Cp4.1LG15g04620 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g04620
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	stress enhanced protein 1, chloroplastic-like
Location	Cp4.1LG15: 5715363 .. 5720353 (+)
RNA-Seq Expression	Cp4.1LG15g04620
Synteny	Cp4.1LG15g04620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCGTCAACCGCTGGTATCCGTGTAATTGGTCATTGAAGAAGAAGGGATAAGGAATTTCAGGAAAGAGCTCAGGATTTCTCCGGCGTCAATCGAGATCTTAAAATGGCGGCTCTTCATGCTTCGGCCTCCCTCTCTCTCGCCGTACGCGGTACTCTGTATCTCTCTCACAGCTTCTCCGTCTATCTCTTTGGTTATGTGATTGTTGAATATCCAAACCATTGATAAACCAAAACAATGTTTCAGATGCTTCCTTCGCAAGAAGAAGAGCACCACAAGTCTTTCCTCTCCACAGAGGCTCCCTTCCGAATTTATATCGACTTGGAACGACGTTTGCTACTGGCTCTCCACTCGGTACTGATTCTTATTATTTCTATTATTCGTCTAGTTCGAATGTTTCTGCTTGATTTATTGATGATTTATATCATTTGACGAGTTCTTCAGTTCAATTTTATGTTGGAGTTGCAATTTCAAGTATACAGTGGTGTATATTACGAATTCTGGTAATGAACATTGAACTGCCCTAACATCTAAATAAAATCTGGATACGGTGTTGAGAAAGAAATATTGCAGAAGTTCCAGTCTAAGTGATCTAATGCAACTTTCATTCTGACTTAGAGAGTTTTATGGTTACTGTTAGATTAATTGGAATATTAGGAAATTGGAGCTGGAGCCATTTGAAAAATAGTATGGTAATTGCAATTTTTTAATTCTTCGTAGATTTTGGCAAAGGAAGCAATAGATTCCACTTGATTTTATGAGTATCAGCTAATGTTTACTCTTGTTCCCAGTGTTAAGCAAGCCAACTGGTCAAAAGAAGCATAAAGTGAAACCAAATTCTGTTTCTATACGATGTGAGCAAAGTAGCCAAGAGAGTAACATTCTGGATGTTTGGCTTGGGCGGCTTGCGATGGTTGGATTTGCAATTGCAATTAGTGTTGAAATAGCAACAGGCAAGGGACTTTTAGAGGTATGGCCTTTCTAATTACATCAAATGGGTCATCGTTACTTATATTTCTGATAGCTGATAGACCATCTTTAGCTTTTGGAAGCTTGAATTTTGCCAAGTTTTTTCTAAAGATCTTACTGTTTATGACTAATAAGATACTAGCTCCACAGCACATTGATATCAGGCCACATTTTCTGTTCAAAAAATTATATTCTCCATAATTATTTATACAAAAGTATCCTTTGTACCACTTTGAGTATTCCGTTTGAAGTGTTGGGTTGCTCTAATGATGGCCCCTGAAACGTGTCTAGATTGTATTCCTATGGCTTTTTTTCGTCACTCTGCCATTTTTATTCTCACACACTTGTCTCGCTGATTTTGGCTTGATATAAAAGTGACCATTGAATTATTCTAGGCTGGTCATTGGATGTGCGGCATCTGCCTGATTGATTTTGGCCTGATATAAAAGCGACTGTTTAGTTAATCTAGGCTGGTCGTTGTATGTGCCTAATTCTTTATCACTGTGTTTGATCTTCCCATTTGTTTATTTTGTCCAGTTAGTGGAATTCCCAGTGTCATTGCCAGACAAGTTTCATAGGAGATACCACATTAAATTAACTGAAACCTTACCAGAATCACTGTTTTCATGATGCAGAATTTTGGAGTAACGACTCCTCTGCCAAGTGTGGCCTTGGCAGTTACCGCATTGGTTGGCATACTGACAGCAGTTTTCATCTTCCAATCAGCTACCAAAAACTGAACATATCTAGATTATCTTCACACTTTATCTGTATAGTTTGTAATCCTAAAAGATTATTTCATTGATATTCATCTTCAATCGTTGTAATATGCTCGAATGCGAACAACGGGCAACCAATAGAAACTTCTTTCACGAAAATGTCTCCTACCAACATCAATGAGTCAATGACTGTTTTCAGGTTTCCTGTAATGAAAAGGCCATCATTCTTGTGCATAATATTATGAGTCAATGGCTACTTGGAGGAGACCCTTTGTTGCCCAAGATCAATATATCACGTGTCTTTGTTTAAAGAGCTGGGCCACAGTTTGTGTTTCAGTAGAAGATAAGTGCTTTATATTGCTTTCTAAAGTAGTTCAATATATTCCTTTCAGATATGAAGAAGCTTCTCCATCAGTCTAAGTAAGTTCATTCACTCTGGCAAACAAATATACTTGAAGGAGAGACAAAGAGCTTTATTGCCTTCTGTCCCAAAGAATCAATTCTCTTTCAGCCTTTACATGTAGAAGTTTTTGGTCTAATATTCACTTGGAAGACAAGGTATCTCTCATGCCATCTCCCTGTAAACTGATGCTTTGGCTTTGTCTTTTTCAGTTGGCCTTACTTTCTCCCACAGAACTAAGATCTGGTGCACTTGCACTGAAAATTTTGCCATCTTCTTTATATTCCTTGTATACTGCAGCATGGGTGCAGTGATAACCAGGTTGAGGAAGCGACTCTTCCAGAACCGTGAAGTGAGAATCCTGATGGTCGGTCTTGATGCATCGGGGAAGACAACCATTTTGTACAAACTAAAACTTGGTGAAGTTGTTATGACCGTACCAACTATTGGTATGCTCTCTGATCATTTATTTATTTATATATTCTGGATAGGATTTTACTCTGAAAACCCATCTTTATTTCCCCACATTTTTTGACAAATAAATTGTTTTGAGATAAAATGGATATTAGCCCGTGTTATTATTTAGTTTTTTCTTAAAATTATTTTCAAGAATAGTTTTATTAGAAAATTTTGATCCTGCTTTTTCTCTTTTGAAATTTGGTTCGATAATGTGCATGTCTTGGACAAAATGTAGAATATATACTTTTGTTTTTATTCTTTAGCTACATATTACAACTTTATGGAGTATTTTCCTCATTTTACCCTTTATATATATTAATAATTACTTAATCTTGATAATAATAATTTTCAATTATTTTATTTGTGCAAAATAGTTTGTTTACTAGCAATTTGTAATATTACTATTTCTACTAATTGTTTTCTTGAGAATTTTTGTTTTTTTTTTTAAAAAAAATTTCAAGTATTCTACTACTATCAACCTGGAGTGTGTGAAATTGAAAAGAAGACTTGTGCATAATAATTGTGGGACAGTTTTTTTTATAGTTGCATTTTATGATCCAGGGTTCAATGTGGAAACATTAGAATACAAAAACATTAGCTGCTCTGTCTGGGACGTTGGAGGACAAGATAAGGTTTGAAATCACACCCTCTCACTCTGCTTCTGCTAATACTTCACTTCGATTGCGATCTGAAAAACTAAAGAACATCTGCTTCAAAATTTATGTTAATGAAACTGTAACAATAATGGTCAAAACATATGCTCGTGAAAGTTCTAAAACTAGAACATAACATTTCAAATAACCCTGCAAAAATATTTCTTTGATGTTTGTTGTACAAGTGGTTTGAAATTAACAAAATAAATACGGTGAGGATAACTTATCTAGATATATTTCCAATTAGTTTTAGTTGTAAAAATAACTTTGAATCTCATCTTGGGGCCGAAGGCTTTGCTTATTGCAGTGAGAGAAGAGCCATTTGAGTTGAATTATATCAACCTATGGTTAAAGTTCAAATAAATAAAAATTTTATAGGCCGGATGGATTCATGGTTCTTCAAAATTTGAACTTCATCTATTATATATGTATAATTATTTTTTCGATTCCTAAATTTTTTTAAGTTTTCAAATATTGGATTGAGTTGAGTTCGTTATTTAATAAATATTGCAGAAGTTCAAAAAGTTGTCTTTATCCAACTGCTCCATGTTAATTTGAGTCTTTATCCAACACAACCATGCTCCATGTTAGTTTGATTATTTACTTGGTTATGGTGATAAAACTGGGAAACAAAACATTTAATTTGTTTTGAACCAAACAGATAAGGCCATTATGGAGACATTACTTCCAGAACACACAAGGACTTGTATATGTTGTGGACAGCGGTGACAGAGGGAGAATCTGCGAAGCCAGGAATGAGTTGCATCGCATTCTCAGTGAGGTATAGCACTCAACCTTCACTATGTTTAGGTATATTCTTATGCTTTTTGAGATGATTTTAAGATGCGAAAAGAAAAAGAAAATGACAGCCAGAGCTAAGGAATGTAGCTGTGCTTGTGTTTGCTAACAAGCAAGATCTTCCACAATCAATGTCTGTGTCTGAAATTGCAACTAAACTTGGCCTCCACAGCCTCTCTCAAAGAAGATGGTACGCAACTTATTTTTGTTCTGTTGAAAAATATCTGGGATGAATATGAACTTTTGAATCTGTTCTGAAATCATGGTTTACAACAATTTTCTTTTTGTTAAAAGAATATATAAGTTTTTTCGTTTTTGAATTTTTCAAAATGTTTTAATTTGGTTATATCTTTTGTTGCCATTTGAATTTTGTGTCTAATTTATTTTGAGATTATATTTTACGAAAGTCAATTTTAGAAAAAAAAATTCAGCTTTAGCTTAATTTTGTACGTGCTTTCCTCCATTTTTATCTTGTATTTTTAGCATGATAGTATTTTAGGATTAGATAAATAAATCCTAGTTTTTTCGATTGGTCGTATACATCGTTTATACTAAAAGTTTAAGAATTTATCGAATATTTTTTAAATTTTAAGAATTTATTAGATATAATTAAAGTTAATGACTAAATCTGTGATTAAAAAATGAAGATTAATATATATATATATATATATTTGCTTTTTTAAAGGTACATACAAGGTACGTCTGCAACTTCTGGGCAAGGGCTGTATGAGGGTTTTGATTGGCTATGCAACAACATTATCATCAAAGACTCTCCATGATGCTTTATATATACTTTACTAGTAATATTACTTTGAATTCTCCAATTCATTAAGAGGTGATGAATATACGTTAAAATACCACTTTATCAATGAGTATTTTTAAAAGATCAAATCAAAATCATAGAAACTGTTGAGGTTTTTCAGTTCATCGTTGCAGTATATTCTTGAGGTTTAGTGTGTTTAGTGCCTTTTGAAATAAAATAATTTCTTTTTCT

mRNA sequence

CATCGTCAACCGCTGGTATCCGTGTAATTGGTCATTGAAGAAGAAGGGATAAGGAATTTCAGGAAAGAGCTCAGGATTTCTCCGGCGTCAATCGAGATCTTAAAATGGCGGCTCTTCATGCTTCGGCCTCCCTCTCTCTCGCCGTACGCGATGCTTCCTTCGCAAGAAGAAGAGCACCACAAGTCTTTCCTCTCCACAGAGGCTCCCTTCCGAATTTATATCGACTTGGAACGACGTTTGCTACTGGCTCTCCACTCGTGTTAAGCAAGCCAACTGGTCAAAAGAAGCATAAAGTGAAACCAAATTCTGTTTCTATACGATGTGAGCAAAGTAGCCAAGAGAGTAACATTCTGGATGTTTGGCTTGGGCGGCTTGCGATGGTTGGATTTGCAATTGCAATTAGTGTTGAAATAGCAACAGGCAAGGGACTTTTAGAGAATTTTGGAGTAACGACTCCTCTGCCAAGTGTGGCCTTGGCAGTTACCGCATTGGTTGGCATACTGACAGCAGTTTTCATCTTCCAATCAGCTACCAAAAACTGAACATATCTAGATTATCTTCACACTTTATCTGTATAGTTTGTAATCCTAAAAGATTATTTCATTGATATTCATCTTCAATCGTTGTAATATGCTCGAATGCGAACAACGGGCAACCAATAGAAACTTCTTTCACGAAAATGTCTCCTACCAACATCAATGAGTCAATGACTGTTTTCAGATATGAAGAAGCTTCTCCATCAGTCTAAGTAAGTTCATTCACTCTGGCAAACAAATATACTTGAAGGAGAGACAAAGAGCTTTATTGCCTTCTGTCCCAAAGAATCAATTCTCTTTCAGCCTTTACATGTAGAAGTTTTTGGTCTAATATTCACTTGGAAGACAAGGTATCTCTCATGCCATCTCCCTCATGGGTGCAGTGATAACCAGGTTGAGGAAGCGACTCTTCCAGAACCGTGAAGTGAGAATCCTGATGGTCGGTCTTGATGCATCGGGGAAGACAACCATTTTGTACAAACTAAAACTTGGTGAAGTTGTTATGACCGTACCAACTATTGGGTTCAATGTGGAAACATTAGAATACAAAAACATTAGCTGCTCTGTCTGGGACGTTGGAGGACAAGATAAGATAAGGCCATTATGGAGACATTACTTCCAGAACACACAAGGACTTGTATATGTTGTGGACAGCGGTGACAGAGGGAGAATCTGCGAAGCCAGGAATGAGTTGCATCGCATTCTCAGTGAGCCAGAGCTAAGGAATGTAGCTGTGCTTGTGTTTGCTAACAAGCAAGATCTTCCACAATCAATGTCTGTGTCTGAAATTGCAACTAAACTTGGCCTCCACAGCCTCTCTCAAAGAAGATGGTACATACAAGGTACGTCTGCAACTTCTGGGCAAGGGCTGTATGAGGGTTTTGATTGGCTATGCAACAACATTATCATCAAAGACTCTCCATGATGCTTTATATATACTTTACTAGTAATATTACTTTGAATTCTCCAATTCATTAAGAGGTGATGAATATACGTTAAAATACCACTTTATCAATGAGTATTTTTAAAAGATCAAATCAAAATCATAGAAACTGTTGAGGTTTTTCAGTTCATCGTTGCAGTATATTCTTGAGGTTTAGTGTGTTTAGTGCCTTTTGAAATAAAATAATTTCTTTTTCT

Coding sequence (CDS)

ATGGCGGCTCTTCATGCTTCGGCCTCCCTCTCTCTCGCCGTACGCGATGCTTCCTTCGCAAGAAGAAGAGCACCACAAGTCTTTCCTCTCCACAGAGGCTCCCTTCCGAATTTATATCGACTTGGAACGACGTTTGCTACTGGCTCTCCACTCGTGTTAAGCAAGCCAACTGGTCAAAAGAAGCATAAAGTGAAACCAAATTCTGTTTCTATACGATGTGAGCAAAGTAGCCAAGAGAGTAACATTCTGGATGTTTGGCTTGGGCGGCTTGCGATGGTTGGATTTGCAATTGCAATTAGTGTTGAAATAGCAACAGGCAAGGGACTTTTAGAGAATTTTGGAGTAACGACTCCTCTGCCAAGTGTGGCCTTGGCAGTTACCGCATTGGTTGGCATACTGACAGCAGTTTTCATCTTCCAATCAGCTACCAAAAACTGA

Protein sequence

MAALHASASLSLAVRDASFARRRAPQVFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQKKHKVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLPSVALAVTALVGILTAVFIFQSATKN

Homology

[Close]

BLAST of Cp4.1LG15g04620 vs. ExPASy Swiss-Prot
Match: Q9M7I9 (Stress enhanced protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SEP1 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.3e-29
Identity = 81/147 (55.10%), Postives = 107/147 (72.79%), Query Frame = 0


Query: 1   MAALHASASLSLAVRDASFARRRAPQVFPLH--RGSLPNLYRLGTTFATGSPLVLSKPTG 60
           MA    SASL+ ++ + S A + A    P    R  +P L  + +TFA+GSPL+  K + 
Sbjct: 1   MALSQVSASLAFSLPN-SGALKLATITNPTSTCRVHVPQLAGIRSTFASGSPLLPLKLSM 60

Query: 61  QKKHKVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTP 120
            ++   +  SVSIR EQS++ S+ LD+WLGR AMVGFA+AI+VEI+TGKGLLENFGV +P
Sbjct: 61  TRRGGNRAASVSIRSEQSTEGSSGLDIWLGRGAMVGFAVAITVEISTGKGLLENFGVASP 120

Query: 121 LPSVALAVTALVGILTAVFIFQSATKN 146
           LP+VALAVTALVG+L AVFIFQS++KN
Sbjct: 121 LPTVALAVTALVGVLAAVFIFQSSSKN 146

[Close]

BLAST of Cp4.1LG15g04620 vs. NCBI nr
Match: XP_023553862.1 (stress enhanced protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273 bits (697), Expect = 5.97e-92
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MAALHASASLSLAVRDASFARRRAPQVFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK 60
           MAALHASASLSLAVRDASFARRRAPQVFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK
Sbjct: 1   MAALHASASLSLAVRDASFARRRAPQVFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK 60

Query: 61  KHKVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 120
           KHKVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP
Sbjct: 61  KHKVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 120

Query: 121 SVALAVTALVGILTAVFIFQSATKN 145
           SVALAVTALVGILTAVFIFQSATKN
Sbjct: 121 SVALAVTALVGILTAVFIFQSATKN 145

[Close]

BLAST of Cp4.1LG15g04620 vs. NCBI nr
Match: KAG7011641.1 (Stress enhanced protein 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 269 bits (688), Expect = 1.41e-90
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MAALHASASLSLAVRDASFARRRAPQVFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK 60
           MAALHASASLSLAVRDASFARRRAP+VFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK
Sbjct: 1   MAALHASASLSLAVRDASFARRRAPEVFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK 60

Query: 61  KHKVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 120
           KH VKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP
Sbjct: 61  KHTVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 120

Query: 121 SVALAVTALVGILTAVFIFQSATKN 145
           SVALAVTALVGILTAVFIFQSATKN
Sbjct: 121 SVALAVTALVGILTAVFIFQSATKN 145

[Close]

BLAST of Cp4.1LG15g04620 vs. NCBI nr
Match: XP_022972399.1 (stress enhanced protein 1, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 265 bits (676), Expect = 9.52e-89
Identity = 140/145 (96.55%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 1   MAALHASASLSLAVRDASFARRRAPQVFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK 60
           MAALHASASLSL VRDASFARRRAP+VFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK
Sbjct: 1   MAALHASASLSLVVRDASFARRRAPEVFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK 60

Query: 61  KHKVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 120
           KH VKPNSVSIRC+QSSQESNILDVWLGR AMVGFAIAISVEIATGKGLLENFGVTTPLP
Sbjct: 61  KHTVKPNSVSIRCKQSSQESNILDVWLGRFAMVGFAIAISVEIATGKGLLENFGVTTPLP 120

Query: 121 SVALAVTALVGILTAVFIFQSATKN 145
           SVALAVTALVGILTAVFIFQSATKN
Sbjct: 121 SVALAVTALVGILTAVFIFQSATKN 145

[Close]

BLAST of Cp4.1LG15g04620 vs. NCBI nr
Match: XP_022952959.1 (stress enhanced protein 1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 261 bits (668), Expect = 1.58e-87
Identity = 140/145 (96.55%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MAALHASASLSLAVRDASFARRRAPQVFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK 60
           MAALHASASLSLAVRD SFARRRAP+VFPL RGSLPN YRLGTTFATGSPLVLSKPTGQK
Sbjct: 1   MAALHASASLSLAVRDTSFARRRAPEVFPLPRGSLPNSYRLGTTFATGSPLVLSKPTGQK 60

Query: 61  KHKVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 120
           KH VKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP
Sbjct: 61  KHTVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 120

Query: 121 SVALAVTALVGILTAVFIFQSATKN 145
           SVALAVTALVGILTAVFIFQSATKN
Sbjct: 121 SVALAVTALVGILTAVFIFQSATKN 145

[Close]

BLAST of Cp4.1LG15g04620 vs. NCBI nr
Match: XP_022988996.1 (stress enhanced protein 1, chloroplastic [Cucurbita maxima] >XP_022988997.1 stress enhanced protein 1, chloroplastic [Cucurbita maxima] >XP_022988998.1 stress enhanced protein 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 233 bits (593), Expect = 4.14e-76
Identity = 126/145 (86.90%), Postives = 131/145 (90.34%), Query Frame = 0


Query: 1   MAALHASASLSLAVRDASFARRRAPQVFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK 60
           MA LHASASLSLA+RDASFAR  AP+ FPL RG LPNLYR GTTFATGSPLV+SKPTGQ 
Sbjct: 1   MAVLHASASLSLAIRDASFARS-APKPFPLRRGHLPNLYRFGTTFATGSPLVISKPTGQT 60

Query: 61  KHKVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 120
           K  +KPNSVSIRCEQSSQESN LDVWLGRLAMVGFAIAISVEIATGKGLLENFGVT PLP
Sbjct: 61  KRAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTAPLP 120

Query: 121 SVALAVTALVGILTAVFIFQSATKN 145
           S AL VTALVGILTAVFIFQSA+KN
Sbjct: 121 SAALGVTALVGILTAVFIFQSASKN 144

[Close]

BLAST of Cp4.1LG15g04620 vs. ExPASy TrEMBL
Match: A0A6J1IBF1 (stress enhanced protein 1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470966 PE=4 SV=1)

HSP 1 Score: 265 bits (676), Expect = 4.61e-89
Identity = 140/145 (96.55%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 1   MAALHASASLSLAVRDASFARRRAPQVFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK 60
           MAALHASASLSL VRDASFARRRAP+VFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK
Sbjct: 1   MAALHASASLSLVVRDASFARRRAPEVFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK 60

Query: 61  KHKVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 120
           KH VKPNSVSIRC+QSSQESNILDVWLGR AMVGFAIAISVEIATGKGLLENFGVTTPLP
Sbjct: 61  KHTVKPNSVSIRCKQSSQESNILDVWLGRFAMVGFAIAISVEIATGKGLLENFGVTTPLP 120

Query: 121 SVALAVTALVGILTAVFIFQSATKN 145
           SVALAVTALVGILTAVFIFQSATKN
Sbjct: 121 SVALAVTALVGILTAVFIFQSATKN 145

[Close]

BLAST of Cp4.1LG15g04620 vs. ExPASy TrEMBL
Match: A0A6J1GNA4 (stress enhanced protein 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111455481 PE=4 SV=1)

HSP 1 Score: 261 bits (668), Expect = 7.64e-88
Identity = 140/145 (96.55%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MAALHASASLSLAVRDASFARRRAPQVFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK 60
           MAALHASASLSLAVRD SFARRRAP+VFPL RGSLPN YRLGTTFATGSPLVLSKPTGQK
Sbjct: 1   MAALHASASLSLAVRDTSFARRRAPEVFPLPRGSLPNSYRLGTTFATGSPLVLSKPTGQK 60

Query: 61  KHKVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 120
           KH VKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP
Sbjct: 61  KHTVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 120

Query: 121 SVALAVTALVGILTAVFIFQSATKN 145
           SVALAVTALVGILTAVFIFQSATKN
Sbjct: 121 SVALAVTALVGILTAVFIFQSATKN 145

[Close]

BLAST of Cp4.1LG15g04620 vs. ExPASy TrEMBL
Match: A0A6J1JIS2 (stress enhanced protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486191 PE=4 SV=1)

HSP 1 Score: 233 bits (593), Expect = 2.00e-76
Identity = 126/145 (86.90%), Postives = 131/145 (90.34%), Query Frame = 0


Query: 1   MAALHASASLSLAVRDASFARRRAPQVFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK 60
           MA LHASASLSLA+RDASFAR  AP+ FPL RG LPNLYR GTTFATGSPLV+SKPTGQ 
Sbjct: 1   MAVLHASASLSLAIRDASFARS-APKPFPLRRGHLPNLYRFGTTFATGSPLVISKPTGQT 60

Query: 61  KHKVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 120
           K  +KPNSVSIRCEQSSQESN LDVWLGRLAMVGFAIAISVEIATGKGLLENFGVT PLP
Sbjct: 61  KRAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTAPLP 120

Query: 121 SVALAVTALVGILTAVFIFQSATKN 145
           S AL VTALVGILTAVFIFQSA+KN
Sbjct: 121 SAALGVTALVGILTAVFIFQSASKN 144

[Close]

BLAST of Cp4.1LG15g04620 vs. ExPASy TrEMBL
Match: A0A1S3C121 (stress enhanced protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495270 PE=4 SV=1)

HSP 1 Score: 231 bits (589), Expect = 7.89e-76
Identity = 126/145 (86.90%), Postives = 133/145 (91.72%), Query Frame = 0


Query: 1   MAALHASASLSLAVRDASFARRRAPQVFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK 60
           MA LHASASLSLA+RDASFAR  AP+ FPLHR  LPNLYR+GTTFATGSPLVLSKP GQK
Sbjct: 1   MAVLHASASLSLAIRDASFART-APKAFPLHRSLLPNLYRVGTTFATGSPLVLSKPIGQK 60

Query: 61  KHKVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 120
           KH VK NSVSIRCEQS+Q+SN LDVWLGR AMVGFAIAISVEIATGKGLLEN GVT+PLP
Sbjct: 61  KHAVKQNSVSIRCEQSTQQSN-LDVWLGRFAMVGFAIAISVEIATGKGLLENLGVTSPLP 120

Query: 121 SVALAVTALVGILTAVFIFQSATKN 145
           SVALAVTALVG+LTAVFIFQSATKN
Sbjct: 121 SVALAVTALVGVLTAVFIFQSATKN 143

[Close]

BLAST of Cp4.1LG15g04620 vs. ExPASy TrEMBL
Match: A0A6J1EI92 (stress enhanced protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434475 PE=4 SV=1)

HSP 1 Score: 231 bits (589), Expect = 8.16e-76
Identity = 125/145 (86.21%), Postives = 131/145 (90.34%), Query Frame = 0


Query: 1   MAALHASASLSLAVRDASFARRRAPQVFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK 60
           MA LHASASLSLA+RDASFAR  AP+ FPL RG LPNLYR GTTFATGSPLV+SKP+GQ 
Sbjct: 1   MAVLHASASLSLAIRDASFARS-APKPFPLRRGHLPNLYRFGTTFATGSPLVISKPSGQT 60

Query: 61  KHKVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 120
           K  +KPNSVSIRCEQSSQESN LDVWLGRLAMVGFAIAISVEIATGKGLLENFGVT PLP
Sbjct: 61  KRAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTAPLP 120

Query: 121 SVALAVTALVGILTAVFIFQSATKN 145
           S AL VTALVGILTAVFIFQSA+KN
Sbjct: 121 SAALGVTALVGILTAVFIFQSASKN 144

[Close]

BLAST of Cp4.1LG15g04620 vs. TAIR 10
Match: AT4G34190.1 (stress enhanced protein 1 )

HSP 1 Score: 129.0 bits (323), Expect = 3.0e-30
Identity = 81/147 (55.10%), Postives = 107/147 (72.79%), Query Frame = 0


Query: 1   MAALHASASLSLAVRDASFARRRAPQVFPLH--RGSLPNLYRLGTTFATGSPLVLSKPTG 60
           MA    SASL+ ++ + S A + A    P    R  +P L  + +TFA+GSPL+  K + 
Sbjct: 1   MALSQVSASLAFSLPN-SGALKLATITNPTSTCRVHVPQLAGIRSTFASGSPLLPLKLSM 60

Query: 61  QKKHKVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTP 120
            ++   +  SVSIR EQS++ S+ LD+WLGR AMVGFA+AI+VEI+TGKGLLENFGV +P
Sbjct: 61  TRRGGNRAASVSIRSEQSTEGSSGLDIWLGRGAMVGFAVAITVEISTGKGLLENFGVASP 120

Query: 121 LPSVALAVTALVGILTAVFIFQSATKN 146
           LP+VALAVTALVG+L AVFIFQS++KN
Sbjct: 121 LPTVALAVTALVGVLAAVFIFQSSSKN 146

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g04620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M7I9	4.3e-29	55.10	Stress enhanced protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SEP1...	[more]

BLAST of Cp4.1LG15g04620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553862.1	5.97e-92	100.00	stress enhanced protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
KAG7011641.1	1.41e-90	98.62	Stress enhanced protein 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022972399.1	9.52e-89	96.55	stress enhanced protein 1, chloroplastic-like isoform X2 [Cucurbita maxima]	[more]
XP_022952959.1	1.58e-87	96.55	stress enhanced protein 1, chloroplastic-like [Cucurbita moschata]	[more]
XP_022988996.1	4.14e-76	86.90	stress enhanced protein 1, chloroplastic [Cucurbita maxima] >XP_022988997.1 stre...	[more]

BLAST of Cp4.1LG15g04620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IBF1	4.61e-89	96.55	stress enhanced protein 1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=...	[more]
A0A6J1GNA4	7.64e-88	96.55	stress enhanced protein 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JIS2	2.00e-76	86.90	stress enhanced protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A1S3C121	7.89e-76	86.90	stress enhanced protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495270...	[more]
A0A6J1EI92	8.16e-76	86.21	stress enhanced protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Cp4.1LG15g04620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34190.1	3.0e-30	55.10	stress enhanced protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR14154:SF18	STRESS ENHANCED PROTEIN 1, CHLOROPLASTIC	coord: 33..145
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 33..145
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 82..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g04620.1	Cp4.1LG15g04620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding