Cp4.1LG15g04790 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g04790
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Cold regulated protein 27, putative isoform 2
Location	Cp4.1LG15: 5839491 .. 5842958 (+)
RNA-Seq Expression	Cp4.1LG15g04790
Synteny	Cp4.1LG15g04790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAGACCACCACCATTCACCGAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCATATCTGCACGAGCCTGAATCCCGAGAGGGTTTCGGACCTAAATTTTCGCCCACGATTTCCATTTTTTCTTTGATTTGATTTTCGATATTTGGCTGTTCCGAACGATTTCGCTTTGTCTTTGATCCTTCCGAAATGGTAGACGCTCATACGCCGTCGTCCATGTCGCCGCCGGTTGCAGATCGAGAATCACCCATGTCGGTCTCTGCTAGCGACTTGACTCGTTTGAACTCCGAATCCTACTCTTCTTCCAATACCGTTGATGCGTCCGAGGGGGATTTGCCTTTGATGCCTTCTCATCATTGTTTTCAACTGGATGCGGTAAATTGTGACTCTCTCTCTTTTGTTTTTGCTGTTTCTTGGAAGTATGATTTTGAGTTTTTCCTTGGTATGAACGAGTTTTTTGCGGACTGTGCTTTGTTTTTCTGCTTTGAACGTAGCGCCTGGAGTTCGTGTGACCTAGTTTTTGTGCTCTCGAAACTAATATCCTTGATTATGAGTGATTCTTTTTCTCTTGGTGGTGCCTTTAGAAATTTTTAATGGTAGAGTGGTTTTGGGTACCTCCCATTTGAATGTTTAGTGTTAGGGCATATTCAAGTTAAATCGTGGATGAATTTCGAGTTAAGTCTTTGTGATTCAATTTTGTTTGTTTGTTTTCAAAAGAAAACATTTTACTCTTTGAATTCCCCTTGTTTTAGTTGTTATTTTCTCTTGTAGGACACTCATTTTATTTGTATCAAATGTTTTAGCTCTAAATTTTAACTCATATTAGGGAACAATTTGAAAATTTCACGTGAAACATGAGGAATGGTTTTACTAATTGTTTTACTAATTGGAAATTTCAGGTGCAAACACATTGGACAGATGAGAAACACAGATTATTTCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCGATATAGGCATCTTCGTGCTTTTTCCTCGAAACAGAAAGTGCGTCGGAAGCTGATCATGCCTAATATATCTTCTTCAGAGGTGAGGCAATACATCCACAGCAAGAGTGGGAGTGAGTTCCCTATATCATTTCTCTACGTCCTTAATGATTTCCTCTTGTTTTATTTCTTTTCTTAGTCGCTGGTCCTTCAGGATGCCTCCTGGCAGAAGGCTAACATTGGGAGAACTGATCCTTTATTGCATAAGACTGCCGATTCTCCCGCTATTTTAGAGGATGTATGGATAAATCATTTCCCTTCTGCAGGAAAACCGTGTACTCTGGAAACTACTGATGTTCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGGCACATAAGAAACAAGACAAACTCCTGTCAATCTGCCAGAAGTTCTCAGCAGATTCCTTCATGCTGTCGTGATTCTCATACAATCTTTACAGGTACCCGAACACATTGTTCATGTTTTCCAAACCCTTTTCCAGAGTCTCACTTTTCATTGATTCTACCATCTAATATACTTGAAATTTGTAATCTATTCCCTTATTATGCATGTACACTATTGATGATCATCGGCCATATGCTTCATATTTTGTTGTTGTGATCTTCCAATCATATTTCGTAATGTTGAAGGTGTTTGCAATAATTATACTAGTAGTAGTATTGACTTAAGCACCATTTAGATGCACTATTTTTCTGATTTAAGTTTGTGTTGGTGTTACCAATATGACCATTACTTTGTGATGTTACCATTAGTTGCCACATTGCTTGCACCACTTGAAGTCCTGCAAACGTTTTTGCTTGAATTTTGTGTTTATCAAATGTGTTTCCTATGAGAGAGTTTCTGAAATACGACTTAGTGCATCCGAGTTGTAAAATTTGTACGTCAAGCTTAGGATATTGTGTTATCTTCCTAGCAATGGAAAATCTATATATTCTAGTACATTAATCGGATAGTTTCAACTTGGTTTTCAGTGTTTTGGTAACTTTGTTCCCTTAGCTTGATTTATAGTGTTTACACCTGGGTCACAAGATTTGACGTCACAGTTCTTCATTCTATGCTACAATTAAGAACTCACGGGCTAACTGATTGCGTATCTTATCAATTTGATGTTGTTTGATGTATATTTATAGTTGAAAAAGTAGAAGTCCTTTATGTAAAGTTGGATGAACATTGTTGTACGGAAAAATGAATAAAACCGAGTAGAAATGACTAGGATGGACAGCATTCTGAATATTGATGAACCTCTAAATGAAGCCAGGCTAATGGTAGACTAATTCTAGGACAGTAGCTGTTTAGGGATGAATCAAAGCAGAAATTCTTGAGGTCATAACACTTCGGTCAAATTAGAGCATCCATGTTAAGGAATTTACCTTCTTTTATGAATGTTTAATGCTTAATGTGATTTTTCTGTTTTCATACTAACGTAGTGTCTATTATCTCTTCATTGCAGAAGTTTCAGATCAAAACTTTGTGGATACTCATCCAGGAGAGTTGTCTGATGGCACGCCTATTACAAAACGATTAAAGAAAGCTTCCTCTGATTCTTCAGGCAACGACCGGGTAAAACTCGGGATTGCCTTTGATCTCTCTTTGGAGAACCAATAATTGCATTTTACAAATGATCCAAGACCGAATATGCTGCTATTTGATCTCTTAGGTTGCACCATATAAAAGATTATCATCAGAAAGATGAAAGCCAGATGCAAAAACTTTGTGCCTCCAAATTCAGATTTGTGTTACTGTGTAAGAGGGAGCTGACAACAACTCATTCCAACATGTGAAAACACCTGGCTGTTCAAGCTCGTTAACCGAACGCGACACGATTCTGTTTTCCTTTTGAAAGAGCATCGAAAAGTAAATAAGGGAAGTGACAACAATAATTCTACCAGAAGATCTACGGCTGGAAGGAGAAAATACGTTTGTTTATGGTACAAACTAAACTTTTTCTTAGTTCATCAAATATAGAGTGAAAATATATGTTAACCCTTTCATTTCTCCTGCTTTTTTTCTTCTTAGAGTTTGAAGAAATGGAAATTCCAATAGATTTAGGGTATGAATATACATGATATAGAGAAAGCTAGACACCGACCCTGATACTGATATAGATATACACACCCTTTTTCATCTGTTTTGAAATACTCTCATTTTGAAGTTCAGGTAGAGACCTCAAATGTAAATTACTATTACATAAAACAATAGATTTGAACAGACTTATTGATTCTCTTTAGGTGGAGCCTTTCTCTTGCTTATGGAGTATGTTGATGGCTAAGTGCTCGCTTGAGTAGTTGCTTTGTTCGAATGGTTATCAAACGGGACTTAAGCTATTATATCTTTGCTTGCTTCGTTACGATCTTATATAAGCTATAATATGCAGATTCAATCTTTTTTTTTTCTTTCAAAAAACCATTGTTGGTTTTTTCTTGGAAAATTTGTGATGATTGTTGCTATTTTGTCCCTAATATTCTAACA

mRNA sequence

CACAGACCACCACCATTCACCGAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCATATCTGCACGAGCCTGAATCCCGAGAGGGTTTCGGACCTAAATTTTCGCCCACGATTTCCATTTTTTCTTTGATTTGATTTTCGATATTTGGCTGTTCCGAACGATTTCGCTTTGTCTTTGATCCTTCCGAAATGGTAGACGCTCATACGCCGTCGTCCATGTCGCCGCCGGTTGCAGATCGAGAATCACCCATGTCGGTCTCTGCTAGCGACTTGACTCGTTTGAACTCCGAATCCTACTCTTCTTCCAATACCGTTGATGCGTCCGAGGGGGATTTGCCTTTGATGCCTTCTCATCATTGTTTTCAACTGGATGCGGTGCAAACACATTGGACAGATGAGAAACACAGATTATTTCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCGATATAGGCATCTTCGTGCTTTTTCCTCGAAACAGAAAGTGCGTCGGAAGCTGATCATGCCTAATATATCTTCTTCAGAGTCGCTGGTCCTTCAGGATGCCTCCTGGCAGAAGGCTAACATTGGGAGAACTGATCCTTTATTGCATAAGACTGCCGATTCTCCCGCTATTTTAGAGGATGTATGGATAAATCATTTCCCTTCTGCAGGAAAACCGTGTACTCTGGAAACTACTGATGTTCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGGCACATAAGAAACAAGACAAACTCCTGTCAATCTGCCAGAAGTTCTCAGCAGATTCCTTCATGCTGTCGTGATTCTCATACAATCTTTACAGAAGTTTCAGATCAAAACTTTGTGGATACTCATCCAGGAGAGTTGTCTGATGGCACGCCTATTACAAAACGATTAAAGAAAGCTTCCTCTGATTCTTCAGGCAACGACCGGGTTGCACCATATAAAAGATTATCATCAGAAAGATGAAAGCCAGATGCAAAAACTTTGTGCCTCCAAATTCAGATTTGTGTTACTGTGTAAGAGGGAGCTGACAACAACTCATTCCAACATGTGAAAACACCTGGCTGTTCAAGCTCGTTAACCGAACGCGACACGATTCTGTTTTCCTTTTGAAAGAGCATCGAAAAGTAAATAAGGGAAGTGACAACAATAATTCTACCAGAAGATCTACGGCTGGAAGGAGAAAATACGTTTGTTTATGGTACAAACTAAACTTTTTCTTAGTTCATCAAATATAGAGTGAAAATATATGTTAACCCTTTCATTTCTCCTGCTTTTTTTCTTCTTAGAGTTTGAAGAAATGGAAATTCCAATAGATTTAGGGTATGAATATACATGATATAGAGAAAGCTAGACACCGACCCTGATACTGATATAGATATACACACCCTTTTTCATCTGTTTTGAAATACTCTCATTTTGAAGTTCAGGTAGAGACCTCAAATGTAAATTACTATTACATAAAACAATAGATTTGAACAGACTTATTGATTCTCTTTAGGTGGAGCCTTTCTCTTGCTTATGGAGTATGTTGATGGCTAAGTGCTCGCTTGAGTAGTTGCTTTGTTCGAATGGTTATCAAACGGGACTTAAGCTATTATATCTTTGCTTGCTTCGTTACGATCTTATATAAGCTATAATATGCAGATTCAATCTTTTTTTTTTCTTTCAAAAAACCATTGTTGGTTTTTTCTTGGAAAATTTGTGATGATTGTTGCTATTTTGTCCCTAATATTCTAACA

Coding sequence (CDS)

ATGGTAGACGCTCATACGCCGTCGTCCATGTCGCCGCCGGTTGCAGATCGAGAATCACCCATGTCGGTCTCTGCTAGCGACTTGACTCGTTTGAACTCCGAATCCTACTCTTCTTCCAATACCGTTGATGCGTCCGAGGGGGATTTGCCTTTGATGCCTTCTCATCATTGTTTTCAACTGGATGCGGTGCAAACACATTGGACAGATGAGAAACACAGATTATTTCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCGATATAGGCATCTTCGTGCTTTTTCCTCGAAACAGAAAGTGCGTCGGAAGCTGATCATGCCTAATATATCTTCTTCAGAGTCGCTGGTCCTTCAGGATGCCTCCTGGCAGAAGGCTAACATTGGGAGAACTGATCCTTTATTGCATAAGACTGCCGATTCTCCCGCTATTTTAGAGGATGTATGGATAAATCATTTCCCTTCTGCAGGAAAACCGTGTACTCTGGAAACTACTGATGTTCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGGCACATAAGAAACAAGACAAACTCCTGTCAATCTGCCAGAAGTTCTCAGCAGATTCCTTCATGCTGTCGTGATTCTCATACAATCTTTACAGAAGTTTCAGATCAAAACTTTGTGGATACTCATCCAGGAGAGTTGTCTGATGGCACGCCTATTACAAAACGATTAAAGAAAGCTTCCTCTGATTCTTCAGGCAACGACCGGGTTGCACCATATAAAAGATTATCATCAGAAAGATGA

Protein sequence

MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSCCRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRVAPYKRLSSER

Homology

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BLAST of Cp4.1LG15g04790 vs. ExPASy Swiss-Prot
Match: Q8L8T7 (Cold-regulated protein 27 OS=Arabidopsis thaliana OX=3702 GN=COR27 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-10
Identity = 70/234 (29.91%), Postives = 102/234 (43.59%), Query Frame = 0


Query: 30  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHR 89
           R + +S  SS+   + EG+     S +    + ++T WT+EKH L+L S+EASFV  L  
Sbjct: 13  RFSDDSDDSSDDASSVEGE--TTSSMYSAGKEYMETEWTNEKHSLYLKSMEASFVDQL-- 72

Query: 90  YRHLRAFSSKQKVRRKLIMPN---ISSSESLVLQDASWQKANIGRTDPLLH--KTADSPA 149
           Y  L A    + V       +    S  +  VL D  WQK N+ + +  ++     +S  
Sbjct: 73  YNSLGALGKNENVSESTRFGSGRKPSQEQFKVLHDGFWQKINVKQPEHRINGRHGGNSHE 132

Query: 150 ILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQ--SARSSQQIPSCCR 209
            L   WI H+    K     T +   +  S S+      K   C   SA S +Q+ S  R
Sbjct: 133 FLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSN-----GKKGICSSGSASSLKQLSSHSR 192

Query: 210 DSHTIF---TEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRVAPYKRL 254
           D   I     EVSDQNFV  + G   +     K      S+SS  D+V P  +L
Sbjct: 193 DHDQISVGEAEVSDQNFV--NEGIKGENGSSKKMKTVMMSESSSTDQVVPLNKL 235

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BLAST of Cp4.1LG15g04790 vs. NCBI nr
Match: XP_023553839.1 (uncharacterized protein LOC111811294 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 513 bits (1321), Expect = 2.20e-183
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60
           MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL
Sbjct: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60

Query: 61  DAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNISSSESLVLQ 120
           DAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNISSSESLVLQ
Sbjct: 61  DAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNISSSESLVLQ 120

Query: 121 DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRH 180
           DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRH
Sbjct: 121 DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRH 180

Query: 181 IRNKTNSCQSARSSQQIPSCCRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSD 240
           IRNKTNSCQSARSSQQIPSCCRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSD
Sbjct: 181 IRNKTNSCQSARSSQQIPSCCRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSD 240

Query: 241 SSGNDRVAPYKRLSSER 257
           SSGNDRVAPYKRLSSER
Sbjct: 241 SSGNDRVAPYKRLSSER 257

[Close]

BLAST of Cp4.1LG15g04790 vs. NCBI nr
Match: XP_023553838.1 (uncharacterized protein LOC111811294 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 494 bits (1273), Expect = 5.11e-176
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60
           MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL
Sbjct: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60

Query: 61  DAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNISSSESLVLQ 120
           DAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNISSSESLVLQ
Sbjct: 61  DAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNISSSESLVLQ 120

Query: 121 DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRH 180
           DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRH
Sbjct: 121 DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRH 180

Query: 181 IRNKTNSCQSARSSQQIPSCCRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSD 240
           IRNKTNSCQSARSSQQIPSCCRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSD
Sbjct: 181 IRNKTNSCQSARSSQQIPSCCRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSD 240

Query: 241 SSGNDRV 247
           SSGNDRV
Sbjct: 241 SSGNDRV 247

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BLAST of Cp4.1LG15g04790 vs. NCBI nr
Match: XP_022952081.1 (uncharacterized protein LOC111454842 isoform X2 [Cucurbita moschata])

HSP 1 Score: 482 bits (1241), Expect = 3.45e-171
Identity = 243/257 (94.55%), Postives = 248/257 (96.50%), Query Frame = 0


Query: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60
           MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL
Sbjct: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60

Query: 61  DAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNISSSESLVLQ 120
           DAVQTHWT+EKHRLFLDSLEASFVQDLHRYRHLRA SSKQK+RRK IMPNISSSES+VLQ
Sbjct: 61  DAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSESMVLQ 120

Query: 121 DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRH 180
           DASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAG  CTLETTDVLEECGSCSDR H
Sbjct: 121 DASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSH 180

Query: 181 IRNKTNSCQSARSSQQIPSCCRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSD 240
           IRNKTNS QSARSSQQIP CCRDSHTI TEVSDQNFVDTHPGELSDGTPITKRLKKASSD
Sbjct: 181 IRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSD 240

Query: 241 SSGNDRVAPYKRLSSER 257
           SSGN+RVAPYKRLSSER
Sbjct: 241 SSGNNRVAPYKRLSSER 257

[Close]

BLAST of Cp4.1LG15g04790 vs. NCBI nr
Match: XP_022972373.1 (uncharacterized protein LOC111470946 isoform X2 [Cucurbita maxima])

HSP 1 Score: 478 bits (1230), Expect = 1.64e-169
Identity = 242/257 (94.16%), Postives = 245/257 (95.33%), Query Frame = 0


Query: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60
           MVDAHTPSSMSPPVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL
Sbjct: 1   MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60

Query: 61  DAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNISSSESLVLQ 120
           DAVQTHWTDEKHRLFLD+LEASFVQDLHRYRHLRAFSSKQK+RRK IMPNISSSES+VLQ
Sbjct: 61  DAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMRRKPIMPNISSSESMVLQ 120

Query: 121 DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRH 180
           DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAG   T ETTDVLEECGSCSDR H
Sbjct: 121 DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSH 180

Query: 181 IRNKTNSCQSARSSQQIPSCCRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSD 240
           IRNKTNSCQSARSSQQIP CCRDSHTI  EVSDQNFVDTHPGELS GTPITKRLKKASSD
Sbjct: 181 IRNKTNSCQSARSSQQIPPCCRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSD 240

Query: 241 SSGNDRVAPYKRLSSER 257
           S GNDRVAPYKRLSSER
Sbjct: 241 SLGNDRVAPYKRLSSER 257

[Close]

BLAST of Cp4.1LG15g04790 vs. NCBI nr
Match: XP_022952080.1 (uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata])

HSP 1 Score: 464 bits (1193), Expect = 7.98e-164
Identity = 233/247 (94.33%), Postives = 238/247 (96.36%), Query Frame = 0


Query: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60
           MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL
Sbjct: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60

Query: 61  DAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNISSSESLVLQ 120
           DAVQTHWT+EKHRLFLDSLEASFVQDLHRYRHLRA SSKQK+RRK IMPNISSSES+VLQ
Sbjct: 61  DAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSESMVLQ 120

Query: 121 DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRH 180
           DASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAG  CTLETTDVLEECGSCSDR H
Sbjct: 121 DASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSH 180

Query: 181 IRNKTNSCQSARSSQQIPSCCRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSD 240
           IRNKTNS QSARSSQQIP CCRDSHTI TEVSDQNFVDTHPGELSDGTPITKRLKKASSD
Sbjct: 181 IRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSD 240

Query: 241 SSGNDRV 247
           SSGN+RV
Sbjct: 241 SSGNNRV 247

[Close]

BLAST of Cp4.1LG15g04790 vs. ExPASy TrEMBL
Match: A0A6J1GJA3 (uncharacterized protein LOC111454842 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454842 PE=4 SV=1)

HSP 1 Score: 482 bits (1241), Expect = 1.67e-171
Identity = 243/257 (94.55%), Postives = 248/257 (96.50%), Query Frame = 0


Query: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60
           MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL
Sbjct: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60

Query: 61  DAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNISSSESLVLQ 120
           DAVQTHWT+EKHRLFLDSLEASFVQDLHRYRHLRA SSKQK+RRK IMPNISSSES+VLQ
Sbjct: 61  DAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSESMVLQ 120

Query: 121 DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRH 180
           DASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAG  CTLETTDVLEECGSCSDR H
Sbjct: 121 DASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSH 180

Query: 181 IRNKTNSCQSARSSQQIPSCCRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSD 240
           IRNKTNS QSARSSQQIP CCRDSHTI TEVSDQNFVDTHPGELSDGTPITKRLKKASSD
Sbjct: 181 IRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSD 240

Query: 241 SSGNDRVAPYKRLSSER 257
           SSGN+RVAPYKRLSSER
Sbjct: 241 SSGNNRVAPYKRLSSER 257

[Close]

BLAST of Cp4.1LG15g04790 vs. ExPASy TrEMBL
Match: A0A6J1I9R8 (uncharacterized protein LOC111470946 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470946 PE=4 SV=1)

HSP 1 Score: 478 bits (1230), Expect = 7.95e-170
Identity = 242/257 (94.16%), Postives = 245/257 (95.33%), Query Frame = 0


Query: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60
           MVDAHTPSSMSPPVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL
Sbjct: 1   MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60

Query: 61  DAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNISSSESLVLQ 120
           DAVQTHWTDEKHRLFLD+LEASFVQDLHRYRHLRAFSSKQK+RRK IMPNISSSES+VLQ
Sbjct: 61  DAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMRRKPIMPNISSSESMVLQ 120

Query: 121 DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRH 180
           DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAG   T ETTDVLEECGSCSDR H
Sbjct: 121 DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSH 180

Query: 181 IRNKTNSCQSARSSQQIPSCCRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSD 240
           IRNKTNSCQSARSSQQIP CCRDSHTI  EVSDQNFVDTHPGELS GTPITKRLKKASSD
Sbjct: 181 IRNKTNSCQSARSSQQIPPCCRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSD 240

Query: 241 SSGNDRVAPYKRLSSER 257
           S GNDRVAPYKRLSSER
Sbjct: 241 SLGNDRVAPYKRLSSER 257

[Close]

BLAST of Cp4.1LG15g04790 vs. ExPASy TrEMBL
Match: A0A6J1GKR5 (uncharacterized protein LOC111454842 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454842 PE=4 SV=1)

HSP 1 Score: 464 bits (1193), Expect = 3.86e-164
Identity = 233/247 (94.33%), Postives = 238/247 (96.36%), Query Frame = 0


Query: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60
           MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL
Sbjct: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60

Query: 61  DAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNISSSESLVLQ 120
           DAVQTHWT+EKHRLFLDSLEASFVQDLHRYRHLRA SSKQK+RRK IMPNISSSES+VLQ
Sbjct: 61  DAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSESMVLQ 120

Query: 121 DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRH 180
           DASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAG  CTLETTDVLEECGSCSDR H
Sbjct: 121 DASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSH 180

Query: 181 IRNKTNSCQSARSSQQIPSCCRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSD 240
           IRNKTNS QSARSSQQIP CCRDSHTI TEVSDQNFVDTHPGELSDGTPITKRLKKASSD
Sbjct: 181 IRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSD 240

Query: 241 SSGNDRV 247
           SSGN+RV
Sbjct: 241 SSGNNRV 247

[Close]

BLAST of Cp4.1LG15g04790 vs. ExPASy TrEMBL
Match: A0A6J1I4M4 (uncharacterized protein LOC111470946 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470946 PE=4 SV=1)

HSP 1 Score: 459 bits (1182), Expect = 1.83e-162
Identity = 232/247 (93.93%), Postives = 235/247 (95.14%), Query Frame = 0


Query: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60
           MVDAHTPSSMSPPVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL
Sbjct: 1   MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60

Query: 61  DAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNISSSESLVLQ 120
           DAVQTHWTDEKHRLFLD+LEASFVQDLHRYRHLRAFSSKQK+RRK IMPNISSSES+VLQ
Sbjct: 61  DAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMRRKPIMPNISSSESMVLQ 120

Query: 121 DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRH 180
           DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAG   T ETTDVLEECGSCSDR H
Sbjct: 121 DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSH 180

Query: 181 IRNKTNSCQSARSSQQIPSCCRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSD 240
           IRNKTNSCQSARSSQQIP CCRDSHTI  EVSDQNFVDTHPGELS GTPITKRLKKASSD
Sbjct: 181 IRNKTNSCQSARSSQQIPPCCRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSD 240

Query: 241 SSGNDRV 247
           S GNDRV
Sbjct: 241 SLGNDRV 247

[Close]

BLAST of Cp4.1LG15g04790 vs. ExPASy TrEMBL
Match: A0A6J1GJF7 (uncharacterized protein LOC111454842 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111454842 PE=4 SV=1)

HSP 1 Score: 363 bits (931), Expect = 9.98e-125
Identity = 195/247 (78.95%), Postives = 201/247 (81.38%), Query Frame = 0


Query: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60
           MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL
Sbjct: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60

Query: 61  DAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNISSSESLVLQ 120
           DAVQTHWT+EKHRLFLDSLEASFVQDLHRYRHLRA SSKQK+RRK IMPNISSSE     
Sbjct: 61  DAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSE----- 120

Query: 121 DASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRH 180
                                   + + +   H  S    CTLETTDVLEECGSCSDR H
Sbjct: 121 ------------------------VRQYI---HSKSGRNQCTLETTDVLEECGSCSDRSH 180

Query: 181 IRNKTNSCQSARSSQQIPSCCRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSD 240
           IRNKTNS QSARSSQQIP CCRDSHTI TEVSDQNFVDTHPGELSDGTPITKRLKKASSD
Sbjct: 181 IRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSD 215

Query: 241 SSGNDRV 247
           SSGN+RV
Sbjct: 241 SSGNNRV 215

[Close]

BLAST of Cp4.1LG15g04790 vs. TAIR 10
Match: AT5G42900.3 (cold regulated gene 27 )

HSP 1 Score: 68.9 bits (167), Expect = 6.6e-12
Identity = 70/233 (30.04%), Postives = 102/233 (43.78%), Query Frame = 0


Query: 30  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHR 89
           R + +S  SS+   + EG+     S +    + ++T WT+EKH L+L S+EASFV  L  
Sbjct: 13  RFSDDSDDSSDDASSVEGE--TTSSMYSAGKEYMETEWTNEKHSLYLKSMEASFVDQL-- 72

Query: 90  YRHLRAFSSKQKVRRKLIMPN---ISSSESLVLQDASWQKANIGRTDPLLH--KTADSPA 149
           Y  L A    + V       +    S  +  VL D  WQK N+ + +  ++     +S  
Sbjct: 73  YNSLGALGKNENVSESTRFGSGRKPSQEQFKVLHDGFWQKINVKQPEHRINGRHGGNSHE 132

Query: 150 ILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQ--SARSSQQIPSCCR 209
            L   WI H+    K     T +   +  S S+      K   C   SA S +Q+ S  R
Sbjct: 133 FLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSN-----GKKGICSSGSASSLKQLSSHSR 192

Query: 210 DSHTIFT--EVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRVAPYKRL 254
           D   I    EVSDQNFV  + G   +     K      S+SS  D+V P  +L
Sbjct: 193 DHDQISVGEEVSDQNFV--NEGIKGENGSSKKMKTVMMSESSSTDQVVPLNKL 234

[Close]

BLAST of Cp4.1LG15g04790 vs. TAIR 10
Match: AT5G42900.1 (cold regulated gene 27 )

HSP 1 Score: 68.6 bits (166), Expect = 8.6e-12
Identity = 70/234 (29.91%), Postives = 102/234 (43.59%), Query Frame = 0


Query: 30  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHR 89
           R + +S  SS+   + EG+     S +    + ++T WT+EKH L+L S+EASFV  L  
Sbjct: 13  RFSDDSDDSSDDASSVEGE--TTSSMYSAGKEYMETEWTNEKHSLYLKSMEASFVDQL-- 72

Query: 90  YRHLRAFSSKQKVRRKLIMPN---ISSSESLVLQDASWQKANIGRTDPLLH--KTADSPA 149
           Y  L A    + V       +    S  +  VL D  WQK N+ + +  ++     +S  
Sbjct: 73  YNSLGALGKNENVSESTRFGSGRKPSQEQFKVLHDGFWQKINVKQPEHRINGRHGGNSHE 132

Query: 150 ILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQ--SARSSQQIPSCCR 209
            L   WI H+    K     T +   +  S S+      K   C   SA S +Q+ S  R
Sbjct: 133 FLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSN-----GKKGICSSGSASSLKQLSSHSR 192

Query: 210 DSHTIF---TEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRVAPYKRL 254
           D   I     EVSDQNFV  + G   +     K      S+SS  D+V P  +L
Sbjct: 193 DHDQISVGEAEVSDQNFV--NEGIKGENGSSKKMKTVMMSESSSTDQVVPLNKL 235

[Close]

BLAST of Cp4.1LG15g04790 vs. TAIR 10
Match: AT5G42900.2 (cold regulated gene 27 )

HSP 1 Score: 68.6 bits (166), Expect = 8.6e-12
Identity = 70/234 (29.91%), Postives = 102/234 (43.59%), Query Frame = 0


Query: 30  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHR 89
           R + +S  SS+   + EG+     S +    + ++T WT+EKH L+L S+EASFV  L  
Sbjct: 13  RFSDDSDDSSDDASSVEGE--TTSSMYSAGKEYMETEWTNEKHSLYLKSMEASFVDQL-- 72

Query: 90  YRHLRAFSSKQKVRRKLIMPN---ISSSESLVLQDASWQKANIGRTDPLLH--KTADSPA 149
           Y  L A    + V       +    S  +  VL D  WQK N+ + +  ++     +S  
Sbjct: 73  YNSLGALGKNENVSESTRFGSGRKPSQEQFKVLHDGFWQKINVKQPEHRINGRHGGNSHE 132

Query: 150 ILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQ--SARSSQQIPSCCR 209
            L   WI H+    K     T +   +  S S+      K   C   SA S +Q+ S  R
Sbjct: 133 FLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSN-----GKKGICSSGSASSLKQLSSHSR 192

Query: 210 DSHTIF---TEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRVAPYKRL 254
           D   I     EVSDQNFV  + G   +     K      S+SS  D+V P  +L
Sbjct: 193 DHDQISVGEAEVSDQNFV--NEGIKGENGSSKKMKTVMMSESSSTDQVVPLNKL 235

[Close]

BLAST of Cp4.1LG15g04790 vs. TAIR 10
Match: AT4G33980.1 (BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 7.8e-05
Identity = 38/128 (29.69%), Postives = 60/128 (46.88%), Query Frame = 0


Query: 16  DRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLF 75
           DR+   + + S      S S  S  T + S  D          +LD   T WT+EKH  +
Sbjct: 15  DRDVSEASAESQSESTLSNSLDSGVTAETSRSDAD-------SKLDEC-TAWTNEKHNSY 74

Query: 76  LDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNI--SSSESLVLQDASWQKANIGRTD 135
           LD LE+SFV+ L+    L    +++  R + +  N   S+ +  VLQ+  WQK N G+  
Sbjct: 75  LDYLESSFVRQLY---SLLGGGTQRLSRTRDVQSNSHKSADQFTVLQNGCWQKVNFGKKQ 131

Query: 136 PLLHKTAD 142
             L  +++
Sbjct: 135 SCLETSSE 131

[Close]

BLAST of Cp4.1LG15g04790 vs. TAIR 10
Match: AT4G33980.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.3). )

HSP 1 Score: 45.4 bits (106), Expect = 7.8e-05
Identity = 38/128 (29.69%), Postives = 60/128 (46.88%), Query Frame = 0


Query: 16  DRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLF 75
           DR+   + + S      S S  S  T + S  D          +LD   T WT+EKH  +
Sbjct: 15  DRDVSEASAESQSESTLSNSLDSGVTAETSRSDAD-------SKLDEC-TAWTNEKHNSY 74

Query: 76  LDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNI--SSSESLVLQDASWQKANIGRTD 135
           LD LE+SFV+ L+    L    +++  R + +  N   S+ +  VLQ+  WQK N G+  
Sbjct: 75  LDYLESSFVRQLY---SLLGGGTQRLSRTRDVQSNSHKSADQFTVLQNGCWQKVNFGKKQ 131

Query: 136 PLLHKTAD 142
             L  +++
Sbjct: 135 SCLETSSE 131

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g04790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8T7	1.2e-10	29.91	Cold-regulated protein 27 OS=Arabidopsis thaliana OX=3702 GN=COR27 PE=1 SV=1	[more]

BLAST of Cp4.1LG15g04790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553839.1	2.20e-183	100.00	uncharacterized protein LOC111811294 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023553838.1	5.11e-176	100.00	uncharacterized protein LOC111811294 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022952081.1	3.45e-171	94.55	uncharacterized protein LOC111454842 isoform X2 [Cucurbita moschata]	[more]
XP_022972373.1	1.64e-169	94.16	uncharacterized protein LOC111470946 isoform X2 [Cucurbita maxima]	[more]
XP_022952080.1	7.98e-164	94.33	uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG15g04790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJA3	1.67e-171	94.55	uncharacterized protein LOC111454842 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I9R8	7.95e-170	94.16	uncharacterized protein LOC111470946 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GKR5	3.86e-164	94.33	uncharacterized protein LOC111454842 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I4M4	1.83e-162	93.93	uncharacterized protein LOC111470946 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GJF7	9.98e-125	78.95	uncharacterized protein LOC111454842 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Cp4.1LG15g04790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42900.3	6.6e-12	30.04	cold regulated gene 27	[more]
AT5G42900.1	8.6e-12	29.91	cold regulated gene 27	[more]
AT5G42900.2	8.6e-12	29.91	cold regulated gene 27	[more]
AT4G33980.1	7.8e-05	29.69	BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G429...	[more]
AT4G33980.2	7.8e-05	29.69	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOC...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..45
None	No IPR available	PANTHER	PTHR33676:SF17	REGULATED GENE 27, PUTATIVE ISOFORM 2-RELATED	coord: 21..254
IPR044678	Cold-regulated protein 27/28	PANTHER	PTHR33676	COLD REGULATED PROTEIN 27	coord: 21..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g04790.1	Cp4.1LG15g04790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0009409	response to cold