Cp4.1LG15g00760 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG15g00760
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionactin-depolymerizing factor-like
LocationCp4.1LG15: 569097 .. 573298 (-)
RNA-Seq ExpressionCp4.1LG15g00760
SyntenyCp4.1LG15g00760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTTTTTAGTACAAAAAAAAAAAAAAAACTTTGAAAGTGAAGAATATTTCAGTTTGATTGTTTGGGAAATTGGGAGGATTAGCCATTGGGTCTCATTTCCTTTCCCTTTCTCTTCTTTCTATATCTTCTGCCTCTGGTTCTTGTGCCTACCATCTCTGATCTTTCTTCTCCTCCTCCCTTTGCTTAAGCTTCTTAATCGCCGCCGCTTCTCCGGTCATCATGTCGTTCAGAGGCCTCCGACGGGTATCTTTATGTTCTTACTTTCATGTTTTCTTTGCTTTTAACTCAACTACATGTCAACTGGGAAACTGGGTTTTGTTCTGATTTGATGCTGATTATGTGTATCTCTTGATTCTTAACCCATTTTTGATCTTTGAGAACTACCCATCTTGTGGAGCCTGCATATATGTATTTTGTGACCTTAACTTCTTGCTTTTGTTCTGCAAATATGGTGTGTTTTGGTGAAAAAAGTTGGATTAGGGAGGTTATGTTATGGCTCTGAAAGCTTTGATTTAAAGGGAGGAAGTTATGATCCTTACTGATCAGGTTTTGGAGGTGGAGGGTGGGGTCTGATTCTGTGCCAGTGTCTTCTTCTTTGTTCGTTCTGCAATTTCTTTTTAGAAACTTTAGGATTATAAAACTTGAATCTATTTGGGATCTCGGGATTAATCATGGTGTTCTGCTCTGTTTGTTTACTTTGTTGGTATATGTGAGATCCCACGTTGATTGAAGAGAGGAACGAGTGCTACTGAGGACGTTGGGCTTCTAAAGAAGCTGGATTGTGAGATCCCACATCGGTTGGAGAAGGGAACGAGTGCCAACGAGGACGTTGGACTCCGAGAGGGGGTGGATTGTGAGATCCCACATCGATTGTAGAGGGGGACGATTGTCAGTGAGGACGCTGGGCCCTGAAAGGGGGTGGACTGTAAGATCCCACATTGGTTGGAGAGGGGAACGAGTGCCAACGAGGACGCTGGACTCCGAGAGGGGGTGGATTGTGAGACCCCACATCGATTGTAGAGGGGGACGATTGTCAGTGAGGACACTGGGCCCTGAAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAGTGTCAGTGAGGACGTTGGGCCCCGAAAGGGAGTGAATTGTGAGATCCCATATCGGTTGGAGTGTCAGCGAGGACGCTGGTCCTGAAAGGGGGTGGATTGTGAGATCCCACGTCGATTGGAGAGGGGAACAAATGCCAGCGAGGACGTTGGGCCCTGAAAGGGGGTGGATTGTGAGATCCCACATTGGTTGAAGAAGAAAACGAAGCATTGTTTATAAGGGTGTGGAAACCACTCCCTAGCAAAACTGGGAAGCTGTTACTGTTATTTGTTGATGTGATTCCTCCATGGACTTCTATTTGATTGCTTGACATTTATGAATTACCTTTGCAGCAAAACACTTTATCTGCAATGGGTGTGAATGAACACACCAAGAAAATATTTTCTGAGCTACAGAGAAAGAAAATGTATCGATACGTGATCTTTAAGGTCGATGAAAAGAAACGAGAGGTGGTGGTTGACAAGATTGGCAGTCCTGCAGAGAGCTATGAAGATTTCACTGCTGCTCTGCCCGACAACGATTGTCGTTACGCTGTCTATGATTTTGATTTCGTGACATCCGACAACTGCCAGAAGAGCAAGATATTTTTCATAGCATGGTTAGCTTTTACCTATCATCAACTTACTCTTATCTTTCTTATTGCTATGTTAATGTCTACTTGATATACATTGTTCATTGTGTTGCTCCACAACACACATACTAACGAAAACTGTGAGATCCCCCGTCGGTTGGAGAGGAGAACGAAGTATTCCTTATGAGGGTGTGGAAAACCTCTTCCTAGCAGACGTGTTTTAAAACCGTGAGGCTGATGGCGATACGTAACAGAGCCAAAACGGACAATATTTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAAAGTTAGACACCGGGCAGTGTGCCAGCGAGGACACTGGGGCCCCCAAAATGGGTGGATTGTGAGATCCCACGTCGGTTGGAGAGAGAGGAACGAAACACTCCTTATAAGGGTGTGTAAACCTCTCTCTAGTAGACGCGTTTTAAAACCGTGAGGTTGATGGGGATACGTAACAGGCCAAAGTGGATCATGTCTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAAAGTTAGACACCGGGCAGTGTGCCAGCGAGGACAATGGAGCCCCCAAAATGGGTGGATTGTGAGATCCCACGTCGGTTGGAGAGAGAGGAACGAAACACTCCTTATAAGGGTGTGTAAACCTCTCTCTAGTAGACGCGTTTTAAAACCGTGAGGTTGATGGGGATACGTAACAGGCCAAAGTGGATCATGTCTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAAAGTTAGACACCGGGCAGTGTGCCAGCGAGGACAATGGAGCCCCCAAAATGGGTGGATTGTGAGATCCCACGTCGGTTGGAGAGAGAGGAACGAAACACTCCTTATAAGGGTGTGTAAACCTCTCTCTAGTAGACGCGTTTTAAAACCGTGAGGTTGATGGGGATACGTAACAGGCCAAAGTGGATCATGTCTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAAAGTTAGACACCGGGCAGTGTGCCAGCGAGGACAATGGAGCCCCCAAAATGGGTGGATTGTGAGATCCCACGTCGGTTGGAGAGAGAGGAACGAAACACTCCTTATAAGGGTGTGTAAACCTCTCTCTAGTAGACGCGTTTTAAAACCGTGAGGTTGATGGGGATACGTAACAGGCCAAAGTGGATCATGTCTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAAAGTTAGACACCGGGCAGTGTGCCAGCGAGGACAATGGAGCCCCCAAAATGGGTGGATTGTGAGATCCCACGTCGGTTGGAGAGAGAGGAACGAAGCACTCCTTNAGTAGACGCGTTTTAAAACCGTGAGGTTGATGGGGATACGTAACAGGCCAAAGTGGATCATGTCTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAAAGTTAGACACCGGGCAGTGTGCCAGCGAGGACAATGGAGCCCCCAAAATGGGTGGATTGTGAGATCCCACGTCGGTTGGAGAGAGAGGAACGAAGCACTCCTTATAAGGGTGTGTAAACCTCTCTCTAGTAGACGCGTTTTAAAGCTGTGAGGCTGATGGCGATACGTAACGGACCAAAGCGGACAATATCTACTAGCGGTGGGCTTGAGCTGTTACAAATGGCATCAGAGACAGACACCGGGCGGTGTTAAGGGGGATGGATTGTGAGATCCCACATCGGTTGGAGAGGGAGAACGAAACATTCTTTATAAAGGTGTGAAAAACCTCTCCCGAGTAGACGTATTTTAAAACCGTGAGGCTGACAGTGGTACGTAACGGGCCAAAGCAGACAATATCTGCTAGTGGTGGGCTTGGGCTATTACAAAAACGTTAGTTATCCGAGGTTTTGATCCTATGACCAACTGATCACCAGCGACTATTTAAAATCAAACTACAATTTCTAATCTCTAGCCACTAGGATTCTTCATGTTCATAGTCACTTGGTTATTCATGGATTATTCTTCACACTAGATTATTGTACTTCAGGTCTCCAGCTAGTTCACGAATCCGTGCTAAGATGCTCTATGCGACATCGAAGGACAGCTTTCGACACGATCTCAATGGCATACACTATGAGATTCAAGCTACCGACCCTGCAGAGATGGACCTGGATGTGATCAGAGACCGTGCTCAATGAACAGTCTCGGTTAGTTTAATTTGTTGTTCTCGTCGGGGTAAACCAGCTTGTATTTTGAATACTCATGAATCGGTTTATCCCCGTTTCGATATATGTAAAACCGATCCCTTGGCGAATGAAAACGTTGCACAAAACCGTAAAATAAACTAACATCTGTAGAATGCTGATATATGGTTGATCGACATGATGTTGATGTCTGGTTGCTATGGCTGCTTCTCAGATGTAGATATGTTTGTAATACAAAATGTTTAGATATCTATCGAACGTATTGTCATTGGTAACTTGTTCTCTGATGGATCTGTCTCAATATCTCTATTGCATTTTATGATGTGAAATGAAGAACACTACCTGTTACCGA

mRNA sequence

ATTTTTTTTAGTACAAAAAAAAAAAAAAAACTTTGAAAGTGAAGAATATTTCAGTTTGATTGTTTGGGAAATTGGGAGGATTAGCCATTGGGTCTCATTTCCTTTCCCTTTCTCTTCTTTCTATATCTTCTGCCTCTGGTTCTTGTGCCTACCATCTCTGATCTTTCTTCTCCTCCTCCCTTTGCTTAAGCTTCTTAATCGCCGCCGCTTCTCCGGTCATCATGTCGTTCAGAGGCCTCCGACGGCAAAACACTTTATCTGCAATGGGTGTGAATGAACACACCAAGAAAATATTTTCTGAGCTACAGAGAAAGAAAATGTATCGATACGTGATCTTTAAGGTCGATGAAAAGAAACGAGAGGTGGTGGTTGACAAGATTGGCAGTCCTGCAGAGAGCTATGAAGATTTCACTGCTGCTCTGCCCGACAACGATTGTCGTTACGCTGTCTATGATTTTGATTTCGTGACATCCGACAACTGCCAGAAGAGCAAGATATTTTTCATAGCATGGTCTCCAGCTAGTTCACGAATCCGTGCTAAGATGCTCTATGCGACATCGAAGGACAGCTTTCGACACGATCTCAATGGCATACACTATGAGATTCAAGCTACCGACCCTGCAGAGATGGACCTGGATGTGATCAGAGACCGTGCTCAATGAACAGTCTCGGTTAGTTTAATTTGTTGTTCTCGTCGGGGTAAACCAGCTTGTATTTTGAATACTCATGAATCGGTTTATCCCCGTTTCGATATATGTAAAACCGATCCCTTGGCGAATGAAAACGTTGCACAAAACCGTAAAATAAACTAACATCTGTAGAATGCTGATATATGGTTGATCGACATGATGTTGATGTCTGGTTGCTATGGCTGCTTCTCAGATGTAGATATGTTTGTAATACAAAATGTTTAGATATCTATCGAACGTATTGTCATTGGTAACTTGTTCTCTGATGGATCTGTCTCAATATCTCTATTGCATTTTATGATGTGAAATGAAGAACACTACCTGTTACCGA

Coding sequence (CDS)

ATGTCGTTCAGAGGCCTCCGACGGCAAAACACTTTATCTGCAATGGGTGTGAATGAACACACCAAGAAAATATTTTCTGAGCTACAGAGAAAGAAAATGTATCGATACGTGATCTTTAAGGTCGATGAAAAGAAACGAGAGGTGGTGGTTGACAAGATTGGCAGTCCTGCAGAGAGCTATGAAGATTTCACTGCTGCTCTGCCCGACAACGATTGTCGTTACGCTGTCTATGATTTTGATTTCGTGACATCCGACAACTGCCAGAAGAGCAAGATATTTTTCATAGCATGGTCTCCAGCTAGTTCACGAATCCGTGCTAAGATGCTCTATGCGACATCGAAGGACAGCTTTCGACACGATCTCAATGGCATACACTATGAGATTCAAGCTACCGACCCTGCAGAGATGGACCTGGATGTGATCAGAGACCGTGCTCAATGA

Protein sequence

MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESYEDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHDLNGIHYEIQATDPAEMDLDVIRDRAQ
Homology
[Close]
BLAST of Cp4.1LG15g00760 vs. ExPASy Swiss-Prot
Match: Q8SAG3 (Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 9.8e-58
Identity = 108/145 (74.48%), Postives = 128/145 (88.28%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY 60
           MSFRGL   N  S MGV +H+K  F EL+RKK++RYVIFK+DEKK+EVVV+K G PAES+
Sbjct: 1   MSFRGL---NASSGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESF 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD 120
           ++F AALP+NDCRYAVYDFDFVTS+NCQKSKIFFIAWSP SSRIRAKMLYATSK+ FR +
Sbjct: 61  DEFAAALPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRE 120

Query: 121 LNGIHYEIQATDPAEMDLDVIRDRA 146
           L+G+HYEIQATDP EMDL+V+R+RA
Sbjct: 121 LDGVHYEIQATDPTEMDLEVLRERA 142

[Close]
BLAST of Cp4.1LG15g00760 vs. ExPASy Swiss-Prot
Match: Q9ZSK2 (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 9.2e-56
Identity = 102/145 (70.34%), Postives = 123/145 (84.83%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY 60
           MSFRGL R N +S MGV + +K  F ELQRKK +RYV+FK+DE K+EVVV+K G+P ESY
Sbjct: 1   MSFRGLSRPNAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD 120
           +DF A+LPDNDCRYAVYDFDFVTS+NCQKSKIFF AWSP++S IRAK+LY+TSKD    +
Sbjct: 61  DDFLASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRE 120

Query: 121 LNGIHYEIQATDPAEMDLDVIRDRA 146
           L GIHYEIQATDP E+DL+V+R+RA
Sbjct: 121 LQGIHYEIQATDPTEVDLEVLRERA 145

[Close]
BLAST of Cp4.1LG15g00760 vs. ExPASy Swiss-Prot
Match: Q2QLT8 (Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF11 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.9e-49
Identity = 90/138 (65.22%), Postives = 117/138 (84.78%), Query Frame = 0 

Query: 8   RQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESYEDFTAAL 67
           R N  S +GV    K+ F ELQRKK +RYVIFK+D+K +EVVV+K GS  ES++DF  +L
Sbjct: 7   RANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSL 66

Query: 68  PDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHDLNGIHYE 127
           P++DCRYA+YDFDFVT +NCQKSKIFF+AWSP+ SRIRAKMLYATSK+ FR +L+G+HYE
Sbjct: 67  PESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYE 126

Query: 128 IQATDPAEMDLDVIRDRA 146
           IQATDP+E+D++++R+RA
Sbjct: 127 IQATDPSELDIELLRERA 144

[Close]
BLAST of Cp4.1LG15g00760 vs. ExPASy Swiss-Prot
Match: Q9AY76 (Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.2e-47
Identity = 89/136 (65.44%), Postives = 113/136 (83.09%), Query Frame = 0 

Query: 10  NTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESYEDFTAALPD 69
           N  S MGV    +  F ELQ KK +RYVIFK++EK+++VVV+K G+  ESY+DF A+LP+
Sbjct: 9   NASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPE 68

Query: 70  NDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHDLNGIHYEIQ 129
           NDCRYA+YDFDFVT +N QKSKIFFIAWSP++SRIRAKMLY+TSKD  + +L+G HYEIQ
Sbjct: 69  NDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQ 128

Query: 130 ATDPAEMDLDVIRDRA 146
           ATDP E+DL+V+R+RA
Sbjct: 129 ATDPTEVDLEVLRERA 144

[Close]
BLAST of Cp4.1LG15g00760 vs. ExPASy Swiss-Prot
Match: Q337A5 (Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF10 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 3.9e-46
Identity = 83/129 (64.34%), Postives = 112/129 (86.82%), Query Frame = 0 

Query: 17  VNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESYEDFTAALPDNDCRYAV 76
           V E +K  F EL+R+K++RYVIFK+D+++ E+VV+K G+P ESY+DFTA+LP +DCRYAV
Sbjct: 20  VPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLPADDCRYAV 79

Query: 77  YDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHDLNGIHYEIQATDPAEM 136
           YD DFV+ DNC+KSKIFFI+WSP+ SRIRAK +YA S++ FRH+L+G+H+EIQATDP +M
Sbjct: 80  YDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDM 139

Query: 137 DLDVIRDRA 146
           DL+V+R RA
Sbjct: 140 DLEVLRGRA 148

[Close]
BLAST of Cp4.1LG15g00760 vs. NCBI nr
Match: XP_022963942.1 (actin-depolymerizing factor-like [Cucurbita moschata] >XP_022967676.1 actin-depolymerizing factor-like [Cucurbita maxima] >XP_023553738.1 actin-depolymerizing factor-like [Cucurbita pepo subsp. pepo] >KAG6571521.1 Actin-depolymerizing factor 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011266.1 Actin-depolymerizing factor 6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 292 bits (747), Expect = 1.52e-99
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY 60
           MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY
Sbjct: 1   MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD 120
           EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD
Sbjct: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD 120

Query: 121 LNGIHYEIQATDPAEMDLDVIRDRAQ 146
           LNGIHYEIQATDPAEMDLDVIRDRAQ
Sbjct: 121 LNGIHYEIQATDPAEMDLDVIRDRAQ 146

[Close]
BLAST of Cp4.1LG15g00760 vs. NCBI nr
Match: XP_038888227.1 (actin-depolymerizing factor [Benincasa hispida])

HSP 1 Score: 284 bits (726), Expect = 2.43e-96
Identity = 141/146 (96.58%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY 60
           MSFRGLRRQNTLSAMGVNEHTKK FSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY
Sbjct: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD 120
           EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKD+FRH+
Sbjct: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120

Query: 121 LNGIHYEIQATDPAEMDLDVIRDRAQ 146
           L+GIHYEIQATDPAEMDL+VIRDRAQ
Sbjct: 121 LDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]
BLAST of Cp4.1LG15g00760 vs. NCBI nr
Match: XP_008447430.1 (PREDICTED: actin-depolymerizing factor [Cucumis melo] >XP_008447431.1 PREDICTED: actin-depolymerizing factor [Cucumis melo] >XP_022930980.1 actin-depolymerizing factor-like [Cucurbita moschata] >XP_022995915.1 actin-depolymerizing factor-like [Cucurbita maxima] >XP_023533852.1 actin-depolymerizing factor-like [Cucurbita pepo subsp. pepo] >KAG6606377.1 Actin-depolymerizing factor 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036318.1 Actin-depolymerizing factor 6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 283 bits (723), Expect = 6.97e-96
Identity = 140/146 (95.89%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY 60
           MSFRGLRRQNTLSAMGVNEHTKK FSELQRKKMYRYVIFKVDEKKREVVVDKIG+PAESY
Sbjct: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD 120
           EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKD+FRH+
Sbjct: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120

Query: 121 LNGIHYEIQATDPAEMDLDVIRDRAQ 146
           L+GIHYEIQATDPAEMDL+VIRDRAQ
Sbjct: 121 LDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]
BLAST of Cp4.1LG15g00760 vs. NCBI nr
Match: XP_004151983.1 (actin-depolymerizing factor [Cucumis sativus] >XP_011651442.1 actin-depolymerizing factor [Cucumis sativus] >KGN57913.1 hypothetical protein Csa_010146 [Cucumis sativus])

HSP 1 Score: 281 bits (720), Expect = 2.00e-95
Identity = 139/146 (95.21%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY 60
           MSFRGLRRQNTLSAMGVNEHTKK FSELQRKKMYRYVIF+VDEKKREVVVDKIG+PAESY
Sbjct: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD 120
           EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKD+FRH+
Sbjct: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120

Query: 121 LNGIHYEIQATDPAEMDLDVIRDRAQ 146
           L+GIHYEIQATDPAEMDL+VIRDRAQ
Sbjct: 121 LDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]
BLAST of Cp4.1LG15g00760 vs. NCBI nr
Match: XP_022145996.1 (actin-depolymerizing factor [Momordica charantia])

HSP 1 Score: 280 bits (717), Expect = 5.74e-95
Identity = 139/146 (95.21%), Postives = 144/146 (98.63%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY 60
           MSFRGLRRQNTLSAMGVNEHTKK FSELQRKKMYRYVIFKVDEKKREVVV+K GSPAESY
Sbjct: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVEKTGSPAESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD 120
           EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKD+FRH+
Sbjct: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120

Query: 121 LNGIHYEIQATDPAEMDLDVIRDRAQ 146
           L+GIHYEIQATDPAEMDL+VIRDRAQ
Sbjct: 121 LDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]
BLAST of Cp4.1LG15g00760 vs. ExPASy TrEMBL
Match: A0A6J1HST9 (actin-depolymerizing factor-like OS=Cucurbita maxima OX=3661 GN=LOC111467118 PE=3 SV=1)

HSP 1 Score: 292 bits (747), Expect = 7.38e-100
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY 60
           MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY
Sbjct: 1   MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD 120
           EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD
Sbjct: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD 120

Query: 121 LNGIHYEIQATDPAEMDLDVIRDRAQ 146
           LNGIHYEIQATDPAEMDLDVIRDRAQ
Sbjct: 121 LNGIHYEIQATDPAEMDLDVIRDRAQ 146

[Close]
BLAST of Cp4.1LG15g00760 vs. ExPASy TrEMBL
Match: A0A6J1HGI8 (actin-depolymerizing factor-like OS=Cucurbita moschata OX=3662 GN=LOC111464091 PE=3 SV=1)

HSP 1 Score: 292 bits (747), Expect = 7.38e-100
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY 60
           MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY
Sbjct: 1   MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD 120
           EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD
Sbjct: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD 120

Query: 121 LNGIHYEIQATDPAEMDLDVIRDRAQ 146
           LNGIHYEIQATDPAEMDLDVIRDRAQ
Sbjct: 121 LNGIHYEIQATDPAEMDLDVIRDRAQ 146

[Close]
BLAST of Cp4.1LG15g00760 vs. ExPASy TrEMBL
Match: A0A1S3BHG1 (actin-depolymerizing factor OS=Cucumis melo OX=3656 GN=LOC103489879 PE=3 SV=1)

HSP 1 Score: 283 bits (723), Expect = 3.38e-96
Identity = 140/146 (95.89%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY 60
           MSFRGLRRQNTLSAMGVNEHTKK FSELQRKKMYRYVIFKVDEKKREVVVDKIG+PAESY
Sbjct: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD 120
           EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKD+FRH+
Sbjct: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120

Query: 121 LNGIHYEIQATDPAEMDLDVIRDRAQ 146
           L+GIHYEIQATDPAEMDL+VIRDRAQ
Sbjct: 121 LDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]
BLAST of Cp4.1LG15g00760 vs. ExPASy TrEMBL
Match: A0A6J1K588 (actin-depolymerizing factor-like OS=Cucurbita maxima OX=3661 GN=LOC111491296 PE=3 SV=1)

HSP 1 Score: 283 bits (723), Expect = 3.38e-96
Identity = 140/146 (95.89%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY 60
           MSFRGLRRQNTLSAMGVNEHTKK FSELQRKKMYRYVIFKVDEKKREVVVDKIG+PAESY
Sbjct: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD 120
           EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKD+FRH+
Sbjct: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120

Query: 121 LNGIHYEIQATDPAEMDLDVIRDRAQ 146
           L+GIHYEIQATDPAEMDL+VIRDRAQ
Sbjct: 121 LDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]
BLAST of Cp4.1LG15g00760 vs. ExPASy TrEMBL
Match: A0A6J1EY99 (actin-depolymerizing factor-like OS=Cucurbita moschata OX=3662 GN=LOC111437311 PE=3 SV=1)

HSP 1 Score: 283 bits (723), Expect = 3.38e-96
Identity = 140/146 (95.89%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY 60
           MSFRGLRRQNTLSAMGVNEHTKK FSELQRKKMYRYVIFKVDEKKREVVVDKIG+PAESY
Sbjct: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD 120
           EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKD+FRH+
Sbjct: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120

Query: 121 LNGIHYEIQATDPAEMDLDVIRDRAQ 146
           L+GIHYEIQATDPAEMDL+VIRDRAQ
Sbjct: 121 LDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]
BLAST of Cp4.1LG15g00760 vs. TAIR 10
Match: AT2G31200.1 (actin depolymerizing factor 6 )

HSP 1 Score: 217.6 bits (553), Expect = 6.5e-57
Identity = 102/145 (70.34%), Postives = 123/145 (84.83%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY 60
           MSFRGL R N +S MGV + +K  F ELQRKK +RYV+FK+DE K+EVVV+K G+P ESY
Sbjct: 1   MSFRGLSRPNAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD 120
           +DF A+LPDNDCRYAVYDFDFVTS+NCQKSKIFF AWSP++S IRAK+LY+TSKD    +
Sbjct: 61  DDFLASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRE 120

Query: 121 LNGIHYEIQATDPAEMDLDVIRDRA 146
           L GIHYEIQATDP E+DL+V+R+RA
Sbjct: 121 LQGIHYEIQATDPTEVDLEVLRERA 145

[Close]
BLAST of Cp4.1LG15g00760 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 183.0 bits (463), Expect = 1.8e-46
Identity = 80/135 (59.26%), Postives = 112/135 (82.96%), Query Frame = 0 

Query: 10  NTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESYEDFTAALPD 69
           N+ S M VN+  K  F EL+ K+ YR+++FK+DEK ++V ++K+G+P E+Y+DFT+++PD
Sbjct: 3   NSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPD 62

Query: 70  NDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHDLNGIHYEIQ 129
           ++CRYAVYDFDF T DNCQKSKIFFIAWSP +SR+R+KMLYA+SKD F+ ++ GI  E+Q
Sbjct: 63  DECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQ 122

Query: 130 ATDPAEMDLDVIRDR 145
           ATDP+EM LD+I+ R
Sbjct: 123 ATDPSEMSLDIIKGR 137

[Close]
BLAST of Cp4.1LG15g00760 vs. TAIR 10
Match: AT1G01750.1 (actin depolymerizing factor 11 )

HSP 1 Score: 180.6 bits (457), Expect = 8.8e-46
Identity = 79/135 (58.52%), Postives = 113/135 (83.70%), Query Frame = 0 

Query: 10  NTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESYEDFTAALPD 69
           N+ S M V++  K  F EL+ K+ YR+++FK+DEK ++V++DK+G+P E+YEDFT ++P+
Sbjct: 3   NSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPE 62

Query: 70  NDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHDLNGIHYEIQ 129
           ++CRYAVYD+DF T +NCQKSKIFFIAWSP +SR+R+KMLYA+SKD F+ +L+GI  E+Q
Sbjct: 63  DECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQ 122

Query: 130 ATDPAEMDLDVIRDR 145
           ATDP+EM LD+I+ R
Sbjct: 123 ATDPSEMSLDIIKGR 137

[Close]
BLAST of Cp4.1LG15g00760 vs. TAIR 10
Match: AT3G46010.2 (actin depolymerizing factor 1 )

HSP 1 Score: 175.6 bits (444), Expect = 2.8e-44
Identity = 77/139 (55.40%), Postives = 111/139 (79.86%), Query Frame = 0 

Query: 7   RRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESYEDFTAA 66
           R  N  S M V++  K  F EL+ K+ +R++++K++EK+++VVV+K+G P ++YE+F A 
Sbjct: 11  RSANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAAC 70

Query: 67  LPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHDLNGIHY 126
           LP ++CRYA+YDFDFVT++NCQKSKIFFIAW P  +++R+KM+YA+SKD F+ +L+GI  
Sbjct: 71  LPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQV 130

Query: 127 EIQATDPAEMDLDVIRDRA 146
           E+QATDP EMDLDV R RA
Sbjct: 131 ELQATDPTEMDLDVFRSRA 149

[Close]
BLAST of Cp4.1LG15g00760 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 174.9 bits (442), Expect = 4.8e-44
Identity = 76/136 (55.88%), Postives = 110/136 (80.88%), Query Frame = 0 

Query: 10  NTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESYEDFTAALPD 69
           N  S M V++  K  F EL+ K+ +R++++K++EK+++VVV+K+G P ++YE+F A LP 
Sbjct: 3   NAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPA 62

Query: 70  NDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHDLNGIHYEIQ 129
           ++CRYA+YDFDFVT++NCQKSKIFFIAW P  +++R+KM+YA+SKD F+ +L+GI  E+Q
Sbjct: 63  DECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQ 122

Query: 130 ATDPAEMDLDVIRDRA 146
           ATDP EMDLDV R RA
Sbjct: 123 ATDPTEMDLDVFRSRA 138

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g00760 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8SAG39.8e-5874.48Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1[more]
Q9ZSK29.2e-5670.34Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1[more]
Q2QLT82.9e-4965.22Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF11... [more]
Q9AY761.2e-4765.44Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF2 P... [more]
Q337A53.9e-4664.34Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF10... [more]
BLAST of Cp4.1LG15g00760 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022963942.11.52e-99100.00actin-depolymerizing factor-like [Cucurbita moschata] >XP_022967676.1 actin-depo... [more]
XP_038888227.12.43e-9696.58actin-depolymerizing factor [Benincasa hispida][more]
XP_008447430.16.97e-9695.89PREDICTED: actin-depolymerizing factor [Cucumis melo] >XP_008447431.1 PREDICTED:... [more]
XP_004151983.12.00e-9595.21actin-depolymerizing factor [Cucumis sativus] >XP_011651442.1 actin-depolymerizi... [more]
XP_022145996.15.74e-9595.21actin-depolymerizing factor [Momordica charantia][more]
BLAST of Cp4.1LG15g00760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HST97.38e-100100.00actin-depolymerizing factor-like OS=Cucurbita maxima OX=3661 GN=LOC111467118 PE=... [more]
A0A6J1HGI87.38e-100100.00actin-depolymerizing factor-like OS=Cucurbita moschata OX=3662 GN=LOC111464091 P... [more]
A0A1S3BHG13.38e-9695.89actin-depolymerizing factor OS=Cucumis melo OX=3656 GN=LOC103489879 PE=3 SV=1[more]
A0A6J1K5883.38e-9695.89actin-depolymerizing factor-like OS=Cucurbita maxima OX=3661 GN=LOC111491296 PE=... [more]
A0A6J1EY993.38e-9695.89actin-depolymerizing factor-like OS=Cucurbita moschata OX=3662 GN=LOC111437311 P... [more]
BLAST of Cp4.1LG15g00760 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G31200.16.5e-5770.34actin depolymerizing factor 6 [more]
AT4G00680.11.8e-4659.26actin depolymerizing factor 8 [more]
AT1G01750.18.8e-4658.52actin depolymerizing factor 11 [more]
AT3G46010.22.8e-4455.40actin depolymerizing factor 1 [more]
AT3G46010.14.8e-4455.88actin depolymerizing factor 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 19..146
e-value: 7.5E-52
score: 188.3
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 22..143
e-value: 2.9E-37
score: 127.2
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 13..146
score: 38.559761
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10Severincoord: 5..146
e-value: 1.1E-49
score: 170.3
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 1..146
IPR017904ADF/CofilinCDDcd11286ADF_cofilin_likecoord: 13..145
e-value: 1.21518E-60
score: 181.601
NoneNo IPR availablePANTHERPTHR11913:SF96COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEINcoord: 1..146
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 10..144

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g00760.1Cp4.1LG15g00760.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005737 cytoplasm
molecular_function GO:0051015 actin filament binding
molecular_function GO:0003779 actin binding