Cp4.1LG14g09730 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG14g09730
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	glycine-rich cell wall structural protein 1.8-like
Location	Cp4.1LG14: 8136581 .. 8145137 (-)
RNA-Seq Expression	Cp4.1LG14g09730
Synteny	Cp4.1LG14g09730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTATCCTCAAATTCTCTCCATGGCTATCACTAGAGTCTTGTGCCTTACCTTTCTTCTCCTTGTAGGGTTCGGTTTAGCTTCGGCTGCCCGAACCCTTCTTGATTATGATCCCCGAACACGTCACTATGGTTACGATCGCCCTAACCCTAGAGAAGGGTACGATTCGGGGCATCGTGACGAATCCTATGATAATGTATATGGAGGAAGATCGGGTGGAGGATATGGAGTCGGAGGGTCGGCTCTTGGAGGTTCAGGCTATGGAAGTGGTGGAGTAAGGGGTTCGGGATATGGTAACGGTGGAGGAAATGCATACGGAGGAGGGGTTAGCTCCGGCGTAGGAGGAGCAGGATATGGAAGTGGGAGTAGATATGGAGGTGGAGAAGATCATGGTGTTGGTTACGGTGGTGGGCGAAGTGGAGGTTATGAAAATGGAGGCAATGGTGGGTATGGGCAAGGAAGAGATCATGATATCGGCTATGGAAGTAGAAATGGAAATGGAAATGGAAATGGAAATGGGTATGGAGATTCCCATGGATATGGAAATGGTGGAGGAGTCGACGGTGGGTATGGAAGGGGAGACGGAGTAGGAGGCCATGCTGGTGGTTCTGGCATTGGCGCCGGCGGTGGTTACGGAGGCCATGCTGGTGGTTCTGGAATTGGGGCCGGCGGAGCTTACGGCAGTGGAGGAGCTCACGGAGGAGAACATGATAATAGCAAAGGAAGCGGAGAAGAAGGAGGTTATGACGGTGGATATGCACTCACAAACTCCATCTCAAACAAGAATTGAAACCCTTCTTAAGTAATGAACCCAATATTCATTATGTTAACAAAATAAAGAAATTGGGTGAGTGAATGTTGTTTTCTTATCTATGTCGAAACCGCTTTCAATGAATGTCAAATTCGAATCAACTGTTCAATGATAAAACAAAATTTGGATGACATTGGTATGGAGCAAATTGATTCAATCATACTTATTTTCTATTAAAAATAGTTATTAACCTGAAAAAGTTTAGAAAATAATTTGGGGTTTATTTAGGAGTGGTTAGTGATTTTAACTTCAAAAAAAAGTTTAAGAAACTTGTTGTGATTTCTCCAATGTAAATACTCCTGAACATATGCTCTTTACAACAACTGAGAGGATTAAAAAGTTAAGTGTTTAATGTTTCTTTGTTTCAAAATATCTCTCCCCTTAAGTTATTTTTGTTGCTTTTTTATTTGTTTAGACATATTTTGTTTGTGGGTCATATCCAACATTTGGTATCAGAGCCAGGATGTCGAAACAAATTTTGTCACTTTACAAAGTCACCGAAGGAGAAGTGAAAACTATAAGGAGTGGAAGGGAGGGGAGTGTAATGCTCCAAAACCACACGAAGAGTAACTACGTAACATGATCGATAAAGATGCGTGTTAGCTTACAGGCACAAGGTATGTGGGACATCATCAAGCATGGTGACGTTGAGGAGCGTAACGACAGAATGACTCTTGCCACCATCTACCAAGCAGTCTCAGAGGATGTACTTCTCATTAGCAGAGAAGGACTCGGCAAAGGCAGCATAGGAGGCACTGCAAACAATGCATTTGGGTGTGAAACGTGTCAAGGAAGCAAAGGTGGAGACCTTGAAGAGTGAGTTCGAGGCTACCCGCATGAAGGACAATGAATCAATAGATGGATTTTCCATGAAGTTGAGGACAATGGTCAGCGGCATTCTTTCATTACGCGACGTGGTGGAGGAGATCTCCGTCGTCAAGAAGTTCCTTTGAGCAATTCTGTCACGGCCCGATTTTCGAGGCTTCGAAAAATCAAATCGTGAGTAAAAAGATGAAATCGAAAACGAACAAAAAGAAAAGAAAATATAAAGAAGAGTGAAATAGAAAGATGAAAATCAAATAAAATTAAAATATTTCAAAAGAGGATTTAAGTTTACAAAAAAGGAAATAAAATACAAATATAAAAGGAATTCGCAAAAGACTCCAAAAGACCGAAAAGGGACTGACGCTTCGGAATGACCCCTCTGTGACCGCACAGCTCTCCAACGCTCCTCCACCTCGACCGACACCTGAAAAAAAAAAGAAGGTAGAAAGGAATGAGTATAAAAATTATACGGAGTAAGTCACCTACTTGTAGGCTCTCTTCGCATCTTAATTTACAGATTCCCACGGTTTCCTAACTCGGTTCTAGGACATCTGGTTCTAGTCTTAGTCCCTTGGGGCTTGCCCCTTGGGTTTCAGTGATTCATCGTTCTTTCTTTGAATGCCTAGAGGTTCCTTACGCCAAGCTAATGTGGTCGGTATCTCTCTATAAGGTGCTGCCTCTACATGGCTATTTGGGACTACATGGTATCTAACCTAGGGGTGTGCTGAATACCCCTACGCTCATATAGTCCCCCTATGGGGGGCGCAACCCAACCCGTTCCCATGCAGCTAATGGGTTGTACGACGTGGGGACACATTTCCCATGTGAAATGGCTAAGAGCAATAAGAACTGATCAGGGACCCTTGATCCTCCCACGAAGCTATAGATACCGTTCTCACGCTAGCAATCTATGAACACTTCGAGGTACCTTCTTGTCGCGGTAAACTGCTAAGTTCCTAGGAGAAAATTAAATATGGTTGGAGCAACATATGGCTCCTAACAATAATTCCCTAAGCTTATCATAGAAATGGGCCCTAGCAATTAACAGAATGTGCATGCAATCGTCTTCTAACATCATACTATATAATTCATGCAAACTAGGCATACCGGCTCAACGAGGCGATGACCTCCATCAAGCACCTAGAGCACGAAGTTCGCGCTCAATGGGGCGAATTCGTCCATCAAGCACCCGGAACACAAAATACACAATTCCAACATAAATTAAATGCATGCATACATACAGCAACACTCATGTTATTCACCCAATACAATCATATGAAACACTCTAACTAATAATTTACATGGAGAGTTAATCTGAAGTGAAACTTCTAACATGCATGCAATCCAAGCCAATCTTACAAGTATTTCTTCCTAAATACCGAGTGGTGATTTACCTGGTTGACGCGTACCCTTTTTGCTAGTGTTTCTTTGCCCGTGAGGTGTCCAAAAATACTGATTTCTTTAAATTAGGTCCCTATTCACGTAAAAACAGTATTAGAACTGGAACTAGGACAAAAATCGGGCAAACAGAGAGCAACCGGGCCAAATTGGCCGTTCCACGCGCGCTCACGCGCTGGGAGTGCGTGGTCACGCGCGCAGGAAGGCGCTAGTCGCAGGCTGCACGCGCGCCCGCTTCCACCAAACTTCTTCACATATCATGCGTAGAATTGTTCCTAGATGAATATATCAAGATTTTAGATCTTGATTCACAAAGGAAAACGTAGATTTGAGAAAACGTTCAAGATCCTTACCTTGCGGGTTTTCTGATTTCTTGCTGAAAAATGGGACTCCGGCCACCCACATTCTCTTTTCCCTTCCAAGAAAGTCTCTCTGCATCATGATCTTCACCGGAATAGACTCCGACGGTAGTTTTCGGTGAGTCTTCCTGCGGTTCATCCCTTCTTCTCTCTCTAGGTTCTCTCTACCCCTTTCTCTCACTATTTCTCTTTTGCACGACTCTGGATGGGTTTCATTTGGACCTCTTAGGTGGTTGGAGGGGCAAATTTACCTATTTGCCCCTCTCTCGACTTTTCCTTTTTTTTTTTCTTTTTCTCTTTCTTCGGGTATTACAAGTTCCCCCAAGATTCATGCAAATTGTTGCCTCCATCGAGCAGTTCAGTGACCTCAAGAACATGTTGGTTGAGAAGGTCGTTGACCGTCTTAAGGTCCATGAAGAGAGACTTCGTGGCTACGGAGACAAAGAGGAGGAGAAATACCTCTAACTCACACATGAGAAGTGGCTCGCACAGACAAAAAAGAAAGATGCAATGACTCTTCTTTTTCACGTACGAGGAGACAGTGGAGCCATAACAAGAAAAACATAGGTCGTGGACGTGGTTGCGGACATAACCGTAGACGTGGTGGTAGAGGAGGTCGTGACAATACCTCACAAATTCATGACAATGTCAAGCCTCGGAAGGACAAGATATGATCAAGTGTTACTCTTGTGGAAAATACGGGCATTATGTGGTAGAGTGCCACAACAATGGGCGTGATGAGGAGCCAAACCTCATGTTCACGGATGATGAAGAACCCACATTGATGTTGGCTGAGAATATATTCAACCTGTTGGTGCTCAATGAAGGGAAGGTTATGTGAACCTCGAGTTGAAGAGAAATATTATTAGACTTGGTCAATTGACAATATAAACATTCCTCAAGATATTATTAGAGTGGAGATAGTCGACTCGTTCCTCAAGATATACAACAGAAACGAAGCTCTGTTGATGAAAGTAAGACGATTGCGAAACTGCTTGTATAAGATACTATTTAAAGACCATCAACATCTTCCAAAATTATTCATTGGCATTGACAACAAGAAAGTGAAGAAGAAACCAATGGGTTAAGAGAAAAAGGAACCGAAGAACATAACCAAGAAAAAACCAGAGGCTACTACAATCAGCGAAGAACAACCTAACCACGTAAGCCTAGAGAAAGGCCACCAAGGCGTAAGAAAAAGGGACATCAAACTTGTCCTTTCAACCAAAAAAGGCTAGAGGCATGTATAAAAAGAAGGTTGAAAGACACAAGAGTACCCTGTAAGATGAAGAAGTCCCTACACATAACAGAGAAGCGGAAGAAATTGTATGTTGTGAAATTAAAATTTCTTAGGAAGAATATAGAGTTGATCAGGGATCAAGTAACCTTGACACTACAGAGCAACATGCAAATATTCTCACCAAGACCCTAGCAAGAGTTAAGCTTTGCAAACATGGAGGAGTTATTCCAAAGTCAAGAATCTCAAGTAAAATAAGCTTAGGCCGGAGAATGTGAGTCATTAATCTTAACTTGGTAAAAATAGTTATTAAGTTGAATTAGGTTAGAAAATAGTTGTGATTTATTTAGAAGTATAGCGAGTGGTTTTAACTTGGAGAGAAAGTTTAGGAAACTAGGTGTGCTTTCTCCACTATAAATACTCATGAAATGTATGCTGTTTACCACAAAAACAAAATTGAATTGCTAAGTGCTTAAGGTTTCTTTGTTTCAAAAGATCTCTCTCGCAAATTGTTCTTTTTAGTTTTTTTTATTTGTTTCGAGATATTTTGATCATGGGTCATATCCAACCCGTTGAAGGTGTTTGAGTAGGTAAAATGTTTGTTTTGAATCAAACATCATTTTATAAGAAACTTCAAATATACTTAGATTTGACGGAGAAGTAGAATAATAAGACTCCAAACACAACAATATTTCTTGACTAGGGAAGTTATGATTCAAAAACTTTAATTTAGAAGTCTTTAAAATTGGTATGAGAAGTCTCATTCTCATTTAAACTTTGAGCTCTAGTATGTATTGGTGAAAAGAAACTATATGATATAATAACTAAGCATGAGATTTTCTTTTATCGTAACAAAGGATTAAATTTAGACAACCAAAAGATTGAAAGAAAGTAACAATGAGCTTCTCCCTTAGATATGGAGGAGTTACCCAAGATGACCTTTTCATTACGGTTGGGGCTAATAGGCGAACGTACGCATGTTTTGGGGAGGCCACATGTCACACATAGAAAAACGAGGGAAAAACCTAGTGTGTTGCCTCGGGCTAGTCTCGAAGTGTGGACGAGCGCACAATGAGTGGGACATACGTCTTGTTCTTATAAGATATCTATAAATCCGTTTGAAATACGTATGCTAGGATTCGAAAAAAAGAATATCGAGGACTGTGCATTTGGACCCGCTCCTGGCAGGAGAGCATGAAACCTTCGTGTAAGAGTTTTTCCAATCGCATGTGATGCCTCTGAAGGGTTAGTTTTGCCCATTTAATTCGACCTTTATTTGACTGTTTTCAATTCATTTGGAATAATAAGCTCATTATAACTTGAATTAGGGTCGGCTAGTGAAATTCTGAAATTGTGGAGTACCGAGCCAGCAGGAAACAAGAATGAGTACGGCATGCACGACTAAGTAAGTAGCCATTTGAATTTTCTTGAACAGTACTTATATAAATCGGTAGAATGTGATAGCATGCAAATATGATCTACCATACATAGCTAAAAAACGCATGTCTAGGGTATAGAATTGAGCTAAGATTTTAAGTATGCTATATATGATACATACAAATATTTGAAATGTCTTTAGAATGAGATTTCTAAATGAGATTTCTAATTTGTATATTGTGTGAGTTGTTTTCGTTCTATTAGTTACTCTATACTGAGATTGAAATCTATACTCAAGGTGATTGATTGAATTATCTCCATATTAAGCATACATGTATGTTTTGAGAATGAGATATATACTCCATGAGAATGAGATATATACTCCAAGTGATGGATTGAGTTATCTTCCTGTTAATCATGCATGTACACTTTGAGAATGAGATTTGTACTCTAATGCTTAATTGAGTTATCTCCTTATTTGAGCATGCATGAATGTATTGAGTTAAGAATAAGACGCTATAATTAGGACAGTTTGACGATTAACCTAGGTCAAGATACCTCTACTAGACCGAGCACCACAAGATCATTAGCAATGATCAGAGGTCTAGACCCTGGTGCTCTGAGAATCAAATTAATCCTAATGAGCTAGTCTAGTAAATCTGCAACGCTAGAAAATGTGAACAACTATCTGACTTCGATTGAGTTTGTGACAAGCAAGAAAATGACTCAAGATTTCGAGGCCTCCTAGAAGTTCATATAGTCGTAGAACCTAAGCTTAAAATACCTAAAGTCTAATTACAACAGATGAAACTTATACCCTTAGCTTGTAAATATCATGATTACAAGTTTGATGAAGAATCCTCAAGAAAAGACATAGAATGTTTGGACGAATCTCACTTTTAATCTCTCGTAGGTCGAAACGTGCAACTCTAACCTTTTTCTATGGTAGAAGATGATGACATGGTTGGTTCAGTTGAACTAGATACCCATAATTCAATTTATCGGGTATCTTATCTTTCCACTCATATAGTTTGTTTTAGACCATAGAAAAAAAAAATTCTTGAAAGCGTTAAGATTCTAAAATTTTATCTATAATGGACAAACTACATCACTCTCAATATCTCACGCACTACAAGATTTTTTTTTATTATTTTCTTTTTAGTGCCAACATGATGAGATTTAATATCCTTAAAATGTAATGATTTATTCCACCATTATTGTACTCCAAATGAGAGATTATTTAATGTATTTGTTCAAGTGGGAATTAGGAAAACATGCATTAATGATATGTAAGAGATATTATCTTAATGCAATGTCGTTTCATAACCCATTTCATGTCTCAAATCTCATGGCGGCTCAAGTAAAAAAAGGGAAAAAGAACCCTAGTTAAATATATGCTCTTTTATGTAGTGGATTTTTATAGCCATGGTGAATTTAATCCTACAAATATCTTCCTAAAACCAAATAAATTATCATGTTTCTTTGCTCTTTTTCTTAATCTTATCAAATCTTGCAAGATCGTGTTAATGGAAGATGAGATCAAAGCGTTGCTTAAATATTCATATAATTTAGTTCAAGTGCAACTTGTGAGCCAAATATGAGAAAAGGCACATTATAGTGCTTGCTTCATGGACATTTGTGGACGTGTATATCCAAATTATCTTCTTTTTTTCTGCATGTGGCGCCCTCTTTACAATTAAGCACACCATAGAGAAGATTATGAACCCTCCACCATTTCCTATATAAGGAGACCAATGGATTCATTCTAGGCATCCTCAAATTCTCTCCATGGCTATCACTAGAGTCTTGTGCCTTAGCTTTCTTCTCCTTGTAGGGTTGGGTTTAGCTTCGGCTGCCCGAACCCTTCTTGATTATGATCCCCGAACACATCACTATGGTTACGATCGCCCTAACCCTAGAGAAGGGTACGATTCGGGGCATCGTGACGAATCCTATGATAATGTATATGGAGGAAGATCGGGTGGAGGATATGGAGTCGGAGGGTCGGCTCTTGGAGGTTCAGGCTATGGAAGTGGTGGAGTAAGGGGTTCGGGATATGGTAACGGTGGAGGAAATGCATACGGAGGAGGGGTTAGCTCCGGCGTAGGAGGAGCAGGATATGGAAGTGGGAGTAGATATGGAGGTGGAGAAGATCATGGTGTTGGTTACGGTGGTGGGCGAAGTGGAGGTTATGAAAATGGAGGCAATGGTGGGTATGGGCAAGGAAGAGATCATGATATCGGCTATGGAAGTAGAAATGGAAATGGAAATGGAAATGGAAATGGGTATGGAGATTCCCATGGATATGGAAATGGTGGAGGAGTCGACGGTGGGTATGGAAGGGGAGACGGAGTAGGAGGCCATGCTGGTGGTTCTGGCATTGGCGCCGGCGGTGGTTACGGAGGCCATGCTGGTGGTTCTGGAATTGGGGCCGGCGGAGCTTACGGCAGTGGAGGAGGTCACGGAGGAGAACATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGACGGTGGATATGCACTCACAAACTCCATCTCAAACAAGAAT

mRNA sequence

GTATCCTCAAATTCTCTCCATGGCTATCACTAGAGTCTTGTGCCTTACCTTTCTTCTCCTTGTAGGGTTCGGTTTAGCTTCGGCTGCCCGAACCCTTCTTGATTATGATCCCCGAACACGTCACTATGGTTACGATCGCCCTAACCCTAGAGAAGGGTACGATTCGGGGCATCGTGACGAATCCTATGATAATGTATATGGAGGAAGATCGGGTGGAGGATATGGAGTCGGAGGGTCGGCTCTTGGAGGTTCAGGCTATGGAAGTGGTGGAGTAAGGGGTTCGGGATATGGTAACGGTGGAGGAAATGCATACGGAGGAGGGGTTAGCTCCGGCGTAGGAGGAGCAGGATATGGAAGTGGGAGTAGATATGGAGGTGGAGAAGATCATGGTGTTGGTTACGGTGGTGGGCGAAGTGGAGGTTATGAAAATGGAGGCAATGGTGGGTATGGGCAAGGAAGAGATCATGATATCGGCTATGGAAGTAGAAATGGAAATGGAAATGGAAATGGAAATGGGTATGGAGATTCCCATGGATATGGAAATGGTGGAGGAGTCGACGGTGGGTATGGAAGGGGAGACGGAGTAGGAGGCCATGCTGGTGGTTCTGGCATTGGCGCCGGCGGTGGTTACGGAGGCCATGCTGGTGGTTCTGGAATTGGGGCCGGCGGAGCTTACGGCAGTGGAGGAGCTCACGGAGGAGAACATGATAATAGCAAAGGAAGCGGAGAAGAAGGAGGTTATGACGGGTTGGGTTTAGCTTCGGCTGCCCGAACCCTTCTTGATTATGATCCCCGAACACATCACTATGGTTACGATCGCCCTAACCCTAGAGAAGGGTACGATTCGGGGCATCGTGACGAATCCTATGATAATGTATATGGAGGAAGATCGGGTGGAGGATATGGAGTCGGAGGGTCGGCTCTTGGAGGTTCAGGCTATGGAAGTGGTGGAGTAAGGGGTTCGGGATATGGTAACGGTGGAGGAAATGCATACGGAGGAGGGGTTAGCTCCGGCGTAGGAGGAGCAGGATATGGAAGTGGGAGTAGATATGGAGGTGGAGAAGATCATGGTGTTGGTTACGGTGGTGGGCGAAGTGGAGGTTATGAAAATGGAGGCAATGGTGGGTATGGGCAAGGAAGAGATCATGATATCGGCTATGGAAGTAGAAATGGAAATGGAAATGGAAATGGAAATGGGTATGGAGATTCCCATGGATATGGAAATGGTGGAGGAGTCGACGGTGGGTATGGAAGGGGAGACGGAGTAGGAGGCCATGCTGGTGGTTCTGGCATTGGCGCCGGCGGTGGTTACGGAGGCCATGCTGGTGGTTCTGGAATTGGGGCCGGCGGAGCTTACGGCAGTGGAGGAGGTCACGGAGGAGAACATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGACGGTGGATATGCACTCACAAACTCCATCTCAAACAAGAAT

Coding sequence (CDS)

ATGGCTATCACTAGAGTCTTGTGCCTTACCTTTCTTCTCCTTGTAGGGTTCGGTTTAGCTTCGGCTGCCCGAACCCTTCTTGATTATGATCCCCGAACACGTCACTATGGTTACGATCGCCCTAACCCTAGAGAAGGGTACGATTCGGGGCATCGTGACGAATCCTATGATAATGTATATGGAGGAAGATCGGGTGGAGGATATGGAGTCGGAGGGTCGGCTCTTGGAGGTTCAGGCTATGGAAGTGGTGGAGTAAGGGGTTCGGGATATGGTAACGGTGGAGGAAATGCATACGGAGGAGGGGTTAGCTCCGGCGTAGGAGGAGCAGGATATGGAAGTGGGAGTAGATATGGAGGTGGAGAAGATCATGGTGTTGGTTACGGTGGTGGGCGAAGTGGAGGTTATGAAAATGGAGGCAATGGTGGGTATGGGCAAGGAAGAGATCATGATATCGGCTATGGAAGTAGAAATGGAAATGGAAATGGAAATGGAAATGGGTATGGAGATTCCCATGGATATGGAAATGGTGGAGGAGTCGACGGTGGGTATGGAAGGGGAGACGGAGTAGGAGGCCATGCTGGTGGTTCTGGCATTGGCGCCGGCGGTGGTTACGGAGGCCATGCTGGTGGTTCTGGAATTGGGGCCGGCGGAGCTTACGGCAGTGGAGGAGCTCACGGAGGAGAACATGATAATAGCAAAGGAAGCGGAGAAGAAGGAGGTTATGACGGGTTGGGTTTAGCTTCGGCTGCCCGAACCCTTCTTGATTATGATCCCCGAACACATCACTATGGTTACGATCGCCCTAACCCTAGAGAAGGGTACGATTCGGGGCATCGTGACGAATCCTATGATAATGTATATGGAGGAAGATCGGGTGGAGGATATGGAGTCGGAGGGTCGGCTCTTGGAGGTTCAGGCTATGGAAGTGGTGGAGTAAGGGGTTCGGGATATGGTAACGGTGGAGGAAATGCATACGGAGGAGGGGTTAGCTCCGGCGTAGGAGGAGCAGGATATGGAAGTGGGAGTAGATATGGAGGTGGAGAAGATCATGGTGTTGGTTACGGTGGTGGGCGAAGTGGAGGTTATGAAAATGGAGGCAATGGTGGGTATGGGCAAGGAAGAGATCATGATATCGGCTATGGAAGTAGAAATGGAAATGGAAATGGAAATGGAAATGGGTATGGAGATTCCCATGGATATGGAAATGGTGGAGGAGTCGACGGTGGGTATGGAAGGGGAGACGGAGTAGGAGGCCATGCTGGTGGTTCTGGCATTGGCGCCGGCGGTGGTTACGGAGGCCATGCTGGTGGTTCTGGAATTGGGGCCGGCGGAGCTTACGGCAGTGGAGGAGGTCACGGAGGAGAACATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGACGGTGGATATGCACTCACAAACTCCATCTCAAACAAGAAT

Protein sequence

MAITRVLCLTFLLLVGFGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNVYGGRSGGGYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGGEDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGGYDGLGLASAARTLLDYDPRTHHYGYDRPNPREGYDSGHRDESYDNVYGGRSGGGYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGGEDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGGHGGEHDNSKGSGEEGGYDGGYALTNSISNKN

Homology

[Close]

BLAST of Cp4.1LG14g09730 vs. ExPASy Swiss-Prot
Match: P10496 (Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.1e-15
Identity = 220/496 (44.35%), Postives = 244/496 (49.19%), Query Frame = 0


Query: 3   ITRVLCLTFLLLVGFGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNVYGG 62
           I R+  L FL+L+  G+ SA R LL  D      GY       G+ +G         YGG
Sbjct: 4   IHRLPSLVFLVLLALGVCSARRALLTLDA-----GYGL-----GHGTGGGYGGAAGSYGG 63

Query: 63  RSGGGYGVGGSALG-----GSGYGSGGVRGSGYGNGG--GNAYGGGVSSGVGGAGYGSGS 122
             GGG G GG   G     G G GSGG +G G G GG  G  YGGG     GG+G G G 
Sbjct: 64  GGGGGSGGGGGYAGEHGVVGYGGGSGGGQGGGVGYGGDQGAGYGGG-----GGSGGGGGV 123

Query: 123 RYGGGEDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGY----GDSH 182
            YGGG + G GYGGG+ G    G  GGYG G +H IGYG   G+G G G GY        
Sbjct: 124 AYGGGGERG-GYGGGQGG----GAGGGYGAGGEHGIGYGGGGGSGAGGGGGYNAGGAQGG 183

Query: 183 GYGNGGGV-DGGYGRGDGVGGHAGGSGI--GAGGGYGG---HAGGSGIGAGGAYGSGGAH 242
           GYG GGG   GG G GD  GG+ GG G   GAGGGYGG   H GG G G GG  G G   
Sbjct: 184 GYGTGGGAGGGGGGGGDHGGGYGGGQGAGGGAGGGYGGGGEHGGGGGGGQGGGAGGGYGA 243

Query: 243 GGEHDNSKGSGEEGGYDGLGLASAARTLLDYDPRTHHYGYDRPNPREGYDSGHRDESYDN 302
           GGEH    G G+ GG  G                    GY       G   G +      
Sbjct: 244 GGEHGGGAGGGQGGGAGG--------------------GYGAGGEHGGGAGGGQ------ 303

Query: 303 VYGGRSGGGYGVGGSALGGSGYGSGGVRGSGYGNGG--GNAYGGGVSSGVGGAGYGSGSR 362
             GG +GGGYG GG   GG+G G GG  G GYG GG  G   GGG   G GG GYG+G  
Sbjct: 304 --GGGAGGGYGAGGEHGGGAGGGQGGGAGGGYGAGGEHGGGAGGGQGGGAGG-GYGAGGE 363

Query: 363 YGGGEDHGVGYGGGRSGGY----ENGGNGGYGQGRDHDIGYGS--RNGNGNGNGNGYGDS 422
           +GGG   G G GGG  GGY    E+GG  G GQG     GYG+   +G G G G G G  
Sbjct: 364 HGGG--GGGGQGGGAGGGYAAVGEHGGGYGGGQGGGDGGGYGTGGEHGGGYGGGQGGGAG 423

Query: 423 HGYGNGGGVDGGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGGHGGEHD 474
            GYG GG   GGYG G G GG  G  G     GYGG  GG G G+GG YG GG HGG + 
Sbjct: 424 GGYGTGGEHGGGYGGGQGGGGGYGAGGDHGAAGYGGGEGGGG-GSGGGYGDGGAHGGGYG 445

[Close]

BLAST of Cp4.1LG14g09730 vs. ExPASy Swiss-Prot
Match: P27483 (Glycine-rich cell wall structural protein OS=Arabidopsis thaliana OX=3702 GN=At3g17050 PE=3 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 4.1e-04
Identity = 165/371 (44.47%), Postives = 187/371 (50.40%), Query Frame = 0


Query: 81  GSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGGEDHGVGYGGGRSGGYENGGN 140
           G GG  G G G GGG  +GGG+ +G GG G G+G   GGG   G G GGG  GG   G  
Sbjct: 32  GGGGGGGLGGGFGGGKGFGGGIGAG-GGFGGGAGGGAGGGLGGGAGGGGGIGGGAGGGAG 91

Query: 141 GGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHAGGSGIGA 200
           GG        +G G+  G G G+G G G   G G GGG+ GG+G G G GG  GGSG G 
Sbjct: 92  GG--------LGGGAGGGLGGGHGGGIGGGAGGGAGGGLGGGHGGGIG-GGAGGGSGGGL 151

Query: 201 GGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGGYDGLGLASAARTLLDYDPRT 260
           GGG GG AGG   GAGG  G GG HGG      G G  GG  G                 
Sbjct: 152 GGGIGGGAGG---GAGGGGGLGGGHGGGIGGGAGGGAGGGLGG----------------- 211

Query: 261 HHYGYDRPNPREGYDSGHRDESYDNVYGGRSGG-GYGVGGSALGGSGYGSGGVRGSGYGN 320
                           GH         GG  GG G G+GG A GG+G G G   G G G 
Sbjct: 212 ----------------GHGGGIGGGAGGGSGGGLGGGIGGGAGGGAGGGGGAGGGGGLGG 271

Query: 321 GGGNAYGGGVSSGV-GGAGYGSGSRYGGGEDHGVGYGGGRSGGYENGGNGGYGQGRDHDI 380
           G G  +GGG   G+ GGAG G+G  +GGG   G G GGG  GG+  G  GG G G     
Sbjct: 272 GHGGGFGGGAGGGLGGGAGGGTGGGFGGGA--GGGAGGGAGGGFGGGAGGGAGGG----F 331

Query: 381 GYGSRNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHAGGSGIGAGGGYGGHAGGS 440
           G G+  G G G G G+G   G G+GGGV GG+G G G GG  GG+G GAGGG GG  GG 
Sbjct: 332 GGGAGGGAGGGAGGGFGGGAGGGHGGGVGGGFGGGSG-GGFGGGAGGGAGGGAGGGFGGG 348

Query: 441 GIGAGGAYGSG 450
           G GAGG +G G
Sbjct: 392 G-GAGGGFGGG 348

[Close]

BLAST of Cp4.1LG14g09730 vs. NCBI nr
Match: XP_023552983.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 773 bits (1996), Expect = 9.96e-278
Identity = 480/542 (88.56%), Postives = 481/542 (88.75%), Query Frame = 0


Query: 1   MAITRVLCLTFLLLVGFGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNVY 60
           MAITRVLCL+FLLLVGFGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNVY
Sbjct: 1   MAITRVLCLSFLLLVGFGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNVY 60

Query: 61  GGRSGGGYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120
           GGRSGGGYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG
Sbjct: 61  GGRSGGGYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180
           EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD
Sbjct: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180

Query: 181 GGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG 240
           GGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG
Sbjct: 181 GGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG 240

Query: 241 YDG--------------------------------------------------------- 300
           YDG                                                         
Sbjct: 241 YDGGYALTNSISNKNWSASEILKLWSTEQAGNKRDQWIHSRHPQILSMAITRVLCLSFLL 300

Query: 301 ---LGLASAARTLLDYDPRTHHYGYDRPNPREGYDSGHRDESYDNVYGGRSGGGYGVGGS 360
              LGLASAARTLLDYDPRTHHYGYDRPNPREGYDSGHRDESYDNVYGGRSGGGYGVGGS
Sbjct: 301 LVGLGLASAARTLLDYDPRTHHYGYDRPNPREGYDSGHRDESYDNVYGGRSGGGYGVGGS 360

Query: 361 ALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGGEDHGVGYGGGRSG 420
           ALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGGEDHGVGYGGGRSG
Sbjct: 361 ALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGGEDHGVGYGGGRSG 420

Query: 421 GYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHA 480
           GYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHA
Sbjct: 421 GYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHA 480

Query: 481 GGSGIGAGGGYGGHAGGSGIGAGGAYGSGGGHGGEHDNSKGSGEEGGYDGGYALTNSISN 482
           GGSGIGAGGGYGGHAGGSGIGAGGAYGSGG HGGEHDNSKGSGEEGGYDGGYALTNSISN
Sbjct: 481 GGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGGYDGGYALTNSISN 540

[Close]

BLAST of Cp4.1LG14g09730 vs. NCBI nr
Match: XP_023552981.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 407 bits (1047), Expect = 4.89e-138
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MAITRVLCLTFLLLVGFGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNVY 60
           MAITRVLCLTFLLLVGFGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNVY
Sbjct: 1   MAITRVLCLTFLLLVGFGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNVY 60

Query: 61  GGRSGGGYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120
           GGRSGGGYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG
Sbjct: 61  GGRSGGGYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180
           EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD
Sbjct: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180

Query: 181 GGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG 240
           GGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG
Sbjct: 181 GGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG 240

Query: 241 YDG 243
           YDG
Sbjct: 241 YDG 243

[Close]

BLAST of Cp4.1LG14g09730 vs. NCBI nr
Match: XP_023552980.1 (glycine-rich cell wall structural protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 403 bits (1035), Expect = 3.23e-136
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 243 GLGLASAARTLLDYDPRTHHYGYDRPNPREGYDSGHRDESYDNVYGGRSGGGYGVGGSAL 302
           GLGLASAARTLLDYDPRTHHYGYDRPNPREGYDSGHRDESYDNVYGGRSGGGYGVGGSAL
Sbjct: 16  GLGLASAARTLLDYDPRTHHYGYDRPNPREGYDSGHRDESYDNVYGGRSGGGYGVGGSAL 75

Query: 303 GGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGGEDHGVGYGGGRSGGY 362
           GGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGGEDHGVGYGGGRSGGY
Sbjct: 76  GGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGGEDHGVGYGGGRSGGY 135

Query: 363 ENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHAGG 422
           ENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHAGG
Sbjct: 136 ENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHAGG 195

Query: 423 SGIGAGGGYGGHAGGSGIGAGGAYGSGGGHGGEHDNSKGSGEEGGYDGGYALTNSISNKN 482
           SGIGAGGGYGGHAGGSGIGAGGAYGSGGGHGGEHDNSKGSGEEGGYDGGYALTNSISNKN
Sbjct: 196 SGIGAGGGYGGHAGGSGIGAGGAYGSGGGHGGEHDNSKGSGEEGGYDGGYALTNSISNKN 255

[Close]

BLAST of Cp4.1LG14g09730 vs. NCBI nr
Match: XP_023552978.1 (glycine-rich cell wall structural protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 399 bits (1025), Expect = 1.06e-134
Identity = 239/243 (98.35%), Postives = 240/243 (98.77%), Query Frame = 0


Query: 1   MAITRVLCLTFLLLVGFGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNVY 60
           MAITRVLCL+FLLLVG GLASAARTLLDYDPRTR YGYDRPNPREGYDSGHRDESYDNVY
Sbjct: 1   MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRQYGYDRPNPREGYDSGHRDESYDNVY 60

Query: 61  GGRSGGGYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120
           GGRSGGGYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG
Sbjct: 61  GGRSGGGYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180
           EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD
Sbjct: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180

Query: 181 GGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG 240
           GGYGRGDGVGGHAGGSGIG GGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG
Sbjct: 181 GGYGRGDGVGGHAGGSGIGTGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG 240

Query: 241 YDG 243
           YDG
Sbjct: 241 YDG 243

[Close]

BLAST of Cp4.1LG14g09730 vs. NCBI nr
Match: XP_023552979.1 (glycine-rich cell wall structural protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 398 bits (1022), Expect = 5.51e-134
Identity = 238/239 (99.58%), Postives = 238/239 (99.58%), Query Frame = 0


Query: 244 LGLASAARTLLDYDPRTHHYGYDRPNPREGYDSGHRDESYDNVYGGRSGGGYGVGGSALG 303
           LGLASAARTLLDYDPRT HYGYDRPNPREGYDSGHRDESYDNVYGGRSGGGYGVGGSALG
Sbjct: 34  LGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNVYGGRSGGGYGVGGSALG 93

Query: 304 GSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGGEDHGVGYGGGRSGGYE 363
           GSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGGEDHGVGYGGGRSGGYE
Sbjct: 94  GSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGGEDHGVGYGGGRSGGYE 153

Query: 364 NGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHAGGS 423
           NGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHAGGS
Sbjct: 154 NGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHAGGS 213

Query: 424 GIGAGGGYGGHAGGSGIGAGGAYGSGGGHGGEHDNSKGSGEEGGYDGGYALTNSISNKN 482
           GIGAGGGYGGHAGGSGIGAGGAYGSGGGHGGEHDNSKGSGEEGGYDGGYALTNSISNKN
Sbjct: 214 GIGAGGGYGGHAGGSGIGAGGAYGSGGGHGGEHDNSKGSGEEGGYDGGYALTNSISNKN 272

[Close]

BLAST of Cp4.1LG14g09730 vs. ExPASy TrEMBL
Match: A0A6J1L118 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 GN=LOC111500189 PE=4 SV=1)

HSP 1 Score: 396 bits (1017), Expect = 8.34e-134
Identity = 238/243 (97.94%), Postives = 238/243 (97.94%), Query Frame = 0


Query: 1   MAITRVLCLTFLLLVGFGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNVY 60
           MAITRVLCLTFLLLVG GLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDN Y
Sbjct: 1   MAITRVLCLTFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60

Query: 61  GGRSGGGYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120
           GGRSGG YGV GSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG
Sbjct: 61  GGRSGGEYGVRGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180
           EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD
Sbjct: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180

Query: 181 GGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG 240
           GGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGG HGGEHDNSKGSGEEGG
Sbjct: 181 GGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGGHGGEHDNSKGSGEEGG 240

Query: 241 YDG 243
           YDG
Sbjct: 241 YDG 243

[Close]

BLAST of Cp4.1LG14g09730 vs. ExPASy TrEMBL
Match: A0A6J1HQH3 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 GN=LOC111465170 PE=4 SV=1)

HSP 1 Score: 395 bits (1016), Expect = 1.18e-133
Identity = 237/243 (97.53%), Postives = 238/243 (97.94%), Query Frame = 0


Query: 1   MAITRVLCLTFLLLVGFGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNVY 60
           MAITRVLCLTFLLL+G GLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDN Y
Sbjct: 1   MAITRVLCLTFLLLIGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60

Query: 61  GGRSGGGYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120
           GGRSGG YGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG
Sbjct: 61  GGRSGGEYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180
           EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGN NGYGDSHGYGNGGGVD
Sbjct: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNRNGYGDSHGYGNGGGVD 180

Query: 181 GGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG 240
           GGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGG HGGEHDNSKGSGEEGG
Sbjct: 181 GGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGGHGGEHDNSKGSGEEGG 240

Query: 241 YDG 243
           YDG
Sbjct: 241 YDG 243

[Close]

BLAST of Cp4.1LG14g09730 vs. ExPASy TrEMBL
Match: A0A6J1L3G2 (glycine-rich cell wall structural protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111500188 PE=4 SV=1)

HSP 1 Score: 393 bits (1010), Expect = 9.59e-133
Identity = 236/240 (98.33%), Postives = 237/240 (98.75%), Query Frame = 0


Query: 243 GLGLASAARTLLDYDPRTHHYGYDRPNPREGYDSGHRDESYDNVYGGRSGGGYGVGGSAL 302
           GLGL SAARTLLDYDPRT HYGY+RPNPREGYDSGHRDESYDNVYGGRSGG YGVGGSAL
Sbjct: 16  GLGLTSAARTLLDYDPRTRHYGYNRPNPREGYDSGHRDESYDNVYGGRSGGEYGVGGSAL 75

Query: 303 GGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGGEDHGVGYGGGRSGGY 362
           GGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGGEDHGVGYGGGRSGGY
Sbjct: 76  GGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGGEDHGVGYGGGRSGGY 135

Query: 363 ENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHAGG 422
           ENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHAGG
Sbjct: 136 ENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHAGG 195

Query: 423 SGIGAGGGYGGHAGGSGIGAGGAYGSGGGHGGEHDNSKGSGEEGGYDGGYALTNSISNKN 482
           SGIGAGGGYGGHAGGSGIGAGGAYGSGGGHGGEHDNSKGSGEEGGYDGGYALTNSISNKN
Sbjct: 196 SGIGAGGGYGGHAGGSGIGAGGAYGSGGGHGGEHDNSKGSGEEGGYDGGYALTNSISNKN 255

[Close]

BLAST of Cp4.1LG14g09730 vs. ExPASy TrEMBL
Match: A0A6J1E5N6 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662 GN=LOC111430999 PE=4 SV=1)

HSP 1 Score: 392 bits (1008), Expect = 1.93e-132
Identity = 236/243 (97.12%), Postives = 237/243 (97.53%), Query Frame = 0


Query: 1   MAITRVLCLTFLLLVGFGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNVY 60
           MAITRVLCL+FLLLVG GLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDN Y
Sbjct: 1   MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60

Query: 61  GGRSGGGYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120
           GGRSGGGYG G SALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG
Sbjct: 61  GGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180
           EDHGVGY GGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD
Sbjct: 121 EDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180

Query: 181 GGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG 240
           GGYGRGDGVG HAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG
Sbjct: 181 GGYGRGDGVGSHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG 240

Query: 241 YDG 243
           YDG
Sbjct: 241 YDG 243

[Close]

BLAST of Cp4.1LG14g09730 vs. ExPASy TrEMBL
Match: A0A6J1E6B7 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662 GN=LOC111430998 PE=4 SV=1)

HSP 1 Score: 392 bits (1006), Expect = 3.87e-132
Identity = 236/243 (97.12%), Postives = 237/243 (97.53%), Query Frame = 0


Query: 1   MAITRVLCLTFLLLVGFGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNVY 60
           MAITRVLCL+FLLLVG GLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDN Y
Sbjct: 1   MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60

Query: 61  GGRSGGGYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120
           GGRSGGGYG   SALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG
Sbjct: 61  GGRSGGGYGDRSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180
           EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD
Sbjct: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180

Query: 181 GGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG 240
           GGYGRGDGVG HAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG
Sbjct: 181 GGYGRGDGVGSHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG 240

Query: 241 YDG 243
           YDG
Sbjct: 241 YDG 243

[Close]

BLAST of Cp4.1LG14g09730 vs. TAIR 10
Match: AT3G23450.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; Has 694543 Blast hits to 47111 proteins in 2535 species: Archae - 1794; Bacteria - 163056; Metazoa - 258989; Fungi - 49151; Plants - 70496; Viruses - 8919; Other Eukaryotes - 142138 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 1.6e-06
Identity = 191/447 (42.73%), Postives = 217/447 (48.55%), Query Frame = 0


Query: 49  SGHRDESYDNVYGGRSGGGY------GVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGV 108
           S  RDE    + GG  GGG+      G GG   GG+G G GG  G G+G GGG   GGG 
Sbjct: 29  SSGRDEDEKTLVGGGKGGGFGGGFGGGAGGGVGGGAGGGFGGGAGGGFGGGGG---GGGG 88

Query: 109 SSGVGGAGYGSGSRYGGGEDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNG 168
             G GG G+G G  +GGG  HG G GGG  GG+  G  GG+G+G     G G   G G G
Sbjct: 89  GGGGGGGGFGGGGGFGGG--HGGGVGGGVGGGHGGGVGGGFGKGGGIGGGIGKGGGVGGG 148

Query: 169 NGNGYGDSHGYGNGGGVDGGYGRGDGVGGHAG-----GSGIGAGGGYGGHAGGSGIGAGG 228
            G G G   G G GGGV GG G+G G+GG  G     G GIG GGG GG  G  G G GG
Sbjct: 149 IGKGGGIGGGIGKGGGVGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGIGKGG-GIGG 208

Query: 229 AYGSGGAHGGEHDNSKGSGEEGGYDGLGLASAARTLLDYDPRTHHYGYDRPNPREGYDSG 288
             G GG  GG      G G+ GG  G G+                          G   G
Sbjct: 209 GIGKGGGVGG------GFGKGGGVGG-GIGKGG----------------------GVGGG 268

Query: 289 HRDESYDNVYGGRSGGGYGVGGSALGGSGYGS--GGVRGSGYGNGGGNAYGGGVSSGVG- 348
                     GG  GGG G GG   GG G G   GG  G G G GGG   GGG+  G+G 
Sbjct: 269 FGK-------GGGVGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGIGK 328

Query: 349 GAGYGSGSRYGGGEDHGVGYGGGRSGGYENGG--NGGYGQGRDHDIGYGSRNGNGNGNGN 408
           G G G G   GGG   G+G GGG  GG   GG   GG G G+   IG G   G G G G 
Sbjct: 329 GGGIGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGGGFGKGGGIGGGIGKGGGIGGGG 388

Query: 409 GYGD----SHGYGNGGGVDGGYGRGDGVGGH-AGGSGIGAGGGYGGHAG-GSGIGAGGAY 468
           G+G       G G GGG+ GG+G+G G+GG   GG G G GGG+G   G G GIG GG +
Sbjct: 389 GFGKGGGIGGGIGKGGGIGGGFGKGGGIGGGIGGGGGFGGGGGFGKGGGIGGGIGKGGGF 433

Query: 469 GSGG--GHGGEHDNSKGSGEEGGYDGG 472
           G GG  G GG      G G+ GG+ GG
Sbjct: 449 GGGGGFGKGGGIGGGGGFGKGGGFGGG 433

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g09730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10496	1.1e-15	44.35	Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2...	[more]
P27483	4.1e-04	44.47	Glycine-rich cell wall structural protein OS=Arabidopsis thaliana OX=3702 GN=At3...	[more]

BLAST of Cp4.1LG14g09730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023552983.1	9.96e-278	88.56	glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo]	[more]
XP_023552981.1	4.89e-138	100.00	glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo]	[more]
XP_023552980.1	3.23e-136	100.00	glycine-rich cell wall structural protein 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_023552978.1	1.06e-134	98.35	glycine-rich cell wall structural protein 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_023552979.1	5.51e-134	99.58	glycine-rich cell wall structural protein 2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG14g09730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L118	8.34e-134	97.94	glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1HQH3	1.18e-133	97.53	glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1L3G2	9.59e-133	98.33	glycine-rich cell wall structural protein 2-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1E5N6	1.93e-132	97.12	glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1E6B7	3.87e-132	97.12	glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of Cp4.1LG14g09730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23450.1	1.6e-06	42.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01228	EGGSHELL	coord: 156..166 score: 38.64 coord: 126..141 score: 52.34 coord: 201..219 score: 43.42 coord: 4..20 score: 35.29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 442..482
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 365..392
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..281

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g09730.1	Cp4.1LG14g09730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding