Cp4.1LG14g10530 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG14g10530
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionPhosphoinositide phosphatase family protein isoform 1
LocationCp4.1LG14: 8864711 .. 8864938 (-)
RNA-Seq ExpressionCp4.1LG14g10530
SyntenyCp4.1LG14g10530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGCGAACCGGTATGGTTCCTCAAACGCAAGCTGATCTTCGCTATGCTAAGGCTTCGCAAGCCATCGAGGCTAGAGGTTATGGAGGTTCCCTCCGACGTGCCGACCAGCTTCGATGCTCGGTCGGGAGCCGTGGTTAAAGGGTCGCGAAAAACAAACATGGTGCCGAATGGGGTGGTGGTTTGGCTCACTCCTGGGCCAGCCACCCCCGGCACGATGAAGTAG

mRNA sequence

ATGGAGAGCGAACCGGTATGGTTCCTCAAACGCAAGCTGATCTTCGCTATGCTAAGGCTTCGCAAGCCATCGAGGCTAGAGGTTATGGAGGTTCCCTCCGACGTGCCGACCAGCTTCGATGCTCGGTCGGGAGCCGTGGTTAAAGGGTCGCGAAAAACAAACATGGTGCCGAATGGGGTGGTGGTTTGGCTCACTCCTGGGCCAGCCACCCCCGGCACGATGAAGTAG

Coding sequence (CDS)

ATGGAGAGCGAACCGGTATGGTTCCTCAAACGCAAGCTGATCTTCGCTATGCTAAGGCTTCGCAAGCCATCGAGGCTAGAGGTTATGGAGGTTCCCTCCGACGTGCCGACCAGCTTCGATGCTCGGTCGGGAGCCGTGGTTAAAGGGTCGCGAAAAACAAACATGGTGCCGAATGGGGTGGTGGTTTGGCTCACTCCTGGGCCAGCCACCCCCGGCACGATGAAGTAG

Protein sequence

MESEPVWFLKRKLIFAMLRLRKPSRLEVMEVPSDVPTSFDARSGAVVKGSRKTNMVPNGVVVWLTPGPATPGTMK
Homology
[Close]
BLAST of Cp4.1LG14g10530 vs. NCBI nr
Match: KGN55603.1 (hypothetical protein Csa_010713 [Cucumis sativus])

HSP 1 Score: 121 bits (304), Expect = 3.21e-34
Identity = 60/75 (80.00%), Postives = 63/75 (84.00%), Query Frame = 0 

Query: 1  MESEPVWFLKRKLIFAMLRLRKPSRLEVMEVPSDVPTSFDARSGAVVKGSRKTNMVPNGV 60
          ME EPVW LKRK+I AML L KPS+LEVMEVPSDVPT F+ARS  VVKGS K  MVPNGV
Sbjct: 1  MEREPVWCLKRKVILAMLMLCKPSKLEVMEVPSDVPTRFEARSAPVVKGSWKAKMVPNGV 60

Query: 61 VVWLTPGPATPGTMK 75
          VVWLTPGP TPGTMK
Sbjct: 61 VVWLTPGPTTPGTMK 75

[Close]
BLAST of Cp4.1LG14g10530 vs. NCBI nr
Match: EOX90672.1 (Phosphoinositide phosphatase family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 69.7 bits (169), Expect = 1.05e-11
Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = 0 

Query: 14  IFAMLRLRKPSRLEVMEVPSDVPTSFDARSGAVVKGSRKTNMVPNGVVVWLTPGPATPGT 73
           I A   LR PS+ EVME+PS +PT+F+ R    V GS KTNMVP GVVV L PGPATP T
Sbjct: 645 ILATDMLRSPSKPEVMELPSAMPTTFEDRFAVTVMGSWKTNMVPKGVVVSLIPGPATPLT 704

[Close]
BLAST of Cp4.1LG14g10530 vs. NCBI nr
Match: ERN00566.1 (hypothetical protein AMTR_s00102p00122440 [Amborella trichopoda])

HSP 1 Score: 62.4 bits (150), Expect = 1.54e-10
Identity = 33/52 (63.46%), Postives = 36/52 (69.23%), Query Frame = 0 

Query: 14 IFAMLRLRKPSRLEVMEVPSDVPTSFDARSGAVVKGSRKTNMVPNGVVVWLT 65
          I A+  LR+PSR EVMEV SD PT+FD      VK SRKTN VP GVVVW T
Sbjct: 36 IMAIEMLRRPSRAEVMEVLSDKPTTFDEALPHSVKWSRKTNTVPKGVVVWWT 87

[Close]
BLAST of Cp4.1LG14g10530 vs. ExPASy TrEMBL
Match: A0A0A0L1J0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G001750 PE=4 SV=1)

HSP 1 Score: 121 bits (304), Expect = 1.56e-34
Identity = 60/75 (80.00%), Postives = 63/75 (84.00%), Query Frame = 0 

Query: 1  MESEPVWFLKRKLIFAMLRLRKPSRLEVMEVPSDVPTSFDARSGAVVKGSRKTNMVPNGV 60
          ME EPVW LKRK+I AML L KPS+LEVMEVPSDVPT F+ARS  VVKGS K  MVPNGV
Sbjct: 1  MEREPVWCLKRKVILAMLMLCKPSKLEVMEVPSDVPTRFEARSAPVVKGSWKAKMVPNGV 60

Query: 61 VVWLTPGPATPGTMK 75
          VVWLTPGP TPGTMK
Sbjct: 61 VVWLTPGPTTPGTMK 75

[Close]
BLAST of Cp4.1LG14g10530 vs. ExPASy TrEMBL
Match: A0A061DFI0 (Phosphoinositide phosphatase family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_000073 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.10e-12
Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = 0 

Query: 14  IFAMLRLRKPSRLEVMEVPSDVPTSFDARSGAVVKGSRKTNMVPNGVVVWLTPGPATPGT 73
           I A   LR PS+ EVME+PS +PT+F+ R    V GS KTNMVP GVVV L PGPATP T
Sbjct: 645 ILATDMLRSPSKPEVMELPSAMPTTFEDRFAVTVMGSWKTNMVPKGVVVSLIPGPATPLT 704

[Close]
BLAST of Cp4.1LG14g10530 vs. ExPASy TrEMBL
Match: W1NZ28 (Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s00102p00122440 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 7.46e-11
Identity = 33/52 (63.46%), Postives = 36/52 (69.23%), Query Frame = 0 

Query: 14 IFAMLRLRKPSRLEVMEVPSDVPTSFDARSGAVVKGSRKTNMVPNGVVVWLT 65
          I A+  LR+PSR EVMEV SD PT+FD      VK SRKTN VP GVVVW T
Sbjct: 36 IMAIEMLRRPSRAEVMEVLSDKPTTFDEALPHSVKWSRKTNTVPKGVVVWWT 87

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g10530 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG14g10530 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55603.13.21e-3480.00hypothetical protein Csa_010713 [Cucumis sativus][more]
EOX90672.11.05e-1161.67Phosphoinositide phosphatase family protein isoform 1 [Theobroma cacao][more]
ERN00566.11.54e-1063.46hypothetical protein AMTR_s00102p00122440 [Amborella trichopoda][more]
BLAST of Cp4.1LG14g10530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1J01.56e-3480.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G001750 PE=4 SV=1[more]
A0A061DFI05.10e-1261.67Phosphoinositide phosphatase family protein isoform 1 OS=Theobroma cacao OX=3641... [more]
W1NZ287.46e-1163.46Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s00102p00122440... [more]
BLAST of Cp4.1LG14g10530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g10530.1Cp4.1LG14g10530.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046856 phosphatidylinositol dephosphorylation
cellular_component GO:0005783 endoplasmic reticulum
molecular_function GO:0043812 phosphatidylinositol-4-phosphate phosphatase activity