Cp4.1LG15g03410 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g03410
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	tobamovirus multiplication protein 2A
Location	Cp4.1LG15: 4617650 .. 4623016 (+)
RNA-Seq Expression	Cp4.1LG15g03410
Synteny	Cp4.1LG15g03410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGGGACAGAAATGTCTTCCAATTAAAAGAGCCACTAGGGTGCAATCTCAATTGCCAACTGGCCTTTGGAGAACCGGACCGTCTTTCTCTAATTCCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTGATTTCGAGGTCCGAGAAAGCGAGCAATCTGATAATCATCGTCTCTGAATTTGTAAGTTCTCCGATTTCTTCCTTGATCGTGTTAAGTTTTCATTAGATTACGTTCGCTATTGCGGAGTTTTGTATGATTTCATTCTAAAGCCGAGAATATGGATATCGAGACGAATTGTGATTGTTTTGGTAATAATTCCGCTTTGATGGACGACGTAGGAAGGGAAGTATTCCGTTTGGTTGCTGAGATTCTACGATGCAACTTGAAGGTTATGAGGATTTTATTAGTTCAGGTGTTTTGGAAATTGGAAGCCGTCGTAGCTAAATTCTAGATTGGGATCCGTGTTTATTTGGTATTCTGAATGGAAAATTCTTGCGTAGAATTCTTAAACGCCTTGATATTAATCGCATTTAATGCACGAATGTTCTAGCGAAGTTGTAATTTGTCTTACTTCCTTGAAGTTTGGGATATTTTAGCGGTAGAAATAACTAGCTGTATGTATGATGAACTTGTTTGTTTTTTTAATGGATAGTAGTTAGCGCTCTAATGCATGTATGGTGCACATTTCAAATGTTGTTTTTAGGGATCGAAAGCGTATAGAGGATGGCCTGCAGAGGGTGCTTTGAGTGCCTGTTGAAGCTTCTGAACTTCTTCTTATCCCTTCTGGGTCTTGCCATGGTGGGGTATGGGATTTACTTGTTGGTTGAGTACTTGCAATCTCCTAGTGATATCCCAAGACCTCCGTTGAGTGGTGATCACGATCTGGTCCAGCTTGGTCGACCAATGCTAATGGCCGTGTCTCTGTCTTCTAACATCTTTGATCATCTTCCAAAAGCCTGGTATGACTTTTCCTTTTAAATATAATATGTATGTTTCTTACTGCATGTAATGACTGACTTTAGGCAGAAACAAATCTTCTGAAAAATAAAGGATATTGAGCTTCATAGGTAACTCATTGATTTGGTGGTCATATTTCCTACCCCTAGGTCAGAAGTTCGATCCCCATCGTGCCCTTCCCCCCAATTCCTGTTGTAAGAATTAGATAACCTCTCAATTTTTTAGAAAAAAAGAAAAGAAAAGAAAAAGAAGGAATGAGAGGTACATGATTAACGTCATGATGTGATGAAGTTTATAAAGCTGCTGAATTATGGATTCACTCGTTGAAGATGAAAAATTTATGAATTTCCCAAACATTCTACAATAGTGCTTTATCACTCAGTGTTTTAGAAATCTCATTTACTTTTAAGGTTCTGTTTGTTTGTTTGGAAACAGTTCAGTTTGCTGTCACAATGGATAGTTTCTATTTTTTTCAAGAACATCCCAGATGCTCACAAATATTTTAAAAAATAAAAATAAACATACAAAAGGTTGTCTATTTTATCTTTTAACAGCAGAAACGCTTGAAGTGCATCAGTGAATCACAATCGATATTGAATCTATATTGCTAAATGGAAATGTTATCACTTTTCAACTTTTATTCTTATTGCATAATTTCATGGAAACACGAGCCAGTTTATTGAGAGTCTCATCAAGTATAGGAATTGGTGTACATATTGATTTGCTGTACATTGCATAAGTTACGGCCGAGAATATAAGATATTTCGTACTGAAATAATGATATGCCATTTCGAAAGTACTGGATGTGACATCCTTGTCTCTTCTTCTTCATTATTTTTTAAAAAATTTTAATCTGAAAGGATTCTACTCCGGAATCTTCACATGTAAGCAAATTCATGTCATCGGTTAGTACATTTTAGCAGCTTACAATAGTATGGATATTTGTGGCATCTGCTTTATCTGTTTCTTCTATTTTAATTCTTTTGCAGGTTCATATACTTGTTCATTGCTGTGGGAGTCATTATCTTTGTTGTTTCTTGTTTTGGGTGCATTGGAGCTGCAACACGTAATGGATGCTGTTTAAGTTGTGTATCCTATTTGCCTGCATGGCTTCATTGTTGTTTGATTTATGAATTAGTAATGAAACAATTAGGCCACCAGGGAACAACTTGTTGGCTTCGGGATAACTACACTGTTCATAGAGATAAGATGGTGATCTTAAATATAATACAACATAGTCATGATAACATGTACGGTTTAATCTTAAAAAATTGACAGTGATCTCCCTTTTGAGTTTTATGTTACTGTATCCTTAATTAATGATCACAGTATTCGGTTTTGGTGCTTCTACTGATTTTGGTGCAAGTAGGATGTGCAGCCTTCATATTCTTTGACAAACATTGGAGAGATGTGAGTGGTTCACCTCACAAACTAAAATTGAAATTTCAGTTCATTTTCTTATTATTATTACTGTTATTCCATAGGAAATTCCTGGGGACAAAACAGGAAACTTTGATAAGATCTATGAACTCCTCGAAGACAAGTGGGAAATCATCAGATGGGTTGCACTAGGAGCTGTAATTTTTGAGGTACGTGAACCCCTTTTTTGAAGCTTTTGAATCTTAGACTGGCATGGCGGAGGCCTAATGCTGCTCTAACCTCTGAATGTCTTGCTTAGCAGAAATGTTACATGCACTGTAATTACTAAACTACTGGGATCTTCGTTATTTCTAATTCATGTGAATATATTACTTAATTTCGCATAAATATTGAATATTATTGTAATTGTTTTATTATAGAACAAAACAATCATATAATGATTAATAGAATATATCGCTAGAAATCTATTATTTAATTATCAAATGGATTTGTATCAATAATTGATGTGTTAATCCCAATTTGGTCCATTTTTGTTTTTGAATTCAAATGACATTTGAAATTCTTTTTCTTTTCTGATTTTTGGTTAATCTTATTTTAGTCTTTTTAGTTATCCACTCTACTGATTGAATTGTATCTTTTTAGTTATCTACTCTTTACTGATTGAATTGTATACCATTCTTTACTATGTTTGTATGCATTAAACATTGCACTTCTCAAGAAACAGATTGACCTGTTTCTTGCTGCTGAAACTCTGTCATCAAGAATATGTACTTCTACGCCCCTCATCAAATTTTAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNGAATTCTGGTTTAGTGCATTTTTTTCCGCATGAGTTTAACATATACGGGTTGGTAGGTTTTTTAATTCCAATTTGTGATTTGCAATATAAATTCATTTTACTTTCTCATCAATAATTAAAAATTTGGTTTTGTTGATCTCAGAAGACTTATATGTAATACTTCAATGTTGCCCTAACATGATTTGCTTTACTTTTGTTTTTCCCTTTATTGATTTAACAACTTTGTGCTTTTGCCTAAGCCACTTATCTATAAACTCCCTTTTACCAATTTGGCCATGGATTTATTTGCTTTACACTGATTGTAACTTCTTTTTTTCTCTCATTGAAATCGTGATTTCCACCTTGTAATATTGTGTTTCATTGTATTTGCAGGCTCTCCTTTTCTTGTTGGCTCTTGTGGTTCGTGCAGCAAACAGTCCTGCAGACTATGACAGTGATGATGAGTACATTGCTCCAAGGCAACAAATCCGACAACCTTTGATCAATAGGCCTGTTGCTCCTGCAACTGGTGTACCTGTTGCTGGGGCACTTGATCAACGACCAAGCCGAAATGATGCTTGGAGTACACGAATGAGGGAAAAGGTATAACCCCTTCTAGGTTGAATTTTGCCGCTGAAAATAATTAGAATGTAGAGAGACATGACAAAAACAAAAGGTCCTCCTTTCCTTTTATTCTTTCATTTACTAGAATTAAACGATGCTGATATAAACCCAAGAGCTAAAACATTGAAAGATAAAATATAGAGGAACTACAATAACTAAGTAATTCGAGGTGTTTGGACACGGTTTAACCCACAACACAATTGCATACCTTATGCTCCTCCCACTTTCTATTATGTTCAACCCCTACTAACAAGCTCCTTATCTACTTACTAATATGCCTTCAATACCCTAATAATATTTCTAACCAGTCAAATAGCGTTCCTAGTGGATACTAGGACTTCAGATGACACTTTATTATGTTCTGTATTTATGTTGGGAGATTCCATTTTTAAATTGTATAAATAGCTCATATGATTGAGTATTCATTGTTAAATAGTCCTTAGGTTCCTCTCAGATACTCATGCGGATCAATCCTTGACATTTTTATTTCAAGTTCCCAACAAAATTTGGATGTCATTATTGGTTGACACTGAGCTGAAGACAACAGAGCTCAACTAATCTGATCGATAATTCTCAATCTCAACAATTGAATTTTGATCGTTTGGAATCTATTTCAGTAGTTAGCGTTGGACCCTTTTTTGTTCAGACTTGGTTTTTTTGTATGCTCTTATCTATTCTTTCATGTCTCTCCATAAAAGTGCGGTTTCTTAAAATCTTGATTTCCAGACGTTATGCATCCTATTTGAACATTTGTAAAGCTTCCTGCCTGGGATAGTATTTTCCGTCTCTGCATGTTTGTTTCTTCCCTGCTACTAAAATCAGATCGCGGACTTGAGGACCCAAATTCTTATTTTTACTTCTATAAATTATTATGATTGAATGGTGTCTGATCAACTGCCCACCGTTATCGTATATATGTTTGGAACTCTTAATTGGAGATTTGTGTGGTAGCGTTTCCCCCTGACCATGAACTACTTCATGTATGATCTGATGAGCAGTTTCTTTTCACAATGTGCTTCTGATGTAATGTTTATAACCTCTTTTGCATAAATTGAATTCTGACGTTGGTTCTTTTTCTGTTTGAAACAGTATGGGCTGGATACTTCCGAGTTCACATACAACCCATCTGAGTCTCACAGGTTTCAGCAAGTTGCCCAACAGCCAGCAGAAGAAAAGAGCCGCTGCACCATCATGTGATCAGTATGTCTTGTATTATTTGTTTCTTACTCTACTTTAGCGTTTTAGCGGGTCGAATGCTTGTTCCACTTGTGTATAACCAAGAGGTTGTTCTGGAGGCTGTACTTGTATAACCTAAACTTTTCAGAAAAAGAAATTTGTAACTATTTGTTGTGTGAAACCGTTCCTCTACATTTGGATTTCCTTTTTGTTCTAGACGGATGGGTCAGCACAGGACCAAGGAAAATGATTGTAAGCTCCATCTCGCTTGGGAAAAGACTACTTGCTGGAAGTTGCTTTTAATTGTGAGTTCAATCCAAGTAAATATGCAATGTTATTCTGTGTCATGCTCGGTCTCCGCCCTCCTCAAGTCCTCTCGACTTCACGAGACGTCCT

