Cp4.1LG15g03390 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG15g03390
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description40S ribosomal protein S5-like
LocationCp4.1LG15: 4539555 .. 4541406 (-)
RNA-Seq ExpressionCp4.1LG15g03390
SyntenyCp4.1LG15g03390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTTTCTTTTCCTCCACGCCCTTTGTTCATCCTTTCACATTAGCCGCTTCTCGCCTTTGCCGCCCGATTACGGTATATCACCTTGGCGTTCATACTTTTCATTCTGTAATGCCTATACTTGTTTTTTTTTGTTTGGAGTTCTTCAGCATTGTATGCGTATTCCGAAGTCGACTTGAGATTTAGTTTTGTTGGAAGTAACTGGTGAGGTTTTCGAGTTTTGTTGTTCCATAGATTTGCTGGGATTGGTGAAACTTTACGTGCTTCATGTCTTGGATTGAAATACTTGATCTGTTGTGTTTCTATTACTCTTGTTCATCTCAGTTCTTCTTTCTTAGTTGTCTTTGAAAATGAGTTCTGTTAGGATTGTATTTAGTTTCAACTCTCAAGTGATAAGTCCAGGATATTTGGTTTTGGAATTGGAAGAACAACTTTTATGGCCCAACCTTGTCTTATGATTTCAATTTGAGAAGAAATTTGGATTATAGACACTCCTTGATCCTTCCTATTATCTAATTTTTGAATTGATCTTTTGGAACTCTTTATTTGAATTCCTGATATTGGCTGTATTTTTGGAGGGAAAATGTCGGGTTTTGTATTGATCGTTGTGGAGAAGAGGAATTTATGAGCATATAATTTGGACATCATGGTAGCAAATGAAAGTGGCTAACCCAACGATAGCAAATATTGCTTTTTGGGCTTTTCCTTTTGGGCTTCTGGGCTTCCCTTGAGGCTTTAAAACACTCATGCTTGGAAAAGGCTTTAAAACACTCTTGCTTGGAAAAGGTTTCCATGTCTTTATAGGATGTTTCGTTCTCCTCACCAACTAATGTGGGATTCTCACAATCCACCCCCCTTTCGGGGCCCGGCGTCCTTACTGGCACACCGCCTTGTGTCTGTCCCCCTTCGGGGAACAACCGCCTCGCTAGCACATTGCTCGGTGCTTGACTCTCATACCATTTGTAACGGCTTAGGCCCATCACTAGCAAATGTTGTCTTCTTTGGACTTTATCTTTCGGGCTTCTCTTCATGGCTTTAAAACGCGTCTGCTAGGGAAAGGTTTCCACACCCTTATAAAGCTTCCCCTCATGGCTTTAAAACGGTCTGTCAGGGAAAGGTTTCCACACTAAGAGTGTTCGTTCTCGTTTCCAACCAATGTGGGATTCTCACAAATTAGCAACCCAACCAATCAGCACTCACTTTTCTTGTGTTTGATGTTGTTCAGGAACAATGGCTGTTGAAGTTGAAGTGGCAAACCAGGAACTGAGCCAGACACATAACGATGTGAAGCTATTCAATCGGTGGAGCTTCGATGATATCCATGTGAACGACATGTCTCTGGTTGATTACATCGGGGTTGCTCCTTCCAAGCATGCTACCTATGTCCCCCACACTGCTGGGAGGTACTCTGTCAAGCGTTTTCGAAAAGCTCAGTGCCCAATTGTGGAGAGGCTCACAAATTCACTTATGATGCACGGTAGAAACAATGGGAAGAAACTCATGGCAGTAAGGATTATTAAGCATGCAATGGACATAATTCATCTTCTAACTGATCTCAACCCAATTCAAGTTATTGTTGATGCCGTTGTTAACAGTGGACCACGTGAAGACGCTACTCGAATCGGTTCAGCCGGTGTTGTTAGGCGTCAAGCTGTTGATATATCCCCTCTGCGACGCGTTAACCAAGCAATATATCTTCTTACAACCGGTGCTCGTGAAGCAGCCTTTAGAAATATCAAGACAATTGCAGAATGCTTGGCTGATGAACTTATTAATGCAGCAAAGGGTTCATCTAACAGTTATGCTATCAAGAAAAAAGATGAGGTTGAGAGAGTTGCAAAGGCAAATCGTTGA

mRNA sequence

GTTTTTCTTTTCCTCCACGCCCTTTGTTCATCCTTTCACATTAGCCGCTTCTCGCCTTTGCCGCCCGATTACGGAACAATGGCTGTTGAAGTTGAAGTGGCAAACCAGGAACTGAGCCAGACACATAACGATGTGAAGCTATTCAATCGGTGGAGCTTCGATGATATCCATGTGAACGACATGTCTCTGGTTGATTACATCGGGGTTGCTCCTTCCAAGCATGCTACCTATGTCCCCCACACTGCTGGGAGGTACTCTGTCAAGCGTTTTCGAAAAGCTCAGTGCCCAATTGTGGAGAGGCTCACAAATTCACTTATGATGCACGGTAGAAACAATGGGAAGAAACTCATGGCAGTAAGGATTATTAAGCATGCAATGGACATAATTCATCTTCTAACTGATCTCAACCCAATTCAAGTTATTGTTGATGCCGTTGTTAACAGTGGACCACGTGAAGACGCTACTCGAATCGGTTCAGCCGGTGTTGTTAGGCGTCAAGCTGTTGATATATCCCCTCTGCGACGCGTTAACCAAGCAATATATCTTCTTACAACCGGTGCTCGTGAAGCAGCCTTTAGAAATATCAAGACAATTGCAGAATGCTTGGCTGATGAACTTATTAATGCAGCAAAGGGTTCATCTAACAGTTATGCTATCAAGAAAAAAGATGAGGTTGAGAGAGTTGCAAAGGCAAATCGTTGA

Coding sequence (CDS)

GTTTTTCTTTTCCTCCACGCCCTTTGTTCATCCTTTCACATTAGCCGCTTCTCGCCTTTGCCGCCCGATTACGGAACAATGGCTGTTGAAGTTGAAGTGGCAAACCAGGAACTGAGCCAGACACATAACGATGTGAAGCTATTCAATCGGTGGAGCTTCGATGATATCCATGTGAACGACATGTCTCTGGTTGATTACATCGGGGTTGCTCCTTCCAAGCATGCTACCTATGTCCCCCACACTGCTGGGAGGTACTCTGTCAAGCGTTTTCGAAAAGCTCAGTGCCCAATTGTGGAGAGGCTCACAAATTCACTTATGATGCACGGTAGAAACAATGGGAAGAAACTCATGGCAGTAAGGATTATTAAGCATGCAATGGACATAATTCATCTTCTAACTGATCTCAACCCAATTCAAGTTATTGTTGATGCCGTTGTTAACAGTGGACCACGTGAAGACGCTACTCGAATCGGTTCAGCCGGTGTTGTTAGGCGTCAAGCTGTTGATATATCCCCTCTGCGACGCGTTAACCAAGCAATATATCTTCTTACAACCGGTGCTCGTGAAGCAGCCTTTAGAAATATCAAGACAATTGCAGAATGCTTGGCTGATGAACTTATTAATGCAGCAAAGGGTTCATCTAACAGTTATGCTATCAAGAAAAAAGATGAGGTTGAGAGAGTTGCAAAGGCAAATCGTTGA

Protein sequence

VFLFLHALCSSFHISRFSPLPPDYGTMAVEVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR
Homology
[Close]
BLAST of Cp4.1LG15g03390 vs. ExPASy Swiss-Prot
Match: Q9ZUT9 (40S ribosomal protein S5-1 OS=Arabidopsis thaliana OX=3702 GN=RPS5A PE=1 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 3.1e-98
Identity = 181/207 (87.44%), Postives = 194/207 (93.72%), Query Frame = 0 

Query: 27  MAVEVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYS 86
           MA   E+  +   Q  N+VKLFNRWSFDD+ V D+SLVDYIGV PSKHAT+VPHTAGRYS
Sbjct: 1   MAASAEIDAEIQQQLTNEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 60

Query: 87  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVV 146
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAM+IIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 147 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 206
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 180

Query: 207 INAAKGSSNSYAIKKKDEVERVAKANR 234
           INAAKGSSNSYAIKKKDE+ERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Cp4.1LG15g03390 vs. ExPASy Swiss-Prot
Match: O65731 (40S ribosomal protein S5 (Fragment) OS=Cicer arietinum OX=3827 GN=RPS5 PE=2 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 1.3e-96
Identity = 179/193 (92.75%), Postives = 188/193 (97.41%), Query Frame = 0 

Query: 41  THNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYSVKRFRKAQCPIVER 100
           T  +VKLFNRWSFDD+ ++D+SL+DYIGV PSKHATYVPHTAGRYSVKRFRKAQCPIVER
Sbjct: 5   TQIEVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVER 64

Query: 101 LTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSA 160
           LTNSLMMHGRNNGKKLMAVRIIKHAM+IIHLLTD NPIQVIVDAVVNSGPREDATRIGSA
Sbjct: 65  LTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSA 124

Query: 161 GVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIK 220
           GVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIK+IAECLADELINAAKGSSNSYAIK
Sbjct: 125 GVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIK 184

Query: 221 KKDEVERVAKANR 234
           KKDE+ERVAKANR
Sbjct: 185 KKDEIERVAKANR 197

[Close]
BLAST of Cp4.1LG15g03390 vs. ExPASy Swiss-Prot
Match: P51427 (40S ribosomal protein S5-2 OS=Arabidopsis thaliana OX=3702 GN=RPS5B PE=1 SV=2)

HSP 1 Score: 348.2 bits (892), Expect = 7.2e-95
Identity = 175/207 (84.54%), Postives = 192/207 (92.75%), Query Frame = 0 

Query: 27  MAVEVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYS 86
           MA   +V  +      N+VKLFNRW++DD+ V D+SLVDYIGV  +KHAT+VPHTAGRYS
Sbjct: 1   MATAADVDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 60

Query: 87  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVV 146
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAM+IIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 147 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 206
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 180

Query: 207 INAAKGSSNSYAIKKKDEVERVAKANR 234
           INAAKGSSNSYAIKKKDE+ERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Cp4.1LG15g03390 vs. ExPASy Swiss-Prot
Match: Q5E988 (40S ribosomal protein S5 OS=Bos taurus OX=9913 GN=RPS5 PE=2 SV=3)

HSP 1 Score: 306.6 bits (784), Expect = 2.4e-82
Identity = 155/204 (75.98%), Postives = 180/204 (88.24%), Query Frame = 0 

Query: 30  EVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYSVKR 89
           E E A   +++T  D+KLF +WS DD+ +ND+SL DYI V   K+A Y+PH+AGRY+ KR
Sbjct: 3   EWETAAPAVAET-PDIKLFGKWSTDDVQINDISLQDYIAV-KEKYAKYLPHSAGRYAAKR 62

Query: 90  FRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVVNSG 149
           FRKAQCPIVERLTNS+MMHGRNNGKKLM VRI+KHA +IIHLLT  NP+QV+V+A++NSG
Sbjct: 63  FRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSG 122

Query: 150 PREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINA 209
           PRED+TRIG AG VRRQAVD+SPLRRVNQAI+LL TGAREAAFRNIKTIAECLADELINA
Sbjct: 123 PREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINA 182

Query: 210 AKGSSNSYAIKKKDEVERVAKANR 234
           AKGSSNSYAIKKKDE+ERVAK+NR
Sbjct: 183 AKGSSNSYAIKKKDELERVAKSNR 204

[Close]
BLAST of Cp4.1LG15g03390 vs. ExPASy Swiss-Prot
Match: P46782 (40S ribosomal protein S5 OS=Homo sapiens OX=9606 GN=RPS5 PE=1 SV=4)

HSP 1 Score: 306.6 bits (784), Expect = 2.4e-82
Identity = 155/204 (75.98%), Postives = 180/204 (88.24%), Query Frame = 0 

Query: 30  EVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYSVKR 89
           E E A   +++T  D+KLF +WS DD+ +ND+SL DYI V   K+A Y+PH+AGRY+ KR
Sbjct: 3   EWETAAPAVAET-PDIKLFGKWSTDDVQINDISLQDYIAV-KEKYAKYLPHSAGRYAAKR 62

Query: 90  FRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVVNSG 149
           FRKAQCPIVERLTNS+MMHGRNNGKKLM VRI+KHA +IIHLLT  NP+QV+V+A++NSG
Sbjct: 63  FRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSG 122

Query: 150 PREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINA 209
           PRED+TRIG AG VRRQAVD+SPLRRVNQAI+LL TGAREAAFRNIKTIAECLADELINA
Sbjct: 123 PREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINA 182

Query: 210 AKGSSNSYAIKKKDEVERVAKANR 234
           AKGSSNSYAIKKKDE+ERVAK+NR
Sbjct: 183 AKGSSNSYAIKKKDELERVAKSNR 204

[Close]
BLAST of Cp4.1LG15g03390 vs. NCBI nr
Match: KAG6571821.1 (40S ribosomal protein S5-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 439 bits (1128), Expect = 1.37e-154
Identity = 229/239 (95.82%), Postives = 229/239 (95.82%), Query Frame = 0 

Query: 1   VFLFLHALCSSFHISRFSPLPPDY------GTMAVEVEVANQELSQTHNDVKLFNRWSFD 60
           VF FLHALC S HISRFSPLPPDY      GTMAVEVEVANQELSQTHNDVKLFNRWSFD
Sbjct: 6   VFSFLHALCLSLHISRFSPLPPDYVLLEVTGTMAVEVEVANQELSQTHNDVKLFNRWSFD 65

Query: 61  DIHVNDMSLVDYIGVAPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGK 120
           DIHVNDMSLVDYIGVAPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGK
Sbjct: 66  DIHVNDMSLVDYIGVAPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGK 125

Query: 121 KLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLR 180
           KLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLR
Sbjct: 126 KLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLR 185

Query: 181 RVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 233
            VNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR
Sbjct: 186 CVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 244

[Close]
BLAST of Cp4.1LG15g03390 vs. NCBI nr
Match: XP_023554676.1 (40S ribosomal protein S5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 401 bits (1030), Expect = 3.13e-140
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0 

Query: 27  MAVEVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYS 86
           MAVEVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYS
Sbjct: 1   MAVEVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYS 60

Query: 87  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVV 146
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVV 120

Query: 147 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 206
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 207 INAAKGSSNSYAIKKKDEVERVAKANR 233
           INAAKGSSNSYAIKKKDEVERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEVERVAKANR 207

[Close]
BLAST of Cp4.1LG15g03390 vs. NCBI nr
Match: XP_022971999.1 (40S ribosomal protein S5-like [Cucurbita maxima])

HSP 1 Score: 395 bits (1015), Expect = 6.05e-138
Identity = 203/207 (98.07%), Postives = 206/207 (99.52%), Query Frame = 0 

Query: 27  MAVEVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYS 86
           MAVEV+VANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYS
Sbjct: 1   MAVEVDVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYS 60

Query: 87  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVV 146
           VKRFRKA+CPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDA+V
Sbjct: 61  VKRFRKAKCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAIV 120

Query: 147 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 206
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 207 INAAKGSSNSYAIKKKDEVERVAKANR 233
           INAAKGSSNSYAIKKKDEVE VAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEVEGVAKANR 207

[Close]
BLAST of Cp4.1LG15g03390 vs. NCBI nr
Match: XP_038888890.1 (40S ribosomal protein S5-like isoform X1 [Benincasa hispida])

HSP 1 Score: 388 bits (997), Expect = 5.52e-135
Identity = 197/210 (93.81%), Postives = 206/210 (98.10%), Query Frame = 0 

Query: 24  YGTMAVEVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAG 83
           YG MAVEV+V NQEL+Q H+DVKLFNRW+FDD+ VND+SLVDYIGVAP+KHATYVPHTAG
Sbjct: 12  YGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAG 71

Query: 84  RYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVD 143
           RYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAM+IIHLLTDLNPIQVIVD
Sbjct: 72  RYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVD 131

Query: 144 AVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLA 203
           AVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLA
Sbjct: 132 AVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLA 191

Query: 204 DELINAAKGSSNSYAIKKKDEVERVAKANR 233
           DELINAAKGSSNSYAIKKKDE+ERVAKANR
Sbjct: 192 DELINAAKGSSNSYAIKKKDEIERVAKANR 221

[Close]
BLAST of Cp4.1LG15g03390 vs. NCBI nr
Match: XP_022932519.1 (40S ribosomal protein S5 [Cucurbita moschata] >KAG6588507.1 40S ribosomal protein S5-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG6588528.1 40S ribosomal protein S5-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 387 bits (994), Expect = 9.60e-135
Identity = 198/207 (95.65%), Postives = 204/207 (98.55%), Query Frame = 0 

Query: 27  MAVEVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYS 86
           MAVEV+V NQEL+Q H+DVKLFNRW+FDD+HVNDMSL DYIGVAPSKHATYVPHTAGRYS
Sbjct: 1   MAVEVDVVNQELTQPHHDVKLFNRWTFDDVHVNDMSLGDYIGVAPSKHATYVPHTAGRYS 60

Query: 87  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVV 146
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAM+IIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 147 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 206
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 207 INAAKGSSNSYAIKKKDEVERVAKANR 233
           INAAKGSSNSYAIKKKDEVERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEVERVAKANR 207

[Close]
BLAST of Cp4.1LG15g03390 vs. ExPASy TrEMBL
Match: A0A6J1IA67 (40S ribosomal protein S5-like OS=Cucurbita maxima OX=3661 GN=LOC111470649 PE=3 SV=1)

HSP 1 Score: 395 bits (1015), Expect = 2.93e-138
Identity = 203/207 (98.07%), Postives = 206/207 (99.52%), Query Frame = 0 

Query: 27  MAVEVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYS 86
           MAVEV+VANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYS
Sbjct: 1   MAVEVDVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYS 60

Query: 87  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVV 146
           VKRFRKA+CPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDA+V
Sbjct: 61  VKRFRKAKCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAIV 120

Query: 147 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 206
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 207 INAAKGSSNSYAIKKKDEVERVAKANR 233
           INAAKGSSNSYAIKKKDEVE VAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEVEGVAKANR 207

[Close]
BLAST of Cp4.1LG15g03390 vs. ExPASy TrEMBL
Match: A0A6J1EX77 (40S ribosomal protein S5 OS=Cucurbita moschata OX=3662 GN=LOC111439005 PE=3 SV=1)

HSP 1 Score: 387 bits (994), Expect = 4.65e-135
Identity = 198/207 (95.65%), Postives = 204/207 (98.55%), Query Frame = 0 

Query: 27  MAVEVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYS 86
           MAVEV+V NQEL+Q H+DVKLFNRW+FDD+HVNDMSL DYIGVAPSKHATYVPHTAGRYS
Sbjct: 1   MAVEVDVVNQELTQPHHDVKLFNRWTFDDVHVNDMSLGDYIGVAPSKHATYVPHTAGRYS 60

Query: 87  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVV 146
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAM+IIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 147 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 206
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 207 INAAKGSSNSYAIKKKDEVERVAKANR 233
           INAAKGSSNSYAIKKKDEVERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEVERVAKANR 207

[Close]
BLAST of Cp4.1LG15g03390 vs. ExPASy TrEMBL
Match: A0A6J1I1L9 (40S ribosomal protein S5 OS=Cucurbita maxima OX=3661 GN=LOC111469027 PE=3 SV=1)

HSP 1 Score: 386 bits (992), Expect = 9.37e-135
Identity = 198/207 (95.65%), Postives = 204/207 (98.55%), Query Frame = 0 

Query: 27  MAVEVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYS 86
           MAVEV+V NQEL+Q HNDVKLFNRW+FDD++VNDMSL DYIGVAPSKHATYVPHTAGRYS
Sbjct: 1   MAVEVDVVNQELTQPHNDVKLFNRWTFDDVNVNDMSLGDYIGVAPSKHATYVPHTAGRYS 60

Query: 87  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVV 146
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAM+IIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 147 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 206
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 207 INAAKGSSNSYAIKKKDEVERVAKANR 233
           INAAKGSSNSYAIKKKDEVERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEVERVAKANR 207

[Close]
BLAST of Cp4.1LG15g03390 vs. ExPASy TrEMBL
Match: A0A1S3C3S7 (40S ribosomal protein S5-like OS=Cucumis melo OX=3656 GN=LOC103496679 PE=3 SV=1)

HSP 1 Score: 388 bits (996), Expect = 1.19e-134
Identity = 197/209 (94.26%), Postives = 206/209 (98.56%), Query Frame = 0 

Query: 25  GTMAVEVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGR 84
           GTMAVEV+V NQEL+Q H+DVKLFNRW+FDD+ VND+SLVDYIGVAP+KHATYVPHTAGR
Sbjct: 45  GTMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGR 104

Query: 85  YSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDA 144
           YSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAM+IIHLLTDLNPIQVIVDA
Sbjct: 105 YSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDA 164

Query: 145 VVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLAD 204
           VVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLAD
Sbjct: 165 VVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLAD 224

Query: 205 ELINAAKGSSNSYAIKKKDEVERVAKANR 233
           ELINAAKGSSNSYAIKKKDE+ERVAKANR
Sbjct: 225 ELINAAKGSSNSYAIKKKDEIERVAKANR 253

[Close]
BLAST of Cp4.1LG15g03390 vs. ExPASy TrEMBL
Match: A0A5D3E4H0 (40S ribosomal protein S5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001940 PE=3 SV=1)

HSP 1 Score: 386 bits (991), Expect = 3.61e-134
Identity = 196/209 (93.78%), Postives = 207/209 (99.04%), Query Frame = 0 

Query: 25  GTMAVEVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGR 84
           G MAVEV+VA+QEL+Q+H+DVKLFNRW+FDD+ VND+SLVDYIGVAP+KHATYVPHTAGR
Sbjct: 27  GIMAVEVDVASQELTQSHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGR 86

Query: 85  YSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDA 144
           YSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAM+IIHLLTDLNPIQVIVDA
Sbjct: 87  YSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDA 146

Query: 145 VVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLAD 204
           VVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLAD
Sbjct: 147 VVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLAD 206

Query: 205 ELINAAKGSSNSYAIKKKDEVERVAKANR 233
           ELINAAKGSSNSYAIKKKDE+ERVAKANR
Sbjct: 207 ELINAAKGSSNSYAIKKKDEIERVAKANR 235

[Close]
BLAST of Cp4.1LG15g03390 vs. TAIR 10
Match: AT2G37270.1 (ribosomal protein 5B )

HSP 1 Score: 359.4 bits (921), Expect = 2.2e-99
Identity = 181/207 (87.44%), Postives = 194/207 (93.72%), Query Frame = 0 

Query: 27  MAVEVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYS 86
           MA   E+  +   Q  N+VKLFNRWSFDD+ V D+SLVDYIGV PSKHAT+VPHTAGRYS
Sbjct: 1   MAASAEIDAEIQQQLTNEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 60

Query: 87  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVV 146
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAM+IIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 147 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 206
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 180

Query: 207 INAAKGSSNSYAIKKKDEVERVAKANR 234
           INAAKGSSNSYAIKKKDE+ERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Cp4.1LG15g03390 vs. TAIR 10
Match: AT2G37270.2 (ribosomal protein 5B )

HSP 1 Score: 359.4 bits (921), Expect = 2.2e-99
Identity = 181/207 (87.44%), Postives = 194/207 (93.72%), Query Frame = 0 

Query: 27  MAVEVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYS 86
           MA   E+  +   Q  N+VKLFNRWSFDD+ V D+SLVDYIGV PSKHAT+VPHTAGRYS
Sbjct: 1   MAASAEIDAEIQQQLTNEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 60

Query: 87  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVV 146
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAM+IIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 147 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 206
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 180

Query: 207 INAAKGSSNSYAIKKKDEVERVAKANR 234
           INAAKGSSNSYAIKKKDE+ERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Cp4.1LG15g03390 vs. TAIR 10
Match: AT3G11940.1 (ribosomal protein 5A )

HSP 1 Score: 348.2 bits (892), Expect = 5.1e-96
Identity = 175/207 (84.54%), Postives = 192/207 (92.75%), Query Frame = 0 

Query: 27  MAVEVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYS 86
           MA   +V  +      N+VKLFNRW++DD+ V D+SLVDYIGV  +KHAT+VPHTAGRYS
Sbjct: 1   MATAADVDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 60

Query: 87  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVV 146
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAM+IIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 147 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 206
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 180

Query: 207 INAAKGSSNSYAIKKKDEVERVAKANR 234
           INAAKGSSNSYAIKKKDE+ERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Cp4.1LG15g03390 vs. TAIR 10
Match: AT3G11940.2 (ribosomal protein 5A )

HSP 1 Score: 348.2 bits (892), Expect = 5.1e-96
Identity = 175/207 (84.54%), Postives = 192/207 (92.75%), Query Frame = 0 

Query: 27  MAVEVEVANQELSQTHNDVKLFNRWSFDDIHVNDMSLVDYIGVAPSKHATYVPHTAGRYS 86
           MA   +V  +      N+VKLFNRW++DD+ V D+SLVDYIGV  +KHAT+VPHTAGRYS
Sbjct: 1   MATAADVDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 60

Query: 87  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVV 146
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAM+IIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 147 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 206
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 180

Query: 207 INAAKGSSNSYAIKKKDEVERVAKANR 234
           INAAKGSSNSYAIKKKDE+ERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Cp4.1LG15g03390 vs. TAIR 10
Match: ATCG01240.1 (ribosomal protein S7 )

HSP 1 Score: 55.5 bits (132), Expect = 6.8e-08
Identity = 48/136 (35.29%), Postives = 73/136 (53.68%), Query Frame = 0 

Query: 100 RLTNSLMMHGRNNGKKLMAVRIIKHAMDIIHLLTDLNPIQVIVDAVVNSGP--REDATRI 159
           RL N L+     +GKK +A +II  A+  I   T+ NP+ V+  A+    P     A R+
Sbjct: 21  RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80

Query: 160 GSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSY 219
           G  G   +  ++I   +    AI  L   +R+   RN   +A  L+ EL++AAKGS +  
Sbjct: 81  G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 140

Query: 220 AIKKKDEVERVAKANR 234
           AI+KK+E  R+A+ANR
Sbjct: 141 AIRKKEETHRMAEANR 149

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g03390 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9ZUT93.1e-9887.4440S ribosomal protein S5-1 OS=Arabidopsis thaliana OX=3702 GN=RPS5A PE=1 SV=1[more]
O657311.3e-9692.7540S ribosomal protein S5 (Fragment) OS=Cicer arietinum OX=3827 GN=RPS5 PE=2 SV=1[more]
P514277.2e-9584.5440S ribosomal protein S5-2 OS=Arabidopsis thaliana OX=3702 GN=RPS5B PE=1 SV=2[more]
Q5E9882.4e-8275.9840S ribosomal protein S5 OS=Bos taurus OX=9913 GN=RPS5 PE=2 SV=3[more]
P467822.4e-8275.9840S ribosomal protein S5 OS=Homo sapiens OX=9606 GN=RPS5 PE=1 SV=4[more]
BLAST of Cp4.1LG15g03390 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6571821.11.37e-15495.8240S ribosomal protein S5-1, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023554676.13.13e-140100.0040S ribosomal protein S5-like [Cucurbita pepo subsp. pepo][more]
XP_022971999.16.05e-13898.0740S ribosomal protein S5-like [Cucurbita maxima][more]
XP_038888890.15.52e-13593.8140S ribosomal protein S5-like isoform X1 [Benincasa hispida][more]
XP_022932519.19.60e-13595.6540S ribosomal protein S5 [Cucurbita moschata] >KAG6588507.1 40S ribosomal protei... [more]
BLAST of Cp4.1LG15g03390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IA672.93e-13898.0740S ribosomal protein S5-like OS=Cucurbita maxima OX=3661 GN=LOC111470649 PE=3 S... [more]
A0A6J1EX774.65e-13595.6540S ribosomal protein S5 OS=Cucurbita moschata OX=3662 GN=LOC111439005 PE=3 SV=1[more]
A0A6J1I1L99.37e-13595.6540S ribosomal protein S5 OS=Cucurbita maxima OX=3661 GN=LOC111469027 PE=3 SV=1[more]
A0A1S3C3S71.19e-13494.2640S ribosomal protein S5-like OS=Cucumis melo OX=3656 GN=LOC103496679 PE=3 SV=1[more]
A0A5D3E4H03.61e-13493.7840S ribosomal protein S5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
BLAST of Cp4.1LG15g03390 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G37270.12.2e-9987.44ribosomal protein 5B [more]
AT2G37270.22.2e-9987.44ribosomal protein 5B [more]
AT3G11940.15.1e-9684.54ribosomal protein 5A [more]
AT3G11940.25.1e-9684.54ribosomal protein 5A [more]
ATCG01240.16.8e-0835.29ribosomal protein S7 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000235Ribosomal protein S5/S7PIRSFPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 8..233
e-value: 1.5E-40
score: 137.2
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 27..233
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 87..233
e-value: 4.9E-37
score: 126.9
IPR005716Ribosomal protein S5/S7, eukaryotic/archaealTIGRFAMTIGR01028TIGR01028coord: 45..233
e-value: 9.1E-90
score: 297.3
IPR005716Ribosomal protein S5/S7, eukaryotic/archaealCDDcd14867uS7_Eukaryotecoord: 46..233
e-value: 2.34824E-138
score: 383.828
IPR036823Ribosomal protein S7 domain superfamilyGENE3D1.10.455.10Ribosomal protein S7 domaincoord: 26..233
e-value: 6.2E-96
score: 321.7
IPR036823Ribosomal protein S7 domain superfamilySUPERFAMILY47973Ribosomal protein S7coord: 46..233
NoneNo IPR availablePANTHERPTHR11205:SF3640S RIBOSOMAL PROTEIN S5coord: 27..233
IPR020606Ribosomal protein S7, conserved sitePROSITEPS00052RIBOSOMAL_S7coord: 99..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g03390.1Cp4.1LG15g03390.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000028 ribosomal small subunit assembly
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003729 mRNA binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding