Cp4.1LG14g10030 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAAGGGGAAAATGGCAGAGAACGCAACGCCAATGGTGCTCCGCATGAAGAAGGCATTGACGAAACTCACTGCCTTCGTCCGCTTCTGTCACGTTTGCCGGCCGCCTTCCCGGCGGATGCGGTCATTCGATTCCGACGGTCAGACGGCAGGGCTGAGGAGTATCTTGGGAGACGAAAGCATCATTGAGAAATGCTCTGTGAGAAAGCTCGAGCGTGGTGAGAGTTCGAGGAATGGAAGCTGTGAAGACGATGTCGATCAGCGAGCGCAGATTTTCATCGACAATTTCCGCCGTCAATTGATGCTAGAAAGACAAATTTCTTTGAAATTGAGGTACTATGGTATTAATAGCTCTGAAATCGATTACGAAGCGAGATCTCCGCCGTTCTCGTCCTCGATTCGTTGA ATGGAAAAGGGGAAAATGGCAGAGAACGCAACGCCAATGGTGCTCCGCATGAAGAAGGCATTGACGAAACTCACTGCCTTCGTCCGCTTCTGTCACGTTTGCCGGCCGCCTTCCCGGCGGATGCGGTCATTCGATTCCGACGGTCAGACGGCAGGGCTGAGGAGTATCTTGGGAGACGAAAGCATCATTGAGAAATGCTCTGTGAGAAAGCTCGAGCGTGGTGAGAGTTCGAGGAATGGAAGCTGTGAAGACGATGTCGATCAGCGAGCGCAGATTTTCATCGACAATTTCCGCCGTCAATTGATGCTAGAAAGACAAATTTCTTTGAAATTGAGGTACTATGGTATTAATAGCTCTGAAATCGATTACGAAGCGAGATCTCCGCCGTTCTCGTCCTCGATTCGTTGA ATGGAAAAGGGGAAAATGGCAGAGAACGCAACGCCAATGGTGCTCCGCATGAAGAAGGCATTGACGAAACTCACTGCCTTCGTCCGCTTCTGTCACGTTTGCCGGCCGCCTTCCCGGCGGATGCGGTCATTCGATTCCGACGGTCAGACGGCAGGGCTGAGGAGTATCTTGGGAGACGAAAGCATCATTGAGAAATGCTCTGTGAGAAAGCTCGAGCGTGGTGAGAGTTCGAGGAATGGAAGCTGTGAAGACGATGTCGATCAGCGAGCGCAGATTTTCATCGACAATTTCCGCCGTCAATTGATGCTAGAAAGACAAATTTCTTTGAAATTGAGGTACTATGGTATTAATAGCTCTGAAATCGATTACGAAGCGAGATCTCCGCCGTTCTCGTCCTCGATTCGTTGA MEKGKMAENATPMVLRMKKALTKLTAFVRFCHVCRPPSRRMRSFDSDGQTAGLRSILGDESIIEKCSVRKLERGESSRNGSCEDDVDQRAQIFIDNFRRQLMLERQISLKLRYYGINSSEIDYEARSPPFSSSIR Homology
BLAST of Cp4.1LG14g10030 vs. NCBI nr
Match: KAG7015798.1 (hypothetical protein SDJN02_23436, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 250 bits (639), Expect = 1.68e-83 Identity = 125/130 (96.15%), Postives = 128/130 (98.46%), Query Frame = 0
BLAST of Cp4.1LG14g10030 vs. NCBI nr
Match: KAG6577759.1 (hypothetical protein SDJN03_25333, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 248 bits (633), Expect = 1.38e-82 Identity = 124/130 (95.38%), Postives = 127/130 (97.69%), Query Frame = 0
BLAST of Cp4.1LG14g10030 vs. NCBI nr
Match: KAG6596691.1 (hypothetical protein SDJN03_09871, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028225.1 hypothetical protein SDJN02_09405, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 144 bits (364), Expect = 1.27e-41 Identity = 75/127 (59.06%), Postives = 94/127 (74.02%), Query Frame = 0
BLAST of Cp4.1LG14g10030 vs. NCBI nr
Match: KAA0052985.1 (hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa] >TYK11441.1 hypothetical protein E5676_scaffold139G00970 [Cucumis melo var. makuwa]) HSP 1 Score: 143 bits (360), Expect = 4.98e-41 Identity = 77/125 (61.60%), Postives = 91/125 (72.80%), Query Frame = 0
BLAST of Cp4.1LG14g10030 vs. NCBI nr
Match: XP_022145292.1 (uncharacterized protein LOC111014780 [Momordica charantia]) HSP 1 Score: 138 bits (347), Expect = 6.01e-39 Identity = 74/128 (57.81%), Postives = 91/128 (71.09%), Query Frame = 0
BLAST of Cp4.1LG14g10030 vs. ExPASy TrEMBL
Match: A0A5D3CHZ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00970 PE=4 SV=1) HSP 1 Score: 143 bits (360), Expect = 2.41e-41 Identity = 77/125 (61.60%), Postives = 91/125 (72.80%), Query Frame = 0
BLAST of Cp4.1LG14g10030 vs. ExPASy TrEMBL
Match: A0A6J1CW64 (uncharacterized protein LOC111014780 OS=Momordica charantia OX=3673 GN=LOC111014780 PE=4 SV=1) HSP 1 Score: 138 bits (347), Expect = 2.91e-39 Identity = 74/128 (57.81%), Postives = 91/128 (71.09%), Query Frame = 0
BLAST of Cp4.1LG14g10030 vs. ExPASy TrEMBL
Match: A0A0A0L4Z8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004530 PE=4 SV=1) HSP 1 Score: 137 bits (346), Expect = 3.34e-39 Identity = 76/125 (60.80%), Postives = 91/125 (72.80%), Query Frame = 0
BLAST of Cp4.1LG14g10030 vs. ExPASy TrEMBL
Match: A0A0A0L6A3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004520 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.18e-21 Identity = 61/123 (49.59%), Postives = 73/123 (59.35%), Query Frame = 0
BLAST of Cp4.1LG14g10030 vs. ExPASy TrEMBL
Match: A0A2C9UBN9 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G135500 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 3.79e-16 Identity = 51/114 (44.74%), Postives = 66/114 (57.89%), Query Frame = 0
BLAST of Cp4.1LG14g10030 vs. TAIR 10
Match: AT5G57510.1 (unknown protein; Has 27 Blast hits to 27 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 6.3e-06 Identity = 25/52 (48.08%), Postives = 37/52 (71.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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