct: 61  TPGIYRGHLEIPPAKKFIALIGDNALTTIIVDNRSHGTGFKTSESTTL 108

[Close]

BLAST of Cp4.1LG15g06300 vs. ExPASy TrEMBL
Match: A0A6J1GLJ0 (Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111455081 PE=4 SV=1)

HSP 1 Score: 203 bits (517), Expect = 1.29e-61
Identity = 105/108 (97.22%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MAFFQLISCFFLCFFNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 60
           MAFFQ ISCFFLCF NFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV
Sbjct: 1   MAFFQRISCFFLCFLNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 60

Query: 61  SSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM 108
           S GIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM
Sbjct: 61  SPGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM 108

[Close]

BLAST of Cp4.1LG15g06300 vs. ExPASy TrEMBL
Match: A0A6J1GK92 (Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111455081 PE=4 SV=1)

HSP 1 Score: 203 bits (517), Expect = 1.61e-61
Identity = 105/108 (97.22%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MAFFQLISCFFLCFFNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 60
           MAFFQ ISCFFLCF NFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV
Sbjct: 1   MAFFQRISCFFLCFLNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 60

Query: 61  SSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM 108
           S GIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM
Sbjct: 61  SPGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM 108

[Close]

BLAST of Cp4.1LG15g06300 vs. ExPASy TrEMBL
Match: A0A6J1GM54 (Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111455508 PE=4 SV=1)

HSP 1 Score: 145 bits (366), Expect = 6.52e-39
Identity = 76/108 (70.37%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 1   MAFFQLISCFFLCFFNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 60
           MAF QL +C F  F N LA+VDS  FNA V+LDG+G+FKSI++AIAAAPNNSNTRFYIRV
Sbjct: 1   MAFLQLAACLFFFFANVLALVDSIRFNAVVSLDGSGDFKSISEAIAAAPNNSNTRFYIRV 60

Query: 61  SSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM 108
           + GIY  HLEI  AKKFIALIG++  TTIIVDNRS+  GF+TSESAT+
Sbjct: 61  TPGIYRGHLEIPPAKKFIALIGDSALTTIIVDNRSHGTGFKTSESATL 108

[Close]

BLAST of Cp4.1LG15g06300 vs. ExPASy TrEMBL
Match: A0A6J1HZD2 (Pectinesterase OS=Cucurbita maxima OX=3661 GN=LOC111468060 PE=4 SV=1)

HSP 1 Score: 138 bits (347), Expect = 2.45e-36
Identity = 72/108 (66.67%), Postives = 85/108 (78.70%), Query Frame = 0


Query: 1   MAFFQLISCFFLCFFNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 60
           M F QL +C F  F N LA+VD   FNA V+LDG+G+FKSI++AIAAAP+NSN RFYI V
Sbjct: 1   MTFLQLAACLFFFFVNVLALVDPIRFNAVVSLDGSGDFKSISEAIAAAPDNSNARFYIHV 60

Query: 61  SSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM 108
           + GIY  HLEI  AKKFIALIG+N  TTIIVDNRS+  GF+TSESAT+
Sbjct: 61  TPGIYRGHLEIPPAKKFIALIGDNALTTIIVDNRSHGTGFKTSESATV 108

[Close]

BLAST of Cp4.1LG15g06300 vs. ExPASy TrEMBL
Match: A0A0A0LR14 (Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_1G049450 PE=4 SV=1)

HSP 1 Score: 135 bits (341), Expect = 3.28e-35
Identity = 67/108 (62.04%), Postives = 83/108 (76.85%), Query Frame = 0


Query: 1   MAFFQLISCFFLCFFNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 60
           M FF  + C   CFFN + ++ S  FN TV+LDG+GNFK I+DAIAAAPNNSNTRFYI V
Sbjct: 1   MLFFFGVPCSLFCFFNLMLLIHSLSFNLTVSLDGSGNFKRISDAIAAAPNNSNTRFYIHV 60

Query: 61  SSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM 108
           + G YHE L+I   KKFIAL+G++ FTTII+DNRSN  GF+T+ SAT+
Sbjct: 61  APGTYHETLQIPRLKKFIALVGDDPFTTIIIDNRSNGTGFKTNNSATL 108

[Close]

BLAST of Cp4.1LG15g06300 vs. TAIR 10
Match: AT3G14310.1 (pectin methylesterase 3 )

HSP 1 Score: 79.3 bits (194), Expect = 3.6e-15
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 27  NATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFIALIGENEF 86
           +ATVA DG+G FK++  A+AAAP NSN R+ I + +G+Y E++E+A  KK I  +G+   
Sbjct: 281 DATVAADGSGTFKTVAAAVAAAPENSNKRYVIHIKAGVYRENVEVAKKKKNIMFMGDGRT 340

Query: 87  TTIIVDNRSNAGGFRTSESATMAKVEE 114
            TII  +R+   G  T  SAT+A V E
Sbjct: 341 RTIITGSRNVVDGSTTFHSATVAAVGE 367

[Close]

BLAST of Cp4.1LG15g06300 vs. TAIR 10
Match: AT4G02300.1 (Plant invertase/pectin methylesterase inhibitor superfamily )

HSP 1 Score: 77.4 bits (189), Expect = 1.4e-14
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 0


Query: 19  AVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFI 78
           A V  T++N +VA+DGTGNF +I DA+ AAPN S TRF I +  G Y E++E+   K  I
Sbjct: 213 APVQETNYNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMI 272

Query: 79  ALIGENEFTTIIVDNRSNAGGFRTSESATM 109
             IG+    T+I  NRS   G+ T ++ T+
Sbjct: 273 MFIGDGIGKTVIKANRSRIDGWSTFQTPTV 302

[Close]

BLAST of Cp4.1LG15g06300 vs. TAIR 10
Match: AT1G11580.1 (methylesterase PCR A )

HSP 1 Score: 75.1 bits (183), Expect = 6.8e-14
Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 27  NATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFIALIGENEF 86
           N  VA DGTG FK++ +A+AAAP NSNTR+ I V  G+Y E ++I   KK + L+G+ + 
Sbjct: 246 NVVVAKDGTGKFKTVNEAVAAAPENSNTRYVIYVKKGVYKETIDIGKKKKNLMLVGDGKD 305

Query: 87  TTIIVDNRSNAGGFRTSESATMA 110
            TII  + +   G  T  SAT+A
Sbjct: 306 ATIITGSLNVIDGSTTFRSATVA 328

[Close]

BLAST of Cp4.1LG15g06300 vs. TAIR 10
Match: AT4G02320.1 (Plant invertase/pectin methylesterase inhibitor superfamily )

HSP 1 Score: 73.9 bits (180), Expect = 1.5e-13
Identity = 41/88 (46.59%), Postives = 54/88 (61.36%), Query Frame = 0


Query: 21  VDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFIAL 80
           VD T  N  VA +GTGN+ +I +AI+AAPN+S TRF I +  G Y E++EI   K  I  
Sbjct: 201 VDETKVNLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMF 260

Query: 81  IGENEFTTIIVDNRSNAGGFRTSESATM 109
           IG+    T+I  NRS A G+    SAT+
Sbjct: 261 IGDGIGRTVIKANRSYADGWTAFHSATV 288

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BLAST of Cp4.1LG15g06300 vs. TAIR 10
Match: AT1G02810.1 (Plant invertase/pectin methylesterase inhibitor superfamily )

HSP 1 Score: 72.4 bits (176), Expect = 4.4e-13
Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 0


Query: 29  TVALDGTGNFKSITDAIAAAPNNSNTR---FYIRVSSGIYHEHLEIASAKKFIALIGENE 88
           TV+ DGTGNF +IT A+AAAPNN++     F I V++GIY E++ IA  K+++ +IG+  
Sbjct: 266 TVSQDGTGNFTNITAAVAAAPNNTDGSAGFFLIYVTAGIYEEYISIAKNKRYMMMIGDGI 325

Query: 89  FTTIIVDNRSNAGGFRTSESATMA 110
             T++  NRS   G+ T  SAT A
Sbjct: 326 NQTVVTGNRSVVDGWTTFNSATFA 349

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g06300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49006	5.1e-14	45.98	Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana OX=3702 GN=PME...	[more]
O81415	1.9e-13	44.44	Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana OX=3...	[more]
Q1JPL7	9.6e-13	45.78	Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana OX=3702 GN=PM...	[more]
O04886	2.1e-12	43.68	Pectinesterase 1 OS=Citrus sinensis OX=2711 GN=PECS-1.1 PE=2 SV=1	[more]
O81301	2.1e-12	46.59	Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Cp4.1LG15g06300 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6572151.1	1.01e-76	37.47	putative pectinesterase/pectinesterase inhibitor 7, partial [Cucurbita argyrospe...	[more]
XP_023554541.1	9.17e-64	100.00	probable pectinesterase/pectinesterase inhibitor 7 isoform X1 [Cucurbita pepo su...	[more]
XP_022952379.1	2.66e-61	97.22	probable pectinesterase/pectinesterase inhibitor 7 isoform X2 [Cucurbita moschat...	[more]
XP_022952377.1	3.33e-61	97.22	probable pectinesterase/pectinesterase inhibitor 7 isoform X1 [Cucurbita moschat...	[more]
XP_023511664.1	2.44e-39	70.37	probable pectinesterase/pectinesterase inhibitor 7 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG15g06300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GLJ0	1.29e-61	97.22	Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111455081 PE=4 SV=1	[more]
A0A6J1GK92	1.61e-61	97.22	Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111455081 PE=4 SV=1	[more]
A0A6J1GM54	6.52e-39	70.37	Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111455508 PE=4 SV=1	[more]
A0A6J1HZD2	2.45e-36	66.67	Pectinesterase OS=Cucurbita maxima OX=3661 GN=LOC111468060 PE=4 SV=1	[more]
A0A0A0LR14	3.28e-35	62.04	Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_1G049450 PE=4 SV=1	[more]

BLAST of Cp4.1LG15g06300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G14310.1	3.6e-15	45.98	pectin methylesterase 3	[more]
AT4G02300.1	1.4e-14	44.44	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT1G11580.1	6.8e-14	45.78	methylesterase PCR A	[more]
AT4G02320.1	1.5e-13	46.59	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT1G02810.1	4.4e-13	46.43	Plant invertase/pectin methylesterase inhibitor superfamily	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 22..131 e-value: 3.7E-22 score: 81.1
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 27..112 e-value: 1.8E-18 score: 66.3
None	No IPR available	PANTHER	PTHR31707:SF218	PECTINESTERASE	coord: 22..108
None	No IPR available	PANTHER	PTHR31707	PECTINESTERASE	coord: 22..108
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 26..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g06300.1	Cp4.1LG15g06300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0045490	pectin catabolic process
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0030599	pectinesterase activity
molecular_function	GO:0046910	pectinesterase inhibitor activity