Cp4.1LG15g01000 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g01000
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	heterogeneous nuclear ribonucleoprotein 1-like
Location	Cp4.1LG15: 733912 .. 738254 (-)
RNA-Seq Expression	Cp4.1LG15g01000
Synteny	Cp4.1LG15g01000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGGGAACCCTAGCCCCAATTTCCCTCCTCGTACTCTCGCGCTCATTTCCTTCCCTCCATTCTTCTCTATCTCTCTCTTTCTCCCTCGACTTTCTCGATCTCCCGGAGCTGACGACTGTAACTCCCCAACTCATTGGCGACCGAGAAGTGGCCCTAATTCCGGTGCTCTTTCAGGCAACGGAGACATGGACTCCGACGAGGGGAAGCTTTTCATCGGAGGAATAGCTTGGGACACCTCCGAGGAGAAGCTCAGAGACTATTTCTCCCACTTTGGCGAAGTTAACCAAGCTGTTATTATGCGCGACAAGACCACTGGCCGTCCCCGTGGCTTCGGCTTTGTCGTCTTCTCTGATCCTTCCGTTCTTGATCAGGTTCTTCAGGATAAACACACCATCGATGGCCGCCAGGTTTTGCCCTCCTCTTCTGAATTTCTATCTGCATTACTTAGGTTTTCTATTTCCACGACGGTTTTGCTTTTTGTTGCCATCATTATGGGGATTTCGGGAATCATATTCTTGTAGTGGTCGTGGACTGTTGATTGCTTTAATTTAGGACCTCATTATTAACAGTGGTTCTGTAGTGAGTGAGACTCGCTCTCTGCCCCCCTTGTATTTCATTAGTTCATAATTGGTTTACTGTTCTTGAGTCTGAGTGGTCCTGAACAGTATGAAACCGGCCAGAATAGTTTGTTTGGTCGTTCGGTTATTTCGTTCTCTATACATACTACCTTCGTATTTCAACTGCAAGGGAAGTCGGAAATGCGAAATGCGGATCATTCTATAATTTGTACCCTTATCAATTGTGTAGTTTTCTCCGGTCATTTGTTATCAAAGGATTTCGTGCGATTACTCATATGGAATGAGTCAATCATTCACTTTGGTATCTTATTGAACAAAAATAGTGATATTGTTCCTCCAATGATCAAGAATTTCGATTTGGGAAGTATCATGATCATCCAATAAGAAGGGTTTCAATTTTTTCAAATGAACAATTTAAAGACCTATTGATTCTAACAACTAATTGCAGAGTTGATCATTTGGACCTTTCAATTCATAGATGTGGATCTCGGACCTATGAATTGGGATATTCCCCAAACCCACAAAGAAAAAAGGAAGTGAGTTAGACAAAAAGAGAAGAAACTTGGACAAAAAGAAACGAAGTGACTTAGACAAATCTTTTTTATCGATAACCTCAGACCAATCAATCGAATATTGATTAATACGTAATCGAGCGAACACTACTTGAAAATGAAAATGGCTCTTCTGCTCAGAAATGAAATGTTCCTGGAAATTCTTGCTCCCATTGGACCATTTGTATCTATATGCATTAGGATCCCGATTCATGGATCTCTCGGTTCGAGAAATCAAAATAAGAGGATCGAACCATNTTTCGTGAATACTTTTTCAGCCAACATGTTGGTTCTGTGGCTTATCATTCGTTTGATCCTGGAACTCAAGAACAGTATCCTGTCCGGCTGATATTGAATTGTACCAGATATTAGCTTCTTGTTTTTTAAACCAAAGGATAATGTATCACTACTTTGTAAAGGAACCTTTATGCCTGAGAAGTTGATTAGCACATGACTTCCTGGTAAAGAATATAAGCGGCATACTAGTCTCATTGTTTTCTCAGGTTAAAAGTGATAAAGAATTCTGTTAGTCTGTTTGCATTGCTTTGTGTGCTAGTCAATTTATGTTTGAGATACGAGGACAGTGAGGAAAGAAATACATATCAACCTGACAGTAGACACATTATGAGATGATTATTTAAAAAGGCTGTTGAAAATGTTGCAAAATTTTATATTTCCTAGCTTGCTATAACTGGTAAGGAGGATGGTTCGTGAGTACATTGAGTTGATATACTTTATTTGCATTTTTGCTGAGTCTTTTCAGCAATTTCAAGTTGTGCTTTGTTGACACAGGTGGAGGCGAAAAGGGCGTTATCAAGAGAAGAACAACAAACTTCCTCAAGAAGTGGGATTTATAACTCTGGCAGAAGTTCTGGAGGTAGTGGATATTTTAGGACCAAGAAAATATTTGTTGGAGGTCTCCCTTCCGCACTAACAGAAGATGGGTTTCGGCAGTATTTTGAAAGTTATGGTCAAGTAACTGATGTAGTGATAATGTATGACCAAAATACTCAAAGACCTCGTGGATTTGGTTTCATAACATTTGACAATGAAGATGCAGTTGATAGAGTACTTTATAAGAGCTTTCACGAACTGAATGGTAAACTTGTAGAGGTGAAACGAGCACTTCCTAAAGATGCAAATCCAGGAAGTGGTGGTCGTGGAGGCTATCAAAATTATGGTGCCTCTGGCACCAATGCTAACAACTTCGATGGTAGATCAGATGGCAATAGATATATGCAACCTCAGTCTACTGCTGGTGGTTTCCCCCCATATGCTGGATATAGTGTATCTAGTTATGGTTATGGAGGTCCAAATAGCGGTGTTCCTTATGGAAGTTATGGTAGTTACGGTGTTGGTATGTATGGTGGTGCTAATACTGGATTTGGTGGTCCAGCTGGGCCATTTGGAAATCCTAGTGCTGTCAATGCTGGTTATCTAAGTGGAGCACCGGGAGCCATGAAAAGTTCTTGGCCCAACCAAGCTCCCGGATATGGTGGTCCTGGCTATGGTGCCAGTCCAGGCTTTGGCGCTGGAGCTCCTTGGAGTGCTTCAGGTACTAGTGGACCTCCTGCCCCAAGGGGTCAATCTCCTAGCGGGGCTTCTGGGTACGGGAATCAGGGTTATTATGGTGGAAATGATGGTACTTACGGTGGATATGGAACCTCTGGTGGACGAGCTGCAAGCGGTCCAAATAGCAACGTTGGTTCTGGTCAAAGTGGAGAGTCACATGGCATGACTGGTGGATACATGGGGAGTGGCTATGGGGAAACTAATGGAAATTCAGGTTATTCTAGTGGTGGCTGGAGATCTGATGCTTCACAGACTCCTGGTGGTTATGGTGGTGGATATGGTGGCACTCAGTCCAGACATGGTTAACCCCACTCACCAAATATTTGCACATCTTATCCTTTTCCACGCTCAAGACATTATGCTTGATAGTAACAAATCCTGAGAATGGTGGGGTCCTCTTCATTCTCAGTGCTATCAGGCAGTGTAATTCTGTAGTTGAATATGTCCATTGCTTTCTAGCAGTAGTAATATTTATTTTTAGGCTTGTTATCTTGAGGTTGCTTATTGTTGTGAGCATTTGGAAAATTGAAAACATTGACGCACTTCTTTTATGTTTTTCTTTCCCTTAATCTCATGTAGAAGCTAGAATAGTATCTATTTACTTTTCTTTCTCTATGTTGATGATGGGTGGCTATGAGGATATTCTATACACTGTTATTGTATTGCAAGTTTACTGTTTTTCATGGTGATTTGGGTATTATGTAGTGCTATCTCTTGTATGCATTCAGTGCTTGCTAAATACTAGGTTTCTGCAATCCTTGGTTGATGTGGCTTTCTTATGGCAGTCAAGATAGAGGTAGGAGATGCTATCAGCTTCTTCCTGTTTTGGGGATTCTTTATAACTTTGTTTGTTTCCACTTTTTTTGAAACGTTTGAGTTTCGAACTGTGGTAAGCACGAGTTATTAAATGGGATTTTGACATGCACAGGAATTTCAGGTGGAGTTCTGGAGCTGCTGAATGCATTGTTTAACAGACCTTTTATGCAGCTAATGGACTAAGGTTTGGATATTCTTCCACTGCCCATCTCTGTTGTGGTATGTCACCCTGACATTCTTATGGGCATAATTAGGTTTTTTTCTTCGATTCTCTAATTTAACTTTCATGCCATTTTCTTCAATTTTTGGAATAGCTCCATAATGTTAGATTATTTAGGTAGTTAGCTCAGTTGTTTGACTTTGTAGAACCGAACTTAGTAACTTAGATGTCTTCTTGATCAAGATAACCGACTTCTTCTCTGCCCTGTCCATAGGATCGATCAAAATCACAGTCGTATGACATAGAGATTTAGTATATTGCGACATACTTATTATTATTATTCTAGCCTCACCTTTGTATTGTCATCCTAACCTTTTATTTTTGCTTCAATATTGAATGTACAATCCCAGATTTAGCACAAATATCAGTGGTATAGCAAGTGCTTGGCAAGCTAGGGCAGTCAAATAACCGGCCTCACTTTCTTCCATTCCCCTAGTTTCCAGCATCTATTTGCTTGGATGTTTTTGTACCTTTTTTTTTTTTCATTTGTAATCTAATGTCATTTACTGTTTCACCCATTAATTGACTAGAGAATTGTGCTTTGTGGTTTTGGTTATAACTATTCTCTTAGTATCGTTTACTTCTTTGTAGTTGATATCTTAGTTT

mRNA sequence

CGGGGAACCCTAGCCCCAATTTCCCTCCTCGTACTCTCGCGCTCATTTCCTTCCCTCCATTCTTCTCTATCTCTCTCTTTCTCCCTCGACTTTCTCGATCTCCCGGAGCTGACGACTGTAACTCCCCAACTCATTGGCGACCGAGAAGTGGCCCTAATTCCGGTGCTCTTTCAGGCAACGGAGACATGGACTCCGACGAGGGGAAGCTTTTCATCGGAGGAATAGCTTGGGACACCTCCGAGGAGAAGCTCAGAGACTATTTCTCCCACTTTGGCGAAGTTAACCAAGCTGTTATTATGCGCGACAAGACCACTGGCCGTCCCCGTGGCTTCGGCTTTGTCGTCTTCTCTGATCCTTCCGTTCTTGATCAGGTTCTTCAGGATAAACACACCATCGATGGCCGCCAGGTGGAGGCGAAAAGGGCGTTATCAAGAGAAGAACAACAAACTTCCTCAAGAAGTGGGATTTATAACTCTGGCAGAAGTTCTGGAGGTAGTGGATATTTTAGGACCAAGAAAATATTTGTTGGAGGTCTCCCTTCCGCACTAACAGAAGATGGGTTTCGGCAGTATTTTGAAAGTTATGGTCAAGTAACTGATGTAGTGATAATGTATGACCAAAATACTCAAAGACCTCGTGGATTTGGTTTCATAACATTTGACAATGAAGATGCAGTTGATAGAGTACTTTATAAGAGCTTTCACGAACTGAATGGTAAACTTGTAGAGGTGAAACGAGCACTTCCTAAAGATGCAAATCCAGGAAGTGGTGGTCGTGGAGGCTATCAAAATTATGGTGCCTCTGGCACCAATGCTAACAACTTCGATGGTAGATCAGATGGCAATAGATATATGCAACCTCAGTCTACTGCTGGTGGTTTCCCCCCATATGCTGGATATAGTGTATCTAGTTATGGTTATGGAGGTCCAAATAGCGGTGTTCCTTATGGAAGTTATGGTAGTTACGGTGTTGGTATGTATGGTGGTGCTAATACTGGATTTGGTGGTCCAGCTGGGCCATTTGGAAATCCTAGTGCTGTCAATGCTGGTTATCTAAGTGGAGCACCGGGAGCCATGAAAAGTTCTTGGCCCAACCAAGCTCCCGGATATGGTGGTCCTGGCTATGGTGCCAGTCCAGGCTTTGGCGCTGGAGCTCCTTGGAGTGCTTCAGGTACTAGTGGACCTCCTGCCCCAAGGGGTCAATCTCCTAGCGGGGCTTCTGGGTACGGGAATCAGGGTTATTATGGTGGAAATGATGGTACTTACGGTGGATATGGAACCTCTGGTGGACGAGCTGCAAGCGGTCCAAATAGCAACGTTGGTTCTGGTCAAAGTGGAGAGTCACATGGCATGACTGGTGGATACATGGGGAGTGGCTATGGGGAAACTAATGGAAATTCAGGTTATTCTAGTGGTGGCTGGAGATCTGATGCTTCACAGACTCCTGGTGGTTATGGTGGTGGATATGGTGGCACTCAGTCCAGACATGGTTAACCCCACTCACCAAATATTTGCACATCTTATCCTTTTCCACGCTCAAGACATTATGCTTGATAGTAACAAATCCTGAGAATGGTGGGGTCCTCTTCATTCTCAGTGCTATCAGGCAGTGTAATTCTGTAGTTGAATATGTCCATTGCTTTCTAGCAGTAGTAATATTTATTTTTAGGCTTGTTATCTTGAGGTTGCTTATTGTTGTGAGCATTTGGAAAATTGAAAACATTGACGCACTTCTTTTATGTTTTTCTTTCCCTTAATCTCATGTAGAAGCTAGAATAGTATCTATTTACTTTTCTTTCTCTATGTTGATGATGGGTGGCTATGAGGATATTCTATACACTGTTATTGTATTGCAAGTTTACTGTTTTTCATGGTGATTTGGGTATTATGTAGTGCTATCTCTTGTATGCATTCAGTGCTTGCTAAATACTAGGTTTCTGCAATCCTTGGTTGATGTGGCTTTCTTATGGCAGTCAAGATAGAGGAATTTCAGGTGGAGTTCTGGAGCTGCTGAATGCATTGTTTAACAGACCTTTTATGCAGCTAATGGACTAAGGTTTGGATATTCTTCCACTGCCCATCTCTGTTGTGATTTAGCACAAATATCAGTGGTATAGCAAGTGCTTGGCAAGCTAGGGCAGTCAAATAACCGGCCTCACTTTCTTCCATTCCCCTAGTTTCCAGCATCTATTTGCTTGGATGTTTTTGTACCTTTTTTTTTTTTCATTTGTAATCTAATGTCATTTACTGTTTCACCCATTAATTGACTAGAGAATTGTGCTTTGTGGTTTTGGTTATAACTATTCTCTTAGTATCGTTTACTTCTTTGTAGTTGATATCTTAGTTT

Coding sequence (CDS)

ATGGACTCCGACGAGGGGAAGCTTTTCATCGGAGGAATAGCTTGGGACACCTCCGAGGAGAAGCTCAGAGACTATTTCTCCCACTTTGGCGAAGTTAACCAAGCTGTTATTATGCGCGACAAGACCACTGGCCGTCCCCGTGGCTTCGGCTTTGTCGTCTTCTCTGATCCTTCCGTTCTTGATCAGGTTCTTCAGGATAAACACACCATCGATGGCCGCCAGGTGGAGGCGAAAAGGGCGTTATCAAGAGAAGAACAACAAACTTCCTCAAGAAGTGGGATTTATAACTCTGGCAGAAGTTCTGGAGGTAGTGGATATTTTAGGACCAAGAAAATATTTGTTGGAGGTCTCCCTTCCGCACTAACAGAAGATGGGTTTCGGCAGTATTTTGAAAGTTATGGTCAAGTAACTGATGTAGTGATAATGTATGACCAAAATACTCAAAGACCTCGTGGATTTGGTTTCATAACATTTGACAATGAAGATGCAGTTGATAGAGTACTTTATAAGAGCTTTCACGAACTGAATGGTAAACTTGTAGAGGTGAAACGAGCACTTCCTAAAGATGCAAATCCAGGAAGTGGTGGTCGTGGAGGCTATCAAAATTATGGTGCCTCTGGCACCAATGCTAACAACTTCGATGGTAGATCAGATGGCAATAGATATATGCAACCTCAGTCTACTGCTGGTGGTTTCCCCCCATATGCTGGATATAGTGTATCTAGTTATGGTTATGGAGGTCCAAATAGCGGTGTTCCTTATGGAAGTTATGGTAGTTACGGTGTTGGTATGTATGGTGGTGCTAATACTGGATTTGGTGGTCCAGCTGGGCCATTTGGAAATCCTAGTGCTGTCAATGCTGGTTATCTAAGTGGAGCACCGGGAGCCATGAAAAGTTCTTGGCCCAACCAAGCTCCCGGATATGGTGGTCCTGGCTATGGTGCCAGTCCAGGCTTTGGCGCTGGAGCTCCTTGGAGTGCTTCAGGTACTAGTGGACCTCCTGCCCCAAGGGGTCAATCTCCTAGCGGGGCTTCTGGGTACGGGAATCAGGGTTATTATGGTGGAAATGATGGTACTTACGGTGGATATGGAACCTCTGGTGGACGAGCTGCAAGCGGTCCAAATAGCAACGTTGGTTCTGGTCAAAGTGGAGAGTCACATGGCATGACTGGTGGATACATGGGGAGTGGCTATGGGGAAACTAATGGAAATTCAGGTTATTCTAGTGGTGGCTGGAGATCTGATGCTTCACAGACTCCTGGTGGTTATGGTGGTGGATATGGTGGCACTCAGTCCAGACATGGTTAA

Protein sequence

MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVLDQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSALTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLVEVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSVSSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSSWPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTYGGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTPGGYGGGYGGTQSRHG

Homology

[Close]

BLAST of Cp4.1LG15g01000 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 4.7e-108
Identity = 250/450 (55.56%), Postives = 300/450 (66.67%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60
           MDSD+GKLF+GGI+W+T E+KLR++F+++GEV+QA++MRDK TGRPRGFGFV+FSDPSVL
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120
           D+VLQ+KH+ID R+V+ KRA+SREEQQ S R+G  N+ RSSGG  Y +TKKIFVGGLP  
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPT 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LT++ FRQYFE YG VTDV IMYDQ T RPRGFGF++FD+EDAVD VL+K+FH+L+GK V
Sbjct: 121 LTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQV 180

Query: 181 EVKRALPKDANPGSGGR-------GGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFP 240
           EVKRALPKDANPG GGR       GGYQ YG    N +++DGR D NR++Q QS   G P
Sbjct: 181 EVKRALPKDANPGGGGRSMGGGGSGGYQGYGG---NESSYDGRMDSNRFLQHQSVGNGLP 240

Query: 241 PYAGYSVSSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGA 300
            Y G S    GYG  ++G  YG+YG Y  G  GG   G G  AG +G  +   AGY S  
Sbjct: 241 SY-GSSGYGAGYGNGSNGAGYGAYGGY-TGSAGG--YGAGATAG-YGATNIPGAGYGSST 300

Query: 301 PGAMKSSWPNQA-PGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGY 360
             A ++SW   A  GYG PGY      G+GA  S  G  G  AP  QSP   SGY NQGY
Sbjct: 301 GVAPRNSWDTPASSGYGNPGY------GSGAAHSGYGVPG-AAPPTQSP---SGYSNQGY 360

Query: 361 ----YGGNDGTYG---GYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNS 420
               Y G+D  YG    YG  GGR + G ++N GS          GGYMG GYG+     
Sbjct: 361 GYGGYSGSDSGYGNQAAYGVVGGRPSGGGSNNPGS----------GGYMGGGYGD----- 410

Query: 421 GYSSGGWRSDASQTPGGYGGGYGGTQSRHG 436
               G WRSD SQ   GYGGGY   Q R G
Sbjct: 421 ----GSWRSDPSQ---GYGGGYNDGQGRQG 410

[Close]

BLAST of Cp4.1LG15g01000 vs. ExPASy Swiss-Prot
Match: Q96DH6 (RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.2e-41
Identity = 129/334 (38.62%), Postives = 174/334 (52.10%), Query Frame = 0


Query: 4   DEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVLDQV 63
           D GK+FIGG++W TS + LRDYFS FGE+ + ++MRD TT R RGFGFV F+DP+ +D+V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 64  L-QDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSALT 123
           L Q  H +D + ++ K A  R  Q                     RTKKIFVGGL +   
Sbjct: 79  LGQPHHELDSKTIDPKVAFPRRAQPKM----------------VTRTKKIFVGGLSANTV 138

Query: 124 EDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLVEV 183
            +  +QYFE +G+V D ++M+D+ T R RGFGF+TF+NED V++V    FHE+N K+VE 
Sbjct: 139 VEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC 198

Query: 184 KRALPKDA--NPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAG-GFPPYAGYS 243
           K+A PK+    PG+ GR     Y       + F        Y    +T G G+P +A   
Sbjct: 199 KKAQPKEVMFPPGTRGRARGLPY-----TMDAFMLGMGMLGYPNFVATYGRGYPGFA--- 258

Query: 244 VSSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKS 303
             SYGY  P  G P  +YG         A      PA P G P A + G ++   G    
Sbjct: 259 -PSYGYQFP--GFPAAAYGPVAAAAVAAARGSGSNPARPGGFPGANSPGPVADLYGP--- 317

Query: 304 SWPNQAPGYGGPGYGASPGFGAGAPWSASGTSGP 334
              +Q  G G     ASP  G+G      G +GP
Sbjct: 319 --ASQDSGVGNYISAASPQPGSG---FGHGIAGP 317

[Close]

BLAST of Cp4.1LG15g01000 vs. ExPASy Swiss-Prot
Match: P51992 (Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.3e-38
Identity = 153/429 (35.66%), Postives = 202/429 (47.09%), Query Frame = 0


Query: 7   KLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVLDQVLQD 66
           KLFIGG++++T+++ LR++F  +G++   V+MRD  T R RGFGFV +S    +D  +  
Sbjct: 28  KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87

Query: 67  K-HTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSALTEDG 126
           + H +DGR VE KRA+SRE+   S+R G            +   KKIFVGG+     E  
Sbjct: 88  RPHKVDGRVVEPKRAVSRED---SARPG-----------AHLTVKKIFVGGIKEDTEEYH 147

Query: 127 FRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLVEVKRA 186
            R YFE YG++  + +M D+ + + RGF F+TFD+ D VD+++ + +H +N    EVK+A
Sbjct: 148 LRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINLHNCEVKKA 207

Query: 187 LPKD----ANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSVS 246
           L K     A+   G  GG  N+   G N    DG   GN         GGF    G    
Sbjct: 208 LSKQEMQTASAQRGRGGGGSNFMGRGGNYGGGDGGGGGN-----FGRGGGFGNRGG---- 267

Query: 247 SYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSSW 306
            YG GG       G  G YG G  G    GFGG  G +G                     
Sbjct: 268 -YGGGG-------GRGGGYGGG--GDGYNGFGGDGGNYGG-------------------- 327

Query: 307 PNQAPGYGGPGYGASPGFG-AGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY 366
               PGYGG GYG SPG+G  G  +   G  G     G    G  GY   G +GG  G Y
Sbjct: 328 ---GPGYGGRGYGGSPGYGNQGGGYGGGGGGG-----GAGGGGYDGYNEGGNFGG--GNY 382

Query: 367 GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP 426
             +G+ GG+  S          SG S G +GG     YG      GY SGG         
Sbjct: 388 NDFGSYGGQQQSNYGPMKAGNFSGRSTGGSGGSSSGPYG-----GGYGSGGGGG------ 382

Query: 427 GGYGGGYGG 430
           GG GG YGG
Sbjct: 448 GGGGGSYGG 382

[Close]

BLAST of Cp4.1LG15g01000 vs. ExPASy Swiss-Prot
Match: P48809 (Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila melanogaster OX=7227 GN=Hrb27C PE=1 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 3.0e-38
Identity = 156/451 (34.59%), Postives = 219/451 (48.56%), Query Frame = 0


Query: 1   MDSDE-GKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSV 60
           M+ DE GKLF+GG++W+T++E L  YF  FG++   V+M++  +GR RGFGFV F+DP+ 
Sbjct: 1   MEEDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTN 60

Query: 61  LDQVLQD-KHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLP 120
           ++ VLQ+  HT+DGR ++ K    R  Q+               G GY    K+F+GGLP
Sbjct: 61  VNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKK------------GGGY----KVFLGGLP 120

Query: 121 SALTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGK 180
           S +TE   R +F  YG+VT+VVIMYDQ  ++ RGFGF++F+ E +V+ V  + +  LNGK
Sbjct: 121 SNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGK 180

Query: 181 LVEVKRALPKDANPGSGGRGGYQN-----YGASGTNANNFDGRSDGNRYMQPQSTAGGFP 240
            VE+K+A P+D   GSGG+    +     YG  G   +++         MQ Q+   G P
Sbjct: 181 QVEIKKAEPRD---GSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGP 240

Query: 241 PYAGYSVSSYGYGGPNSGVPYGSYGS------YGVGMYG-GANTGFGGPAGPFGNPSAVN 300
           P       +   G PN    Y  +G+      YG G  G G+  G+G P GP G P    
Sbjct: 241 PL------NMPIGAPNMMPGYQGWGTSPQQQQYGYGNSGPGSYQGWGAPPGPQGPP---- 300

Query: 301 AGYLSGAPGAMKSSWPNQAPGYGGPGYGASPGFGAGAPWSASG----TSGPPAPRGQSPS 360
                  P     + P Q  GYG  GY        GAP   SG     S    P    P+
Sbjct: 301 -------PQWSNYAGPQQTQGYG--GYDMYNSTSTGAPSGPSGGGSWNSWNMPPNSAGPT 360

Query: 361 GASGYG----NQGYYGGNDGTYGGYGTS---GGRAASGPNSNVGSGQSGESHGMTGG--- 420
           GA G G       Y        GG  T+   GG   +GP ++     S   +G  G    
Sbjct: 361 GAPGAGAGTATDMYSRAQAWATGGPSTTGPVGGMPRTGPGNSASKSGSEYDYGGYGSGYD 413

[Close]

BLAST of Cp4.1LG15g01000 vs. ExPASy Swiss-Prot
Match: P51968 (Heterogeneous nuclear ribonucleoprotein A3 homolog 1 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 4.0e-38
Identity = 153/429 (35.66%), Postives = 202/429 (47.09%), Query Frame = 0


Query: 7   KLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVLDQVLQD 66
           KLFIGG++++T+++ LR++F  +G++   V+MRD  T R RGFGFV +S    +D  +  
Sbjct: 28  KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87

Query: 67  K-HTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSALTEDG 126
           + H +DGR VE KRA+SRE+   S+R G            +   KKIFVGG+     E  
Sbjct: 88  RPHKVDGRVVEPKRAVSRED---SARPG-----------AHLTVKKIFVGGIKEDTEEYH 147

Query: 127 FRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLVEVKRA 186
            R Y ESYG++  + +M D+ + + RGF F+TFD+ D VD+++ + +H +NG   EVK+A
Sbjct: 148 LRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 207

Query: 187 LPKD----ANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSVS 246
           L K     A+   G  GG  N+   G N    DG + G      +   GGF    G    
Sbjct: 208 LSKQEMQTASAQRGRGGGGSNFMGRGGNYGGGDGGNFG------RGGGGGFGNRGG---- 267

Query: 247 SYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSSW 306
            YG GG   G      G YG G  G    GFGG  G +G                     
Sbjct: 268 -YGGGGGRGG------GGYGGG--GDGYNGFGGDGGNYGG-------------------- 327

Query: 307 PNQAPGYGGPGYGASPGFG-AGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY 366
               PGYGG GYG SPG+G  G  +   G             G  GY   G +GG  G Y
Sbjct: 328 ---GPGYGGRGYGGSPGYGNQGGGYGGGG------------GGYDGYNESGNFGG--GNY 370

Query: 367 GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP 426
             +G  GG+  S      G   SG S G      GSG G   G  GY SGG         
Sbjct: 388 NDFGNYGGQQQSNYGPMKGGSFSGRSSG------GSGSGPYGG--GYGSGG--------G 370

Query: 427 GGYGGGYGG 430
           GG GG YGG
Sbjct: 448 GGGGGSYGG 370

[Close]

BLAST of Cp4.1LG15g01000 vs. NCBI nr
Match: XP_023554233.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 838 bits (2165), Expect = 5.12e-306
Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60
           MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240
           EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300
           SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS
Sbjct: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300

Query: 301 WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY 360
           WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY
Sbjct: 301 WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY 360

Query: 361 GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP 420
           GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP
Sbjct: 361 GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP 420

Query: 421 GGYGGGYGGTQSRHG 435
           GGYGGGYGGTQSRHG
Sbjct: 421 GGYGGGYGGTQSRHG 435

[Close]

BLAST of Cp4.1LG15g01000 vs. NCBI nr
Match: KAG6571542.1 (Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 835 bits (2158), Expect = 1.72e-304
Identity = 433/435 (99.54%), Postives = 435/435 (100.00%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60
           MDSDEGKLFIGGIAWDTSEEKLR+YFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLREYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTS+RSGIYNSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240
           EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300
           SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS
Sbjct: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300

Query: 301 WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY 360
           WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY
Sbjct: 301 WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY 360

Query: 361 GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP 420
           GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP
Sbjct: 361 GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP 420

Query: 421 GGYGGGYGGTQSRHG 435
           GGYGGGYGGTQSRHG
Sbjct: 421 GGYGGGYGGTQSRHG 435

[Close]

BLAST of Cp4.1LG15g01000 vs. NCBI nr
Match: XP_022963595.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata])

HSP 1 Score: 833 bits (2153), Expect = 3.45e-304
Identity = 433/435 (99.54%), Postives = 434/435 (99.77%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60
           MDSDEGKLFIGGIAWDTSEEKLR+YFS FGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLREYFSQFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240
           EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300
           SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS
Sbjct: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300

Query: 301 WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY 360
           WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY
Sbjct: 301 WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY 360

Query: 361 GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP 420
           GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP
Sbjct: 361 GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP 420

Query: 421 GGYGGGYGGTQSRHG 435
           GGYGGGYGGTQSRHG
Sbjct: 421 GGYGGGYGGTQSRHG 435

[Close]

BLAST of Cp4.1LG15g01000 vs. NCBI nr
Match: KAG7011286.1 (Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 835 bits (2158), Expect = 6.69e-304
Identity = 433/435 (99.54%), Postives = 435/435 (100.00%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60
           MDSDEGKLFIGGIAWDTSEEKLR+YFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL
Sbjct: 65  MDSDEGKLFIGGIAWDTSEEKLREYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 124

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTS+RSGIYNSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 125 DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 184

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
Sbjct: 185 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 244

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240
           EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV
Sbjct: 245 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 304

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300
           SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS
Sbjct: 305 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 364

Query: 301 WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY 360
           WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY
Sbjct: 365 WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY 424

Query: 361 GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP 420
           GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP
Sbjct: 425 GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP 484

Query: 421 GGYGGGYGGTQSRHG 435
           GGYGGGYGGTQSRHG
Sbjct: 485 GGYGGGYGGTQSRHG 499

[Close]

BLAST of Cp4.1LG15g01000 vs. NCBI nr
Match: XP_022967263.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima])

HSP 1 Score: 827 bits (2136), Expect = 1.35e-301
Identity = 430/435 (98.85%), Postives = 431/435 (99.08%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60
           MDSDEGKLFIGGIAWDTSEEKLR+YFS FGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLREYFSEFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240
           EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300
           SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS
Sbjct: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300

Query: 301 WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY 360
           WPNQ P YGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY
Sbjct: 301 WPNQGPRYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY 360

Query: 361 GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP 420
           GGYGTSGGRAASGPNSNVGSGQSGE HGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP
Sbjct: 361 GGYGTSGGRAASGPNSNVGSGQSGEPHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP 420

Query: 421 GGYGGGYGGTQSRHG 435
           GGYGGGYGGTQSRHG
Sbjct: 421 GGYGGGYGGTQSRHG 435

[Close]

BLAST of Cp4.1LG15g01000 vs. ExPASy TrEMBL
Match: A0A6J1HIF4 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111463883 PE=4 SV=1)

HSP 1 Score: 833 bits (2153), Expect = 1.67e-304
Identity = 433/435 (99.54%), Postives = 434/435 (99.77%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60
           MDSDEGKLFIGGIAWDTSEEKLR+YFS FGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLREYFSQFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240
           EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300
           SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS
Sbjct: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300

Query: 301 WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY 360
           WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY
Sbjct: 301 WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY 360

Query: 361 GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP 420
           GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP
Sbjct: 361 GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP 420

Query: 421 GGYGGGYGGTQSRHG 435
           GGYGGGYGGTQSRHG
Sbjct: 421 GGYGGGYGGTQSRHG 435

[Close]

BLAST of Cp4.1LG15g01000 vs. ExPASy TrEMBL
Match: A0A6J1HUK4 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111466841 PE=4 SV=1)

HSP 1 Score: 827 bits (2136), Expect = 6.51e-302
Identity = 430/435 (98.85%), Postives = 431/435 (99.08%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60
           MDSDEGKLFIGGIAWDTSEEKLR+YFS FGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLREYFSEFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240
           EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300
           SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS
Sbjct: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300

Query: 301 WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY 360
           WPNQ P YGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY
Sbjct: 301 WPNQGPRYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY 360

Query: 361 GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP 420
           GGYGTSGGRAASGPNSNVGSGQSGE HGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP
Sbjct: 361 GGYGTSGGRAASGPNSNVGSGQSGEPHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP 420

Query: 421 GGYGGGYGGTQSRHG 435
           GGYGGGYGGTQSRHG
Sbjct: 421 GGYGGGYGGTQSRHG 435

[Close]

BLAST of Cp4.1LG15g01000 vs. ExPASy TrEMBL
Match: A0A0A0L8W1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608180 PE=4 SV=1)

HSP 1 Score: 786 bits (2030), Expect = 9.60e-286
Identity = 410/436 (94.04%), Postives = 420/436 (96.33%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60
           MDSDEGKLFIGGIAWDTSEEKLRDYFS FGEV QAVIMRDKTTGRPRGFGFVVFSDPS+L
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTS+RSGI NSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240
           EVKRALPKDANPGSGGR GYQNYGASGTN+N+FDGRSDGNRYMQPQSTAGGFPPY+GYSV
Sbjct: 181 EVKRALPKDANPGSGGRAGYQNYGASGTNSNSFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300
           S YGYGGPNSGVPYGSYGSYGVGMYGGAN GFGGPAGPFGNP AVNAGYLSGAPGAMKSS
Sbjct: 241 SGYGYGGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300

Query: 301 WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPP-APRGQSPSGASGYGNQGYYGGNDGT 360
           W NQAPGYGGPGYGASPGFGA APW+ASGT  PP APRGQSPSGASGYGNQGYYGGNDGT
Sbjct: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360

Query: 361 YGGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQT 420
           YGGYG SGGRAAS PNSNVG+GQSGE HG++GGYMGSGYG+TNGNSGYSSGGWRSDASQT
Sbjct: 361 YGGYGASGGRAASAPNSNVGTGQSGEQHGVSGGYMGSGYGDTNGNSGYSSGGWRSDASQT 420

Query: 421 PGGYGGGYGGTQSRHG 435
           PGGYGGGYGG QSRHG
Sbjct: 421 PGGYGGGYGGNQSRHG 436

[Close]

BLAST of Cp4.1LG15g01000 vs. ExPASy TrEMBL
Match: A0A1S3BHX8 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucumis melo OX=3656 GN=LOC103489847 PE=4 SV=1)

HSP 1 Score: 783 bits (2021), Expect = 2.26e-284
Identity = 407/436 (93.35%), Postives = 418/436 (95.87%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60
           MDSDEGKLFIGGIAWDTSEEKLRDYFS FGEV QAVIMRDKTTGRPRGFGFVVFSDPS+L
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTS+RSGI NSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240
           EVKRALPKDANPGSGGRGGYQNYGASGTN+N+FDGRSDGNRYMQPQSTAGGFPPY+GYSV
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300
           S YGYGGPNSGVPYGSYGSYGVGMYGGAN GFGGPAGPFGNP AVNAGYLSGAPGAMKSS
Sbjct: 241 SGYGYGGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300

Query: 301 WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPP-APRGQSPSGASGYGNQGYYGGNDGT 360
           W NQAPGYGGPGYGASPGFGA APW+ASGT  PP APRGQSPSGASGYGNQGYYGGNDGT
Sbjct: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360

Query: 361 YGGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQT 420
           YGGYG SGGR+AS PNSNVG+GQSGE HGM+GGYMGSGYG+ NGNSGY+ GGWRSD SQT
Sbjct: 361 YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQT 420

Query: 421 PGGYGGGYGGTQSRHG 435
           PGGYGGGYGG QSRHG
Sbjct: 421 PGGYGGGYGGNQSRHG 436

[Close]

BLAST of Cp4.1LG15g01000 vs. ExPASy TrEMBL
Match: A0A6J1DNH8 (heterogeneous nuclear ribonucleoprotein 1-like OS=Momordica charantia OX=3673 GN=LOC111022725 PE=4 SV=1)

HSP 1 Score: 775 bits (2001), Expect = 2.61e-281
Identity = 406/437 (92.91%), Postives = 416/437 (95.19%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60
           MDSDEGKLFIGGIAWDTSEEKLRDYFS FG+V QAVIMRDKTTGRPRGFGFVVFSDPS L
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGDVIQAVIMRDKTTGRPRGFGFVVFSDPSAL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSG +NSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGSFNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFE+YGQVTDVVIMYDQNTQRPRGFGFITFDNED+VDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFENYGQVTDVVIMYDQNTQRPRGFGFITFDNEDSVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240
           EVKRALPKDANPGSGGRGGYQNYGASGTN NNFDGRSDGNRYMQPQSTAGGFPPY+GYSV
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNVNNFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240

Query: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300
           SSYGYGGPNSGVPYGSYGSYGVGMYGGA+ GFGGPAGPFGNPSAVNAGYLSGAPG MKS+
Sbjct: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGASAGFGGPAGPFGNPSAVNAGYLSGAPGGMKST 300

Query: 301 WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPP-APRGQSPSGASGYGNQGYYGGNDGT 360
           W NQAPGYGGPGYGASPGFGA APWS SG  GPP APRGQSPSGASGYGNQGYYGG+DG 
Sbjct: 301 WTNQAPGYGGPGYGASPGFGAAAPWSGSGAGGPPSAPRGQSPSGASGYGNQGYYGGSDGP 360

Query: 361 YGGYGTSGGRAASGPNSNVGSGQSGESHGMTGG-YMGSGYGETNGNSGYSSGGWRSDASQ 420
           YGGYG SGGRA S PNSNVGSG SGE HGM+GG YMGSGYG+TNGNSGYSSGGWRSDASQ
Sbjct: 361 YGGYGASGGRATSAPNSNVGSGSSGEPHGMSGGGYMGSGYGDTNGNSGYSSGGWRSDASQ 420

Query: 421 TPGGYGGGYGGTQSRHG 435
           TPG YGGGYGGTQSRHG
Sbjct: 421 TPGAYGGGYGGTQSRHG 437

[Close]

BLAST of Cp4.1LG15g01000 vs. TAIR 10
Match: AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 392.9 bits (1008), Expect = 3.4e-109
Identity = 250/450 (55.56%), Postives = 300/450 (66.67%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60
           MDSD+GKLF+GGI+W+T E+KLR++F+++GEV+QA++MRDK TGRPRGFGFV+FSDPSVL
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120
           D+VLQ+KH+ID R+V+ KRA+SREEQQ S R+G  N+ RSSGG  Y +TKKIFVGGLP  
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPT 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LT++ FRQYFE YG VTDV IMYDQ T RPRGFGF++FD+EDAVD VL+K+FH+L+GK V
Sbjct: 121 LTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQV 180

Query: 181 EVKRALPKDANPGSGGR-------GGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFP 240
           EVKRALPKDANPG GGR       GGYQ YG    N +++DGR D NR++Q QS   G P
Sbjct: 181 EVKRALPKDANPGGGGRSMGGGGSGGYQGYGG---NESSYDGRMDSNRFLQHQSVGNGLP 240

Query: 241 PYAGYSVSSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGA 300
            Y G S    GYG  ++G  YG+YG Y  G  GG   G G  AG +G  +   AGY S  
Sbjct: 241 SY-GSSGYGAGYGNGSNGAGYGAYGGY-TGSAGG--YGAGATAG-YGATNIPGAGYGSST 300

Query: 301 PGAMKSSWPNQA-PGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGY 360
             A ++SW   A  GYG PGY      G+GA  S  G  G  AP  QSP   SGY NQGY
Sbjct: 301 GVAPRNSWDTPASSGYGNPGY------GSGAAHSGYGVPG-AAPPTQSP---SGYSNQGY 360

Query: 361 ----YGGNDGTYG---GYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNS 420
               Y G+D  YG    YG  GGR + G ++N GS          GGYMG GYG+     
Sbjct: 361 GYGGYSGSDSGYGNQAAYGVVGGRPSGGGSNNPGS----------GGYMGGGYGD----- 410

Query: 421 GYSSGGWRSDASQTPGGYGGGYGGTQSRHG 436
               G WRSD SQ   GYGGGY   Q R G
Sbjct: 421 ----GSWRSDPSQ---GYGGGYNDGQGRQG 410

[Close]

BLAST of Cp4.1LG15g01000 vs. TAIR 10
Match: AT2G33410.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 380.6 bits (976), Expect = 1.7e-105
Identity = 246/442 (55.66%), Postives = 293/442 (66.29%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60
           M+SD+GKLFIGGI+WDT E  LR+YFS+FGEV Q  +MR+K TGRPRGFGFV FSDP+V+
Sbjct: 1   MESDQGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVI 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120
           D+VLQDKH ID R V+ KRA+SREEQ  + RSG +N+ R+       RTKKIFVGGLP A
Sbjct: 61  DRVLQDKHHIDNRDVDVKRAMSREEQSPAGRSGTFNASRNFDSGANVRTKKIFVGGLPPA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LT D FR YFE+YG V+D VIM DQ TQRPRGFGF++FD+ED+VD VL+K+FH+LNGK V
Sbjct: 121 LTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNGKQV 180

Query: 181 EVKRALPKDANP--------GSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGF 240
           EVKRALPKDANP        GSGG GG+  YG SG   + ++GR D NRYMQPQ+T  G+
Sbjct: 181 EVKRALPKDANPGIASGGGRGSGGAGGFPGYGGSG--GSGYEGRVDSNRYMQPQNTGSGY 240

Query: 241 PPYAGYSVSSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAG-PFGNPSAVNAGYLS 300
           PPY G   S YG G       YG YGS GVG YGG   G+G PAG P+GNPS   AG+ S
Sbjct: 241 PPYGG---SGYGTG-------YG-YGSNGVG-YGGFG-GYGNPAGAPYGNPSVPGAGFGS 300

Query: 301 GAPGAMKSSWPNQAP-GYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQ 360
           G     +SSW  QAP GYG  GYG +      APW  SG  G  A  GQ+ + A GYG+Q
Sbjct: 301 GP----RSSWGAQAPSGYGNVGYGNA------APWGGSGGPG-SAVMGQAGASA-GYGSQ 360

Query: 361 GY-YGGNDGTYG---GYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSG 420
           GY YGGND +YG    YG  GGR+ + PN++ G G +    G        GYG   GN+G
Sbjct: 361 GYGYGGNDSSYGTPSAYGAVGGRSGNMPNNHGGGGYADALDG------SGGYGNHQGNNG 396

Query: 421 YSSGGWRSDASQTPGGYGGGYG 429
            +             GYGGGYG
Sbjct: 421 QA-------------GYGGGYG 396

[Close]

BLAST of Cp4.1LG15g01000 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 240.4 bits (612), Expect = 2.8e-63
Identity = 200/472 (42.37%), Postives = 255/472 (54.03%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60
           M SD GKLFIGGI+WDT+EE+L++YFS FGEV +AVI++D+TTGR RGFGFVVF+DP+V 
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120
           + V+ +KH IDGR VEAK+A+ R++Q   +RS   +   S GG G  RT+KIFVGGLPS+
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPG--RTRKIFVGGLPSS 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           +TE  F+ YFE +G  TDVV+MYD NTQRPRGFGFIT+D+E+AV++VL K+FHELNGK+V
Sbjct: 121 VTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMV 180

Query: 181 EVKRALPKDANPGSGGR--GGYQNYGASGTNANNFDGRSDGNRYMQPQSTA-------GG 240
           EVKRA+PK+ +PG      G   +YG +  N N  +G + G     P +         G 
Sbjct: 181 EVKRAVPKELSPGPSRSPLGAGYSYGVNRVN-NLLNGYAQG---FNPAAVGGYGLRMDGR 240

Query: 241 FPPY----AGYSVSSYGYG-----------GPNSGVPYGSYGSYGVGM---YGGANTGFG 300
           F P     +G++  S GYG           G   G  Y     YG GM   Y G    FG
Sbjct: 241 FSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFG 300

Query: 301 GPAGPFGNPSAVNAGYLSGAPGAMKSSWPNQAP-GYGGPGYGASPGFGAGAPWSASGTSG 360
              G  G     N+ + S      ++ W N     Y      ++     G   S + T  
Sbjct: 301 PAVGYEGGNGGGNSSFFS---SVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLS 360

Query: 361 PPAPRGQSPSGASGYGNQGY--------YGGNDGTYGGYGTSGGRAASGPNSN---VGSG 420
            P        GA G GN           YGGN  +  G GT GG AA  P +N     S 
Sbjct: 361 GPFGNSGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGLGT-GGYAARNPGANKAAPSSS 420

Query: 421 QSGESHGMTGGYMGSGYGETNGNSG-YSSGGWRSDASQTPG------GYGGG 427
            S  S     GY  +G  E  GN   YS   WRS   +T G      G GGG
Sbjct: 421 FSSASATNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYGIGGG 462

[Close]

BLAST of Cp4.1LG15g01000 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 240.4 bits (612), Expect = 2.8e-63
Identity = 200/472 (42.37%), Postives = 255/472 (54.03%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60
           M SD GKLFIGGI+WDT+EE+L++YFS FGEV +AVI++D+TTGR RGFGFVVF+DP+V 
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120
           + V+ +KH IDGR VEAK+A+ R++Q   +RS   +   S GG G  RT+KIFVGGLPS+
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPG--RTRKIFVGGLPSS 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           +TE  F+ YFE +G  TDVV+MYD NTQRPRGFGFIT+D+E+AV++VL K+FHELNGK+V
Sbjct: 121 VTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMV 180

Query: 181 EVKRALPKDANPGSGGR--GGYQNYGASGTNANNFDGRSDGNRYMQPQSTA-------GG 240
           EVKRA+PK+ +PG      G   +YG +  N N  +G + G     P +         G 
Sbjct: 181 EVKRAVPKELSPGPSRSPLGAGYSYGVNRVN-NLLNGYAQG---FNPAAVGGYGLRMDGR 240

Query: 241 FPPY----AGYSVSSYGYG-----------GPNSGVPYGSYGSYGVGM---YGGANTGFG 300
           F P     +G++  S GYG           G   G  Y     YG GM   Y G    FG
Sbjct: 241 FSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFG 300

Query: 301 GPAGPFGNPSAVNAGYLSGAPGAMKSSWPNQAP-GYGGPGYGASPGFGAGAPWSASGTSG 360
              G  G     N+ + S      ++ W N     Y      ++     G   S + T  
Sbjct: 301 PAVGYEGGNGGGNSSFFS---SVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLS 360

Query: 361 PPAPRGQSPSGASGYGNQGY--------YGGNDGTYGGYGTSGGRAASGPNSN---VGSG 420
            P        GA G GN           YGGN  +  G GT GG AA  P +N     S 
Sbjct: 361 GPFGNSGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGLGT-GGYAARNPGANKAAPSSS 420

Query: 421 QSGESHGMTGGYMGSGYGETNGNSG-YSSGGWRSDASQTPG------GYGGG 427
            S  S     GY  +G  E  GN   YS   WRS   +T G      G GGG
Sbjct: 421 FSSASATNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYGIGGG 462

[Close]

BLAST of Cp4.1LG15g01000 vs. TAIR 10
Match: AT5G55550.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 238.0 bits (606), Expect = 1.4e-62
Identity = 175/400 (43.75%), Postives = 230/400 (57.50%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60
           M+SD GKLFIGGI+WDT EE+LRDYFS++G+V +AVIMRD+ TGR RGFGF+VF+DP V 
Sbjct: 1   MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSR--SGIYNSGRSSGGSGYFRTKKIFVGGLP 120
           ++V+ DKH IDGR VEAK+A+ R++QQ   R  S I+      GG G  RTKKIFVGGLP
Sbjct: 61  ERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGG--RTKKIFVGGLP 120

Query: 121 SALTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGK 180
           S++TE+ F+ YF+ +G + DVV+MYD NTQRPRGFGFITFD++DAVDRVL+K+FHELNGK
Sbjct: 121 SSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGK 180

Query: 181 LVEVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGY 240
           LVEVKRA+PK+ +P S  R       ASG N      R   N Y         F P  G+
Sbjct: 181 LVEVKRAVPKEISPVSNIRSPL----ASGVNYGGGSNRMPANSYF------NNFAPGPGF 240

Query: 241 SVSSYGYG---GPNSGVPYGSYGSYGVGMYG----GANTGFGGPAGPFGNPSAVNAGYLS 300
             S    G    P  G    +  ++G+G+        N    G +  FG     +  Y +
Sbjct: 241 YNSLGPVGRRFSPVIGSGRNAVSAFGLGLNHDLSLNLNPSCDGTSSTFGYNRIPSNPYFN 300

Query: 301 GAP--------GAMKSSWP---NQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQS 360
           GA         G  ++  P   N    +G     A PG      W+ + ++G        
Sbjct: 301 GASPNRYTSPIGHNRTESPYNSNNRDLWGNRTDTAGPG------WNLNVSNGNNRGNWGL 360

Query: 361 PSGASGYGNQGYYGGNDGTYGGYGTSGGRAASGPNSNVGS 381
           PS ++   +   +G N      YGTS G ++S  N   GS
Sbjct: 361 PSSSAVSNDNNGFGRN------YGTSSGLSSSPFNGFEGS 376

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g01000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	4.7e-108	55.56	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
Q96DH6	2.2e-41	38.62	RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1	[more]
P51992	2.3e-38	35.66	Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus laevis OX=8355 P...	[more]
P48809	3.0e-38	34.59	Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila melanogaster OX=7227 G...	[more]
P51968	4.0e-38	35.66	Heterogeneous nuclear ribonucleoprotein A3 homolog 1 OS=Xenopus laevis OX=8355 P...	[more]

BLAST of Cp4.1LG15g01000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023554233.1	5.12e-306	100.00	heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6571542.1	1.72e-304	99.54	Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp...	[more]
XP_022963595.1	3.45e-304	99.54	heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata]	[more]
KAG7011286.1	6.69e-304	99.54	Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp...	[more]
XP_022967263.1	1.35e-301	98.85	heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG15g01000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HIF4	1.67e-304	99.54	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1HUK4	6.51e-302	98.85	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A0A0L8W1	9.60e-286	94.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608180 PE=4 SV=1	[more]
A0A1S3BHX8	2.26e-284	93.35	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1DNH8	2.61e-281	92.91	heterogeneous nuclear ribonucleoprotein 1-like OS=Momordica charantia OX=3673 GN...	[more]

BLAST of Cp4.1LG15g01000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14300.1	3.4e-109	55.56	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G33410.1	1.7e-105	55.66	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.1	2.8e-63	42.37	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.2	2.8e-63	42.37	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G55550.1	1.4e-62	43.75	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 111..183 e-value: 7.7E-24 score: 95.2 coord: 7..78 e-value: 1.3E-22 score: 91.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 112..177 e-value: 3.3E-16 score: 58.9 coord: 8..75 e-value: 1.5E-16 score: 59.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..82 score: 17.728121
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 110..187 score: 18.137451
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 108..191 e-value: 9.6E-26 score: 91.9 coord: 4..88 e-value: 1.3E-26 score: 94.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 324..350
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 397..416
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 365..435
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 332..349
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 369..389
None	No IPR available	PANTHER	PTHR48035:SF1	SUBFAMILY NOT NAMED	coord: 1..434
None	No IPR available	PANTHER	PTHR48035	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1	coord: 1..434
None	No IPR available	CDD	cd12325	RRM1_hnRNPA_hnRNPD_like	coord: 8..78 e-value: 2.04884E-37 score: 128.858
IPR034131	DAZ-associated protein 1, RNA recognition motif 2	CDD	cd12327	RRM2_DAZAP1	coord: 108..187 e-value: 9.13894E-45 score: 148.668
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 109..212
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g01000.1	Cp4.1LG15g01000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding