Cp4.1LG15g04630 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATAACCTAAAAATAAATCTATTAGAATTGTGAACCATATTAGTTCTAACGTTTTTTATAAGTCAAATAGTATATGTCTCTGCCCGCTTCCTTTTAAGAGCTCACAAAAGGCCAAGACGCACGCTAACAGCCAATCACCACGACGGAAGCATAAAAATCCACCACCGCTACAGCCATCAATCATTCAGATCATGGCTGCGACGACCGATTTAGATCCGATCCAGACAAATGCGACTCCCAATCCACCACCAAACAAGCAGATCTTCATCCTCTCTGGCCAGAGCAACATGGCCGGGCGAGGCGGCGTCTTAAAGAAGCTCCACCGGTGGGACGGCGTGGTTCCACCAGAAGCGCAGCCGCATCCGTCGATATTCCGTCTGAGCGCGAAGTTACATTGGGAGGTAGCGCATGAGCCACTGCACGCCGACATCGACACGAAGAAGACGTGCGGAGTGGGGCCAGGAATGGCGTTCGCGAACGGCGTGAGAGAGCGAGTAGGGACGGTAGCGCTGGTGCCGTGCGCTGTTGGAGGCACCGCCATCAAAGAGTGGGCGCGTGGAGAGAAGCTGTATGAGGATATGGTGAAGAGGGCGAGACATAGCGTGAAGGACGGCGGGGAAATTAGGGCAATTCTGTGGTTTCAAGGAGAGAGTGACACCTCTACTGAACATGATGCTGATGCGTACCAGGGGAATATGGAGGCGTTTGTTGCTAATGTGCGCCGGGATTTGGCCTTGCCTTCTCTCCCAATTATTCAGGTGATATTTTTATTACATTTATTTTATTTTTCTGACTATTGATTAATATGTTCATATTGGAATTTAGAAACCTTATTAGAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAACTCCCACTTCTACTTTAGGAAAAAAATTTAAAATTAAAGGAAGTAACAAAAATAAGATATAAAAAAGTTTCCGATCAAAACGGAGAAAAATCACAAAATCACACCTCATTGAAAAAACTATATAACTAATATAACGTGTTTACTAGGGAGAGGTTTCCATAACCTTCTAAAGAATGCTGAATGCTTCTTCTCTTCCTCCATGGACGTGGGATCTCATAAATAAAATATTTTTAATTATGATTTGAAACTAAAGTCACGGGTTCTTACTTGAAGCTCATCACTTTCTTGTATCTTTTAAATGTACGAATACCACTCTTCTAATATTTATCCAAAAGCGGAAAGGTACAAGAACGTGACGAGCTCCAAATACTATAATAGGAGCATATAACTTGAGTTTTGTGATGTTTCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCATTGAGACGAGCCCGAAAGAGAAATCCCAAAGAGGACAATATCTGCTAGCGATGTATCTGGGTCGTTACAAGTTTCAACTCATCCCAATTAGTAATATTTGTAGTCTAGTGCACTAATTCTAGTTACATGAGTGGTATAAAGATTTGAGAGTTTTTTGGGTAATTAGAGTCGAGAGAGAATTCCGTGACTGGAAAGGAGTTCCTTTACGTAAATTCTCATTTTCTTATTTTTTGTTGTCTTCTTTTCATTTATCAGTTATTTTTCTACTTATTCGTACGTTAAGAGTGAGATGTTTTTTCTCCTATATCAGAGCTTTAAGTTTGTAGTTTCTTTGAATGGTTGCATTATTGTCTGCACTTCCACATTAGAAAATTTTCTTGAAACGAACTGTGGTTCTATGGTTCGGTGAGTAATACGGGTCTCTTTCACTCTATGAGTCCATTAAAGCTTGACATAAAAAAAAAATTGATAGAGGATTAACTTTGCCTCTGGTAAGTGAAAGTCAAGGACGTGTTGATTCTAAGTTACACAAGGTCTTAAATTATAGATCGAACCGTGGTGCTTTTGAAAACTTGCTTGGTGATTGTGGTCGAGTGGAGTCGAGCGGTAGTTCGAACAAATGTTGTAAGAAGTTTGACATAAGTGATGAAGATTGGGAGGACATGGATTTGAAAATTTTTGACTAAAAATATTGTTGCTGAAAGCAGGTAGCACTGGCATCAGGAGTCAAGTATATTGAAAAAGTGAGGGAGGCTCAATTGGGAATGAGAGTGGAGAATGTGGTGTGTGTGGATGCAAAGGGATTGGAACTTCAAGAAGACAACCTCCATCTCACCACACAGGCTCAGGTCATTCTTGGTCAAATGCTGGCCGATGCCTACCTCACCCACTTTGCTCCACCACTCAAATCGAAGCCCTCGACCTAAATACCTCGTCTCGGTTCACAACTATAAACTAATAAATGGTTATTGAACGACACCTTATAAATCTTATCTGATTGTCTGATGCTTTGTTTTGTTGTTTGGGGAATTGGAACTTGAAGAACACGACCTCTACCTCACATAACACGTGATCGAGTCATTCTTGGTCAAATGCTGACCGATGCCTATCTCACCCACTTTGCTGCACCACTTGGCCTCCGTTCATAACTAAAAACTAAATGATTATCGAACGACGTCTTATAAATCTGGTTCGGTTTCTTTGCTGGAATTATCATTTAAATAAGGCTTATTTGTGCTTTTGTAAGTCGTATATGTATTGTATGTGTAATCCTGTTTGATTATTGTGAGTGTTTACATTTAGAGGGGTTCTCATGGGTTGGTGGTATCTTTGGCGGTTGTGGTAATGAAGTGAATGATAATAGAATGTGACCCACGAATTAGTGTAAACTTAACC AATAACCTAAAAATAAATCTATTAGAATTGTGAACCATATTAGTTCTAACGTTTTTTATAAGTCAAATAGTATATGTCTCTGCCCGCTTCCTTTTAAGAGCTCACAAAAGGCCAAGACGCACGCTAACAGCCAATCACCACGACGGAAGCATAAAAATCCACCACCGCTACAGCCATCAATCATTCAGATCATGGCTGCGACGACCGATTTAGATCCGATCCAGACAAATGCGACTCCCAATCCACCACCAAACAAGCAGATCTTCATCCTCTCTGGCCAGAGCAACATGGCCGGGCGAGGCGGCGTCTTAAAGAAGCTCCACCGGTGGGACGGCGTGGTTCCACCAGAAGCGCAGCCGCATCCGTCGATATTCCGTCTGAGCGCGAAGTTACATTGGGAGGTAGCGCATGAGCCACTGCACGCCGACATCGACACGAAGAAGACGTGCGGAGTGGGGCCAGGAATGGCGTTCGCGAACGGCGTGAGAGAGCGAGTAGGGACGGTAGCGCTGGTGCCGTGCGCTGTTGGAGGCACCGCCATCAAAGAGTGGGCGCGTGGAGAGAAGCTGTATGAGGATATGGTGAAGAGGGCGAGACATAGCGTGAAGGACGGCGGGGAAATTAGGGCAATTCTGTGGTTTCAAGGAGAGAGTGACACCTCTACTGAACATGATGCTGATGCGTACCAGGGGAATATGGAGGCGTTTGTTGCTAATGTGCGCCGGGATTTGGCCTTGCCTTCTCTCCCAATTATTCAGGTAGCACTGGCATCAGGAGTCAAGTATATTGAAAAAGTGAGGGAGGCTCAATTGGGAATGAGAGTGGAGAATGTGGTGTGTGTGGATGCAAAGGGATTGGAACTTCAAGAAGACAACCTCCATCTCACCACACAGGCTCAGGTCATTCTTGGTCAAATGCTGGCCGATGCCTACCTCACCCACTTTGCTCCACCACTCAAATCGAAGCCCTCGACCTAAATACCTCGTCTCGGTTCACAACTATAAACTAATAAATGGTTATTGAACGACACCTTATAAATCTTATCTGATTGTCTGATGCTTTGTTTTGTTGTTTGGGGAATTGGAACTTGAAGAACACGACCTCTACCTCACATAACACGTGATCGAGTCATTCTTGGTCAAATGCTGACCGATGCCTATCTCACCCACTTTGCTGCACCACTTGGCCTCCGTTCATAACTAAAAACTAAATGATTATCGAACGACGTCTTATAAATCTGGTTCGGTTTCTTTGCTGGAATTATCATTTAAATAAGGCTTATTTGTGCTTTTGTAAGTCGTATATGTATTGTATGTGTAATCCTGTTTGATTATTGTGAGTGTTTACATTTAGAGGGGTTCTCATGGGTTGGTGGTATCTTTGGCGGTTGTGGTAATGAAGTGAATGATAATAGAATGTGACCCACGAATTAGTGTAAACTTAACC ATGGCTGCGACGACCGATTTAGATCCGATCCAGACAAATGCGACTCCCAATCCACCACCAAACAAGCAGATCTTCATCCTCTCTGGCCAGAGCAACATGGCCGGGCGAGGCGGCGTCTTAAAGAAGCTCCACCGGTGGGACGGCGTGGTTCCACCAGAAGCGCAGCCGCATCCGTCGATATTCCGTCTGAGCGCGAAGTTACATTGGGAGGTAGCGCATGAGCCACTGCACGCCGACATCGACACGAAGAAGACGTGCGGAGTGGGGCCAGGAATGGCGTTCGCGAACGGCGTGAGAGAGCGAGTAGGGACGGTAGCGCTGGTGCCGTGCGCTGTTGGAGGCACCGCCATCAAAGAGTGGGCGCGTGGAGAGAAGCTGTATGAGGATATGGTGAAGAGGGCGAGACATAGCGTGAAGGACGGCGGGGAAATTAGGGCAATTCTGTGGTTTCAAGGAGAGAGTGACACCTCTACTGAACATGATGCTGATGCGTACCAGGGGAATATGGAGGCGTTTGTTGCTAATGTGCGCCGGGATTTGGCCTTGCCTTCTCTCCCAATTATTCAGGTAGCACTGGCATCAGGAGTCAAGTATATTGAAAAAGTGAGGGAGGCTCAATTGGGAATGAGAGTGGAGAATGTGGTGTGTGTGGATGCAAAGGGATTGGAACTTCAAGAAGACAACCTCCATCTCACCACACAGGCTCAGGTCATTCTTGGTCAAATGCTGGCCGATGCCTACCTCACCCACTTTGCTCCACCACTCAAATCGAAGCCCTCGACCTAA MAATTDLDPIQTNATPNPPPNKQIFILSGQSNMAGRGGVLKKLHRWDGVVPPEAQPHPSIFRLSAKLHWEVAHEPLHADIDTKKTCGVGPGMAFANGVRERVGTVALVPCAVGGTAIKEWARGEKLYEDMVKRARHSVKDGGEIRAILWFQGESDTSTEHDADAYQGNMEAFVANVRRDLALPSLPIIQVALASGVKYIEKVREAQLGMRVENVVCVDAKGLELQEDNLHLTTQAQVILGQMLADAYLTHFAPPLKSKPST Homology
BLAST of Cp4.1LG15g04630 vs. ExPASy Swiss-Prot
Match: Q8L9J9 (Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana OX=3702 GN=At4g34215 PE=1 SV=2) HSP 1 Score: 316.2 bits (809), Expect = 3.4e-85 Identity = 159/243 (65.43%), Postives = 183/243 (75.31%), Query Frame = 0
BLAST of Cp4.1LG15g04630 vs. NCBI nr
Match: XP_023553837.1 (probable carbohydrate esterase At4g34215 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 530 bits (1364), Expect = 8.33e-190 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
BLAST of Cp4.1LG15g04630 vs. NCBI nr
Match: XP_022952956.1 (probable carbohydrate esterase At4g34215 [Cucurbita moschata]) HSP 1 Score: 522 bits (1345), Expect = 6.57e-187 Identity = 257/261 (98.47%), Postives = 259/261 (99.23%), Query Frame = 0
BLAST of Cp4.1LG15g04630 vs. NCBI nr
Match: KAG7011640.1 (putative carbohydrate esterase [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 520 bits (1340), Expect = 3.80e-186 Identity = 256/261 (98.08%), Postives = 258/261 (98.85%), Query Frame = 0
BLAST of Cp4.1LG15g04630 vs. NCBI nr
Match: XP_022972397.1 (probable carbohydrate esterase At4g34215 [Cucurbita maxima]) HSP 1 Score: 519 bits (1337), Expect = 1.09e-185 Identity = 255/261 (97.70%), Postives = 259/261 (99.23%), Query Frame = 0
BLAST of Cp4.1LG15g04630 vs. NCBI nr
Match: XP_038888271.1 (probable carbohydrate esterase At4g34215 [Benincasa hispida]) HSP 1 Score: 467 bits (1201), Expect = 6.78e-165 Identity = 232/259 (89.58%), Postives = 240/259 (92.66%), Query Frame = 0
BLAST of Cp4.1LG15g04630 vs. ExPASy TrEMBL
Match: A0A6J1GLP0 (probable carbohydrate esterase At4g34215 OS=Cucurbita moschata OX=3662 GN=LOC111455478 PE=4 SV=1) HSP 1 Score: 522 bits (1345), Expect = 3.18e-187 Identity = 257/261 (98.47%), Postives = 259/261 (99.23%), Query Frame = 0
BLAST of Cp4.1LG15g04630 vs. ExPASy TrEMBL
Match: A0A6J1I4P5 (probable carbohydrate esterase At4g34215 OS=Cucurbita maxima OX=3661 GN=LOC111470965 PE=4 SV=1) HSP 1 Score: 519 bits (1337), Expect = 5.28e-186 Identity = 255/261 (97.70%), Postives = 259/261 (99.23%), Query Frame = 0
BLAST of Cp4.1LG15g04630 vs. ExPASy TrEMBL
Match: A0A0A0K303 (SASA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071670 PE=4 SV=1) HSP 1 Score: 454 bits (1169), Expect = 2.06e-160 Identity = 224/258 (86.82%), Postives = 236/258 (91.47%), Query Frame = 0
BLAST of Cp4.1LG15g04630 vs. ExPASy TrEMBL
Match: A0A1S3BZF3 (probable carbohydrate esterase At4g34215 OS=Cucumis melo OX=3656 GN=LOC103495282 PE=4 SV=1) HSP 1 Score: 450 bits (1158), Expect = 6.80e-159 Identity = 221/254 (87.01%), Postives = 234/254 (92.13%), Query Frame = 0
BLAST of Cp4.1LG15g04630 vs. ExPASy TrEMBL
Match: A0A6J1D4Q9 (probable carbohydrate esterase At4g34215 OS=Momordica charantia OX=3673 GN=LOC111017295 PE=4 SV=1) HSP 1 Score: 415 bits (1067), Expect = 4.47e-145 Identity = 208/249 (83.53%), Postives = 222/249 (89.16%), Query Frame = 0
BLAST of Cp4.1LG15g04630 vs. TAIR 10
Match: AT4G34215.1 (Domain of unknown function (DUF303) ) HSP 1 Score: 316.2 bits (809), Expect = 2.4e-86 Identity = 159/243 (65.43%), Postives = 183/243 (75.31%), Query Frame = 0
BLAST of Cp4.1LG15g04630 vs. TAIR 10
Match: AT4G34215.2 (Domain of unknown function (DUF303) ) HSP 1 Score: 316.2 bits (809), Expect = 2.4e-86 Identity = 159/243 (65.43%), Postives = 183/243 (75.31%), Query Frame = 0
BLAST of Cp4.1LG15g04630 vs. TAIR 10
Match: AT3G53010.1 (Domain of unknown function (DUF303) ) HSP 1 Score: 258.1 bits (658), Expect = 7.8e-69 Identity = 134/247 (54.25%), Postives = 172/247 (69.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|