mRNA sequence

TAGGGACAGAAATGTCTTCCAATTAAAAGAGCCACTAGGGTGCAATCTCAATTGCCAACTGGCCTTTGGAGAACCGGACCGTCTTTCTCTAATTCCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTGATTTCGAGGTCCGAGAAAGCGAGCAATCTGATAATCATCGTCTCTGAATTTGGATCGAAAGCGTATAGAGGATGGCCTGCAGAGGGTGCTTTGAGTGCCTGTTGAAGCTTCTGAACTTCTTCTTATCCCTTCTGGGTCTTGCCATGGTGGGGTATGGGATTTACTTGTTGGTTGAGTACTTGCAATCTCCTAGTGATATCCCAAGACCTCCGTTGAGTGGTGATCACGATCTGGTCCAGCTTGGTCGACCAATGCTAATGGCCGTGTCTCTGTCTTCTAACATCTTTGATCATCTTCCAAAAGCCTGGTTCATATACTTGTTCATTGCTGTGGGAGTCATTATCTTTGTTGTTTCTTGTTTTGGGTGCATTGGAGCTGCAACACGTAATGGATGCTGTTTAAGTTGTGTATCCTATTTGCCTGCATGGCTTCATTGTTGTTTGATTTATGAATTAGTAATGAAACAATTAGGCCACCAGGGAACAACTTGTTGGCTTCGGGATAACTACACTGTTCATAGAGATAAGATGTATTCGGTTTTGGTGCTTCTACTGATTTTGGTGCAAGTAGGATGTGCAGCCTTCATATTCTTTGACAAACATTGGAGAGATGAAATTCCTGGGGACAAAACAGGAAACTTTGATAAGATCTATGAACTCCTCGAAGACAAGTGGGAAATCATCAGATGGGTTGCACTAGGAGCTGTAATTTTTGAGGCTCTCCTTTTCTTGTTGGCTCTTGTGGTTCGTGCAGCAAACAGTCCTGCAGACTATGACAGTGATGATGAGTACATTGCTCCAAGGCAACAAATCCGACAACCTTTGATCAATAGGCCTGTTGCTCCTGCAACTGGTGTACCTGTTGCTGGGGCACTTGATCAACGACCAAGCCGAAATGATGCTTGGAGTACACGAATGAGGGAAAAGTATGGGCTGGATACTTCCGAGTTCACATACAACCCATCTGAGTCTCACAGGTTTCAGCAAGTTGCCCAACAGCCAGCAGAAGAAAAGAGCCGCTGCACCATCATGTGATCAGTATGTCTTGTATTATTTGTTTCTTACTCTACTTTAGCGTTTTAGCGGGTCGAATGCTTGTTCCACTTGTGTATAACCAAGAGGTTGTTCTGGAGGCTGTACTTGTATAACCTAAACTTTTCAGAAAAAGAAATTTGTAACTATTTGTTGTGTGAAACCGTTCCTCTACATTTGGATTTCCTTTTTGTTCTAGACGGATGGGTCAGCACAGGACCAAGGAAAATGATTGTAAGCTCCATCTCGCTTGGGAAAAGACTACTTGCTGGAAGTTGCTTTTAATTGTGAGTTCAATCCAAGTAAATATGCAATGTTATTCTGTGTCATGCTCGGTCTCCGCCCTCCTCAAGTCCTCTCGACTTCACGAGACGTCCT

Coding sequence (CDS)

ATGGCCTGCAGAGGGTGCTTTGAGTGCCTGTTGAAGCTTCTGAACTTCTTCTTATCCCTTCTGGGTCTTGCCATGGTGGGGTATGGGATTTACTTGTTGGTTGAGTACTTGCAATCTCCTAGTGATATCCCAAGACCTCCGTTGAGTGGTGATCACGATCTGGTCCAGCTTGGTCGACCAATGCTAATGGCCGTGTCTCTGTCTTCTAACATCTTTGATCATCTTCCAAAAGCCTGGTTCATATACTTGTTCATTGCTGTGGGAGTCATTATCTTTGTTGTTTCTTGTTTTGGGTGCATTGGAGCTGCAACACGTAATGGATGCTGTTTAAGTTGTGTATCCTATTTGCCTGCATGGCTTCATTGTTGTTTGATTTATGAATTAGTAATGAAACAATTAGGCCACCAGGGAACAACTTGTTGGCTTCGGGATAACTACACTGTTCATAGAGATAAGATGTATTCGGTTTTGGTGCTTCTACTGATTTTGGTGCAAGTAGGATGTGCAGCCTTCATATTCTTTGACAAACATTGGAGAGATGAAATTCCTGGGGACAAAACAGGAAACTTTGATAAGATCTATGAACTCCTCGAAGACAAGTGGGAAATCATCAGATGGGTTGCACTAGGAGCTGTAATTTTTGAGGCTCTCCTTTTCTTGTTGGCTCTTGTGGTTCGTGCAGCAAACAGTCCTGCAGACTATGACAGTGATGATGAGTACATTGCTCCAAGGCAACAAATCCGACAACCTTTGATCAATAGGCCTGTTGCTCCTGCAACTGGTGTACCTGTTGCTGGGGCACTTGATCAACGACCAAGCCGAAATGATGCTTGGAGTACACGAATGAGGGAAAAGTATGGGCTGGATACTTCCGAGTTCACATACAACCCATCTGAGTCTCACAGGTTTCAGCAAGTTGCCCAACAGCCAGCAGAAGAAAAGAGCCGCTGCACCATCATGTGA

Protein sequence

MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRPMLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAWLHCCLIYELVMKQLGHQGTTCWLRDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRDEIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSESHRFQQVAQQPAEEKSRCTIM

Homology

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BLAST of Cp4.1LG15g03410 vs. ExPASy Swiss-Prot
Match: Q9C5W7 (Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A PE=1 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 1.9e-109
Identity = 201/321 (62.62%), Postives = 234/321 (72.90%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQ-SPSDIPRPPLSGDHDLVQLGR 60
           MACRGC ECLLKLLNF L++ GL M+GYGIYL VEY + + + +     +GD   V  GR
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGR 60

Query: 61  PMLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAW 120
           P+LMAVSLSSNIFD+LPKAWFIYLFI +GV +FV+SC GC+G  +R+ CCLSC       
Sbjct: 61  PILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSC------- 120

Query: 121 LHCCLIYELVMKQLGHQGTTCWLRDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWR 180
                                             YS+L++LLILV++G AAFIFFD  WR
Sbjct: 121 ----------------------------------YSLLLILLILVELGFAAFIFFDNSWR 180

Query: 181 DEIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDE 240
           DE+P D+TGNFD IY  L + W+I+RWVALGAV+FEALLFLLAL+VRAAN+PA+YDSDDE
Sbjct: 181 DELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLALMVRAANTPAEYDSDDE 240

Query: 241 YIAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSE 300
           Y+APRQQIRQP INR  AP TGVPVA  LDQRPSR+D WS RMREKYGLDTSEFTYNPSE
Sbjct: 241 YLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSARMREKYGLDTSEFTYNPSE 280

Query: 301 SHRFQQVAQQPAEEKSRCTIM 321
           SHRFQQ+  QP EEK RCTIM
Sbjct: 301 SHRFQQMPAQPNEEKGRCTIM 280

[Close]

BLAST of Cp4.1LG15g03410 vs. ExPASy Swiss-Prot
Match: Q93XY5 (Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.7e-26
Identity = 93/310 (30.00%), Postives = 139/310 (44.84%), Query Frame = 0


Query: 3   CRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPL---SGDHDLVQLGR 62
           C   F   LK+LNF  + +G++++ Y I++L EY +     P P     SG      +  
Sbjct: 6   CHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIATSVSE 65

Query: 63  PM------LMAVSLSSNIFDH--------LPKAWFIYLFIAVGVIIFVVSCFGCIGAATR 122
           P+      + ++ L SN  DH        LP  WFIY F+AVG+++ +V+  G I A   
Sbjct: 66  PLKNPIDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEAI 125

Query: 123 NGCCLSCVSYLPAWLHCCLIYELVMKQLGHQGTTCWLRDNYTVHRDKMYSVLVLLLILVQ 182
           NGCCL                                           YS+L  LLIL++
Sbjct: 126 NGCCLC-----------------------------------------FYSILKTLLILLE 185

Query: 183 VGCAAFIFFDKHWRDEIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVV 242
               A+I  D+HW  ++P D TG    +   +E+  +I +WV +  V  + L  LLA+V+
Sbjct: 186 AALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDICKWVGIAVVAVQLLSLLLAMVL 245

Query: 243 RAANS----PADYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTR 292
           RA  S      D + DDE   PR +   PL+     P      AG+     S+ + WS+R
Sbjct: 246 RAMVSTPKPELDEEEDDE--NPRSRTWDPLL----GPQGNQAPAGS-----SKIENWSSR 263

[Close]

BLAST of Cp4.1LG15g03410 vs. ExPASy Swiss-Prot
Match: Q9SVU4 (Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.2e-25
Identity = 89/326 (27.30%), Postives = 143/326 (43.87%), Query Frame = 0


Query: 3   CRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQS-PSDIP--RPPLSGDHD------ 62
           C   F  +LK+LNF  + +G++++ Y I++L +Y    P D P  +PP +   D      
Sbjct: 6   CHVSFASILKILNFLQAFIGISIIIYSIWMLDQYNHHVPVDPPPSQPPAASSPDSSYSFS 65

Query: 63  --LVQLGR---------PMLMAVSLSSNIFD--------HLPKAWFIYLFIAVGVIIFVV 122
             ++++             +  + L S   D         LP  WFIY F+A+G+++ +V
Sbjct: 66  NSIIEINSVSDSLKNPIDFVSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAIGILVCIV 125

Query: 123 SCFGCIGAATRNGCCLSCVSYLPAWLHCCLIYELVMKQLGHQGTTCWLRDNYTVHRDKMY 182
           +  G I A   NGCCL                                           Y
Sbjct: 126 TIIGFIAAEAINGCCLC-----------------------------------------FY 185

Query: 183 SVLVLLLILVQVGCAAFIFFDKHWRDEIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIF 242
           S+L  LLI+++     FI  D+HW  ++P D TG  + +   +E+  +I +WV +  V  
Sbjct: 186 SILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGELNSLRAFIEENIDICKWVGIVVVAI 245

Query: 243 EALLFLLALVVRAANSP--ADYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGALDQRP 299
           + L  LLALV+RA  SP  ++ D +D++  P  + R  L+          P A       
Sbjct: 246 QLLSLLLALVLRAMVSPRQSELDDEDDFENPMSRARDNLLG---------PQANQTSSGS 280

[Close]

BLAST of Cp4.1LG15g03410 vs. ExPASy Swiss-Prot
Match: Q940P5 (Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.0e-19
Identity = 75/285 (26.32%), Postives = 124/285 (43.51%), Query Frame = 0


Query: 4   RGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRPMLM 63
           R C + +LKL+N  + ++G+AM+ Y ++L+ ++ +   ++P      DH           
Sbjct: 6   RSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNLPF--ADSDH----------- 65

Query: 64  AVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAWLHCC 123
                       P  WFIY F+ +G I+ VV+C G I A T NGCCL             
Sbjct: 66  ------------PVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCL------------- 125

Query: 124 LIYELVMKQLGHQGTTCWLRDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRDEIP 183
                                        +Y   ++LL +V+ G  A IF ++ W+ + P
Sbjct: 126 ----------------------------YLYMGFIVLLTMVEGGVVADIFLNRDWKKDFP 185

Query: 184 GDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRA--ANSPADYDSDDEY- 243
            D +G F +  + +E  ++I +W+ L  V  + L  L+A++++A   +    YDSDDEY 
Sbjct: 186 EDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYN 213

Query: 244 ---IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRM 283
              +A  Q  RQ     P     G P+ GA      +  AW+ R+
Sbjct: 246 VSTVALLQDARQ-----PPPYVVGEPMYGA------KPGAWTVRL 213

[Close]

BLAST of Cp4.1LG15g03410 vs. NCBI nr
Match: XP_023553897.1 (tobamovirus multiplication protein 2A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 539 bits (1388), Expect = 3.82e-192
Identity = 279/320 (87.19%), Postives = 279/320 (87.19%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAWL 120
           MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC        
Sbjct: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC-------- 120

Query: 121 HCCLIYELVMKQLGHQGTTCWLRDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YSVLVLLLILVQVGCAAFIFFDKHWRD
Sbjct: 121 ---------------------------------YSVLVLLLILVQVGCAAFIFFDKHWRD 180

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY
Sbjct: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240

Query: 241 IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES
Sbjct: 241 IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 279

Query: 301 HRFQQVAQQPAEEKSRCTIM 320
           HRFQQVAQQPAEEKSRCTIM
Sbjct: 301 HRFQQVAQQPAEEKSRCTIM 279

[Close]

BLAST of Cp4.1LG15g03410 vs. NCBI nr
Match: XP_022952814.1 (tobamovirus multiplication protein 2A [Cucurbita moschata])

HSP 1 Score: 536 bits (1382), Expect = 3.13e-191
Identity = 278/320 (86.88%), Postives = 278/320 (86.88%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNF LSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFLLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAWL 120
           MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC        
Sbjct: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC-------- 120

Query: 121 HCCLIYELVMKQLGHQGTTCWLRDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YSVLVLLLILVQVGCAAFIFFDKHWRD
Sbjct: 121 ---------------------------------YSVLVLLLILVQVGCAAFIFFDKHWRD 180

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY
Sbjct: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240

Query: 241 IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES
Sbjct: 241 IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 279

Query: 301 HRFQQVAQQPAEEKSRCTIM 320
           HRFQQVAQQPAEEKSRCTIM
Sbjct: 301 HRFQQVAQQPAEEKSRCTIM 279

[Close]

BLAST of Cp4.1LG15g03410 vs. NCBI nr
Match: XP_022971990.1 (tobamovirus multiplication protein 2A-like [Cucurbita maxima] >XP_022971992.1 tobamovirus multiplication protein 2A-like [Cucurbita maxima])

HSP 1 Score: 534 bits (1375), Expect = 3.65e-190
Identity = 276/320 (86.25%), Postives = 278/320 (86.88%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLV+YLQSPSDIPRPPLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAWL 120
           MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC        
Sbjct: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC-------- 120

Query: 121 HCCLIYELVMKQLGHQGTTCWLRDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YSVLVLLLILVQVGCAAFIFFDKHWRD
Sbjct: 121 ---------------------------------YSVLVLLLILVQVGCAAFIFFDKHWRD 180

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGDKTGNFDKIYELLEDKWEII+WVALGAVIFEALLFLLALVVRAANSPADYDSDDEY
Sbjct: 181 EIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240

Query: 241 IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPR QIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES
Sbjct: 241 IAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 279

Query: 301 HRFQQVAQQPAEEKSRCTIM 320
           HRFQQVAQQPAEEKSRCTIM
Sbjct: 301 HRFQQVAQQPAEEKSRCTIM 279

[Close]

BLAST of Cp4.1LG15g03410 vs. NCBI nr
Match: XP_022931040.1 (tobamovirus multiplication protein 2A-like [Cucurbita moschata] >KAG7036173.1 Tobamovirus multiplication protein 2A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 521 bits (1342), Expect = 3.90e-185
Identity = 268/320 (83.75%), Postives = 274/320 (85.62%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQS SD+PRPPLSGDHD++QLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPRPPLSGDHDVIQLGRP 60

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAWL 120
           MLMAVSLSSNIFD+LP+AWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC        
Sbjct: 61  MLMAVSLSSNIFDNLPRAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC-------- 120

Query: 121 HCCLIYELVMKQLGHQGTTCWLRDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YSVLVLLLILVQ+GCAAFIFFDKHWRD
Sbjct: 121 ---------------------------------YSVLVLLLILVQLGCAAFIFFDKHWRD 180

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAAN P DYDSDDEY
Sbjct: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANRPLDYDSDDEY 240

Query: 241 IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPRQQIRQPLINRPVAPATGVPVAG LDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES
Sbjct: 241 IAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 279

Query: 301 HRFQQVAQQPAEEKSRCTIM 320
           HRFQQVA QPAEEKSRCTIM
Sbjct: 301 HRFQQVAPQPAEEKSRCTIM 279

[Close]

BLAST of Cp4.1LG15g03410 vs. NCBI nr
Match: XP_023533384.1 (tobamovirus multiplication protein 2A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 520 bits (1339), Expect = 1.12e-184
Identity = 267/320 (83.44%), Postives = 274/320 (85.62%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQS SD+PRPPLSGDHD++QLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPRPPLSGDHDVIQLGRP 60

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAWL 120
           MLMAVSLSSNIFD+LP+AWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC        
Sbjct: 61  MLMAVSLSSNIFDNLPRAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC-------- 120

Query: 121 HCCLIYELVMKQLGHQGTTCWLRDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YSVLVLLLILVQ+GCAAFIFFDKHWRD
Sbjct: 121 ---------------------------------YSVLVLLLILVQLGCAAFIFFDKHWRD 180

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGD+TGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAAN P DYDSDDEY
Sbjct: 181 EIPGDRTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANRPLDYDSDDEY 240

Query: 241 IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPRQQIRQPLINRPVAPATGVPVAG LDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES
Sbjct: 241 IAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 279

Query: 301 HRFQQVAQQPAEEKSRCTIM 320
           HRFQQVA QPAEEKSRCTIM
Sbjct: 301 HRFQQVAPQPAEEKSRCTIM 279

[Close]

BLAST of Cp4.1LG15g03410 vs. ExPASy TrEMBL
Match: A0A6J1GMT3 (tobamovirus multiplication protein 2A OS=Cucurbita moschata OX=3662 GN=LOC111455402 PE=4 SV=1)

HSP 1 Score: 536 bits (1382), Expect = 1.52e-191
Identity = 278/320 (86.88%), Postives = 278/320 (86.88%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNF LSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFLLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAWL 120
           MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC        
Sbjct: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC-------- 120

Query: 121 HCCLIYELVMKQLGHQGTTCWLRDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YSVLVLLLILVQVGCAAFIFFDKHWRD
Sbjct: 121 ---------------------------------YSVLVLLLILVQVGCAAFIFFDKHWRD 180

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY
Sbjct: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240

Query: 241 IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES
Sbjct: 241 IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 279

Query: 301 HRFQQVAQQPAEEKSRCTIM 320
           HRFQQVAQQPAEEKSRCTIM
Sbjct: 301 HRFQQVAQQPAEEKSRCTIM 279

[Close]

BLAST of Cp4.1LG15g03410 vs. ExPASy TrEMBL
Match: A0A6J1I3F8 (tobamovirus multiplication protein 2A-like OS=Cucurbita maxima OX=3661 GN=LOC111470643 PE=4 SV=1)

HSP 1 Score: 534 bits (1375), Expect = 1.77e-190
Identity = 276/320 (86.25%), Postives = 278/320 (86.88%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLV+YLQSPSDIPRPPLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAWL 120
           MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC        
Sbjct: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC-------- 120

Query: 121 HCCLIYELVMKQLGHQGTTCWLRDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YSVLVLLLILVQVGCAAFIFFDKHWRD
Sbjct: 121 ---------------------------------YSVLVLLLILVQVGCAAFIFFDKHWRD 180

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGDKTGNFDKIYELLEDKWEII+WVALGAVIFEALLFLLALVVRAANSPADYDSDDEY
Sbjct: 181 EIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240

Query: 241 IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPR QIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES
Sbjct: 241 IAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 279

Query: 301 HRFQQVAQQPAEEKSRCTIM 320
           HRFQQVAQQPAEEKSRCTIM
Sbjct: 301 HRFQQVAQQPAEEKSRCTIM 279

[Close]

BLAST of Cp4.1LG15g03410 vs. ExPASy TrEMBL
Match: A0A6J1EYE4 (tobamovirus multiplication protein 2A-like OS=Cucurbita moschata OX=3662 GN=LOC111437351 PE=4 SV=1)

HSP 1 Score: 521 bits (1342), Expect = 1.89e-185
Identity = 268/320 (83.75%), Postives = 274/320 (85.62%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQS SD+PRPPLSGDHD++QLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPRPPLSGDHDVIQLGRP 60

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAWL 120
           MLMAVSLSSNIFD+LP+AWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC        
Sbjct: 61  MLMAVSLSSNIFDNLPRAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC-------- 120

Query: 121 HCCLIYELVMKQLGHQGTTCWLRDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YSVLVLLLILVQ+GCAAFIFFDKHWRD
Sbjct: 121 ---------------------------------YSVLVLLLILVQLGCAAFIFFDKHWRD 180

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAAN P DYDSDDEY
Sbjct: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANRPLDYDSDDEY 240

Query: 241 IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPRQQIRQPLINRPVAPATGVPVAG LDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES
Sbjct: 241 IAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 279

Query: 301 HRFQQVAQQPAEEKSRCTIM 320
           HRFQQVA QPAEEKSRCTIM
Sbjct: 301 HRFQQVAPQPAEEKSRCTIM 279

[Close]

BLAST of Cp4.1LG15g03410 vs. ExPASy TrEMBL
Match: A0A6J1K6M6 (tobamovirus multiplication protein 2A-like OS=Cucurbita maxima OX=3661 GN=LOC111491627 PE=4 SV=1)

HSP 1 Score: 518 bits (1334), Expect = 3.12e-184
Identity = 266/320 (83.12%), Postives = 272/320 (85.00%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQS SD+PRPPLSGDHD++QLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPRPPLSGDHDVIQLGRP 60

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAWL 120
           MLMAVSLSSNIFD+LP+AWFIYLFIAVG IIFVVSCFGCIGAATRNGCCLSC        
Sbjct: 61  MLMAVSLSSNIFDNLPRAWFIYLFIAVGAIIFVVSCFGCIGAATRNGCCLSC-------- 120

Query: 121 HCCLIYELVMKQLGHQGTTCWLRDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YSVLVLLLILVQ+GCAAFIFFDKHWRD
Sbjct: 121 ---------------------------------YSVLVLLLILVQLGCAAFIFFDKHWRD 180

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAAN P DYDSDDEY
Sbjct: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANRPVDYDSDDEY 240

Query: 241 IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPRQQIRQPLINRPVAPATGVPVAG LDQRPSRNDAWS RMREKYGLDTSEFTYNPSES
Sbjct: 241 IAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSARMREKYGLDTSEFTYNPSES 279

Query: 301 HRFQQVAQQPAEEKSRCTIM 320
           HRFQQVA QPAEEKSRCTIM
Sbjct: 301 HRFQQVAPQPAEEKSRCTIM 279

[Close]

BLAST of Cp4.1LG15g03410 vs. ExPASy TrEMBL
Match: A0A5D3E4T8 (Tobamovirus multiplication protein 2A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004130 PE=4 SV=1)

HSP 1 Score: 500 bits (1287), Expect = 4.51e-177
Identity = 257/320 (80.31%), Postives = 268/320 (83.75%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQS SD+P P LSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPGPSLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAWL 120
           MLMAVSLSSNIFD+LPKAWFIYLFIA GVI+FVVSCFGCIGAATR+GCCLSC        
Sbjct: 61  MLMAVSLSSNIFDNLPKAWFIYLFIATGVIVFVVSCFGCIGAATRSGCCLSC-------- 120

Query: 121 HCCLIYELVMKQLGHQGTTCWLRDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YS+L+LLLILVQ+GCAAFIFFDK+WRD
Sbjct: 121 ---------------------------------YSILLLLLILVQLGCAAFIFFDKNWRD 180

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGDKTGNFDKIYELLE+KW+IIRWVALG +IFEALLFLLALVVRAAN P DYDSDDEY
Sbjct: 181 EIPGDKTGNFDKIYELLENKWKIIRWVALGTIIFEALLFLLALVVRAANRPVDYDSDDEY 240

Query: 241 IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPRQQIRQPLINRPVAPATGVPVAG LDQRPSRNDAWS RMREKYGLDTSEFTYNPSES
Sbjct: 241 IAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSARMREKYGLDTSEFTYNPSES 279

Query: 301 HRFQQVAQQPAEEKSRCTIM 320
           HRFQQVA Q AEEKSRCTIM
Sbjct: 301 HRFQQVAPQAAEEKSRCTIM 279

[Close]

BLAST of Cp4.1LG15g03410 vs. TAIR 10
Match: AT1G32400.1 (tobamovirus multiplication 2A )

HSP 1 Score: 397.1 bits (1019), Expect = 1.3e-110
Identity = 201/321 (62.62%), Postives = 234/321 (72.90%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQ-SPSDIPRPPLSGDHDLVQLGR 60
           MACRGC ECLLKLLNF L++ GL M+GYGIYL VEY + + + +     +GD   V  GR
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGR 60

Query: 61  PMLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAW 120
           P+LMAVSLSSNIFD+LPKAWFIYLFI +GV +FV+SC GC+G  +R+ CCLSC       
Sbjct: 61  PILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSC------- 120

Query: 121 LHCCLIYELVMKQLGHQGTTCWLRDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWR 180
                                             YS+L++LLILV++G AAFIFFD  WR
Sbjct: 121 ----------------------------------YSLLLILLILVELGFAAFIFFDNSWR 180

Query: 181 DEIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDE 240
           DE+P D+TGNFD IY  L + W+I+RWVALGAV+FEALLFLLAL+VRAAN+PA+YDSDDE
Sbjct: 181 DELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLALMVRAANTPAEYDSDDE 240

Query: 241 YIAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSE 300
           Y+APRQQIRQP INR  AP TGVPVA  LDQRPSR+D WS RMREKYGLDTSEFTYNPSE
Sbjct: 241 YLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSARMREKYGLDTSEFTYNPSE 280

Query: 301 SHRFQQVAQQPAEEKSRCTIM 321
           SHRFQQ+  QP EEK RCTIM
Sbjct: 301 SHRFQQMPAQPNEEKGRCTIM 280

[Close]

BLAST of Cp4.1LG15g03410 vs. TAIR 10
Match: AT1G32400.2 (tobamovirus multiplication 2A )

HSP 1 Score: 397.1 bits (1019), Expect = 1.3e-110
Identity = 201/321 (62.62%), Postives = 234/321 (72.90%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQ-SPSDIPRPPLSGDHDLVQLGR 60
           MACRGC ECLLKLLNF L++ GL M+GYGIYL VEY + + + +     +GD   V  GR
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGR 60

Query: 61  PMLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAW 120
           P+LMAVSLSSNIFD+LPKAWFIYLFI +GV +FV+SC GC+G  +R+ CCLSC       
Sbjct: 61  PILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSC------- 120

Query: 121 LHCCLIYELVMKQLGHQGTTCWLRDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWR 180
                                             YS+L++LLILV++G AAFIFFD  WR
Sbjct: 121 ----------------------------------YSLLLILLILVELGFAAFIFFDNSWR 180

Query: 181 DEIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDE 240
           DE+P D+TGNFD IY  L + W+I+RWVALGAV+FEALLFLLAL+VRAAN+PA+YDSDDE
Sbjct: 181 DELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLALMVRAANTPAEYDSDDE 240

Query: 241 YIAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSE 300
           Y+APRQQIRQP INR  AP TGVPVA  LDQRPSR+D WS RMREKYGLDTSEFTYNPSE
Sbjct: 241 YLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSARMREKYGLDTSEFTYNPSE 280

Query: 301 SHRFQQVAQQPAEEKSRCTIM 321
           SHRFQQ+  QP EEK RCTIM
Sbjct: 301 SHRFQQMPAQPNEEKGRCTIM 280

[Close]

BLAST of Cp4.1LG15g03410 vs. TAIR 10
Match: AT1G32400.3 (tobamovirus multiplication 2A )

HSP 1 Score: 397.1 bits (1019), Expect = 1.3e-110
Identity = 201/321 (62.62%), Postives = 234/321 (72.90%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQ-SPSDIPRPPLSGDHDLVQLGR 60
           MACRGC ECLLKLLNF L++ GL M+GYGIYL VEY + + + +     +GD   V  GR
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGR 60

Query: 61  PMLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAW 120
           P+LMAVSLSSNIFD+LPKAWFIYLFI +GV +FV+SC GC+G  +R+ CCLSC       
Sbjct: 61  PILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSC------- 120

Query: 121 LHCCLIYELVMKQLGHQGTTCWLRDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWR 180
                                             YS+L++LLILV++G AAFIFFD  WR
Sbjct: 121 ----------------------------------YSLLLILLILVELGFAAFIFFDNSWR 180

Query: 181 DEIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDE 240
           DE+P D+TGNFD IY  L + W+I+RWVALGAV+FEALLFLLAL+VRAAN+PA+YDSDDE
Sbjct: 181 DELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLALMVRAANTPAEYDSDDE 240

Query: 241 YIAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSE 300
           Y+APRQQIRQP INR  AP TGVPVA  LDQRPSR+D WS RMREKYGLDTSEFTYNPSE
Sbjct: 241 YLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSARMREKYGLDTSEFTYNPSE 280

Query: 301 SHRFQQVAQQPAEEKSRCTIM 321
           SHRFQQ+  QP EEK RCTIM
Sbjct: 301 SHRFQQMPAQPNEEKGRCTIM 280

[Close]

BLAST of Cp4.1LG15g03410 vs. TAIR 10
Match: AT2G20230.1 (Tetraspanin family protein )

HSP 1 Score: 119.8 bits (299), Expect = 4.1e-27
Identity = 93/310 (30.00%), Postives = 139/310 (44.84%), Query Frame = 0


Query: 3   CRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPL---SGDHDLVQLGR 62
           C   F   LK+LNF  + +G++++ Y I++L EY +     P P     SG      +  
Sbjct: 6   CHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIATSVSE 65

Query: 63  PM------LMAVSLSSNIFDH--------LPKAWFIYLFIAVGVIIFVVSCFGCIGAATR 122
           P+      + ++ L SN  DH        LP  WFIY F+AVG+++ +V+  G I A   
Sbjct: 66  PLKNPIDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEAI 125

Query: 123 NGCCLSCVSYLPAWLHCCLIYELVMKQLGHQGTTCWLRDNYTVHRDKMYSVLVLLLILVQ 182
           NGCCL                                           YS+L  LLIL++
Sbjct: 126 NGCCLC-----------------------------------------FYSILKTLLILLE 185

Query: 183 VGCAAFIFFDKHWRDEIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVV 242
               A+I  D+HW  ++P D TG    +   +E+  +I +WV +  V  + L  LLA+V+
Sbjct: 186 AALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDICKWVGIAVVAVQLLSLLLAMVL 245

Query: 243 RAANS----PADYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTR 292
           RA  S      D + DDE   PR +   PL+     P      AG+     S+ + WS+R
Sbjct: 246 RAMVSTPKPELDEEEDDE--NPRSRTWDPLL----GPQGNQAPAGS-----SKIENWSSR 263

[Close]

BLAST of Cp4.1LG15g03410 vs. TAIR 10
Match: AT4G28770.1 (Tetraspanin family protein )

HSP 1 Score: 117.9 bits (294), Expect = 1.5e-26
Identity = 89/326 (27.30%), Postives = 143/326 (43.87%), Query Frame = 0


Query: 3   CRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQS-PSDIP--RPPLSGDHD------ 62
           C   F  +LK+LNF  + +G++++ Y I++L +Y    P D P  +PP +   D      
Sbjct: 6   CHVSFASILKILNFLQAFIGISIIIYSIWMLDQYNHHVPVDPPPSQPPAASSPDSSYSFS 65

Query: 63  --LVQLGR---------PMLMAVSLSSNIFD--------HLPKAWFIYLFIAVGVIIFVV 122
             ++++             +  + L S   D         LP  WFIY F+A+G+++ +V
Sbjct: 66  NSIIEINSVSDSLKNPIDFVSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAIGILVCIV 125

Query: 123 SCFGCIGAATRNGCCLSCVSYLPAWLHCCLIYELVMKQLGHQGTTCWLRDNYTVHRDKMY 182
           +  G I A   NGCCL                                           Y
Sbjct: 126 TIIGFIAAEAINGCCLC-----------------------------------------FY 185

Query: 183 SVLVLLLILVQVGCAAFIFFDKHWRDEIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIF 242
           S+L  LLI+++     FI  D+HW  ++P D TG  + +   +E+  +I +WV +  V  
Sbjct: 186 SILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGELNSLRAFIEENIDICKWVGIVVVAI 245

Query: 243 EALLFLLALVVRAANSP--ADYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGALDQRP 299
           + L  LLALV+RA  SP  ++ D +D++  P  + R  L+          P A       
Sbjct: 246 QLLSLLLALVLRAMVSPRQSELDDEDDFENPMSRARDNLLG---------PQANQTSSGS 280

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g03410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5W7	1.9e-109	62.62	Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A P...	[more]
Q93XY5	5.7e-26	30.00	Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1	[more]
Q9SVU4	2.2e-25	27.30	Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1	[more]
Q940P5	1.0e-19	26.32	Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1	[more]

BLAST of Cp4.1LG15g03410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553897.1	3.82e-192	87.19	tobamovirus multiplication protein 2A-like [Cucurbita pepo subsp. pepo]	[more]
XP_022952814.1	3.13e-191	86.88	tobamovirus multiplication protein 2A [Cucurbita moschata]	[more]
XP_022971990.1	3.65e-190	86.25	tobamovirus multiplication protein 2A-like [Cucurbita maxima] >XP_022971992.1 to...	[more]
XP_022931040.1	3.90e-185	83.75	tobamovirus multiplication protein 2A-like [Cucurbita moschata] >KAG7036173.1 To...	[more]
XP_023533384.1	1.12e-184	83.44	tobamovirus multiplication protein 2A-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG15g03410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GMT3	1.52e-191	86.88	tobamovirus multiplication protein 2A OS=Cucurbita moschata OX=3662 GN=LOC111455...	[more]
A0A6J1I3F8	1.77e-190	86.25	tobamovirus multiplication protein 2A-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1EYE4	1.89e-185	83.75	tobamovirus multiplication protein 2A-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1K6M6	3.12e-184	83.13	tobamovirus multiplication protein 2A-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A5D3E4T8	4.51e-177	80.31	Tobamovirus multiplication protein 2A OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Cp4.1LG15g03410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32400.1	1.3e-110	62.62	tobamovirus multiplication 2A	[more]
AT1G32400.2	1.3e-110	62.62	tobamovirus multiplication 2A	[more]
AT1G32400.3	1.3e-110	62.62	tobamovirus multiplication 2A	[more]
AT2G20230.1	4.1e-27	30.00	Tetraspanin family protein	[more]
AT4G28770.1	1.5e-26	27.30	Tetraspanin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 9..114 e-value: 4.2E-10 score: 39.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 299..320
None	No IPR available	PANTHER	PTHR19282:SF417	TOBAMOVIRUS MULTIPLICATION PROTEIN 2A	coord: 2..293
None	No IPR available	PANTHER	PTHR19282	TETRASPANIN	coord: 2..293

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g03410.1	Cp4.1LG15g03410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane