Cp4.1LG14g10160 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCGACTAGTCGTAGGGCTTGTTTTTTCTCCTCCTTCAAGGATACTGTTGAGCTAATAGATCGAGTCCCTTCACTTTAGGGTTCGCATAGTTGGGGTTTTTCAGTGGCCCTTCGCGGTCAGAGGATAGTAATTTCATGATAACCGTTTTGCAGCTGCTTTCAAAATGGGGAGATGTTTAGTGAATCGAAAATTATGATAAATTTTTATAGAAAAGCAAGACCCAAGTAGGGTTTTTGTGACATTGTTAAAAATTGAAATGGTATTTTGACAGTTTGGAGAGTTAGTACTTATTGAGTTTATGTACAGAACGATCAACTATTTGCCAGTTCTCTTTTGTATTGAATTGTTGGAAAATATGGATTTAAGACCTCCAAGTTATTTAGGAAGTGAAAAGAAGATAATGGATTCAGCTCAGAATGCATCTTCTGCTGCCGGAACTGGTGGAAGTGGTGGGAATGGATCAGTCATCAATGATACTTCAGCATCAACTACTGTGGATGATTCAAAGCAAAACTTGAACCAAGTAATCAATTCCATACAGAAAACTTTGGGTATCCTCCATCAGCTCAACCTCACCGTTTCTAACTTCAATGCTGCCTATCAGCTGCCTCTTTTACAACGCCTGTACGTCCAGTTTTGCTTCATCTAATGTCTGATTCGTTCATTATTCACTACTTGTTCCACTCTTTATCAGTGATATGTTTTTGGATTTTGCAGTAATTCTCTCGTTTTGGAGCTAGATAACATGGTTAAATTATCAGAGAAGTGCACCATCCAGGTCCCTATGGAGGTTGTTAAGTGAGTCTTTGTACACCTATTCTGGTTTCTAGCTTTGCAAGCGTAATTTTTATATTATTATTATTTTTTAACTCTTCTATTCTTCTTGGCCCATTTCTTACTTTTCTTTTGATTAGCTTGATTGATGATGGGAAGAATCCAGATGAATTCACGAGGGATGTCTTAAATAGTTGCATTGCAAAAAATCAAAGTACAAAAGGCAAAACTGATGCCTTCAAGGTAGTCTTTACATCTCTATGGGGCATACTGTTAAAAATCTACTTATATCTTTTTTTTTCTTTTATCTTGATTCCAAAGATTCAAGAAAATATTTATTGAATGTTGTACTGCTTACCATATTCAGGGCTTACGGAAGCATCTTTTGGAGGAGCTTGAACAGACATTTCCTGATGAAGTCGAGTCTTATAGAGAAATTCGTGCTGCTTCTGCTGCCGTGAGTTGAAATTTCTTTCCTGCTGTCAATTTTATCTCTACCTTCAAATTTTTCTATATATATAATTCATTTCAAACTGATCAAAATATTTTCTACACTTTTATGGTTTAATTTTTTACTTTATCTATAGCCATAAGCTATATGTATTTTCAAAGTTCGCCTCATCCTTACACAAGCATTTCTTGGCCATTTATATCTTTTTGGTGGTTTTGGATATAACATCAGAGATGTGAAAAATGTAAACTATGTTATGGTGTCAGTTCTAGGTATAGTAGGAGGATGTTCATTACCTTAATTTTATTGTATGTTAAGTTATTAAGACTCACTTACACTTTAGACTGTTCTACTACACGTAGGAGTGGTTTTAATATAAGATATTGGACAAGTTCTGTTCTGTTATTTTGAGCTTGGTTGCAGGTTATGGTTACTTTGTTGTATGGTTTACGTTGGTTTTTTCTTAGTGTCAAAAATAAGAGGAAACAAGTAGCATGTTTGTTTTATGATTCATAGGTTGATTGAATTCTGCTTGCTTAAAAATTACTTTCTGGTCATTTTTTAAACATCTCTCAAGCCAATTTTACCTCAAAAATATTTTCCTTTATGAATAAAATGGCTTAATGAATTTAGAATCAGACTAAACTATTTTATTTTCTAGTTTGTTGAGCAAAGTTTTATAATTAGCTTTTATGAAGTAAAGAACTTGGAGTACTTACTGCCTCTAATTGTATAACCATCTTTCCACTTTCGGTGCATAGTAAATATTTTGTGATATCAAGGTTTGTTGTTCACATGCCCCAGTGGAAATTAGGGTACTGAGTTTTTTTTATTACTTGGTAGTAGTTTTAAGTTTCACTATTCATGTCGGTGCCTTAGCTAAGTGTTATTGTATCATTGCTCCTTTCAAGTGAATTAAACTTATATTGTATAAGGACATTAGAACGAGCATGAGTCCTGTCCTTGTGACTTAGATACCAAAAATTTGATCGGAGCTGAAATTTTAATGCAATATCAGTGGAATACACAAGATATAACCTCTTACGGGCACAAAAATTTCCCAACTATGTATACATACGACATCCATCTTGCTTTAGATAAGAGGTTCTTCTGCAATCATTGCTTAAATATCTTCTGCTAGAGGGGAACCATAGAATCCAATTGTCAAGTCCTTTCCTGTCTTCAAGTAAGTTGGCCTTTCAATTTTTCACCATGGATTGGTGGCTTTCTTGATAAATGTCAGCAAGAGGTGTAGAATTAATTCATGCCCATAAGAGTTCAGTTCATCTTCGCCCATCTTTTTCTGTTTGTGTCCTTTGATTGTGCTGTCTAGTTGAATTGTTTGATTTCTCCCATTCCACTATCAATCCAACCCGTAATATTGGTAAAATGTAGAACATGTAGCGTTATCAGGTATGAGGGCTCTAGCCTCATTGGAGGAGGGAAATTAAGCTTGAGTGATGCAAGGTGTCTTTACAAAGGTGCTAAAACTTCGACCCCCCATCCATAAATGCAAGTCCCAAAATGAGATCATATGATTCTAGCCACCATTGTCAGATGATTTTGGTCTCTGTGGAATCGGTCCGAGTATTGGCTTGATTTGCGTGCTACTTTTGCCCATACGTTTGAGCTATATTTCCTATTTCCCGGATCATTTTCTGAGATCAAATGGCTGGATATCAATTTGATTGAAATTTGATGGGAAATAAACCTGGATTGCTATATTAAAATATGTGGGTGATAACCTTTTTAGACGACTGTTCCTTTCCTTCAACATTTACTAACAAACTCATCATCTTATAGCTTTGTGCCCATAGCATGTATGAGTATGGGAAACCAAAAACTTCCTACTTTTTTTGGAGAGCGAGTGAATCAATTATAACTATAAAAGACATAAGGATATACTATATCGAAAACTCTTGTTTTTTATTTTTTCTTTTACGAATTTTCACTTATTCATCAACATTTCCGTACAAGTACATCGTTCATTATGTTTTTGTGTTATTGCGTTTGAATTTTAATCTCGTTTCAACAAATGCAGGAATCAAAAAGGATAGCGCAATCACAAAGTATGTTGCCAAATGGGGACATGAAGGTTAAGATGGAGATTTAAGTGCTTTCTGCGTTGATTATCAGGTTTTTGAATTTCTTCTCTACTGTTATTCTTTATTGATTGATTGGCCAGCATATATCACACGATTTTTAGTTTCATTCAATGGATTGACAATGGAATAACATAACCCTTCTTTATAAACGTGTGTAAAACAGAATAACATCATCCTCTATTCTATTACTGTCTATAATCTTCTAGGGAGAGGCGTTTCGTATGCTACAATGTGACGACTTATTGAGGAGAAGATGGTTATATTTTGTGTTGCTGATCTGTATCCATCATTTTAGTACTTTGATTTCGAGTTTCTTGAGCATATAGAAATCCGTGTTTCAGTGCTTTCAGAATTGTGAAAAGAGATTTATACTCAAATAGGAGTTTGATATCTATTATGGTTACTCAACTCAATAGTATGCGTCTTTCTGGAAAGTCAAATGTTTGAATCTCTATTATGAATAATGTTTGAATCTCTATTATGACAGGGAATTCGTTCTTATTTTATACCCAATTAAGTTGAAAAGACCTTTTCAGGATCGATTTTTCTCGCTCGAAATAGGTGAGGTGGGCTGTATCTTGGTTTCTCTAGTGGGGAGACAACGTGGGATTTGATGGCGGCTAATGAAGTTATACTGCAAAAGCCACACACAAGATAAAGATTTAATGGCCCTGGCCCTATTCGTATTCGTATTCGTATTCGTTTTCGTATTCGTATTGATTGGGCCAATCAAGGCGGAGAAGAATCACAATCCTCAAATGTTGAACTTTTGATTTTACTGGGCTCAACCCCTTCTGTTTGTTTGATTCAAGTTTTATTTTATATTTTTACTTGGTATGTGAATCTTTTCTTAACTGGATTCTCACTTTTCTGTTAATAAGCATTGTAAATTCGTGTACTATT TTTCGACTAGTCGTAGGGCTTGTTTTTTCTCCTCCTTCAAGGATACTGTTGAGCTAATAGATCGAGTCCCTTCACTTTAGGGTTCGCATAGTTGGGGTTTTTCAGTGGCCCTTCGCGGTCAGAGGATAGTAATTTCATGATAACCGTTTTGCAGCTGCTTTCAAAATGGGGAGATGTTTAGTGAATCGAAAATTATGATAAATTTTTATAGAAAAGCAAGACCCAAGTAGGGTTTTTGTGACATTGTTAAAAATTGAAATGGTATTTTGACAGTTTGGAGAGTTAGTACTTATTGAGTTTATGTACAGAACGATCAACTATTTGCCAGTTCTCTTTTGTATTGAATTGTTGGAAAATATGGATTTAAGACCTCCAAGTTATTTAGGAAGTGAAAAGAAGATAATGGATTCAGCTCAGAATGCATCTTCTGCTGCCGGAACTGGTGGAAGTGGTGGGAATGGATCAGTCATCAATGATACTTCAGCATCAACTACTGTGGATGATTCAAAGCAAAACTTGAACCAAGTAATCAATTCCATACAGAAAACTTTGGGTATCCTCCATCAGCTCAACCTCACCGTTTCTAACTTCAATGCTGCCTATCAGCTGCCTCTTTTACAACGCCTTAATTCTCTCGTTTTGGAGCTAGATAACATGGTTAAATTATCAGAGAAGTGCACCATCCAGGTCCCTATGGAGGTTGTTAACTTGATTGATGATGGGAAGAATCCAGATGAATTCACGAGGGATGTCTTAAATAGTTGCATTGCAAAAAATCAAAGTACAAAAGGCAAAACTGATGCCTTCAAGGGCTTACGGAAGCATCTTTTGGAGGAGCTTGAACAGACATTTCCTGATGAAGTCGAGTCTTATAGAGAAATTCGTGCTGCTTCTGCTGCCGAATCAAAAAGGATAGCGCAATCACAAAGTATGTTGCCAAATGGGGACATGAAGGTTAAGATGGAGATTTAAGTGCTTTCTGCGTTGATTATCAGGGAATTCGTTCTTATTTTATACCCAATTAAGTTGAAAAGACCTTTTCAGGATCGATTTTTCTCGCTCGAAATAGGTGAGGTGGGCTGTATCTTGGTTTCTCTAGTGGGGAGACAACGTGGGATTTGATGGCGGCTAATGAAGTTATACTGCAAAAGCCACACACAAGATAAAGATTTAATGGCCCTGGCCCTATTCGTATTCGTATTCGTATTCGTTTTCGTATTCGTATTGATTGGGCCAATCAAGGCGGAGAAGAATCACAATCCTCAAATGTTGAACTTTTGATTTTACTGGGCTCAACCCCTTCTGTTTGTTTGATTCAAGTTTTATTTTATATTTTTACTTGGTATGTGAATCTTTTCTTAACTGGATTCTCACTTTTCTGTTAATAAGCATTGTAAATTCGTGTACTATT ATGTACAGAACGATCAACTATTTGCCAGTTCTCTTTTGTATTGAATTGTTGGAAAATATGGATTTAAGACCTCCAAGTTATTTAGGAAGTGAAAAGAAGATAATGGATTCAGCTCAGAATGCATCTTCTGCTGCCGGAACTGGTGGAAGTGGTGGGAATGGATCAGTCATCAATGATACTTCAGCATCAACTACTGTGGATGATTCAAAGCAAAACTTGAACCAAGTAATCAATTCCATACAGAAAACTTTGGGTATCCTCCATCAGCTCAACCTCACCGTTTCTAACTTCAATGCTGCCTATCAGCTGCCTCTTTTACAACGCCTTAATTCTCTCGTTTTGGAGCTAGATAACATGGTTAAATTATCAGAGAAGTGCACCATCCAGGTCCCTATGGAGGTTGTTAACTTGATTGATGATGGGAAGAATCCAGATGAATTCACGAGGGATGTCTTAAATAGTTGCATTGCAAAAAATCAAAGTACAAAAGGCAAAACTGATGCCTTCAAGGGCTTACGGAAGCATCTTTTGGAGGAGCTTGAACAGACATTTCCTGATGAAGTCGAGTCTTATAGAGAAATTCGTGCTGCTTCTGCTGCCGAATCAAAAAGGATAGCGCAATCACAAAGTATGTTGCCAAATGGGGACATGAAGGTTAAGATGGAGATTTAA MYRTINYLPVLFCIELLENMDLRPPSYLGSEKKIMDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTVSNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQSMLPNGDMKVKMEI Homology
BLAST of Cp4.1LG14g10160 vs. ExPASy Swiss-Prot
Match: F4HPA7 (Mediator of RNA polymerase II transcription subunit 10b OS=Arabidopsis thaliana OX=3702 GN=MED10B PE=1 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 7.9e-67 Identity = 142/193 (73.58%), Postives = 163/193 (84.46%), Query Frame = 0
BLAST of Cp4.1LG14g10160 vs. ExPASy Swiss-Prot
Match: Q9FHZ2 (Mediator of RNA polymerase II transcription subunit 10a OS=Arabidopsis thaliana OX=3702 GN=MED10A PE=1 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 7.7e-62 Identity = 133/190 (70.00%), Postives = 156/190 (82.11%), Query Frame = 0
BLAST of Cp4.1LG14g10160 vs. ExPASy Swiss-Prot
Match: Q16G71 (Mediator of RNA polymerase II transcription subunit 10 OS=Aedes aegypti OX=7159 GN=MED10 PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.9e-16 Identity = 42/123 (34.15%), Postives = 75/123 (60.98%), Query Frame = 0
BLAST of Cp4.1LG14g10160 vs. ExPASy Swiss-Prot
Match: Q7Q5R5 (Mediator of RNA polymerase II transcription subunit 10 OS=Anopheles gambiae OX=7165 GN=MED10 PE=3 SV=2) HSP 1 Score: 85.9 bits (211), Expect = 6.4e-16 Identity = 42/123 (34.15%), Postives = 74/123 (60.16%), Query Frame = 0
BLAST of Cp4.1LG14g10160 vs. ExPASy Swiss-Prot
Match: Q9CXU0 (Mediator of RNA polymerase II transcription subunit 10 OS=Mus musculus OX=10090 GN=Med10 PE=1 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.0e-14 Identity = 43/117 (36.75%), Postives = 70/117 (59.83%), Query Frame = 0
BLAST of Cp4.1LG14g10160 vs. NCBI nr
Match: XP_022923485.1 (mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923486.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923487.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923488.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923489.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923491.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923492.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022965379.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965380.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965381.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965383.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965384.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965385.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965386.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_023553208.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553209.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553210.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553211.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553212.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 350 bits (899), Expect = 1.02e-120 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0
BLAST of Cp4.1LG14g10160 vs. NCBI nr
Match: XP_008448559.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [Cucumis melo] >XP_008448560.1 PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [Cucumis melo] >XP_008448561.1 PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [Cucumis melo]) HSP 1 Score: 343 bits (879), Expect = 1.14e-117 Identity = 183/189 (96.83%), Postives = 187/189 (98.94%), Query Frame = 0
BLAST of Cp4.1LG14g10160 vs. NCBI nr
Match: XP_038876576.1 (mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida] >XP_038876578.1 mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida] >XP_038876579.1 mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida] >XP_038876580.1 mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida]) HSP 1 Score: 342 bits (878), Expect = 1.62e-117 Identity = 183/189 (96.83%), Postives = 187/189 (98.94%), Query Frame = 0
BLAST of Cp4.1LG14g10160 vs. NCBI nr
Match: XP_004146135.1 (mediator of RNA polymerase II transcription subunit 10b [Cucumis sativus] >XP_031739316.1 mediator of RNA polymerase II transcription subunit 10b [Cucumis sativus] >KAE8650007.1 hypothetical protein Csa_009833 [Cucumis sativus]) HSP 1 Score: 341 bits (874), Expect = 6.58e-117 Identity = 182/189 (96.30%), Postives = 186/189 (98.41%), Query Frame = 0
BLAST of Cp4.1LG14g10160 vs. NCBI nr
Match: XP_022145303.1 (mediator of RNA polymerase II transcription subunit 10b-like [Momordica charantia] >XP_022145304.1 mediator of RNA polymerase II transcription subunit 10b-like [Momordica charantia] >XP_022145305.1 mediator of RNA polymerase II transcription subunit 10b-like [Momordica charantia] >XP_022145306.1 mediator of RNA polymerase II transcription subunit 10b-like [Momordica charantia]) HSP 1 Score: 339 bits (869), Expect = 3.80e-116 Identity = 179/189 (94.71%), Postives = 187/189 (98.94%), Query Frame = 0
BLAST of Cp4.1LG14g10160 vs. ExPASy TrEMBL
Match: A0A6J1HLJ2 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita maxima OX=3661 GN=LOC111465259 PE=3 SV=1) HSP 1 Score: 350 bits (899), Expect = 4.94e-121 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0
BLAST of Cp4.1LG14g10160 vs. ExPASy TrEMBL
Match: A0A6J1E6X8 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita moschata OX=3662 GN=LOC111431167 PE=3 SV=1) HSP 1 Score: 350 bits (899), Expect = 4.94e-121 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0
BLAST of Cp4.1LG14g10160 vs. ExPASy TrEMBL
Match: A0A0A0L3Q2 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis sativus OX=3659 GN=MED10 PE=3 SV=1) HSP 1 Score: 352 bits (902), Expect = 1.43e-120 Identity = 188/206 (91.26%), Postives = 196/206 (95.15%), Query Frame = 0
BLAST of Cp4.1LG14g10160 vs. ExPASy TrEMBL
Match: A0A1S3BJY3 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis melo OX=3656 GN=LOC103490703 PE=3 SV=1) HSP 1 Score: 343 bits (879), Expect = 5.51e-118 Identity = 183/189 (96.83%), Postives = 187/189 (98.94%), Query Frame = 0
BLAST of Cp4.1LG14g10160 vs. ExPASy TrEMBL
Match: A0A6J1CVZ0 (Mediator of RNA polymerase II transcription subunit 10 OS=Momordica charantia OX=3673 GN=LOC111014791 PE=3 SV=1) HSP 1 Score: 339 bits (869), Expect = 1.84e-116 Identity = 179/189 (94.71%), Postives = 187/189 (98.94%), Query Frame = 0
BLAST of Cp4.1LG14g10160 vs. TAIR 10
Match: AT1G26665.1 (Mediator complex, subunit Med10 ) HSP 1 Score: 257.7 bits (657), Expect = 8.7e-69 Identity = 143/193 (74.09%), Postives = 164/193 (84.97%), Query Frame = 0
BLAST of Cp4.1LG14g10160 vs. TAIR 10
Match: AT1G26665.2 (Mediator complex, subunit Med10 ) HSP 1 Score: 255.0 bits (650), Expect = 5.6e-68 Identity = 142/193 (73.58%), Postives = 163/193 (84.46%), Query Frame = 0
BLAST of Cp4.1LG14g10160 vs. TAIR 10
Match: AT5G41910.1 (Mediator complex, subunit Med10 ) HSP 1 Score: 238.4 bits (607), Expect = 5.4e-63 Identity = 133/190 (70.00%), Postives = 156/190 (82.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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