Cp4.1LG15g05650 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAGGCTCGTTTAGTTTAATCTGCGGCCCTCCAAATTCCTAGGGCTCCTCACTTTCTCAAAATCGGCTTCTGGTTCTACCGAACTCTTTCTTCTTCTCTAATTCGCCTTTGGAAAATCCTTCGATGGCGCTTCCTCCAGGGCCCTATTCTGGAACCAGCACCCTCGCTTTGGTGAGTTTTTGTTGTTTTCCGTGAAAATTTTGTACTGGAGATTAGGAAGAATATCATATGTTGAGAATGCTGTATCCGATTCTGATTTTAGATTCAATAATGGAAATAATTACTCATATTCAATGTTCTTGAGTCTTGGCAGGTTGCTCGTGCTTCGGCGTTTTCTGTTGGACTTGTCTACGGAAGCCTCAAGCTCAAGTATCTTCAGGTTTGTTGCTTCCATTTCCTTCTTTTCGTACTTTCTAGTTTTCCGCTGCAAAATTTTGGTTCGTTGATTTGGAATTGCGTTTCTGGCTTGAATGGTAGTATCTCTAAATTTTCATTTCCGATTGCTCATTTCTGCCAAGAGCATCATAGTGCCACCTGCTATGTATTCATCGGATTCTAGATGTAGAATGTTCTTTTAATGCCATGTTCATATGTTTCTTTTTGGATCAAAATTTAAATTTCTGGAGAACTACTTTGTTATCCATCAAATTCATGTTCATTTTCTTTATCGGAATGCTTTTTCGAGGCTTTGTTATTTAAAATGCCCCTGAGCTTTAAGATTAGTTTCGAAGAAAAAGTTCACTTTTACCCTGACCTTTAAATTTATTCAAATATGCCTCGAAGAATTTGATCTTTACAACGAGTTATGGAATTGTATATGACTGCTTAATTTGATCTTTACAACGAGTTATGGAATTGTATATGACTGCTTAGTTGTAAAATAAACGGCAAAGATGACCAGGACTGATAACCACTATGGAATTGTAGATAGCTTCTTAGAAAATGTCCCAAAACCCGAACTTAATGCCATCAACCATCTCTGGTAGATTTGGTAAGTTCTCTTCTACAATTTGCTGAATTCTTTCACCTTCCATCGAGATGACCCGACCCGAAGCAGCTCTTACTTTTGTTTATGAAACCCATACCTTGAATACAGAAGTTACTCAAATTAGAAATAGAAGTGCGTGGTGGGAAAAGGAGATCTAAAGTCACGATCTCTTTTTAATGAAGAAGGCTCTAAGAAGGGGATAAAGAGGAGTTTGGATCTTTTTTTTTTGTTCTTTCTTGCATTTTGTTCCAAGTATGTGCCCTACTATGGAAGAAGAGTCCTAAAGAAAGAAAAAGGCATCTAATAATCTCATGGATCCTCCAATTCCATTTCAGGTGCCTGATAAATACAGATAGTCATTTATTTATTTTTTAAAAATATTGTCTTCACTATTCTTGAATTTTTTTTTTTTTTTTGGATATGGCCTTAACGTACCACCCTTTCAAGAATGCAAAAGCCTTATTATGGAAAAACCGCATCGAAATCAGAGAATATTTGCAGAAACGACACAGACCTATACAAAACTTTTCGACAATGTTGTTTACCAAGCTATATCTTGGTGTAAACTGTCTGATATTTTTACTTTCTATAGTTATACCTCCCTCATTGCAAATTGGGAAGGTCTTTTGTAAACATCATGGATTATACATCCCTCTTGTAAATTTCACTCACCAATGAAATTGTCTCTTATAAAAAAATAAAAAAAAAACTATACTTGAAATTTAGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAATTGATGCGTTTTCTGATTGCAATTTGTTTCATTGTTTATTTTGATTATTTCATCACAGATTATCATTAATTTATCATTTTGAAATTTAAATTTTAAACATTTTTCTTGGAGCAACTATTTATGCTTTACAACATAGTTGATAAGTATATTAAAGGCTAAAAAATCACTATTGGTCCTTGAATTTTCGTAAAAGGAACAATTTGGGCCTTGAACTTTCAAAGTAACGATTATATCTCTATATTTTGAAAATGGTAACCATTTAGTCCCTTCGTTAAAATTTCTACCATCCTCCAACACATTCTTTAACTTTCTCTTCCATTCCCATCATTTGCTTCCCCTCTTCTTTCAAATTTCTTCAATTATTTGGTGGGTTTGATTTCAAGGGTGGGTATTGTGAGACGAAAGGATGAAGTGGTGGTGCATGCAGCAGACTTTTGTGGGCTGTGTGTTTGATTTCTTCAATTGGACTACCCTACATTGGGGCTTCGTCTTTGTGGGTGAATGCAGTTTTTTTTTTTTGAAAACCTTGCAAAACAATCACCTTGGAAGTGGAGAGCTATGATACAATTGATAATCTCTTCCTTGACACATGAAGTTTGGGGATTCTGAGCCTTTATAGTACAGTAGCTTCCCAGATCTTTCGATTCCCTTCGCTCCAGTGTAAAAAGCTCAGAAAATCTCTGCAGGTTTTGGAATTGTCTGCAAATACTAAAATGAAAGTTCACCTGCTTTCATCCTTCCCAATCAAAATGTCTTAAAGGAAATTTTTGGTTTGGACATTGTTCTCTTCTAGTAACAATTACTTCTGCTCCCAAACTTCAAATGGGAGAAAAAAATTAAACCCACTGTAGAAATGAAGAACTCAAAAGAAGAGGGGAACAAATGTTGAGAAGGGAAGAAAAATTTAACTGAACTGCCGAAGGAAGATAGAAATTTTTAACTGAGGGAATTCTTACAATTTTTAAAGTACAGTGACCAAATTGGTACTTTAGAAAGTTTTGGAGACTAAATTGTTATATTTATAAAAGTTCAGGGACCAATACTGAGTTTTACCTACATTAAATTAGATGGATTGGTCCAAATGTCCAATGCCATGAAAGGATTAATTGTTTTAAATGGGCTATCAAATGTGTGTTAATTTCCATCACTATACTCAATGACGACTATATGATTTATTCACACATTTCTAGTGACATTCCTGTTCAATTTCAGATTAACTTATAATCATTATGATCTACAAATCTCATGTTATTTATCGCTTCTCTTGGGGCCATTCTAAATGCACCTGTCTGATTTTAGAATTATGCTTCAATTCCTATTTTATCACCACAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGAGGTATGGCTGATGATTCTTATCAGCATCAAAATTGAGGCACTGGTTGAATTTTAAAGGGAAATAAATCTATTTTTACTGAACACTCTTTCGTTCCATGTTGCATTAGATGGCTCTATATTTCATTTAGGAGTCATGTAGATGTATCTAACCTCGATCTTAAGGACCATATTTGAGTTACAATTAGTTGATGGATGGATGAGAGGACTGTCTGATCATGATTCCTTTCTTTGATTGAAATCAATAATTTGTTTGTCATCTTCCTTGTTGCAGGTGTTATGTTAATTCATTTATGTTATGCTCATCAGGTATAAGGCTATTGGTAATCCATATTGTCAAGGACGAATAATAGTCTCTCATTAAGTTCATATAATCTATCTCACATGAGCTTATCTTATCATTAGGTTTACTCGGATTTGGATAGTCTAGCTACACTCTTTATTATTCTTTGCAAATGTTTCAAGTTATATATACATATATATAGGTGAGGTCCAATCTCGTAATCGTAGTACATACACGAATCTTGTCAATCTAGACCCTTTACTATG TTAGGCTCGTTTAGTTTAATCTGCGGCCCTCCAAATTCCTAGGGCTCCTCACTTTCTCAAAATCGGCTTCTGGTTCTACCGAACTCTTTCTTCTTCTCTAATTCGCCTTTGGAAAATCCTTCGATGGCGCTTCCTCCAGGGCCCTATTCTGGAACCAGCACCCTCGCTTTGGTTGCTCGTGCTTCGGCGTTTTCTGTTGGACTTGTCTACGGAAGCCTCAAGCTCAAGTATCTTCAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGAGGTATGGCTGATGATTCTTATCAGCATCAAAATTGAGGCACTGGTTGAATTTTAAAGGGAAATAAATCTATTTTTACTGAACACTCTTTCGTTCCATGTTGCATTAGATGGCTCTATATTTCATTTAGGAGTCATGTAGATGTATCTAACCTCGATCTTAAGGACCATATTTGAGTTACAATTAGTTGATGGATGGATGAGAGGACTGTCTGATCATGATTCCTTTCTTTGATTGAAATCAATAATTTGTTTGTCATCTTCCTTGTTGCAGGTGTTATGTTAATTCATTTATGTTATGCTCATCAGGTATAAGGCTATTGGTAATCCATATTGTCAAGGACGAATAATAGTCTCTCATTAAGTTCATATAATCTATCTCACATGAGCTTATCTTATCATTAGGTTTACTCGGATTTGGATAGTCTAGCTACACTCTTTATTATTCTTTGCAAATGTTTCAAGTTATATATACATATATATAGGTGAGGTCCAATCTCGTAATCGTAGTACATACACGAATCTTGTCAATCTAGACCCTTTACTATG ATGGCGCTTCCTCCAGGGCCCTATTCTGGAACCAGCACCCTCGCTTTGGTTGCTCGTGCTTCGGCGTTTTCTGTTGGACTTGTCTACGGAAGCCTCAAGCTCAAGTATCTTCAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGA MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH Homology
BLAST of Cp4.1LG15g05650 vs. NCBI nr
Match: XP_038887516.1 (uncharacterized protein LOC120077638 [Benincasa hispida] >KGN43194.1 hypothetical protein Csa_020535 [Cucumis sativus]) HSP 1 Score: 102 bits (255), Expect = 2.14e-27 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of Cp4.1LG15g05650 vs. NCBI nr
Match: KAG7022252.1 (hypothetical protein SDJN02_15983 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 101 bits (251), Expect = 8.75e-27 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of Cp4.1LG15g05650 vs. NCBI nr
Match: XP_022952755.1 (uncharacterized protein LOC111455357 [Cucurbita moschata]) HSP 1 Score: 101 bits (251), Expect = 8.75e-27 Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of Cp4.1LG15g05650 vs. NCBI nr
Match: XP_030478880.1 (uncharacterized protein LOC115695925 [Cannabis sativa]) HSP 1 Score: 99.8 bits (247), Expect = 3.57e-26 Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of Cp4.1LG15g05650 vs. NCBI nr
Match: XP_022136306.1 (uncharacterized protein LOC111008022 [Momordica charantia]) HSP 1 Score: 99.4 bits (246), Expect = 5.07e-26 Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0
BLAST of Cp4.1LG15g05650 vs. ExPASy TrEMBL
Match: A0A0A0K2E7 (ATP synthase subunit e, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_7G007920 PE=3 SV=1) HSP 1 Score: 102 bits (255), Expect = 1.04e-27 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of Cp4.1LG15g05650 vs. ExPASy TrEMBL
Match: A0A6J1GMM8 (ATP synthase subunit e, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111455357 PE=3 SV=1) HSP 1 Score: 101 bits (251), Expect = 4.23e-27 Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of Cp4.1LG15g05650 vs. ExPASy TrEMBL
Match: A0A6J1C358 (ATP synthase subunit e, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111008022 PE=3 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 2.46e-26 Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0
BLAST of Cp4.1LG15g05650 vs. ExPASy TrEMBL
Match: A0A7J6FXI7 (ATP synthase subunit e, mitochondrial OS=Cannabis sativa OX=3483 GN=F8388_024057 PE=3 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 5.21e-26 Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of Cp4.1LG15g05650 vs. ExPASy TrEMBL
Match: A0A7J6GZJ8 (ATP synthase subunit e, mitochondrial OS=Cannabis sativa OX=3483 GN=G4B88_013239 PE=3 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 5.21e-26 Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of Cp4.1LG15g05650 vs. TAIR 10
Match: AT3G01130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 72.0 bits (175), Expect = 1.6e-13 Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 0
BLAST of Cp4.1LG15g05650 vs. TAIR 10
Match: AT5G15320.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 72.0 bits (175), Expect = 1.6e-13 Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 0
BLAST of Cp4.1LG15g05650 vs. TAIR 10
Match: AT5G15320.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 1.5e-11 Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 0
BLAST of Cp4.1LG15g05650 vs. TAIR 10
Match: AT3G01130.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 58.2 bits (139), Expect = 2.4e-09 Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|