Cp4.1LG15g05350 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g05350
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ras-related protein Rab7
Location	Cp4.1LG15: 6222067 .. 6226394 (-)
RNA-Seq Expression	Cp4.1LG15g05350
Synteny	Cp4.1LG15g05350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTGAAGAAAAATAAAAAGAATGGGGAAATGAAATGGAATAATTCATTGTTTTCCCATTCACAGATCACTACAGCTTGGCTTCGTCTTCTGATCAGAGAGAGAGAGAGACCAGAAGCCTCTCTTCTTCTTCTTCATCAATTCTCTCTGTATCTCTCTCGCTCTCTTTCAAGTTTCAATTGATTGAATTGATCTTCGTTCCCTTACGATGCCTTCCCGAAGAAGGACCCTCTTGAAGGTCATCATCCTTGGGGATAGCGGGTGAGAATCAACTGTTCTTCTCTTTCTCTTTTCCAATTTTGCTTTTGAGGTTACTGCCCTTTCTCTTTAATACTCAACGGATCGACTCAGATCGTTACTTTCCGAACTTGCGGAATTTTCTTTTGTCAGTTCTTGGCCTTTGATCTGGAACGGATTCAATGGGGCTTTAAGATTCTGTTTGCTCGGATTTAGATTGTTTGATGAAGTTATATGTTCTTGCTTCTTTTTATTCACCAGTTGATGGTTGTTAGTAGTGATTGGTTCTTGTTTTTGTTGGGAGAACTCGCTTTGTGGCTTACTTTCTATTTTTGGGCTTTTTTGGTTTACTTTTTGGAAATTGACTTTTGTCTTTGGCTGGTATTGAAGGTTCTGATTCGGGGAACTGACATGTTTGGATCTGTTTGTTGTGTTTTAATTTGTTCCTTCTCTACTGTATGGTAATTTGAAGCTTGTTTGTGAACTTGCAGGGTTGGGAAGACCTCTTTGATGAACCAGTATCCTACTTGATTGTTGAATTAACAATGTTATAGTGTACCATTTTCCATTGAAGATATTGATTCGAGTTTCTTTTTTTGTGACAATTCTTCTATTTTATAGAAGAACAGTTTCTTGATCCTCCGTGTGGTTTCTTTGAACTTTTAAAAACAGATATGTAAATAAGAAGTTTAGTAATCAATACAAGGCCACCATTGGAGCTGATTTTTTGACTAAAGAGGTGCAATTCGAAGATAGACTTTTCACTTTGCAGGTTGGTGATGGGGAAACTTCTATTTGCCTATGCACATGTTTTTATTAGATTAGGAGAATTGTCTTAAATTTGATCCGATAAAAACTGCACAAAAAATGTGAGATCCTACATCAGTTGGGGAGGAGAACGAAATATTCTTTATAAGGGTGTAGAAACCTCTTCTTAACAGACGTGTTTTAAAAACTTTGAGAGGAAGCCTGAAAGGGAAAACCCAAAGAGGACAATTTCTGCTCGTTGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCCAGACACCGAGCAATGTGTCAGCAAGGAGGCTGAGCCCCGAAGGGGGGCAGACATCGATGGAAGAAGGGAACAAATGCCGGCGAGGACGCTGGGTTATGAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGGAAGGAGAACGAAGCATTCCTTATAAGGGTGTGGAAATCTCTCCCTAGCAGACGTGTCATAAAAACCTAGAGGGGAAGCTCGAAAAGGAAAACCCAAAGAGAACAATATCTGCTTGCGGTAGGCTTGGGCTATTACAAAAAGCACTTCACCTCAGTATACTGTGTAGTGTTTCAGACTTGGATTATTTGAAAAAACTACATAATTTCCTTGGGCTTCGTCTATTGTAGGGAAAATATGTATGAACTTAATCAATCCATCTGGGAAAATATGAATTTCTTGAATGATATTTTGAAAATGATAGCTGTGTCTTAATCCTTTATAATGAGCAAGAACTTGGCAATGGAGGCTGCATCTTCTCATGTAAGGGACTCAGTTGAACCTTCAATCTTTAGATAATGACATCCCATTGCCTTACAGATATGGGATACAGCAGGCCAGGAACGATTCCAAAGTCTTGGTGTTGCTTTTTACAGAGGTGCTGATTGCTGCGTTCTGGTGTATGATGTCAATTCAATGAAATCATTTGACAACCTTAACAACTGGCGGGAAGAATTCCTTATCCAGGTTCTGTTCTCTATGTTCATGAACTATAATCTTGTTACCAGAAACTGATTTACAGAAGAGTTCAAATAAGTTCAAAAGATAATAGAAAACCTGAACTTCTTTTGATGCTTTGGCATAACATCATCTGCAGGCGAGCCCTTCCGATCCCGAAAATTTTCCCTTCGTTGTTCTAGGAAATAAAGTTGACATAGATGGTGGAAACAGTAGAGTTGTAAGTATTACCTAAATTTCAGTATTGAATCATGTTCTCTTTCTACATTCAGAAGATTGTAAGCTGAAATTTTCTGTTTTTCGGAATACTTCAGGTTTCGGAGAAAAAGGCACGAGCTTGGTGTGCATCGAAAGGAAACATCCCATACTTTGAAACTTCTGCCAAAGAAGGCATTAATGTGGAAGAAGCCTTCGAATGCATTGCAAAAAATGCCCTCAAGAGTGGGGAAGAGGAAGAGATGTAAGTTCATATGCCAAACCAAATATTACTAACTCAGTCTCTCATTTTCTATTCTCAGTTATTTGTTGTACATGTGCATAAAATAGGAATTCATTGTTAGCTACATTTCACCAAGCAAAATAACTTATCAATTTCCACATCTGCACGAACTCGACGTGATAAGGGTTTCGGTTGGGGATATTTCACCTAGTTTTGTTGTTTCCCAAGCTGTGTCGCACGCCGTAGAAGTGAACAATGTGTGCAGGATCCGAATCCTCTATCCTATACCTTATAGAAAACGAATAGACGAATTAAGGTTTAGATCTAGCAATGGATTTAGTTAGTAGTTTTTGACCTGAGGCTGTGGATATGTAGAATCTAGCTCGTCCTAAATGGCTGTATTTTCTAACTTCCTTTGTTTCGAACTTTCTTCGTCCATGCTTTGTTGGTTTCTACTCTCCTGGCTATTAACTTTGCTTTCACAAAACCTTTTCGATTAATGGTTGCGATGGTGTACCGCAGATACTTACCCGACACCATCGATGTTGCGAGGAACAATCAGCCAAGATCATCTGGATGCGACTGCTGAGTTTAATACACTGAATCACCTCTTATTCTATTTCATTCTCCAGTAAATCTCAAGTCTTCTATAAAGGTCCTACAGACTCAGGCTTTTTATGCATATTCCGATTTGTACATTTGGCTTTGCATTTGAACAAATCCTGTCATTATCGACTCAGTTTGTGTTTGGTCGTTGCAAGTTGTGTTTACTGTCGTAGGGGTTTATAAATTATCCATCTCGTGACCGACTCTATGCCTGAGCCTCATTTGTTGATGACAATCAGTTTGTCGCATAAGTTTATGTAATTCTTCTTCTTAGTGAACGTATTGATTCTTGTTTATTTGCTAGGATTTTGGTTCCTCTGTTCATGCTTCAATATATTTTAGATCTTCAGCCTGGATAGTTTCTGCAATGGTCACAATTATAACTCATTTGTTAAACTATAATATGATCATATGGCTACGAAATGTCCAATAGAAAGATTTTGAACTATAATATGATCATATGGCTGTTCAGAATACAAAAGGACAATAAAGTCTGGCAGGCTGAATTAGATTCTTTTTCCTTCCAAATTTAAAACTGTTCCTGGTTGAATATAATACAACATTCAAATCAAATTGGTTACACAGTAAACTGAAGTGAACTCTACTGTATTAAAATGGTTGCGATCTCAACCTGCAAGCTAATATTGATTTACTTTGACCCAACAGAAGAAAGTGTGTCCTGATTTGCAGGGCGAAATGAACTCCCAGAAATTGTTGTACTGGTTGTTGGGTATTGGGGGTTAGGGTTAGAAGCAGGCATACCCGGCAGTCCCGACATCGGAGGCCTTTGGGGCACCATGCCCATTGGAGGCCTTGGGACTGTGTTTGCAAAGTTCATGGGCATCCTGTTTGTTGGTAATGTTGGTGCCCCACCTCGTGATGATGAAGCAGGTAAGCCTAGTCGAGCAGCGATTATCTGTGCACGTTCCTGGAAAAGCCTCTGCTTTGACCTGTCTAGTTGCTCCCTCATTCTCACCGTCACGTTTTCCATGTCGTTGAAGAATGCTAACTTGCTTTCCAACTTATGCAGCTATAAAAAAGAGAGGGTAGTGTAAGTTTTTGTTTAATTGTTTAAAATGTATGGGAAGGGAAACAACTTCAATTGAGATACCTGTTTTTCGATTAATATCATGGAAAGTTGACGGATTTGGTCCTCTTCTTGATTAGCCAGAATTTGTGCCTTCACTGCTGCTGCTGACAGTGTCGTAACCGCAGCACGCTTCAACTTATCGATTTTATCCTCCTTTTTACTCGTACAATTGGAGTTTTCTTCTTTGTTGTCCTTGCTTTGATTAACATCTGCTAAAGAACAAATA

mRNA sequence

TATTGAAGAAAAATAAAAAGAATGGGGAAATGAAATGGAATAATTCATTGTTTTCCCATTCACAGATCACTACAGCTTGGCTTCGTCTTCTGATCAGAGAGAGAGAGAGACCAGAAGCCTCTCTTCTTCTTCTTCATCAATTCTCTCTGTATCTCTCTCGCTCTCTTTCAAGTTTCAATTGATTGAATTGATCTTCGTTCCCTTACGATGCCTTCCCGAAGAAGGACCCTCTTGAAGGTCATCATCCTTGGGGATAGCGGGGTTGGGAAGACCTCTTTGATGAACCAATATGTAAATAAGAAGTTTAGTAATCAATACAAGGCCACCATTGGAGCTGATTTTTTGACTAAAGAGGTGCAATTCGAAGATAGACTTTTCACTTTGCAGATATGGGATACAGCAGGCCAGGAACGATTCCAAAGTCTTGGTGTTGCTTTTTACAGAGGTGCTGATTGCTGCGTTCTGGTGTATGATGTCAATTCAATGAAATCATTTGACAACCTTAACAACTGGCGGGAAGAATTCCTTATCCAGGCGAGCCCTTCCGATCCCGAAAATTTTCCCTTCGTTGTTCTAGGAAATAAAGTTGACATAGATGGTGGAAACAGTAGAGTTGTTTCGGAGAAAAAGGCACGAGCTTGGTGTGCATCGAAAGGAAACATCCCATACTTTGAAACTTCTGCCAAAGAAGGCATTAATGTGGAAGAAGCCTTCGAATGCATTGCAAAAAATGCCCTCAAGAGTGGGGAAGAGGAAGAGATATACTTACCCGACACCATCGATGTTGCGAGGAACAATCAGCCAAGATCATCTGGATGCGACTGCTGAGTTTAATACACTGAATCACCTCTTATTCTATTTCATTCTCCAGTAAATCTCAAGTCTTCTATAAAGGTCCTACAGACTCAGGCTTTTTATGCATATTCCGATTTGTACATTTGGCTTTGCATTTGAACAAATCCTGTCATTATCGACTCAGTTTGTGTTTGGTCGTTGCAAGTTGTGTTTACTGTCGTAGGGGTTTATAAATTATCCATCTCGTGACCGACTCTATGCCTGAGCCTCATTTGTTGATGACAATCAGTTTGTCGCATAAGTTTATGTAATTCTTCTTCTTAGTGAACGTATTGATTCTTGTTTATTTGCTAGGATTTTGGTTCCTCTGTTCATGCTTCAATATATTTTAGATCTTCAGCCTGGATAGTTTCTGCAATGGTCACAATTATAACTCATTTGTTAAACTATAATATGATCATATGGCTACGAAATGTCCAATAGAAAGATTTTGAACTATAATATGATCATATGGCTGTTCAGAATACAAAAGGACAATAAAGTCTGGCAGGCTGAATTAGATTCTTTTTCCTTCCAAATTTAAAACTGTTCCTGGTTGAATATAATACAACATTCAAATCAAATTGGTTACACAGTAAACTGAAGTGAACTCTACTGTATTAAAATGGTTGCGATCTCAACCTGCAAGCTAATATTGATTTACTTTGACCCAACAGAAGAAAGTGTGTCCTGATTTGCAGGGCGAAATGAACTCCCAGAAATTGTTGTACTGGTTGTTGGGTATTGGGGGTTAGGGTTAGAAGCAGGCATACCCGGCAGTCCCGACATCGGAGGCCTTTGGGGCACCATGCCCATTGGAGGCCTTGGGACTGTGTTTGCAAAGTTCATGGGCATCCTGTTTGTTGGTAATGTTGGTGCCCCACCTCGTGATGATGAAGCAGGTAAGCCTAGTCGAGCAGCGATTATCTGTGCACGTTCCTGGAAAAGCCTCTGCTTTGACCTGTCTAGTTGCTCCCTCATTCTCACCGTCACGTTTTCCATGTCGTTGAAGAATGCTAACTTGCTTTCCAACTTATGCAGCTATAAAAAAGAGAGGGTAGTGTAAGTTTTTGTTTAATTGTTTAAAATGTATGGGAAGGGAAACAACTTCAATTGAGATACCTGTTTTTCGATTAATATCATGGAAAGTTGACGGATTTGGTCCTCTTCTTGATTAGCCAGAATTTGTGCCTTCACTGCTGCTGCTGACAGTGTCGTAACCGCAGCACGCTTCAACTTATCGATTTTATCCTCCTTTTTACTCGTACAATTGGAGTTTTCTTCTTTGTTGTCCTTGCTTTGATTAACATCTGCTAAAGAACAAATA

Coding sequence (CDS)

ATGCCTTCCCGAAGAAGGACCCTCTTGAAGGTCATCATCCTTGGGGATAGCGGGGTTGGGAAGACCTCTTTGATGAACCAATATGTAAATAAGAAGTTTAGTAATCAATACAAGGCCACCATTGGAGCTGATTTTTTGACTAAAGAGGTGCAATTCGAAGATAGACTTTTCACTTTGCAGATATGGGATACAGCAGGCCAGGAACGATTCCAAAGTCTTGGTGTTGCTTTTTACAGAGGTGCTGATTGCTGCGTTCTGGTGTATGATGTCAATTCAATGAAATCATTTGACAACCTTAACAACTGGCGGGAAGAATTCCTTATCCAGGCGAGCCCTTCCGATCCCGAAAATTTTCCCTTCGTTGTTCTAGGAAATAAAGTTGACATAGATGGTGGAAACAGTAGAGTTGTTTCGGAGAAAAAGGCACGAGCTTGGTGTGCATCGAAAGGAAACATCCCATACTTTGAAACTTCTGCCAAAGAAGGCATTAATGTGGAAGAAGCCTTCGAATGCATTGCAAAAAATGCCCTCAAGAGTGGGGAAGAGGAAGAGATATACTTACCCGACACCATCGATGTTGCGAGGAACAATCAGCCAAGATCATCTGGATGCGACTGCTGA

Protein sequence

MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSGEEEEIYLPDTIDVARNNQPRSSGCDC

Homology

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BLAST of Cp4.1LG15g05350 vs. ExPASy Swiss-Prot
Match: P31022 (Ras-related protein Rab7 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 4.8e-111
Identity = 191/206 (92.72%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNS+KSFDNLNNWREEFLIQA+PSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSVKSFDNLNNWREEFLIQANPSDPENFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           VV+GNK+DIDGGNSRVVSEKKARAWCA+KGNIPYFETSAKEGINVEEAF+ IAK+ALKSG
Sbjct: 121 VVIGNKIDIDGGNSRVVSEKKARAWCAAKGNIPYFETSAKEGINVEEAFQTIAKDALKSG 180

Query: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 207
           EEEE+YLPDTIDV  ++QPRS+GC+C
Sbjct: 181 EEEELYLPDTIDVGNSSQPRSTGCEC 206

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BLAST of Cp4.1LG15g05350 vs. ExPASy Swiss-Prot
Match: Q9LS94 (Ras-related protein RABG3f OS=Arabidopsis thaliana OX=3702 GN=RABG3F PE=1 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 1.6e-109
Identity = 189/206 (91.75%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSF+NLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           V++GNKVD+D GNSRVVSEKKA+AWCASKGNIPYFETSAK G NVEEAF+CIAK+ALKSG
Sbjct: 121 VLIGNKVDVDDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKSG 180

Query: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 207
           EEEE+YLPDTIDV  +NQ RS+GC+C
Sbjct: 181 EEEELYLPDTIDVGTSNQQRSTGCEC 206

[Close]

BLAST of Cp4.1LG15g05350 vs. ExPASy Swiss-Prot
Match: Q9XI98 (Ras-related protein RABG3e OS=Arabidopsis thaliana OX=3702 GN=RABG3E PE=2 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 3.6e-106
Identity = 183/206 (88.83%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF++LNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           VV+GNK+D+DGG+SRVVSEKKARAWCASKGNIPY+ETSAK G NVE+AF CI  NA+KSG
Sbjct: 121 VVIGNKIDVDGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCITTNAMKSG 180

Query: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 207
           EEEE+YLPDTIDV  +N  RS+GC+C
Sbjct: 181 EEEEMYLPDTIDVGTSNPQRSTGCEC 206

[Close]

BLAST of Cp4.1LG15g05350 vs. ExPASy Swiss-Prot
Match: Q40787 (Ras-related protein Rab7 OS=Cenchrus ciliaris OX=35872 PE=2 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 5.2e-105
Identity = 184/205 (89.76%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           V+LGNKVD+DGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NVE+AF+CI KNALK+ 
Sbjct: 121 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGTNVEDAFQCIVKNALKNE 180

Query: 181 EEEEIYLPDTIDVARNNQ-PRSSGC 205
            EEE+Y+PDT+DV   N+  RSSGC
Sbjct: 181 PEEELYVPDTVDVVGGNRAQRSSGC 205

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BLAST of Cp4.1LG15g05350 vs. ExPASy Swiss-Prot
Match: Q9XER8 (Ras-related protein Rab7 OS=Gossypium hirsutum OX=3635 GN=RAB7 PE=2 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 8.8e-105
Identity = 184/207 (88.89%), Postives = 196/207 (94.69%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQF+DRLFTLQ
Sbjct: 1   MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFDDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLV+DVN MKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           VVLGNKVD+DGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NV+ AFECIA+NALK+ 
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECIARNALKNE 180

Query: 181 EEEEIYLPDTIDVARNNQP-RSSGCDC 207
            EEEIYLP+TIDVA   +P RS+GC+C
Sbjct: 181 PEEEIYLPETIDVASGGRPQRSTGCEC 207

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BLAST of Cp4.1LG15g05350 vs. NCBI nr
Match: XP_022952328.1 (ras-related protein Rab7 [Cucurbita moschata] >XP_022972496.1 ras-related protein Rab7 [Cucurbita maxima] >XP_023553958.1 ras-related protein Rab7 [Cucurbita pepo subsp. pepo] >KAG6572030.1 hypothetical protein SDJN03_28758, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011699.1 hypothetical protein SDJN02_26605 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 422 bits (1084), Expect = 5.91e-149
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG
Sbjct: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180

Query: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 206
           EEEEIYLPDTIDVARNNQPRSSGCDC
Sbjct: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 206

[Close]

BLAST of Cp4.1LG15g05350 vs. NCBI nr
Match: XP_022971474.1 (ras-related protein Rab7-like [Cucurbita maxima])

HSP 1 Score: 417 bits (1071), Expect = 5.68e-147
Identity = 203/206 (98.54%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           VVLGNKVD+DGGNSRVVSEKKARAWCA KGNIPYFETSAKEGINVEEAFECIAKNALKSG
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKARAWCALKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180

Query: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 206
           EEEEIYLPDTIDVA NNQPRSSGCDC
Sbjct: 181 EEEEIYLPDTIDVATNNQPRSSGCDC 206

[Close]

BLAST of Cp4.1LG15g05350 vs. NCBI nr
Match: NP_001269169.1 (ras-related protein Rab-7b [Cucumis sativus] >XP_008447038.1 PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab7-like [Cucumis melo] >XP_022136134.1 ras-related protein Rab7 [Momordica charantia] >XP_031744185.1 ras-related protein Rab-7b isoform X1 [Cucumis sativus] >XP_031744186.1 ras-related protein Rab-7b isoform X1 [Cucumis sativus] >TYK22620.1 ras-related protein Rab7 [Cucumis melo var. makuwa] >AAQ72787.1 putative GTP-binding protein [Cucumis sativus] >KGN44346.1 hypothetical protein Csa_016435 [Cucumis sativus])

HSP 1 Score: 416 bits (1070), Expect = 8.07e-147
Identity = 202/206 (98.06%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           VVLGNKVD+DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF+CIAKNALKSG
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180

Query: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 206
           EEEEIYLPDTIDV  NNQPRSSGCDC
Sbjct: 181 EEEEIYLPDTIDVGSNNQPRSSGCDC 206

[Close]

BLAST of Cp4.1LG15g05350 vs. NCBI nr
Match: XP_022931294.1 (ras-related protein RABG3f [Cucurbita moschata] >KAG6588442.1 Ras-related protein RABG3f, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 416 bits (1069), Expect = 1.15e-146
Identity = 203/206 (98.54%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           VVLGNKVD+DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180

Query: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 206
           EEEEIYLPDTIDVA NNQ RSSGCDC
Sbjct: 181 EEEEIYLPDTIDVATNNQSRSSGCDC 206

[Close]

BLAST of Cp4.1LG15g05350 vs. NCBI nr
Match: XP_023529452.1 (ras-related protein RABG3f isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 416 bits (1068), Expect = 1.63e-146
Identity = 203/206 (98.54%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           VVLGNKVD+DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180

Query: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 206
           EEEEIYLPDTIDVA NNQ RSSGCDC
Sbjct: 181 EEEEIYLPDTIDVATNNQRRSSGCDC 206

[Close]

BLAST of Cp4.1LG15g05350 vs. ExPASy TrEMBL
Match: A0A6J1I650 (ras-related protein Rab7 OS=Cucurbita maxima OX=3661 GN=LOC111471043 PE=4 SV=1)

HSP 1 Score: 422 bits (1084), Expect = 2.86e-149
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG
Sbjct: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180

Query: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 206
           EEEEIYLPDTIDVARNNQPRSSGCDC
Sbjct: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 206

[Close]

BLAST of Cp4.1LG15g05350 vs. ExPASy TrEMBL
Match: A0A6J1GK85 (ras-related protein Rab7 OS=Cucurbita moschata OX=3662 GN=LOC111455038 PE=4 SV=1)

HSP 1 Score: 422 bits (1084), Expect = 2.86e-149
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG
Sbjct: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180

Query: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 206
           EEEEIYLPDTIDVARNNQPRSSGCDC
Sbjct: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 206

[Close]

BLAST of Cp4.1LG15g05350 vs. ExPASy TrEMBL
Match: A0A6J1I8N5 (ras-related protein Rab7-like OS=Cucurbita maxima OX=3661 GN=LOC111470179 PE=4 SV=1)

HSP 1 Score: 417 bits (1071), Expect = 2.75e-147
Identity = 203/206 (98.54%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           VVLGNKVD+DGGNSRVVSEKKARAWCA KGNIPYFETSAKEGINVEEAFECIAKNALKSG
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKARAWCALKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180

Query: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 206
           EEEEIYLPDTIDVA NNQPRSSGCDC
Sbjct: 181 EEEEIYLPDTIDVATNNQPRSSGCDC 206

[Close]

BLAST of Cp4.1LG15g05350 vs. ExPASy TrEMBL
Match: Q6UNT4 (Putative GTP-binding protein OS=Cucumis sativus OX=3659 GN=Rab7b PE=2 SV=1)

HSP 1 Score: 416 bits (1070), Expect = 3.91e-147
Identity = 202/206 (98.06%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           VVLGNKVD+DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF+CIAKNALKSG
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180

Query: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 206
           EEEEIYLPDTIDV  NNQPRSSGCDC
Sbjct: 181 EEEEIYLPDTIDVGSNNQPRSSGCDC 206

[Close]

BLAST of Cp4.1LG15g05350 vs. ExPASy TrEMBL
Match: A0A5D3DGZ7 (Ras-related protein Rab7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00470 PE=4 SV=1)

HSP 1 Score: 416 bits (1070), Expect = 3.91e-147
Identity = 202/206 (98.06%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           VVLGNKVD+DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF+CIAKNALKSG
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180

Query: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 206
           EEEEIYLPDTIDV  NNQPRSSGCDC
Sbjct: 181 EEEEIYLPDTIDVGSNNQPRSSGCDC 206

[Close]

BLAST of Cp4.1LG15g05350 vs. TAIR 10
Match: AT3G18820.1 (RAB GTPase homolog G3F )

HSP 1 Score: 396.7 bits (1018), Expect = 1.1e-110
Identity = 189/206 (91.75%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSF+NLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           V++GNKVD+D GNSRVVSEKKA+AWCASKGNIPYFETSAK G NVEEAF+CIAK+ALKSG
Sbjct: 121 VLIGNKVDVDDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKSG 180

Query: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 207
           EEEE+YLPDTIDV  +NQ RS+GC+C
Sbjct: 181 EEEELYLPDTIDVGTSNQQRSTGCEC 206

[Close]

BLAST of Cp4.1LG15g05350 vs. TAIR 10
Match: AT1G49300.1 (RAB GTPase homolog G3E )

HSP 1 Score: 385.6 bits (989), Expect = 2.5e-107
Identity = 183/206 (88.83%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF++LNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           VV+GNK+D+DGG+SRVVSEKKARAWCASKGNIPY+ETSAK G NVE+AF CI  NA+KSG
Sbjct: 121 VVIGNKIDVDGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCITTNAMKSG 180

Query: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 207
           EEEE+YLPDTIDV  +N  RS+GC+C
Sbjct: 181 EEEEMYLPDTIDVGTSNPQRSTGCEC 206

[Close]

BLAST of Cp4.1LG15g05350 vs. TAIR 10
Match: AT1G49300.2 (RAB GTPase homolog G3E )

HSP 1 Score: 385.6 bits (989), Expect = 2.5e-107
Identity = 183/206 (88.83%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF++LNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           VV+GNK+D+DGG+SRVVSEKKARAWCASKGNIPY+ETSAK G NVE+AF CI  NA+KSG
Sbjct: 121 VVIGNKIDVDGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCITTNAMKSG 180

Query: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 207
           EEEE+YLPDTIDV  +N  RS+GC+C
Sbjct: 181 EEEEMYLPDTIDVGTSNPQRSTGCEC 206

[Close]

BLAST of Cp4.1LG15g05350 vs. TAIR 10
Match: AT1G52280.1 (RAB GTPase homolog G3D )

HSP 1 Score: 374.4 bits (960), Expect = 5.9e-104
Identity = 179/206 (86.89%), Postives = 189/206 (91.75%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           M SRRR LLKVIILGDSGVGKTSLMNQ+VN+KFSNQYKATIGADFLTKEVQ +DR+FTLQ
Sbjct: 1   MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           VVLGNK D+DGG SRVVSEKKA+AWCASKGNIPYFETSAKEG NV+ AFECI KNA K+ 
Sbjct: 121 VVLGNKTDVDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECITKNAFKNE 180

Query: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 207
            EEE YLPDTIDVA   Q RS+GC+C
Sbjct: 181 PEEEPYLPDTIDVAGGQQQRSTGCEC 206

[Close]

BLAST of Cp4.1LG15g05350 vs. TAIR 10
Match: AT3G16100.1 (RAB GTPase homolog G3C )

HSP 1 Score: 371.7 bits (953), Expect = 3.8e-103
Identity = 176/206 (85.44%), Postives = 192/206 (93.20%), Query Frame = 0


Query: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           M SRRR LLKVIILGDSGVGKTSLMNQ+VN+KFSNQYKATIGADFLTKEVQ +DR+FTLQ
Sbjct: 1   MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLV DVN MKSF+NLNNWREEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSG 180
           VVLGNK D+DGG SRVV+EKKA++WCASKGNIPYFETSAK+G+NV+ AFECIAKNALK+ 
Sbjct: 121 VVLGNKTDVDGGKSRVVTEKKAKSWCASKGNIPYFETSAKDGVNVDAAFECIAKNALKNE 180

Query: 181 EEEEIYLPDTIDVARNNQPRSSGCDC 207
            EEE+YLPDTIDVA   Q RS+GC+C
Sbjct: 181 PEEEVYLPDTIDVAGARQQRSTGCEC 206

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g05350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31022	4.8e-111	92.72	Ras-related protein Rab7 OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
Q9LS94	1.6e-109	91.75	Ras-related protein RABG3f OS=Arabidopsis thaliana OX=3702 GN=RABG3F PE=1 SV=1	[more]
Q9XI98	3.6e-106	88.83	Ras-related protein RABG3e OS=Arabidopsis thaliana OX=3702 GN=RABG3E PE=2 SV=1	[more]
Q40787	5.2e-105	89.76	Ras-related protein Rab7 OS=Cenchrus ciliaris OX=35872 PE=2 SV=1	[more]
Q9XER8	8.8e-105	88.89	Ras-related protein Rab7 OS=Gossypium hirsutum OX=3635 GN=RAB7 PE=2 SV=1	[more]

BLAST of Cp4.1LG15g05350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952328.1	5.91e-149	100.00	ras-related protein Rab7 [Cucurbita moschata] >XP_022972496.1 ras-related protei...	[more]
XP_022971474.1	5.68e-147	98.54	ras-related protein Rab7-like [Cucurbita maxima]	[more]
NP_001269169.1	8.07e-147	98.06	ras-related protein Rab-7b [Cucumis sativus] >XP_008447038.1 PREDICTED: LOW QUAL...	[more]
XP_022931294.1	1.15e-146	98.54	ras-related protein RABG3f [Cucurbita moschata] >KAG6588442.1 Ras-related protei...	[more]
XP_023529452.1	1.63e-146	98.54	ras-related protein RABG3f isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG15g05350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I650	2.86e-149	100.00	ras-related protein Rab7 OS=Cucurbita maxima OX=3661 GN=LOC111471043 PE=4 SV=1	[more]
A0A6J1GK85	2.86e-149	100.00	ras-related protein Rab7 OS=Cucurbita moschata OX=3662 GN=LOC111455038 PE=4 SV=1	[more]
A0A6J1I8N5	2.75e-147	98.54	ras-related protein Rab7-like OS=Cucurbita maxima OX=3661 GN=LOC111470179 PE=4 S...	[more]
Q6UNT4	3.91e-147	98.06	Putative GTP-binding protein OS=Cucumis sativus OX=3659 GN=Rab7b PE=2 SV=1	[more]
A0A5D3DGZ7	3.91e-147	98.06	Ras-related protein Rab7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of Cp4.1LG15g05350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18820.1	1.1e-110	91.75	RAB GTPase homolog G3F	[more]
AT1G49300.1	2.5e-107	88.83	RAB GTPase homolog G3E	[more]
AT1G49300.2	2.5e-107	88.83	RAB GTPase homolog G3E	[more]
AT1G52280.1	5.9e-104	86.89	RAB GTPase homolog G3D	[more]
AT3G16100.1	3.8e-103	85.44	RAB GTPase homolog G3C	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 9..30 score: 44.25 coord: 154..176 score: 43.46 coord: 32..48 score: 35.89 coord: 50..72 score: 47.03 coord: 116..129 score: 40.73
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 9..179 e-value: 4.1E-95 score: 332.0
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 14..206 e-value: 8.9E-6 score: 32.6
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 6..179 e-value: 1.3E-26 score: 104.4
None	No IPR available	PANTHER	PTHR47981:SF4	RAS-RELATED PROTEIN RABG3F	coord: 1..206
None	No IPR available	PANTHER	PTHR47981	RAB FAMILY	coord: 1..206
None	No IPR available	PROSITE	PS51419	RAB	coord: 3..206 score: 32.737564
None	No IPR available	PROSITE	PS51420	RHO	coord: 2..180 score: 10.167402
None	No IPR available	CDD	cd01862	Rab7	coord: 9..182 e-value: 1.29257E-134 score: 372.382
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 11..179 e-value: 1.9E-13 score: 51.9
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 10..177 e-value: 1.6E-56 score: 190.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 3..206 score: 17.391026
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 2..189 e-value: 2.3E-69 score: 234.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 5..183
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 9..172 e-value: 1.0E-26 score: 91.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g05350.1	Cp4.1LG15g05350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005774	vacuolar membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding