Cp4.1LG15g02020 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g02020
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	fibroin heavy chain-like isoform X21
Location	Cp4.1LG15: 1740091 .. 1742085 (+)
RNA-Seq Expression	Cp4.1LG15g02020
Synteny	Cp4.1LG15g02020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGTTTCATTCAGTTGTTGACTCGGTTCATTCATCTTCTTTACTCGGGTGTCGTACACGAACAAAACTCGGAATGTGAGTTGAAATGGAGGGAGTGGAGGACAGCTTAATGACACTGATTTTGTGAAATGGAGTGAAAGAGGGAGTGGGTAGGTGTAGATTTAGGGCCACCCACTTTCTCCCTTTTGCATGTGCCTCAACCACTCTCTCCACACAGCTTCCCTTATATAAACCCTTCACTCACTCCCTTTTCACTTCAACCATTCCCAAATGGCTTCTCATAAACGCCTTTCTTCTTTTCTCTTTTTTCTTTTATTAGGAATTGGGGTTTCTTCTGCAGCCAGAAATCTCTTAACTTATGGTGAAGGAAAGCCGGTGAACATTCCGGCATTTGCTTATGGTGCAGGCGGTGGTGCAGGTGGTGGTAGTGGTGGTGGATATGGTTCTCTTGGTGGTTATGGCGGTGGTGGAGGAAATGGAGGTGGTAGTGGCTATGGTTCTGTAGGAGAATATGGTGTTGGTGGCTATGGAAGTGGTGGCGGTGGAGGAAGTGGTGAGGGAGGTGGGTATGGCCCGGGAGGTGGAAATGGATATGGTGGAGGTGGAGGAAGTGGCGGTGGAGGTGGTTATGGTTCTGGGGTTAGATATGGTGAAGTTGGATATGGCTCTGGAGGTTCAGGGTATGGTGGAGGGAGTGGAGGCGGTGCTGGGTATGGTCCTGGAGGTGGAGGGTATGGAGGTGGCGGTGGAAATGGAGGTGGGGCTGGGTATGGTCCTGGAGGTTCTGGATATGGAGGAGGTGGTGGAAATGGGGGTGGTGCAGGGTATGGTCATGAGGGTGGTGGTTATGGTGGGGGTGGCGGAAATGGCGGAGGGGCAGGGTATGGTCATGAGGGTGGTGGATATGGAGGGGGCGGTGGAAATGGCGGTGGGGCAGGGTATGGTCATGAAGGTGGTGGTGGATATGGTGGGGGTGGCGGAAATGGCGGTGGGGCAGGGTATGGTCATGAAGGTGGTGGTGGATATGGAGGTGGAGGTGGAAATGGCGGTGGCGCAGGGTACGGTCATGACGGTGGTGGATACGGTGGGGGTGGTGGAAATGGTGGTGGCGCAGGGTATGGTCATGAAGGTAGTGGATACGGTGGGGGTGGCGGAAATGGCGGTGGGGCAGGGTATGGTTCTGGTGGTGCTGGGTCTGGCGCTGGAGGAGGAGAAGGGGGAGGTTCAGGGTATGGTGGAGAACATGGAGCAGGCTACGGTGGTGGTGGTGGAGGTGGAAATGGCGGCGGTGGAGGTGTAGGATATGGGCCAGGAGGAGAATATGGGTCAGGTTATGGAAGCGGAGCAGGTGGGGGTCATGGTGGAGGAGGAGGAAGTAGTGGTGGAGGAAGCGGTGGAGGTGGTGGAGGAGGGTCGGGATACGGTGGAGGAAGTGCACATGGAGGTGCATCTGGTGGTCATGAAGGAGGATATGGAGGAAGTAGTGGTGGAGGTGGTGGTCATGAGGGAGGATATGGTGGAGGAAGCGCACATGGAGGTGCATCTGGTGGTCATGAAGGAGGATATGGAGGAAGTAGTGGTGGAGGAAGCGGTGGAGGAGGTGGTGGTCATGACGGAGGATATGGTGGTGGAAGCGCACATGGAGGTGCATCTGGTGGTCATGAAGGAGGATATGGAGGAGGAGGTGGTAGCAGCCAAGGCGGTGACCACGGTGGATATGCACCTTGAGAAAGACCTCACCATTACCTTATATATTTAGTATTATTATAAAAAGGGCATATACATATGGTCATTCATCCTTTTTACCCCAAGTAATTAATAGAAAATATAAATCCATGATTGGGAAAAGGGAATAATTAATTATATAATATATCGTAAGAAAAGTGTGATGTTAAAATGGGAAACTCTTGTATCTTCACCTCTCCAAATTTTCTTCATATATAAAATTATTCTCTCTTATTTCCACAAAACCACACCAATTGCATGCATGCTCCCT

mRNA sequence

TCGTTTCATTCAGTTGTTGACTCGGTTCATTCATCTTCTTTACTCGGGTGTCGTACACGAACAAAACTCGGAATGTGAGTTGAAATGGAGGGAGTGGAGGACAGCTTAATGACACTGATTTTGTGAAATGGAGTGAAAGAGGGAGTGGGTAGGTGTAGATTTAGGGCCACCCACTTTCTCCCTTTTGCATGTGCCTCAACCACTCTCTCCACACAGCTTCCCTTATATAAACCCTTCACTCACTCCCTTTTCACTTCAACCATTCCCAAATGGCTTCTCATAAACGCCTTTCTTCTTTTCTCTTTTTTCTTTTATTAGGAATTGGGGTTTCTTCTGCAGCCAGAAATCTCTTAACTTATGGTGAAGGAAAGCCGGTGAACATTCCGGCATTTGCTTATGGTGCAGGCGGTGGTGCAGGTGGTGGTAGTGGTGGTGGATATGGTTCTCTTGGTGGTTATGGCGGTGGTGGAGGAAATGGAGGTGGTAGTGGCTATGGTTCTGTAGGAGAATATGGTGTTGGTGGCTATGGAAGTGGTGGCGGTGGAGGAAGTGGTGAGGGAGGTGGGTATGGCCCGGGAGGTGGAAATGGATATGGTGGAGGTGGAGGAAGTGGCGGTGGAGGTGGTTATGGTTCTGGGGTTAGATATGGTGAAGTTGGATATGGCTCTGGAGGTTCAGGGTATGGTGGAGGGAGTGGAGGCGGTGCTGGGTATGGTCCTGGAGGTGGAGGGTATGGAGGTGGCGGTGGAAATGGAGGTGGGGCTGGGTATGGTCCTGGAGGTTCTGGATATGGAGGAGGTGGTGGAAATGGGGGTGGTGCAGGGTATGGTCATGAGGGTGGTGGTTATGGTGGGGGTGGCGGAAATGGCGGAGGGGCAGGGTATGGTCATGAGGGTGGTGGATATGGAGGGGGCGGTGGAAATGGCGGTGGGGCAGGGTATGGTCATGAAGGTGGTGGTGGATATGGTGGGGGTGGCGGAAATGGCGGTGGGGCAGGGTATGGTCATGAAGGTGGTGGTGGATATGGAGGTAGTGGATACGGTGGGGGTGGCGGAAATGGCGGTGGGGCAGGGTATGGTTCTGGTGGTGCTGGGTCTGGCGCTGGAGGAGGAGAAGGGGGAGGTTCAGGGTATGGTGGAGAACATGGAGCAGGCTACGGTGGTGGTGGTGGAGGTGGAAATGGCGGCGGTGGAGGTGTAGGATATGGGCCAGGAGGAGAATATGGGTCAGGTTATGGAAGCGGAGCAGGTGGGGGTCATGGTGGAGGAGGAGGAAGTAGTGGTGGAGGAAGCGGTGGAGGTGGTGGAGGAGGGTCGGGATACGGTGGAGGAAGTGCACATGGAGGTGCATCTGGTGGTCATGAAGGAGGATATGGAGGAAGTAGTGGTGGAGGTGGTGGTCATGAGGGAGGATATGGTGGAGGAAGCGCACATGGAGGTGCATCTGGTGGTCATGAAGGAGGATATGGAGGAAGTAGTGGTGGAGGAAGCGGTGGAGGAGGTGGTGGTCATGACGGAGGATATGGTGGTGGAAGCGCACATGGAGGTGCATCTGGTGGTCATGAAGGAGGATATGGAGGAGGAGGTGGTAGCAGCCAAGGCGGTGACCACGGTGGATATGCACCTTGAGAAAGACCTCACCATTACCTTATATATTTAGTATTATTATAAAAAGGGCATATACATATGGTCATTCATCCTTTTTACCCCAAGTAATTAATAGAAAATATAAATCCATGATTGGGAAAAGGGAATAATTAATTATATAATATATCGTAAGAAAAGTGTGATGTTAAAATGGGAAACTCTTGTATCTTCACCTCTCCAAATTTTCTTCATATATAAAATTATTCTCTCTTATTTCCACAAAACCACACCAATTGCATGCATGCTCCCT

Coding sequence (CDS)

ATGGCTTCTCATAAACGCCTTTCTTCTTTTCTCTTTTTTCTTTTATTAGGAATTGGGGTTTCTTCTGCAGCCAGAAATCTCTTAACTTATGGTGAAGGAAAGCCGGTGAACATTCCGGCATTTGCTTATGGTGCAGGCGGTGGTGCAGGTGGTGGTAGTGGTGGTGGATATGGTTCTCTTGGTGGTTATGGCGGTGGTGGAGGAAATGGAGGTGGTAGTGGCTATGGTTCTGTAGGAGAATATGGTGTTGGTGGCTATGGAAGTGGTGGCGGTGGAGGAAGTGGTGAGGGAGGTGGGTATGGCCCGGGAGGTGGAAATGGATATGGTGGAGGTGGAGGAAGTGGCGGTGGAGGTGGTTATGGTTCTGGGGTTAGATATGGTGAAGTTGGATATGGCTCTGGAGGTTCAGGGTATGGTGGAGGGAGTGGAGGCGGTGCTGGGTATGGTCCTGGAGGTGGAGGGTATGGAGGTGGCGGTGGAAATGGAGGTGGGGCTGGGTATGGTCCTGGAGGTTCTGGATATGGAGGAGGTGGTGGAAATGGGGGTGGTGCAGGGTATGGTCATGAGGGTGGTGGTTATGGTGGGGGTGGCGGAAATGGCGGAGGGGCAGGGTATGGTCATGAGGGTGGTGGATATGGAGGGGGCGGTGGAAATGGCGGTGGGGCAGGGTATGGTCATGAAGGTGGTGGTGGATATGGTGGGGGTGGCGGAAATGGCGGTGGGGCAGGGTATGGTCATGAAGGTGGTGGTGGATATGGAGGTAGTGGATACGGTGGGGGTGGCGGAAATGGCGGTGGGGCAGGGTATGGTTCTGGTGGTGCTGGGTCTGGCGCTGGAGGAGGAGAAGGGGGAGGTTCAGGGTATGGTGGAGAACATGGAGCAGGCTACGGTGGTGGTGGTGGAGGTGGAAATGGCGGCGGTGGAGGTGTAGGATATGGGCCAGGAGGAGAATATGGGTCAGGTTATGGAAGCGGAGCAGGTGGGGGTCATGGTGGAGGAGGAGGAAGTAGTGGTGGAGGAAGCGGTGGAGGTGGTGGAGGAGGGTCGGGATACGGTGGAGGAAGTGCACATGGAGGTGCATCTGGTGGTCATGAAGGAGGATATGGAGGAAGTAGTGGTGGAGGTGGTGGTCATGAGGGAGGATATGGTGGAGGAAGCGCACATGGAGGTGCATCTGGTGGTCATGAAGGAGGATATGGAGGAAGTAGTGGTGGAGGAAGCGGTGGAGGAGGTGGTGGTCATGACGGAGGATATGGTGGTGGAAGCGCACATGGAGGTGCATCTGGTGGTCATGAAGGAGGATATGGAGGAGGAGGTGGTAGCAGCCAAGGCGGTGACCACGGTGGATATGCACCTTGA

Protein sequence

MASHKRLSSFLFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGGGSGGGYGSLGGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGYGSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGGGAGYGHEGGGGYGGSGYGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYGGGGGGGNGGGGGVGYGPGGEYGSGYGSGAGGGHGGGGGSSGGGSGGGGGGGSGYGGGSAHGGASGGHEGGYGGSSGGGGGHEGGYGGGSAHGGASGGHEGGYGGSSGGGSGGGGGGHDGGYGGGSAHGGASGGHEGGYGGGGGSSQGGDHGGYAP

Homology

[Close]

BLAST of Cp4.1LG15g02020 vs. NCBI nr
Match: XP_023553671.1 (glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 512 bits (1318), Expect = 4.37e-176
Identity = 452/485 (93.20%), Postives = 452/485 (93.20%), Query Frame = 0


Query: 1   MASHKRLSSFLFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGGGSGGGYGSL 60
           MASHKRLSSFLFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGGGSGGGYGSL
Sbjct: 1   MASHKRLSSFLFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGGGSGGGYGSL 60

Query: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120
           GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY
Sbjct: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120

Query: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180
           GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN
Sbjct: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180

Query: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240
           GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG
Sbjct: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240

Query: 241 GAGYGHEGGGGYGG---------------------------------SGYGGGGGNGGGA 300
           GAGYGHEGGGGYGG                                 SGYGGGGGNGGGA
Sbjct: 241 GAGYGHEGGGGYGGGGGNGGGAGYGHDGGGYGGGGGNGGGAGYGHEGSGYGGGGGNGGGA 300

Query: 301 GYGSGGAGSGAGGGEGGGSGYGGEHGAGYGGGGGGGNGGGGGVGYGPGGEYGSGYGSGAG 360
           GYGSGGAGSGAGGGEGGGSGYGGEHGAGYGGGGGGGNGGGGGVGYGPGGEYGSGYGSGAG
Sbjct: 301 GYGSGGAGSGAGGGEGGGSGYGGEHGAGYGGGGGGGNGGGGGVGYGPGGEYGSGYGSGAG 360

Query: 361 GGHGGGGGSSGGGSGGGGGGGSGYGGGSAHGGASGGHEGGYGGSSGGGGGHEGGYGGGSA 420
           GGHGGGGGSSGGGSGGGGGGGSGYGGGSAHGGASGGHEGGYGGSSGGGGGHEGGYGGGSA
Sbjct: 361 GGHGGGGGSSGGGSGGGGGGGSGYGGGSAHGGASGGHEGGYGGSSGGGGGHEGGYGGGSA 420

Query: 421 HGGASGGHEGGYGGSSGGGSGGGGGGHDGGYGGGSAHGGASGGHEGGYGGGGGSSQGGDH 452
           HGGASGGHEGGYGGSSGGGSGGGGGGHDGGYGGGSAHGGASGGHEGGYGGGGGSSQGGDH
Sbjct: 421 HGGASGGHEGGYGGSSGGGSGGGGGGHDGGYGGGSAHGGASGGHEGGYGGGGGSSQGGDH 480

[Close]

BLAST of Cp4.1LG15g02020 vs. NCBI nr
Match: XP_022967498.1 (glycine-rich cell wall structural protein 1.8-like isoform X50 [Cucurbita maxima])

HSP 1 Score: 370 bits (949), Expect = 1.20e-115
Identity = 348/405 (85.93%), Postives = 349/405 (86.17%), Query Frame = 0


Query: 1   MASHKRLSSFLFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGGGSGGGYGSL 60
           MASHKRLSSF+FFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAG GSGGGYGSL
Sbjct: 1   MASHKRLSSFIFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGAGSGGGYGSL 60

Query: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120
           GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY
Sbjct: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120

Query: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180
           GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN
Sbjct: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180

Query: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240
           GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG
Sbjct: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240

Query: 241 GAGYGHEGGGGYGGSG-------------------------------------------- 300
           GAGYGHEGGGGYGG G                                            
Sbjct: 241 GAGYGHEGGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGA 300

Query: 301 --------YGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYGGGGGGGNGGGG 352
                   YGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYG GGGGGNGGGG
Sbjct: 301 GYGHEGGGYGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYGSGGGGGNGGGG 360

[Close]

BLAST of Cp4.1LG15g02020 vs. NCBI nr
Match: XP_022967497.1 (PE-PGRS family protein PE_PGRS16-like isoform X49 [Cucurbita maxima])

HSP 1 Score: 370 bits (949), Expect = 2.14e-115
Identity = 348/405 (85.93%), Postives = 349/405 (86.17%), Query Frame = 0


Query: 1   MASHKRLSSFLFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGGGSGGGYGSL 60
           MASHKRLSSF+FFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAG GSGGGYGSL
Sbjct: 1   MASHKRLSSFIFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGAGSGGGYGSL 60

Query: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120
           GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY
Sbjct: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120

Query: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180
           GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN
Sbjct: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180

Query: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240
           GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG
Sbjct: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240

Query: 241 GAGYGHEGGGGYGGSG-------------------------------------------- 300
           GAGYGHEGGGGYGG G                                            
Sbjct: 241 GAGYGHEGGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGA 300

Query: 301 --------YGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYGGGGGGGNGGGG 352
                   YGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYG GGGGGNGGGG
Sbjct: 301 GYGHEGGGYGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYGSGGGGGNGGGG 360

[Close]

BLAST of Cp4.1LG15g02020 vs. NCBI nr
Match: XP_022967496.1 (fibroin heavy chain-like isoform X48 [Cucurbita maxima])

HSP 1 Score: 370 bits (949), Expect = 2.10e-114
Identity = 348/405 (85.93%), Postives = 349/405 (86.17%), Query Frame = 0


Query: 1   MASHKRLSSFLFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGGGSGGGYGSL 60
           MASHKRLSSF+FFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAG GSGGGYGSL
Sbjct: 1   MASHKRLSSFIFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGAGSGGGYGSL 60

Query: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120
           GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY
Sbjct: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120

Query: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180
           GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN
Sbjct: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180

Query: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240
           GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG
Sbjct: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240

Query: 241 GAGYGHEGGGGYGGSG-------------------------------------------- 300
           GAGYGHEGGGGYGG G                                            
Sbjct: 241 GAGYGHEGGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGA 300

Query: 301 --------YGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYGGGGGGGNGGGG 352
                   YGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYG GGGGGNGGGG
Sbjct: 301 GYGHEGGGYGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYGSGGGGGNGGGG 360

[Close]

BLAST of Cp4.1LG15g02020 vs. NCBI nr
Match: XP_022967495.1 (fibroin heavy chain-like isoform X47 [Cucurbita maxima])

HSP 1 Score: 370 bits (949), Expect = 2.45e-114
Identity = 348/405 (85.93%), Postives = 349/405 (86.17%), Query Frame = 0


Query: 1   MASHKRLSSFLFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGGGSGGGYGSL 60
           MASHKRLSSF+FFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAG GSGGGYGSL
Sbjct: 1   MASHKRLSSFIFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGAGSGGGYGSL 60

Query: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120
           GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY
Sbjct: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120

Query: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180
           GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN
Sbjct: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180

Query: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240
           GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG
Sbjct: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240

Query: 241 GAGYGHEGGGGYGGSG-------------------------------------------- 300
           GAGYGHEGGGGYGG G                                            
Sbjct: 241 GAGYGHEGGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGA 300

Query: 301 --------YGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYGGGGGGGNGGGG 352
                   YGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYG GGGGGNGGGG
Sbjct: 301 GYGHEGGGYGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYGSGGGGGNGGGG 360

[Close]

BLAST of Cp4.1LG15g02020 vs. ExPASy TrEMBL
Match: A0A6J1HV81 (glycine-rich cell wall structural protein 1.8-like isoform X50 OS=Cucurbita maxima OX=3661 GN=LOC111466985 PE=4 SV=1)

HSP 1 Score: 370 bits (949), Expect = 5.81e-116
Identity = 348/405 (85.93%), Postives = 349/405 (86.17%), Query Frame = 0


Query: 1   MASHKRLSSFLFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGGGSGGGYGSL 60
           MASHKRLSSF+FFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAG GSGGGYGSL
Sbjct: 1   MASHKRLSSFIFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGAGSGGGYGSL 60

Query: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120
           GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY
Sbjct: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120

Query: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180
           GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN
Sbjct: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180

Query: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240
           GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG
Sbjct: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240

Query: 241 GAGYGHEGGGGYGGSG-------------------------------------------- 300
           GAGYGHEGGGGYGG G                                            
Sbjct: 241 GAGYGHEGGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGA 300

Query: 301 --------YGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYGGGGGGGNGGGG 352
                   YGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYG GGGGGNGGGG
Sbjct: 301 GYGHEGGGYGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYGSGGGGGNGGGG 360

[Close]

BLAST of Cp4.1LG15g02020 vs. ExPASy TrEMBL
Match: A0A6J1HR00 (PE-PGRS family protein PE_PGRS16-like isoform X49 OS=Cucurbita maxima OX=3661 GN=LOC111466985 PE=4 SV=1)

HSP 1 Score: 370 bits (949), Expect = 1.04e-115
Identity = 348/405 (85.93%), Postives = 349/405 (86.17%), Query Frame = 0


Query: 1   MASHKRLSSFLFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGGGSGGGYGSL 60
           MASHKRLSSF+FFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAG GSGGGYGSL
Sbjct: 1   MASHKRLSSFIFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGAGSGGGYGSL 60

Query: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120
           GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY
Sbjct: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120

Query: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180
           GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN
Sbjct: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180

Query: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240
           GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG
Sbjct: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240

Query: 241 GAGYGHEGGGGYGGSG-------------------------------------------- 300
           GAGYGHEGGGGYGG G                                            
Sbjct: 241 GAGYGHEGGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGA 300

Query: 301 --------YGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYGGGGGGGNGGGG 352
                   YGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYG GGGGGNGGGG
Sbjct: 301 GYGHEGGGYGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYGSGGGGGNGGGG 360

[Close]

BLAST of Cp4.1LG15g02020 vs. ExPASy TrEMBL
Match: A0A6J1HS93 (fibroin heavy chain-like isoform X48 OS=Cucurbita maxima OX=3661 GN=LOC111466985 PE=4 SV=1)

HSP 1 Score: 370 bits (949), Expect = 1.02e-114
Identity = 348/405 (85.93%), Postives = 349/405 (86.17%), Query Frame = 0


Query: 1   MASHKRLSSFLFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGGGSGGGYGSL 60
           MASHKRLSSF+FFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAG GSGGGYGSL
Sbjct: 1   MASHKRLSSFIFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGAGSGGGYGSL 60

Query: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120
           GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY
Sbjct: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120

Query: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180
           GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN
Sbjct: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180

Query: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240
           GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG
Sbjct: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240

Query: 241 GAGYGHEGGGGYGGSG-------------------------------------------- 300
           GAGYGHEGGGGYGG G                                            
Sbjct: 241 GAGYGHEGGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGA 300

Query: 301 --------YGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYGGGGGGGNGGGG 352
                   YGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYG GGGGGNGGGG
Sbjct: 301 GYGHEGGGYGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYGSGGGGGNGGGG 360

[Close]

BLAST of Cp4.1LG15g02020 vs. ExPASy TrEMBL
Match: A0A6J1HUM8 (fibroin heavy chain-like isoform X47 OS=Cucurbita maxima OX=3661 GN=LOC111466985 PE=4 SV=1)

HSP 1 Score: 370 bits (949), Expect = 1.19e-114
Identity = 348/405 (85.93%), Postives = 349/405 (86.17%), Query Frame = 0


Query: 1   MASHKRLSSFLFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGGGSGGGYGSL 60
           MASHKRLSSF+FFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAG GSGGGYGSL
Sbjct: 1   MASHKRLSSFIFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGAGSGGGYGSL 60

Query: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120
           GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY
Sbjct: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120

Query: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180
           GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN
Sbjct: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180

Query: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240
           GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG
Sbjct: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240

Query: 241 GAGYGHEGGGGYGGSG-------------------------------------------- 300
           GAGYGHEGGGGYGG G                                            
Sbjct: 241 GAGYGHEGGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGA 300

Query: 301 --------YGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYGGGGGGGNGGGG 352
                   YGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYG GGGGGNGGGG
Sbjct: 301 GYGHEGGGYGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYGSGGGGGNGGGG 360

[Close]

BLAST of Cp4.1LG15g02020 vs. ExPASy TrEMBL
Match: A0A6J1HWV8 (fibroin heavy chain-like isoform X46 OS=Cucurbita maxima OX=3661 GN=LOC111466985 PE=4 SV=1)

HSP 1 Score: 370 bits (949), Expect = 1.38e-114
Identity = 348/405 (85.93%), Postives = 349/405 (86.17%), Query Frame = 0


Query: 1   MASHKRLSSFLFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGGGSGGGYGSL 60
           MASHKRLSSF+FFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAG GSGGGYGSL
Sbjct: 1   MASHKRLSSFIFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGAGSGGGYGSL 60

Query: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120
           GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY
Sbjct: 61  GGYGGGGGNGGGSGYGSVGEYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGGY 120

Query: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180
           GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN
Sbjct: 121 GSGVRYGEVGYGSGGSGYGGGSGGGAGYGPGGGGYGGGGGNGGGAGYGPGGSGYGGGGGN 180

Query: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240
           GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG
Sbjct: 181 GGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGGGNGG 240

Query: 241 GAGYGHEGGGGYGGSG-------------------------------------------- 300
           GAGYGHEGGGGYGG G                                            
Sbjct: 241 GAGYGHEGGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGA 300

Query: 301 --------YGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYGGGGGGGNGGGG 352
                   YGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYG GGGGGNGGGG
Sbjct: 301 GYGHEGGGYGGGGGNGGGAGYGSGGAGSGAGGGEGGGSGYGGEHGAGYGSGGGGGNGGGG 360

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g02020 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG15g02020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553671.1	4.37e-176	93.20	glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022967498.1	1.20e-115	85.93	glycine-rich cell wall structural protein 1.8-like isoform X50 [Cucurbita maxima...	[more]
XP_022967497.1	2.14e-115	85.93	PE-PGRS family protein PE_PGRS16-like isoform X49 [Cucurbita maxima]	[more]
XP_022967496.1	2.10e-114	85.93	fibroin heavy chain-like isoform X48 [Cucurbita maxima]	[more]
XP_022967495.1	2.45e-114	85.93	fibroin heavy chain-like isoform X47 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG15g02020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HV81	5.81e-116	85.93	glycine-rich cell wall structural protein 1.8-like isoform X50 OS=Cucurbita maxi...	[more]
A0A6J1HR00	1.04e-115	85.93	PE-PGRS family protein PE_PGRS16-like isoform X49 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1HS93	1.02e-114	85.93	fibroin heavy chain-like isoform X48 OS=Cucurbita maxima OX=3661 GN=LOC111466985...	[more]
A0A6J1HUM8	1.19e-114	85.93	fibroin heavy chain-like isoform X47 OS=Cucurbita maxima OX=3661 GN=LOC111466985...	[more]
A0A6J1HWV8	1.38e-114	85.93	fibroin heavy chain-like isoform X46 OS=Cucurbita maxima OX=3661 GN=LOC111466985...	[more]

BLAST of Cp4.1LG15g02020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01228	EGGSHELL	coord: 131..141 score: 52.27 coord: 171..189 score: 42.76 coord: 7..23 score: 32.35 coord: 103..118 score: 47.66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 379..452

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g02020.1	Cp4.1LG15g02020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane