Cp4.1LG15g02500 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g02500
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	NAC domain-containing protein
Location	Cp4.1LG15: 2353784 .. 2355397 (-)
RNA-Seq Expression	Cp4.1LG15g02500
Synteny	Cp4.1LG15g02500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTCTTCTCTTCTTCTTCCAAATTAACCTCCATGGCGGCAGCCGATCATTCCCACAACTTCAACCTCCCGCCGGGCTTCCGATTCCATCCGACCGACGAAGAACTCGTCGTCCATTTCCTCCACCGTAAGGCGGCCTTGCTCCCGTGCCACCCCGACGTCATTCCCGATCTCGATCTCTTCCCCTACGATCCGTGGGAGCTCGAAGGTAAGACCAAGTTGTTGGTGAATTGGTTTGTTTATTGGTTGCTGATTGTATGTGTTTTAGGGAAGGCGTTGGGAGAGGGAAACCGGTGGTATTTTTATAGTAGAAAGATTGATGCTCGAGTTACTGATAATGGCTATTGGAATCCATTGGGGAGAGATGATCCTGTCCTCTCTACTGCCACCTCCCAAGTTGTTGGAATGAAGAAGTATTTTCTTTTTCACGCCGCCGCCACCGCCACCGCCTCCGCCGCCGCCGATCCAATCAAAACTAATTGGATAATGCACGAGTATCGTCTTCCCGATGCTGCCTCTTCCTCTTCCTCTTCCTCGTCCTCCTCTACTAGATCGTCCAGACGCCGAGGACGGCCGAAAAGAGTACGCCACCATCCATCCCCCTTCAACCCAAGTTTTAATTTTTTTTTTCTAATATTTAATTCAACCCAACCCGTTATTTTTTTATTTTTTTTTAATAATATCAAACTACCCTTATATGGGTCCCATATCTATTGGACACTGGGTCTCGAACGGGTGAAATTTTGTGATCCCAGATCAATTGGGGAGGAGAACGAAATACCCTTCTTTAAGATCCCACGTCTCAAATAAGAAGTCCAAACATGACAATATTTGCTAACGGTTTTAAAATAATGTTTATTTCAGTAATTAAACTTATTAGCACTCTATCTTTTTTAATCGGTTTGGATTGAGTTGAATTTTGGAAGAAAAAAATATATAGTTTGGCCAATCAAAAAATAAGATTAAGAATATATAAATATTTTTTATTTAAATTTTTTTAAATTTTAGTTATTAATATAATAAATATGTTTTTTATTTTAAATAATAATAATAAAAAAAACCAGCAACGGTTGTAAACTTATTAAGGTTGTTCAATCACGAACTGAATCAAACTTCAGATTGGTCTACAAAGATTGTCCTAACCCAATTCAACCCAACTCGGGAATTAATAATTTAAAATAATTTAAAATTTTAATTTTGTTAATTATTTAATTAATTATATTTTTTTAATTAGCAGGATTACAGCAAATGGGTGTTGTGCAGAGTTTACGAAAGAGATGAAGAGAAGGAAGAAGAGGAAGAAGAAGATGGGGCTGAGCTGTCGTGTTTGGATGAAGTTTTTTTATCCTTAGAGGATCTCGACGAAATCAGCTTACCCACTCGCATCCAATAATGCGTCCCAAACACGCGCTTCCCACGTGCTCTCTTCTACTTATTATTATTACATCCCACTACCCCCATCTCTCCCTAAATTACCAACCAACCCCTCCTCTTTTATTTTTTCCCACTTCCCCCCCCCCTTTATGTCACTTTTATTAATTACTCCTAAAAAGAAATATCCTTTTCCAAAATTCTTTTTTAATTATTAGATTTTCCTTTTTTCCTTTTTTAATTA

mRNA sequence

TCTTCTTCTCTTCTTCTTCCAAATTAACCTCCATGGCGGCAGCCGATCATTCCCACAACTTCAACCTCCCGCCGGGCTTCCGATTCCATCCGACCGACGAAGAACTCGTCGTCCATTTCCTCCACCGTAAGGCGGCCTTGCTCCCGTGCCACCCCGACGTCATTCCCGATCTCGATCTCTTCCCCTACGATCCGTGGGAGCTCGAAGGGAAGGCGTTGGGAGAGGGAAACCGGTGGTATTTTTATAGTAGAAAGATTGATGCTCGAGTTACTGATAATGGCTATTGGAATCCATTGGGGAGAGATGATCCTGTCCTCTCTACTGCCACCTCCCAAGTTGTTGGAATGAAGAAGTATTTTCTTTTTCACGCCGCCGCCACCGCCACCGCCTCCGCCGCCGCCGATCCAATCAAAACTAATTGGATAATGCACGAGTATCGTCTTCCCGATGCTGCCTCTTCCTCTTCCTCTTCCTCGTCCTCCTCTACTAGATCGTCCAGACGCCGAGGACGGCCGAAAAGAGATTACAGCAAATGGGTGTTGTGCAGAGTTTACGAAAGAGATGAAGAGAAGGAAGAAGAGGAAGAAGAAGATGGGGCTGAGCTGTCGTGTTTGGATGAAGTTTTTTTATCCTTAGAGGATCTCGACGAAATCAGCTTACCCACTCGCATCCAATAATGCGTCCCAAACACGCGCTTCCCACGTGCTCTCTTCTACTTATTATTATTACATCCCACTACCCCCATCTCTCCCTAAATTACCAACCAACCCCTCCTCTTTTATTTTTTCCCACTTCCCCCCCCCCTTTATGTCACTTTTATTAATTACTCCTAAAAAGAAATATCCTTTTCCAAAATTCTTTTTTAATTATTAGATTTTCCTTTTTTCCTTTTTTAATTA

Coding sequence (CDS)

ATGGCGGCAGCCGATCATTCCCACAACTTCAACCTCCCGCCGGGCTTCCGATTCCATCCGACCGACGAAGAACTCGTCGTCCATTTCCTCCACCGTAAGGCGGCCTTGCTCCCGTGCCACCCCGACGTCATTCCCGATCTCGATCTCTTCCCCTACGATCCGTGGGAGCTCGAAGGGAAGGCGTTGGGAGAGGGAAACCGGTGGTATTTTTATAGTAGAAAGATTGATGCTCGAGTTACTGATAATGGCTATTGGAATCCATTGGGGAGAGATGATCCTGTCCTCTCTACTGCCACCTCCCAAGTTGTTGGAATGAAGAAGTATTTTCTTTTTCACGCCGCCGCCACCGCCACCGCCTCCGCCGCCGCCGATCCAATCAAAACTAATTGGATAATGCACGAGTATCGTCTTCCCGATGCTGCCTCTTCCTCTTCCTCTTCCTCGTCCTCCTCTACTAGATCGTCCAGACGCCGAGGACGGCCGAAAAGAGATTACAGCAAATGGGTGTTGTGCAGAGTTTACGAAAGAGATGAAGAGAAGGAAGAAGAGGAAGAAGAAGATGGGGCTGAGCTGTCGTGTTTGGATGAAGTTTTTTTATCCTTAGAGGATCTCGACGAAATCAGCTTACCCACTCGCATCCAATAA

Protein sequence

MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEEEEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ

Homology

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BLAST of Cp4.1LG15g02500 vs. ExPASy Swiss-Prot
Match: Q8GWK6 (NAC domain-containing protein 104 OS=Arabidopsis thaliana OX=3702 GN=NAC104 PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 6.2e-69
Identity = 128/200 (64.00%), Postives = 154/200 (77.00%), Query Frame = 0


Query: 11  NLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRWYF 70
           NLPPGFRF PTDEELVVHFLHRKA+LLPCHPDVIPDLDL+ YDPW+L GKALGEG +WYF
Sbjct: 2   NLPPGFRFFPTDEELVVHFLHRKASLLPCHPDVIPDLDLYHYDPWDLPGKALGEGRQWYF 61

Query: 71  YSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAAADPIKTNW 130
           YSRK   RVT NGYW  +G D+P+ +++T + VG+KKY  F+   +          +TNW
Sbjct: 62  YSRKTQERVTSNGYWGSMGMDEPIYTSSTHKKVGIKKYLTFYLGDS----------QTNW 121

Query: 131 IMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEEEEEEDGAE 190
           IM EY LPD++SSSS SS  S+R+S    +P  DYSKWV+CRVYE  +   EEE++DG E
Sbjct: 122 IMQEYSLPDSSSSSSRSSKRSSRASSSSHKP--DYSKWVICRVYE--QNCSEEEDDDGTE 181

Query: 191 LSCLDEVFLSLEDLDEISLP 211
           LSCLDEVFLSL+DLDE+SLP
Sbjct: 182 LSCLDEVFLSLDDLDEVSLP 187

[Close]

BLAST of Cp4.1LG15g02500 vs. ExPASy Swiss-Prot
Match: A0SPJ8 (NAC transcription factor NAM-1 OS=Hordeum vulgare subsp. vulgare OX=112509 GN=NAM-1 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 8.8e-31
Identity = 77/197 (39.09%), Postives = 108/197 (54.82%), Query Frame = 0


Query: 12  LPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRWYFY 71
           LPPGFRFHPTDEELVVH+L +KAA  P    +I ++DL+ +DPWEL  KA    + WYF+
Sbjct: 35  LPPGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWYFF 94

Query: 72  S---RKI-----DARVTDNGYWNPLGRDDPVLSTATS---QVVGMKKYFLFHAAATATAS 131
           S   RK        R   +GYW   G D P+L++AT    + VG+KK  +F+        
Sbjct: 95  SPRDRKYANGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPPRG- 154

Query: 132 AAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEK 191
                +KTNWIMHEYRL  A++ S+++S     +   R         WVLCR+Y++  + 
Sbjct: 155 -----LKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKA 214

Query: 192 EEEEEEDGAELSCLDEV 198
                ++   + C D V
Sbjct: 215 AAAVGDEQRSMECEDSV 225

[Close]

BLAST of Cp4.1LG15g02500 vs. ExPASy Swiss-Prot
Match: D2SMN4 (NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum OX=77009 GN=NAM-B1 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 8.8e-31
Identity = 77/197 (39.09%), Postives = 108/197 (54.82%), Query Frame = 0


Query: 12  LPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRWYFY 71
           LPPGFRFHPTDEELVVH+L +KAA  P    +I ++DL+ +DPWEL  KA    + WYF+
Sbjct: 35  LPPGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWYFF 94

Query: 72  S---RKI-----DARVTDNGYWNPLGRDDPVLSTATS---QVVGMKKYFLFHAAATATAS 131
           S   RK        R   +GYW   G D P+L++AT    + VG+KK  +F+        
Sbjct: 95  SPRDRKYPNGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPPRG- 154

Query: 132 AAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEK 191
                +KTNWIMHEYRL  A++ S+++S     +   R         WVLCR+Y++  + 
Sbjct: 155 -----LKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKA 214

Query: 192 EEEEEEDGAELSCLDEV 198
                ++   + C D V
Sbjct: 215 AAAVGDEQRSMECEDSV 225

[Close]

BLAST of Cp4.1LG15g02500 vs. ExPASy Swiss-Prot
Match: A0SPJ6 (NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum OX=4567 GN=NAM-B2 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.3e-30
Identity = 79/195 (40.51%), Postives = 109/195 (55.90%), Query Frame = 0


Query: 12  LPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRWYFY 71
           LPPGFRFHPTDEELVVH+L +KAA +P    +I ++DL+ +DPWEL  KA      WYF+
Sbjct: 28  LPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIITEVDLYKFDPWELPEKATFGEQEWYFF 87

Query: 72  S---RKI-----DARVTDNGYWNPLGRDDPVLSTATS-QVVGMKKYFLFHAAATATASAA 131
           S   RK        R   +GYW   G D P+L++    + VG+KK  +F+          
Sbjct: 88  SPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKKALVFYRGKPPKG--- 147

Query: 132 ADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEE 191
              +KTNWIMHEYRL DA+SS+++S         R    + D   WVLCR+Y++  +   
Sbjct: 148 ---LKTNWIMHEYRLTDASSSATTSRPPPVTGGSRSASLRLD--DWVLCRIYKKINKAAA 207

Query: 192 EEEEDGAELSCLDEV 198
            +++   E  C D V
Sbjct: 208 GDQQRSME--CEDSV 212

[Close]

BLAST of Cp4.1LG15g02500 vs. ExPASy Swiss-Prot
Match: Q52QH4 (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC068 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-29
Identity = 79/198 (39.90%), Postives = 107/198 (54.04%), Query Frame = 0


Query: 5   DHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGE 64
           D     NLPPGFRFHPTDEELVVH+L RK A  P    +I ++DL+  DPW+L  KAL  
Sbjct: 14  DAEAELNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFG 73

Query: 65  GNRWYFYS---RKI-----DARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAAT 124
              WYF++   RK        R    GYW   G D PV    +++ VG+KK  +F+    
Sbjct: 74  RKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFY---- 133

Query: 125 ATASAAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYER 184
             +  A   +KT+WIMHEYRL DA  +             ++G  K D  +WVLCR+Y +
Sbjct: 134 --SGKAPRGVKTDWIMHEYRLADADRAPGG----------KKGSQKLD--EWVLCRLYNK 193

Query: 185 DE--EKEEEEEEDGAELS 193
               EK + E++D A ++
Sbjct: 194 KNNWEKVKLEQQDVASVA 193

[Close]

BLAST of Cp4.1LG15g02500 vs. NCBI nr
Match: XP_023511443.1 (NAC domain-containing protein 104-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 434 bits (1116), Expect = 1.44e-153
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGK 60
           MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGK
Sbjct: 1   MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGK 60

Query: 61  ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATAS 120
           ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATAS
Sbjct: 61  ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATAS 120

Query: 121 AAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEK 180
           AAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEK
Sbjct: 121 AAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEK 180

Query: 181 EEEEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ 214
           EEEEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ
Sbjct: 181 EEEEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ 214

[Close]

BLAST of Cp4.1LG15g02500 vs. NCBI nr
Match: XP_023511442.1 (NAC domain-containing protein 104-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 429 bits (1104), Expect = 1.01e-151
Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGK 60
           MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGK
Sbjct: 1   MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGK 60

Query: 61  ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATAS 120
           ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATAS
Sbjct: 61  ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATAS 120

Query: 121 AAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKR-DYSKWVLCRVYERDEE 180
           AAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKR DYSKWVLCRVYERDEE
Sbjct: 121 AAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRQDYSKWVLCRVYERDEE 180

Query: 181 KEEEEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ 214
           KEEEEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ
Sbjct: 181 KEEEEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ 215

[Close]

BLAST of Cp4.1LG15g02500 vs. NCBI nr
Match: KAG6571701.1 (NAC domain-containing protein 104, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 405 bits (1041), Expect = 3.06e-142
Identity = 202/214 (94.39%), Postives = 205/214 (95.79%), Query Frame = 0


Query: 1   MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGK 60
           MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDL+PYDPWELEGK
Sbjct: 1   MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLYPYDPWELEGK 60

Query: 61  ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATAS 120
           ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHA A+A   
Sbjct: 61  ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHATASAP-- 120

Query: 121 AAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEK 180
              DPIKTNWIMHEYRLPDAASSSSSSS+SSTRSSRRRGRPKRDYSKWVLCRVYERDEEK
Sbjct: 121 ---DPIKTNWIMHEYRLPDAASSSSSSSTSSTRSSRRRGRPKRDYSKWVLCRVYERDEEK 180

Query: 181 EEEEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ 214
           EEEE  DGAELSCLDEVFLSLEDLDEISLPTRIQ
Sbjct: 181 EEEE--DGAELSCLDEVFLSLEDLDEISLPTRIQ 207

[Close]

BLAST of Cp4.1LG15g02500 vs. NCBI nr
Match: XP_022963618.1 (NAC domain-containing protein 104-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 402 bits (1033), Expect = 5.07e-141
Identity = 204/216 (94.44%), Postives = 205/216 (94.91%), Query Frame = 0


Query: 1   MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGK 60
           MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGK
Sbjct: 1   MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGK 60

Query: 61  ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATAS 120
           ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHA       
Sbjct: 61  ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHA------- 120

Query: 121 AAADPIKTNWIMHEYRLPDA--ASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDE 180
           AAADPIKTNWIMHEYRLPDA  +SSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDE
Sbjct: 121 AAADPIKTNWIMHEYRLPDAVSSSSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDE 180

Query: 181 EKEEEEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ 214
           EKEEEE  DGAELSCLDEVFLSLEDLDEISLPTRIQ
Sbjct: 181 EKEEEE--DGAELSCLDEVFLSLEDLDEISLPTRIQ 207

[Close]

BLAST of Cp4.1LG15g02500 vs. NCBI nr
Match: XP_022967625.1 (NAC domain-containing protein 104-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 401 bits (1030), Expect = 1.45e-140
Identity = 203/216 (93.98%), Postives = 205/216 (94.91%), Query Frame = 0


Query: 1   MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGK 60
           MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDL+PYDPWELEGK
Sbjct: 1   MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLYPYDPWELEGK 60

Query: 61  ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATAS 120
           ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHA       
Sbjct: 61  ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHA------- 120

Query: 121 AAADPIKTNWIMHEYRLPDAASSSSSSSSSS--TRSSRRRGRPKRDYSKWVLCRVYERDE 180
           AAADPIKTNWIMHEYRLPDAASSSSSSSSSS  TRSS+RRGRPKRDYSKWVLCRVYERDE
Sbjct: 121 AAADPIKTNWIMHEYRLPDAASSSSSSSSSSSSTRSSKRRGRPKRDYSKWVLCRVYERDE 180

Query: 181 EKEEEEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ 214
           EKEEEE  DGAELSCLDEVFLSLEDLDEISLPTRIQ
Sbjct: 181 EKEEEE--DGAELSCLDEVFLSLEDLDEISLPTRIQ 207

[Close]

BLAST of Cp4.1LG15g02500 vs. ExPASy TrEMBL
Match: A0A6J1HIE6 (NAC domain-containing protein 104-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463897 PE=4 SV=1)

HSP 1 Score: 402 bits (1033), Expect = 2.46e-141
Identity = 204/216 (94.44%), Postives = 205/216 (94.91%), Query Frame = 0


Query: 1   MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGK 60
           MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGK
Sbjct: 1   MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGK 60

Query: 61  ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATAS 120
           ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHA       
Sbjct: 61  ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHA------- 120

Query: 121 AAADPIKTNWIMHEYRLPDA--ASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDE 180
           AAADPIKTNWIMHEYRLPDA  +SSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDE
Sbjct: 121 AAADPIKTNWIMHEYRLPDAVSSSSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDE 180

Query: 181 EKEEEEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ 214
           EKEEEE  DGAELSCLDEVFLSLEDLDEISLPTRIQ
Sbjct: 181 EKEEEE--DGAELSCLDEVFLSLEDLDEISLPTRIQ 207

[Close]

BLAST of Cp4.1LG15g02500 vs. ExPASy TrEMBL
Match: A0A6J1HV08 (NAC domain-containing protein 104-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467069 PE=4 SV=1)

HSP 1 Score: 401 bits (1030), Expect = 7.04e-141
Identity = 203/216 (93.98%), Postives = 205/216 (94.91%), Query Frame = 0


Query: 1   MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGK 60
           MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDL+PYDPWELEGK
Sbjct: 1   MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLYPYDPWELEGK 60

Query: 61  ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATAS 120
           ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHA       
Sbjct: 61  ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHA------- 120

Query: 121 AAADPIKTNWIMHEYRLPDAASSSSSSSSSS--TRSSRRRGRPKRDYSKWVLCRVYERDE 180
           AAADPIKTNWIMHEYRLPDAASSSSSSSSSS  TRSS+RRGRPKRDYSKWVLCRVYERDE
Sbjct: 121 AAADPIKTNWIMHEYRLPDAASSSSSSSSSSSSTRSSKRRGRPKRDYSKWVLCRVYERDE 180

Query: 181 EKEEEEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ 214
           EKEEEE  DGAELSCLDEVFLSLEDLDEISLPTRIQ
Sbjct: 181 EKEEEE--DGAELSCLDEVFLSLEDLDEISLPTRIQ 207

[Close]

BLAST of Cp4.1LG15g02500 vs. ExPASy TrEMBL
Match: A0A6J1HFQ5 (NAC domain-containing protein 104-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463897 PE=4 SV=1)

HSP 1 Score: 397 bits (1021), Expect = 1.72e-139
Identity = 204/217 (94.01%), Postives = 205/217 (94.47%), Query Frame = 0


Query: 1   MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGK 60
           MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGK
Sbjct: 1   MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGK 60

Query: 61  ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATAS 120
           ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHA       
Sbjct: 61  ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHA------- 120

Query: 121 AAADPIKTNWIMHEYRLPDA--ASSSSSSSSSSTRSSRRRGRPKR-DYSKWVLCRVYERD 180
           AAADPIKTNWIMHEYRLPDA  +SSSSSSSSSSTRSSRRRGRPKR DYSKWVLCRVYERD
Sbjct: 121 AAADPIKTNWIMHEYRLPDAVSSSSSSSSSSSSTRSSRRRGRPKRQDYSKWVLCRVYERD 180

Query: 181 EEKEEEEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ 214
           EEKEEEE  DGAELSCLDEVFLSLEDLDEISLPTRIQ
Sbjct: 181 EEKEEEE--DGAELSCLDEVFLSLEDLDEISLPTRIQ 208

[Close]

BLAST of Cp4.1LG15g02500 vs. ExPASy TrEMBL
Match: A0A6J1HX92 (NAC domain-containing protein 104-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467069 PE=4 SV=1)

HSP 1 Score: 396 bits (1018), Expect = 4.93e-139
Identity = 203/217 (93.55%), Postives = 205/217 (94.47%), Query Frame = 0


Query: 1   MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGK 60
           MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDL+PYDPWELEGK
Sbjct: 1   MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLYPYDPWELEGK 60

Query: 61  ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATAS 120
           ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHA       
Sbjct: 61  ALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHA------- 120

Query: 121 AAADPIKTNWIMHEYRLPDAASSSSSSSSSS--TRSSRRRGRPKR-DYSKWVLCRVYERD 180
           AAADPIKTNWIMHEYRLPDAASSSSSSSSSS  TRSS+RRGRPKR DYSKWVLCRVYERD
Sbjct: 121 AAADPIKTNWIMHEYRLPDAASSSSSSSSSSSSTRSSKRRGRPKRQDYSKWVLCRVYERD 180

Query: 181 EEKEEEEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ 214
           EEKEEEE  DGAELSCLDEVFLSLEDLDEISLPTRIQ
Sbjct: 181 EEKEEEE--DGAELSCLDEVFLSLEDLDEISLPTRIQ 208

[Close]

BLAST of Cp4.1LG15g02500 vs. ExPASy TrEMBL
Match: A0A0A0K5V4 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G058030 PE=4 SV=1)

HSP 1 Score: 353 bits (906), Expect = 4.69e-122
Identity = 176/212 (83.02%), Postives = 190/212 (89.62%), Query Frame = 0


Query: 3   AADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKAL 62
           AA HSHNFNLPPGFRF+PTDEELVVHFLHRKAALLPCHPDVIPDL+LF YDPWEL+GKAL
Sbjct: 2   AAPHSHNFNLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLNLFTYDPWELDGKAL 61

Query: 63  GEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAA 122
           GEGNRWYFYSRKI+ RVTDNG+WNPLGRDDPVLSTATS+VVGMKKYFLFH        A 
Sbjct: 62  GEGNRWYFYSRKIEGRVTDNGFWNPLGRDDPVLSTATSEVVGMKKYFLFH-----LQDAD 121

Query: 123 ADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEE 182
           A P+KTNWIMHE+RL DAA++ ++SSSSS    RRRGRPKRDYSKWVLCRVYERDEEKEE
Sbjct: 122 AGPLKTNWIMHEFRLADAAAAVATSSSSS----RRRGRPKRDYSKWVLCRVYERDEEKEE 181

Query: 183 EEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ 214
           EE  DGAELSCLDEVFL+L+DLDEISLP RIQ
Sbjct: 182 EE--DGAELSCLDEVFLTLDDLDEISLPNRIQ 202

[Close]

BLAST of Cp4.1LG15g02500 vs. TAIR 10
Match: AT5G64530.1 (xylem NAC domain 1 )

HSP 1 Score: 261.9 bits (668), Expect = 4.4e-70
Identity = 128/200 (64.00%), Postives = 154/200 (77.00%), Query Frame = 0


Query: 11  NLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRWYF 70
           NLPPGFRF PTDEELVVHFLHRKA+LLPCHPDVIPDLDL+ YDPW+L GKALGEG +WYF
Sbjct: 2   NLPPGFRFFPTDEELVVHFLHRKASLLPCHPDVIPDLDLYHYDPWDLPGKALGEGRQWYF 61

Query: 71  YSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAAADPIKTNW 130
           YSRK   RVT NGYW  +G D+P+ +++T + VG+KKY  F+   +          +TNW
Sbjct: 62  YSRKTQERVTSNGYWGSMGMDEPIYTSSTHKKVGIKKYLTFYLGDS----------QTNW 121

Query: 131 IMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEEEEEEDGAE 190
           IM EY LPD++SSSS SS  S+R+S    +P  DYSKWV+CRVYE  +   EEE++DG E
Sbjct: 122 IMQEYSLPDSSSSSSRSSKRSSRASSSSHKP--DYSKWVICRVYE--QNCSEEEDDDGTE 181

Query: 191 LSCLDEVFLSLEDLDEISLP 211
           LSCLDEVFLSL+DLDE+SLP
Sbjct: 182 LSCLDEVFLSLDDLDEVSLP 187

[Close]

BLAST of Cp4.1LG15g02500 vs. TAIR 10
Match: AT1G52880.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 130.2 bits (326), Expect = 2.0e-30
Identity = 73/177 (41.24%), Postives = 97/177 (54.80%), Query Frame = 0


Query: 11  NLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRWYF 70
           NLPPGFRFHPTDEELV+H+L RKA  +P    +I D+DL+ +DPWEL  KA      WYF
Sbjct: 16  NLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYF 75

Query: 71  YS---RKI-----DARVTDNGYWNPLGRDDPVLST--ATSQVVGMKKYFLFHAAATATAS 130
           +S   RK        R   +GYW   G D PV+ST    S+ VG+KK  +F++       
Sbjct: 76  FSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKG- 135

Query: 131 AAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERD 178
                +K++WIMHEYRL D   +      +   S R           WVLCR+Y+++
Sbjct: 136 -----VKSDWIMHEYRLTDNKPTHICDFGNKKNSLR--------LDDWVLCRIYKKN 178

[Close]

BLAST of Cp4.1LG15g02500 vs. TAIR 10
Match: AT1G61110.1 (NAC domain containing protein 25 )

HSP 1 Score: 127.9 bits (320), Expect = 1.0e-29
Identity = 74/183 (40.44%), Postives = 100/183 (54.64%), Query Frame = 0


Query: 11  NLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRWYF 70
           +LPPGFRFHPTDEELVVH+L +KA  +P    +I ++DL+ +DPWEL  KA    + WYF
Sbjct: 15  HLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKASFGEHEWYF 74

Query: 71  YS---RKIDARVTDN-----GYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAA 130
           +S   RK    V  N     GYW   G D P+  T  S  VG+KK  +F+          
Sbjct: 75  FSPRDRKYPNGVRPNRAATSGYWKATGTDKPIF-TCNSHKVGVKKALVFYGGKPPKG--- 134

Query: 131 ADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEE 186
              IKT+WIMHEYRL D   S+++     T + +   R       WVLCR+Y+++  +  
Sbjct: 135 ---IKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLR----LDDWVLCRIYKKNSSQRP 186

[Close]

BLAST of Cp4.1LG15g02500 vs. TAIR 10
Match: AT1G01720.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-28
Identity = 74/178 (41.57%), Postives = 91/178 (51.12%), Query Frame = 0


Query: 7   SHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGN 66
           S    LPPGFRFHPTDEELV+H+L RK A       +I ++DL+ YDPWEL G AL    
Sbjct: 2   SELLQLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEK 61

Query: 67  RWYFYS---RKI-----DARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATAT 126
            WYF+S   RK        R   +GYW   G D P+      + VG+KK  +F+A     
Sbjct: 62  EWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPI---GLPKPVGIKKALVFYAGKAPK 121

Query: 127 ASAAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYER 177
                   KTNWIMHEYRL D             RS R++    R    WVLCR+Y +
Sbjct: 122 GE------KTNWIMHEYRLADV-----------DRSVRKKKNSLR-LDDWVLCRIYNK 158

[Close]

BLAST of Cp4.1LG15g02500 vs. TAIR 10
Match: AT3G15510.1 (NAC domain containing protein 2 )

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-28
Identity = 73/196 (37.24%), Postives = 107/196 (54.59%), Query Frame = 0


Query: 11  NLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRWYF 70
           NLPPGFRFHPTDEELVVH+L RKAA  P    +I ++DL+ +DPWEL  KA      WYF
Sbjct: 16  NLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYF 75

Query: 71  YS---RKI-----DARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAA 130
           +S   RK        R   +GYW   G D PVL++  +Q VG+KK  +F++         
Sbjct: 76  FSPRDRKYPNGARPNRAATSGYWKATGTDKPVLASDGNQKVGVKKALVFYSGKPPKG--- 135

Query: 131 ADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEE 190
              +K++WIMHEYRL     +  ++         ++   + D   WVLCR+Y+++     
Sbjct: 136 ---VKSDWIMHEYRL---IENKPNNRPPGCDFGNKKNSLRLD--DWVLCRIYKKNNASRH 195

Query: 191 EEEEDGAELSCLDEVF 199
            + +   ++  +D +F
Sbjct: 196 VDNDKDHDM--IDYIF 198

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g02500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWK6	6.2e-69	64.00	NAC domain-containing protein 104 OS=Arabidopsis thaliana OX=3702 GN=NAC104 PE=2...	[more]
A0SPJ8	8.8e-31	39.09	NAC transcription factor NAM-1 OS=Hordeum vulgare subsp. vulgare OX=112509 GN=NA...	[more]
D2SMN4	8.8e-31	39.09	NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum OX=77009 GN...	[more]
A0SPJ6	3.3e-30	40.51	NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum OX=4567 GN=NAM...	[more]
Q52QH4	1.3e-29	39.90	NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC...	[more]

BLAST of Cp4.1LG15g02500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023511443.1	1.44e-153	100.00	NAC domain-containing protein 104-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023511442.1	1.01e-151	99.53	NAC domain-containing protein 104-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6571701.1	3.06e-142	94.39	NAC domain-containing protein 104, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022963618.1	5.07e-141	94.44	NAC domain-containing protein 104-like isoform X2 [Cucurbita moschata]	[more]
XP_022967625.1	1.45e-140	93.98	NAC domain-containing protein 104-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG15g02500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HIE6	2.46e-141	94.44	NAC domain-containing protein 104-like isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1HV08	7.04e-141	93.98	NAC domain-containing protein 104-like isoform X2 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1HFQ5	1.72e-139	94.01	NAC domain-containing protein 104-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1HX92	4.93e-139	93.55	NAC domain-containing protein 104-like isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A0A0K5V4	4.69e-122	83.02	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G058030 PE=4 SV...	[more]

BLAST of Cp4.1LG15g02500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64530.1	4.4e-70	64.00	xylem NAC domain 1	[more]
AT1G52880.1	2.0e-30	41.24	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT1G61110.1	1.0e-29	40.44	NAC domain containing protein 25	[more]
AT1G01720.1	1.4e-28	41.57	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT3G15510.1	1.4e-28	37.24	NAC domain containing protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 21..181 e-value: 8.5E-35 score: 121.8
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 9..175
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 13..137 e-value: 4.6E-30 score: 105.2
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 12..176 score: 43.236496
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..154
None	No IPR available	PANTHER	PTHR31719:SF134	NAC DOMAIN-CONTAINING PROTEIN 104	coord: 10..208
None	No IPR available	PANTHER	PTHR31719	NAC TRANSCRIPTION FACTOR 56	coord: 10..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g02500.1	Cp4.1LG15g02500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043067	regulation of programmed cell death
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0048367	shoot system development
biological_process	GO:0010089	xylem development
molecular_function	GO:0003677	DNA binding