Cp4.1LG15g02780 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g02780
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	COP9 signalosome complex subunit 8-like
Location	Cp4.1LG15: 2940337 .. 2941404 (+)
RNA-Seq Expression	Cp4.1LG15g02780
Synteny	Cp4.1LG15g02780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTGCTCGTCTCACTGAGGCTTTGGCTTTCAAATCTTACGAAAAGATCGCTGATATTTGCGACGACCTAATGCTCCAGGCAACTGAATTTCTCACTTTTTCATTTTCTTCACCTTTAATTTCTTCCCCCTCACCTGATTTTTCCTCTCCGGTTTCTTAAAATTTACATTACTTGATCAGGCTGCAGCCGAGGGCGTTGATTATCAGGATGAATGGCCTTACGTGATCCATTTTCTTGGCTACCTTTACGTCGATGACATGTAAGATCATTTTCCTTGATGTCTTAATTATTTCGTTTCAAATCATGAACAAAATTTTAGGTGGATTGATTATGGCACTGCACTGTTATGTCGGAATGTTTTGTGGTTCTTGTCTTTTGATCTGGATTTTAAGCGCCATTCTACTTTTTGGCTCATTTCAATGTGTTCGGTCATGTTTTCATTGATTACTGCCTCCCATGGAAGTCTTAATCAATGTGAGAGTTTAACATTGTGTTCAGTTTTCCTTGGGAGTGTTTCGGAAACGAAAGAACAATATGGTCAAAACTGTCCTGTTGATTTGTCTAAGAAATATAGTTAACTTGTTCTTAGGGCTCTATAGTGTTACTTTGGAGTTATTTGTTTCAAAAAACATTGGTCCATATGTAAATTATTTATAGATTTTATCTTAGATTCATTGTTCAGTCTTTGTTTTTGGATTTGTTTTGTTCCTTCATTTTCCCTTGTTTCTTCTTCCATTCAATTTTTGTTGTTGGATGTTCTAGTAATTTTGTAGTGTTCGTATCGAAACTCTTGGTTGAAATTGAGTTTCCTTATCTGGATTTGTGGATTATCAGCTGACTGTTAACTGTTTAGTGGTTTCTTGCAGCAATAGTGCTCGATTTTTCTGGAAATCAATACCTTCCACTATAAAAGAAAACCGACCAGAACTGGTTGCCGTTTGGAAAATTGCCCAAAAGCTATGGATTCAGGACCATAGGGGCGTGTATGAGGCTATTCATGGATTTGATTGGTGTCAAGAAGTTCAGGGCCTATTAGTTGCATTTTCAGGCAAGTTTCTTTAA

mRNA sequence

ATGGATTTTGCTCGTCTCACTGAGGCTTTGGCTTTCAAATCTTACGAAAAGATCGCTGATATTTGCGACGACCTAATGCTCCAGGCAACTGAATTTCTCACTTTTTCATTTTCTTCACCTTTAATTTCTTCCCCCTCACCTGATTTTTCCTCTCCGCTGACTGTTAACTGTTTAGTGGTTTCTTGCAGCAATAGTGCTCGATTTTTCTGGAAATCAATACCTTCCACTATAAAAGAAAACCGACCAGAACTGGTTGCCGTTTGGAAAATTGCCCAAAAGCTATGGATTCAGGACCATAGGGGCGTGTATGAGGCTATTCATGGATTTGATTGGTGTCAAGAAGTTCAGGGCCTATTAGTTGCATTTTCAGGCAAGTTTCTTTAA

Coding sequence (CDS)

ATGGATTTTGCTCGTCTCACTGAGGCTTTGGCTTTCAAATCTTACGAAAAGATCGCTGATATTTGCGACGACCTAATGCTCCAGGCAACTGAATTTCTCACTTTTTCATTTTCTTCACCTTTAATTTCTTCCCCCTCACCTGATTTTTCCTCTCCGCTGACTGTTAACTGTTTAGTGGTTTCTTGCAGCAATAGTGCTCGATTTTTCTGGAAATCAATACCTTCCACTATAAAAGAAAACCGACCAGAACTGGTTGCCGTTTGGAAAATTGCCCAAAAGCTATGGATTCAGGACCATAGGGGCGTGTATGAGGCTATTCATGGATTTGATTGGTGTCAAGAAGTTCAGGGCCTATTAGTTGCATTTTCAGGCAAGTTTCTTTAA

Protein sequence

MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPSPDFSSPLTVNCLVVSCSNSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSGKFL

Homology

[Close]

BLAST of Cp4.1LG15g02780 vs. ExPASy Swiss-Prot
Match: P43255 (COP9 signalosome complex subunit 8 OS=Arabidopsis thaliana OX=3702 GN=CSN8 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.7e-24
Identity = 61/124 (49.19%), Postives = 79/124 (63.71%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQ-ATEFLTFSFSSPLISSPSPDFSSPLTVNCLV 60
           MD + + EALA KS++KIADICD LMLQ A+E + +    P        ++  L     V
Sbjct: 1   MDLSPVKEALAAKSFDKIADICDTLMLQVASEGIEYHDDWP--------YAIHLLGYFYV 60

Query: 61  VSCSNSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLL 120
             C +SARF WK IP+ IKE +PE+VA W I QKLW  D+ GVYEAI G+DW QE + ++
Sbjct: 61  DDC-DSARFLWKRIPTAIKERKPEVVAAWGIGQKLWTHDYAGVYEAIRGYDWSQEAKDMV 115

Query: 121 VAFS 124
            AFS
Sbjct: 121 AAFS 115

[Close]

BLAST of Cp4.1LG15g02780 vs. ExPASy Swiss-Prot
Match: Q7ZUZ0 (COP9 signalosome complex subunit 8 OS=Danio rerio OX=7955 GN=cops8 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.8e-11
Identity = 32/101 (31.68%), Postives = 54/101 (53.47%), Query Frame = 0


Query: 25  LMLQATEFLTFSFSSPLISSP----SPDFSSPLTVNCLVVSCSNSARFFWKSIPSTIKEN 84
           +M +  E L   F +  + +P    +P   S L V  L+ +  N+AR+ WK IP  IK  
Sbjct: 6   MMAELDEKLLLQFETQELEAPGGIATPQVYSQLLVLYLLHNDMNNARYLWKRIPQAIKTA 65

Query: 85  RPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVA 122
            PE+ A+W + Q++W +D  G+Y AI  + W + +  ++ A
Sbjct: 66  NPEMAAIWAVGQRIWQRDFPGIYSAIAAYQWSESILPVMEA 106

[Close]

BLAST of Cp4.1LG15g02780 vs. ExPASy Swiss-Prot
Match: Q6GQA6 (COP9 signalosome complex subunit 8 OS=Xenopus laevis OX=8355 GN=csn8 PE=2 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 7.8e-11
Identity = 32/108 (29.63%), Postives = 58/108 (53.70%), Query Frame = 0


Query: 14  SYEKIADICDDLMLQATEFLTFSFSSPLISSPSPDFSSPLTVNCLVVSCSNSARFFWKSI 73
           S++K+ + C++  L+A   +            SP   + L    L+ +  N+AR+ WK I
Sbjct: 14  SFQKLQEQCEEQELEAPGGIA-----------SPQVYNQLLALYLLHNDLNNARYLWKRI 73

Query: 74  PSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVA 122
           PS IK +  EL  +W++ QK+W +D  G+Y +I  + W + +Q ++ A
Sbjct: 74  PSAIKSSHSELGGIWEVGQKIWQRDFPGIYTSISAYQWSENIQQIMEA 110

[Close]

BLAST of Cp4.1LG15g02780 vs. ExPASy Swiss-Prot
Match: Q8VBV7 (COP9 signalosome complex subunit 8 OS=Mus musculus OX=10090 GN=Cops8 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.3e-09
Identity = 31/108 (28.70%), Postives = 52/108 (48.15%), Query Frame = 0


Query: 14  SYEKIADICDDLMLQATEFLTFSFSSPLISSPSPDFSSPLTVNCLVVSCSNSARFFWKSI 73
           S+ K+ D C++  L+A   +            +P     L    L+ +  N+AR+ WK I
Sbjct: 12  SFRKLLDQCENQELEAPGGIA-----------TPPVYGQLLALYLLQNDMNNARYLWKRI 71

Query: 74  PSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVA 122
           P  IK    EL  +W + Q++W +D  G+Y  I+   W + VQ ++ A
Sbjct: 72  PPAIKSANSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEA 108

[Close]

BLAST of Cp4.1LG15g02780 vs. ExPASy Swiss-Prot
Match: Q6P4Z9 (COP9 signalosome complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Cops8 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.3e-09
Identity = 31/108 (28.70%), Postives = 52/108 (48.15%), Query Frame = 0


Query: 14  SYEKIADICDDLMLQATEFLTFSFSSPLISSPSPDFSSPLTVNCLVVSCSNSARFFWKSI 73
           S+ K+ D C++  L+A   +            +P     L    L+ +  N+AR+ WK I
Sbjct: 12  SFRKLLDQCENQELEAPGGIA-----------TPPVYGQLLALYLLQNDMNNARYLWKRI 71

Query: 74  PSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVA 122
           P  IK    EL  +W + Q++W +D  G+Y  I+   W + VQ ++ A
Sbjct: 72  PPAIKSANSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEA 108

[Close]

BLAST of Cp4.1LG15g02780 vs. NCBI nr
Match: XP_023553641.1 (COP9 signalosome complex subunit 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176 bits (445), Expect = 3.74e-53
Identity = 93/124 (75.00%), Postives = 97/124 (78.23%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAT-EFLTFSFSSPLISSPSPDFSSPLTVNCLV 60
           MDFARLTEALAFKSYEKIADICDDLMLQA  E + +    P +            +  L 
Sbjct: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIH---------FLGYLY 60

Query: 61  VSCSNSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLL 120
           V   NSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLL
Sbjct: 61  VDDINSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLL 115

Query: 121 VAFS 123
           VAFS
Sbjct: 121 VAFS 115

[Close]

BLAST of Cp4.1LG15g02780 vs. NCBI nr
Match: XP_022963990.1 (COP9 signalosome complex subunit 8-like [Cucurbita moschata])

HSP 1 Score: 175 bits (443), Expect = 7.53e-53
Identity = 92/124 (74.19%), Postives = 97/124 (78.23%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAT-EFLTFSFSSPLISSPSPDFSSPLTVNCLV 60
           MDFARLTEALAFKSYEKIADICDDLMLQA  E + +    P +            +  L 
Sbjct: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIH---------FLGYLY 60

Query: 61  VSCSNSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLL 120
           V   NSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQG+L
Sbjct: 61  VDDINSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGIL 115

Query: 121 VAFS 123
           VAFS
Sbjct: 121 VAFS 115

[Close]

BLAST of Cp4.1LG15g02780 vs. NCBI nr
Match: KAG6571729.1 (COP9 signalosome complex subunit 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 172 bits (437), Expect = 6.14e-52
Identity = 91/124 (73.39%), Postives = 97/124 (78.23%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAT-EFLTFSFSSPLISSPSPDFSSPLTVNCLV 60
           MDFARLTEALAFKSYEKIADICDDLMLQA  E + +    P +            +  L 
Sbjct: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIH---------FLGYLY 60

Query: 61  VSCSNSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLL 120
           V   NSARFFWKSIPST+KE+RPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLL
Sbjct: 61  VDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLL 115

Query: 121 VAFS 123
           VAFS
Sbjct: 121 VAFS 115

[Close]

BLAST of Cp4.1LG15g02780 vs. NCBI nr
Match: XP_022967528.1 (COP9 signalosome complex subunit 8-like [Cucurbita maxima])

HSP 1 Score: 169 bits (429), Expect = 1.01e-50
Identity = 89/124 (71.77%), Postives = 96/124 (77.42%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAT-EFLTFSFSSPLISSPSPDFSSPLTVNCLV 60
           MDFARLTEALAFKSYEKIADICD+LMLQA  E + +    P +            +  L 
Sbjct: 1   MDFARLTEALAFKSYEKIADICDELMLQAAAEGVDYQDEWPYVIH---------FLGHLY 60

Query: 61  VSCSNSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLL 120
           V   NSARF WKSIPSTIKENRPELVAVWKIAQ+LWIQDHRGVYEAIHGFDWCQEVQG+L
Sbjct: 61  VDDINSARFLWKSIPSTIKENRPELVAVWKIAQRLWIQDHRGVYEAIHGFDWCQEVQGIL 115

Query: 121 VAFS 123
           VAFS
Sbjct: 121 VAFS 115

[Close]

BLAST of Cp4.1LG15g02780 vs. NCBI nr
Match: XP_031743776.1 (COP9 signalosome complex subunit 8 isoform X2 [Cucumis sativus])

HSP 1 Score: 154 bits (390), Expect = 2.54e-45
Identity = 81/124 (65.32%), Postives = 88/124 (70.97%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAT-EFLTFSFSSPLISSPSPDFSSPLTVNCLV 60
           MDF RLTEALA KSY+KIADICDDLMLQA  E + +    P              +    
Sbjct: 1   MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIH---------FLGYFY 60

Query: 61  VSCSNSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLL 120
           V   NSARF WKSIPSTIKENRPELVA+WKI QKLW++DHRGVYEAIH  DWCQEVQGLL
Sbjct: 61  VDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHELDWCQEVQGLL 115

Query: 121 VAFS 123
            AFS
Sbjct: 121 AAFS 115

[Close]

BLAST of Cp4.1LG15g02780 vs. ExPASy TrEMBL
Match: A0A6J1HJJ3 (COP9 signalosome complex subunit 8-like OS=Cucurbita moschata OX=3662 GN=LOC111464125 PE=4 SV=1)

HSP 1 Score: 175 bits (443), Expect = 3.65e-53
Identity = 92/124 (74.19%), Postives = 97/124 (78.23%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAT-EFLTFSFSSPLISSPSPDFSSPLTVNCLV 60
           MDFARLTEALAFKSYEKIADICDDLMLQA  E + +    P +            +  L 
Sbjct: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIH---------FLGYLY 60

Query: 61  VSCSNSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLL 120
           V   NSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQG+L
Sbjct: 61  VDDINSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGIL 115

Query: 121 VAFS 123
           VAFS
Sbjct: 121 VAFS 115

[Close]

BLAST of Cp4.1LG15g02780 vs. ExPASy TrEMBL
Match: A0A6J1HVB2 (COP9 signalosome complex subunit 8-like OS=Cucurbita maxima OX=3661 GN=LOC111467007 PE=4 SV=1)

HSP 1 Score: 169 bits (429), Expect = 4.87e-51
Identity = 89/124 (71.77%), Postives = 96/124 (77.42%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAT-EFLTFSFSSPLISSPSPDFSSPLTVNCLV 60
           MDFARLTEALAFKSYEKIADICD+LMLQA  E + +    P +            +  L 
Sbjct: 1   MDFARLTEALAFKSYEKIADICDELMLQAAAEGVDYQDEWPYVIH---------FLGHLY 60

Query: 61  VSCSNSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLL 120
           V   NSARF WKSIPSTIKENRPELVAVWKIAQ+LWIQDHRGVYEAIHGFDWCQEVQG+L
Sbjct: 61  VDDINSARFLWKSIPSTIKENRPELVAVWKIAQRLWIQDHRGVYEAIHGFDWCQEVQGIL 115

Query: 121 VAFS 123
           VAFS
Sbjct: 121 VAFS 115

[Close]

BLAST of Cp4.1LG15g02780 vs. ExPASy TrEMBL
Match: A0A0A0KJG9 (CSN8_PSD8_EIF3K domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G411200 PE=4 SV=1)

HSP 1 Score: 159 bits (403), Expect = 3.85e-48
Identity = 84/128 (65.62%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAT-EFLTFSFSSPLISSPSPDFSSPLTVNCLV 60
           MDF RLTEALA KSY+KIADICDDLMLQA  E + +    P              +    
Sbjct: 1   MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIH---------FLGYFY 60

Query: 61  VSCSNSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLL 120
           V   NSARF WKSIPSTIKENRPELVA+WKI QKLW++DHRGVYEAIH  DWCQEVQGLL
Sbjct: 61  VDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHELDWCQEVQGLL 119

Query: 121 VAFSGKFL 127
            AFSGK L
Sbjct: 121 AAFSGKSL 119

[Close]

BLAST of Cp4.1LG15g02780 vs. ExPASy TrEMBL
Match: A0A1S3BMY1 (COP9 signalosome complex subunit 8 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491316 PE=4 SV=1)

HSP 1 Score: 152 bits (384), Expect = 1.00e-44
Identity = 81/124 (65.32%), Postives = 87/124 (70.16%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAT-EFLTFSFSSPLISSPSPDFSSPLTVNCLV 60
           MDF RLTEALA KSY+KIADICDDLMLQA  E + +    P              +    
Sbjct: 1   MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIH---------FLGYFY 60

Query: 61  VSCSNSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLL 120
           V   NSARF WK+IPSTIKENRPELVAVWKI QKLW +DHRGVYEAIH  DWCQEVQGLL
Sbjct: 61  VDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWTRDHRGVYEAIHELDWCQEVQGLL 115

Query: 121 VAFS 123
            AFS
Sbjct: 121 AAFS 115

[Close]

BLAST of Cp4.1LG15g02780 vs. ExPASy TrEMBL
Match: A0A1S3BMN0 (COP9 signalosome complex subunit 8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491316 PE=4 SV=1)

HSP 1 Score: 152 bits (384), Expect = 3.25e-44
Identity = 81/124 (65.32%), Postives = 87/124 (70.16%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAT-EFLTFSFSSPLISSPSPDFSSPLTVNCLV 60
           MDF RLTEALA KSY+KIADICDDLMLQA  E + +    P              +    
Sbjct: 1   MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIH---------FLGYFY 60

Query: 61  VSCSNSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLL 120
           V   NSARF WK+IPSTIKENRPELVAVWKI QKLW +DHRGVYEAIH  DWCQEVQGLL
Sbjct: 61  VDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWTRDHRGVYEAIHELDWCQEVQGLL 115

Query: 121 VAFS 123
            AFS
Sbjct: 121 AAFS 115

[Close]

BLAST of Cp4.1LG15g02780 vs. TAIR 10
Match: AT4G14110.1 (COP9 signalosome, subunit CSN8 )

HSP 1 Score: 112.1 bits (279), Expect = 3.4e-25
Identity = 61/124 (49.19%), Postives = 79/124 (63.71%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQ-ATEFLTFSFSSPLISSPSPDFSSPLTVNCLV 60
           MD + + EALA KS++KIADICD LMLQ A+E + +    P        ++  L     V
Sbjct: 1   MDLSPVKEALAAKSFDKIADICDTLMLQVASEGIEYHDDWP--------YAIHLLGYFYV 60

Query: 61  VSCSNSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLL 120
             C +SARF WK IP+ IKE +PE+VA W I QKLW  D+ GVYEAI G+DW QE + ++
Sbjct: 61  DDC-DSARFLWKRIPTAIKERKPEVVAAWGIGQKLWTHDYAGVYEAIRGYDWSQEAKDMV 115

Query: 121 VAFS 124
            AFS
Sbjct: 121 AAFS 115

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g02780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P43255	4.7e-24	49.19	COP9 signalosome complex subunit 8 OS=Arabidopsis thaliana OX=3702 GN=CSN8 PE=1 ...	[more]
Q7ZUZ0	7.8e-11	31.68	COP9 signalosome complex subunit 8 OS=Danio rerio OX=7955 GN=cops8 PE=2 SV=1	[more]
Q6GQA6	7.8e-11	29.63	COP9 signalosome complex subunit 8 OS=Xenopus laevis OX=8355 GN=csn8 PE=2 SV=2	[more]
Q8VBV7	7.3e-09	28.70	COP9 signalosome complex subunit 8 OS=Mus musculus OX=10090 GN=Cops8 PE=1 SV=1	[more]
Q6P4Z9	7.3e-09	28.70	COP9 signalosome complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Cops8 PE=2 S...	[more]

BLAST of Cp4.1LG15g02780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553641.1	3.74e-53	75.00	COP9 signalosome complex subunit 8-like [Cucurbita pepo subsp. pepo]	[more]
XP_022963990.1	7.53e-53	74.19	COP9 signalosome complex subunit 8-like [Cucurbita moschata]	[more]
KAG6571729.1	6.14e-52	73.39	COP9 signalosome complex subunit 8, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022967528.1	1.01e-50	71.77	COP9 signalosome complex subunit 8-like [Cucurbita maxima]	[more]
XP_031743776.1	2.54e-45	65.32	COP9 signalosome complex subunit 8 isoform X2 [Cucumis sativus]	[more]

BLAST of Cp4.1LG15g02780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJJ3	3.65e-53	74.19	COP9 signalosome complex subunit 8-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1HVB2	4.87e-51	71.77	COP9 signalosome complex subunit 8-like OS=Cucurbita maxima OX=3661 GN=LOC111467...	[more]
A0A0A0KJG9	3.85e-48	65.63	CSN8_PSD8_EIF3K domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G41...	[more]
A0A1S3BMY1	1.00e-44	65.32	COP9 signalosome complex subunit 8 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A1S3BMN0	3.25e-44	65.32	COP9 signalosome complex subunit 8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of Cp4.1LG15g02780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14110.1	3.4e-25	49.19	COP9 signalosome, subunit CSN8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033464	CSN8/PSMD8/EIF3K	PFAM	PF10075	CSN8_PSD8_EIF3K	coord: 57..116 e-value: 1.5E-6 score: 28.3
None	No IPR available	PANTHER	PTHR13339:SF1	BNAA08G07630D PROTEIN	coord: 1..124
IPR033205	COP9 signalosome, subunit CSN8	PANTHER	PTHR13339	COP9 SIGNALOSOME COMPLEX SUBUNIT 8	coord: 1..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g02780.1	Cp4.1LG15g02780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010387	COP9 signalosome assembly
biological_process	GO:0000338	protein deneddylation
cellular_component	GO:0008180	COP9 signalosome