Cp4.1LG14g09440 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG14g09440
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
LocationCp4.1LG14: 8008037 .. 8012960 (+)
RNA-Seq ExpressionCp4.1LG14g09440
SyntenyCp4.1LG14g09440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTTATTTATTTATTCATTGTCTTTGTGGATTTTGCAATTTTTTCCCCAAAATTAATTGTAAATTCTGATAACAAAGAAACCAAGGGCGTTACTTTTCCCCCATTGCTCTGAAGAACAATAACTCAAAAGAAGAACGGACGACGATCTTGGAATTTTGAAGAGGGAAAAATCTCCGAAAATGGCAGGCAGGCTGAGCAATTTGGGTTCGATCCTTGGCGGAAATGGAGTTGTTGCTCGCTCAATTGATTCGTCTCTTCGACGTCGCTCCGGCATGGGCCTTCCTGTTGGCAAACACATCGTCCCCGATAAACCCGTAAGCATTTCACCCTTCTACCTGCAAATTTGTTGCAAAATTAGTATCTCTTTGATGTAGATTATGTAGGACTTATGATCGTTTTTCCATTTTTAGCTTCCTGTGAACGATGAACTGGTATGGGACAATGGAACGCCTTTTCCCGAGCCTTGTATTGATCGTATTGCTGATACGGTTGGGAAGGTATCTCGATTCTCTTGAGGATTTTGTATTTTCATTTCTCCGACAATTTGTATGTTTATTTTGTTTTTGTTCTGATTCAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTATGGCTGTGTGGAACGATAAAGCGTCTAAGATACCATTTGTAAGTTTACTGAACTAGACATCTTTTGTGGATCTTTTGTACTCCGTTCTCTGTTGGACTATTTGATATCTCACCTGCATTGGTGCGTGACTGTTGAAGGTTACATTTGTTGTTCATTACTGTAATGGTTCAAGCCCACCGCTAGCAGATATTGTCCTCTTTCAAGGTTTTAAAATGCGTTTCGTACGGAGAGATTTTTACATCCTTATAAGCAATGCTTAGTTCTCCTCCTCAATCGATGTGAGATCTCACAATCCACCTCTTTAAGGGCCCAGCGTCCTTGCTGGCACATCACCCGGTGTCTGACTTTGATGCCATTTGTAATGGCCCAAGCCTATTGCTAGCAGATATTGTCCTCTTTAGGTTTTCCCTTCTAGGCTTCCCTTCAAGGTTTTAAAACGTGTCTTGTAGGGAGAGGTTTCCACACCCTTATAAGTAATGATTCGTTCTCCTCTCTAATAGATGTGGGATCTCAAAATTACCGTACATTTTGTGAAATATGGTGGTACCCAGTTCAGTGCATTATTTGGATTGAATTTTCTTTTCTCATATATTGGGATAATTGTGCTTTGTATACCGCATTTTATTTCTTTGATTGAGCGCTGGAAAAATGGGCGGAGCTAGAGAAATAACTCTTGAGATGTCTAACTTATAATTTGGTGCAAAGCAGAACAGTTTTTTAGATTAATTTTATCCTACCACACTGAGAGTATCTGTGTAACATGCCTAGCCTAGTAGTAAGGGACTTTACTAACCGTAGTAGCAAGTCAAAGAGCTTGTTATGACACACGATTCGTTTTTTTAGACCCTGGCCTGATGTGAGGCATCCATACTGACGGGCACACCTTTTTCGATAACTGGAGTGTTATTCTCCCTTCTATGTTCAAGCAATGAGGTTCTGGGAGAGTAAGAAGGATAATAGGAGCATGTTAGAGGAATTAGACAGCAGAGAAGGAAAGGGAGATAAGAGGTTATTATTAATGTTTATTCATAGTCTTAACACTCTCGTTCCATTTCTGTGTGTGAAAATTAGTAAAAGGCTCAACAGGCGATCATTAATATTAATTGGAGAGAAAATGAAATTACACGCTTTTAAACCTATCTTTTGCTCTTATACCATGTTGGTTGATCATTAGAACATCCAAAAGCTTAAACTGATAGCTTTTGGTATGTTCAATATTCATTCTTATTCTTAAAATCTGGAGAAGTTATCTTAGTTGGATGTTGGAGAAGGTCATCTTGAATCTACCCTTTGGGAATAAAGGACATGTTTATGGCTGGCCTAGCTTATTCCCTCAACATCATGTTGTTAATATGATTGGATAGAAATAGATCTTTTCTTGGGTTTATGAAATTTTTAAAAAAGAGGTGGAGACAACTGCAACTCAAAGGAGTGTCAGAAGCCAAACTATAAGAATGGAATTATTATGTAATTTACACCAAGAGCTAGGCAGATGACATTATCAAGGAATCTATAATAATCACAATCTTTCCCCCAAAAGGCCTTTGATTTTTCCCCAACCAAGTAGACGAAAAGAAGGCCTTAATGAGGTGTTTCCGTAGTAGCTCATTCTCTTTCTTAAAAGGATGACCCACGAGAGTATGAGAAAGAAGCACTTACGAGTCTTTTGGAAGAGCCATGGGCCTGTTGAAGGAGGATAACATCTCGACCCAAATCCTTGTTGTCAAAGAAGTGAGTAGGGGTATCCTCCTTCCATTTTTAAGAACAAGTGAGTAGGGGTAGGAGTATGAGGGATTTTAAAGAAACGACATTTCGTTGAAAATAATGAATATACAAACAAAGAAAGAGGCCTGCAAAAACACTAGCTCCAAAAGATGGTCCATCCTCAACTACGGAGGAACAGATTCCAGTCCAATGTGTGCTAACTGATAGTTATAAAACTCTCTAGAAACTGAAGCCCACAAAGAGGTTGGAAATTTGACATTGTCCCACACTCCTGAAATTCTACTACCACTCGAGCCATGTACCCCAGAAAACTGCAAAAGACGCATGCCAAATGGCCCAAAAATCTCTATTAAGGTACCCAGAACCTGTCTACAATACACAAGGTCCTCCACTGAGTACTCAGCAAGAAGGAAGAAGGCTTCCGATGGCAATCCTCCCCTGTAATACCTGCCACACTAAGAATATTACCTTCTGGTGGATCTTAACCTTCCAGAGAGAGGCAAATAGAAGGGTACCCAGGGGGACGAAGGGACACAAACGAGGTGAAAATAAGAAATGCAAGAGAAGGATTGTGCAAGGAGATGCAACCACAAACAAAAGCTGATCGTACTTGTTAACAGATGCATTAGAAGTGACGTTAGGACACCCTATAGTTTCTCCAGCCTACAGCAAATTTGGGCCTTCTTTTCTTTTTGGCCCAGCATAGTTCCTCTGAAAAAAGAGCCTGATTTAAAAGATTTATCTGAGCTGCACACGCCCTCTTGGAAACCGAAGGGGACCCACTCTTTGCAGGTTGAAACACTTCACCTGGTTGCTAGAATACACTTGGCTACTTGTCTTAGACGTCAAAATCGGCTTCTGAAAGAGCGTCAAAAAAGGAAGGGTGTAGTCCAACTAAGATATTGAGAACTTAAACCATTTTTAGCTGATATTGACATATCTGATGGTTGGGAAAACAAAAGCTAAAATGAACCCGCTACCGACCAACTCTTCCATTTTTCCAACTGTGAAGACACGAGATAGGAGAATGGAAGCAACTTTATTGAAAGTTTTTCCTGTATTCCTTTTTGCCCCAAAAAAGAAAGTGTTCTTTCACCCACAAACCTCACAGAAAGAGAATGTGATATCCCCACAGAGCCAATGGGTTATGAAAATAGACTCCCAATGGGCATTAATATGCACGAGGTCATCATTACGTAAGCCTCTATAGAGGGTGCACCAAGTGGAGGCATATTTTTTCACAAGATCCCCTAATTCCTCGACAGTAGGCTCTTTCCCTTTAGAAACTCTTTGGTTTCTCTTGAACCACAGTCTCCTAAGATTGTCTGTCACGGCCTTGGACCATAAAACAAGCGCTTGCCCTTAAAAGGAGAGCCTTCCGAAAGCTGGTAAAGGGTGGTTTAATAACTTTGGGGACACTAGTCTAAGCCAAAAGAATGAAAGAGCTTTGATTTCGACCAACTAGGAGCCATGAAAGGGCCATTGCAAAGATACGTGAGGATGACTCTAAATTACTTTTACACATGATGCACCAGGTAGTGCAAACTGGCATATTTGAGAGTTTCCTTCGGATCCAAGCACGAGTTTTCAATTTTCTTGAATAAAAGATCAAGTGAAAACTTTCATCTTCTTAGCAACCTTGGCCTTTCAAATCACATCGATTTGGAGTTAATGAACAGCGGCCCTTCTCTCATTGATGAAGGGGGTGAGAGCCCACCATTAAGCATATACGGGCAATTGTTTCATCCCAATATAAGTTACACAGAGAAAACATCTCAAGGGGTTCAAGGGATGAAACCTATTATGTATTCTTGTTGTAGTTGTTTGTATAGCCTGGCTTTGTATACTTTATGGTGTTTTTCAGTCATTACGCTTACTTGAGATTTGCATAGAAATCGAACGAACTATTGGCCGTGTTTCCTGTGACTGCCTTTCGAAAATGAAACTGACTAAAAAACGTAGTTTATGATTCAACTCTTTTTGGAGACAGCAATTTTTCCCATCTAATAATTGCACCAAAACAGCTTGCATTTGTCCCTGGATTCTTTTCCATGATGCATTATAAGACTTCTCTTTTCTTTCTTCTTTCATATCAATTCAGCAGTATTTTCTTGATCATCATGTTCCTCCTCGATGGGTCATTGTATTATTATTTATCGTTCAACTCTTTGAACCCTTGATGTTTTATTTTGGATGAATTTAGCATTGTTAAGATAAACTTGATCCTCCTTTTAATCAGGCGCCGAAAGTGTATCCGTATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAGATAGGCGGCCTCACGCTGAATGGACCCTTTTGGTACTGTTTCTTTTTCAGATACAAATCGTTGTTGAATTATATGCCTTTGGAATTTGCTATGCATCAAAATAAATGGATTTTGTTGCCTGTTCTGAAATCTCTCTTTGGCATTTGTGTAAATCACTTTCTACACTTCGATTCTTATAACGAGGTTGTGAAGACTTCTTGCCATCAATGATGGATAATGAATGATTCAATAAATTATCATTTTGTGTTATATAACCATGTT

mRNA sequence

TATTTATTTATTTATTCATTGTCTTTGTGGATTTTGCAATTTTTTCCCCAAAATTAATTGTAAATTCTGATAACAAAGAAACCAAGGGCGTTACTTTTCCCCCATTGCTCTGAAGAACAATAACTCAAAAGAAGAACGGACGACGATCTTGGAATTTTGAAGAGGGAAAAATCTCCGAAAATGGCAGGCAGGCTGAGCAATTTGGGTTCGATCCTTGGCGGAAATGGAGTTGTTGCTCGCTCAATTGATTCGTCTCTTCGACGTCGCTCCGGCATGGGCCTTCCTGTTGGCAAACACATCGTCCCCGATAAACCCCTTCCTGTGAACGATGAACTGGTATGGGACAATGGAACGCCTTTTCCCGAGCCTTGTATTGATCGTATTGCTGATACGGTTGGGAAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTATGGCTGTGTGGAACGATAAAGCGTCTAAGATACCATTTGCGCCGAAAGTGTATCCGTATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAGATAGGCGGCCTCACGCTGAATGGACCCTTTTGGTACTGTTTCTTTTTCAGATACAAATCGTTGTTGAATTATATGCCTTTGGAATTTGCTATGCATCAAAATAAATGGATTTTGTTGCCTGTTCTGAAATCTCTCTTTGGCATTTGTGTAAATCACTTTCTACACTTCGATTCTTATAACGAGGTTGTGAAGACTTCTTGCCATCAATGATGGATAATGAATGATTCAATAAATTATCATTTTGTGTTATATAACCATGTT

Coding sequence (CDS)

ATGGCAGGCAGGCTGAGCAATTTGGGTTCGATCCTTGGCGGAAATGGAGTTGTTGCTCGCTCAATTGATTCGTCTCTTCGACGTCGCTCCGGCATGGGCCTTCCTGTTGGCAAACACATCGTCCCCGATAAACCCCTTCCTGTGAACGATGAACTGGTATGGGACAATGGAACGCCTTTTCCCGAGCCTTGTATTGATCGTATTGCTGATACGGTTGGGAAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTATGGCTGTGTGGAACGATAAAGCGTCTAAGATACCATTTGCGCCGAAAGTGTATCCGTATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAG

Protein sequence

MAGRLSNLGSILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFMAVWNDKASKIPFAPKVYPYDNLRVELGGEPEA
Homology
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BLAST of Cp4.1LG14g09440 vs. ExPASy Swiss-Prot
Match: Q9FGK0 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g47570 PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.6e-56
Identity = 104/125 (83.20%), Postives = 113/125 (90.40%), Query Frame = 0 

Query: 1   MAGRLSNLGS-ILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAGRLS + S I+GGNGVVARS+ SSLR+R+GMGLPVGKHIVPDKPL VNDEL+WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFMAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWL GGLGFF  LG +AV NDKASK+PF P+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGGEP 125
           LGGEP
Sbjct: 121 LGGEP 125

[Close]
BLAST of Cp4.1LG14g09440 vs. NCBI nr
Match: XP_023553279.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263 bits (672), Expect = 9.36e-89
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0 

Query: 1   MAGRLSNLGSILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPF 60
           MAGRLSNLGSILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPF
Sbjct: 1   MAGRLSNLGSILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPF 60

Query: 61  PEPCIDRIADTVGKYEALAWLCGGLGFFASLGFMAVWNDKASKIPFAPKVYPYDNLRVEL 120
           PEPCIDRIADTVGKYEALAWLCGGLGFFASLGFMAVWNDKASKIPFAPKVYPYDNLRVEL
Sbjct: 61  PEPCIDRIADTVGKYEALAWLCGGLGFFASLGFMAVWNDKASKIPFAPKVYPYDNLRVEL 120

Query: 121 GGEPEA 126
           GGEPEA
Sbjct: 121 GGEPEA 126

[Close]
BLAST of Cp4.1LG14g09440 vs. NCBI nr
Match: XP_022923346.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita moschata] >KAG6577693.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015735.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255 bits (652), Expect = 1.09e-85
Identity = 124/127 (97.64%), Postives = 126/127 (99.21%), Query Frame = 0 

Query: 1   MAGRLSNLGS-ILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAGRLSNLGS ILGGNGVVARSIDSSLRRRSGMGLPVGKHIVP+KPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFMAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGF+AVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 126
           LGGEPEA
Sbjct: 121 LGGEPEA 127

[Close]
BLAST of Cp4.1LG14g09440 vs. NCBI nr
Match: XP_022965223.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita maxima])

HSP 1 Score: 254 bits (649), Expect = 3.13e-85
Identity = 124/127 (97.64%), Postives = 125/127 (98.43%), Query Frame = 0 

Query: 1   MAGRLSNLGS-ILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAGRLSNLGS ILGGNGVVARSIDSSLR RSGMGLPVGKHIVPDKPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRCRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFMAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGF+AVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 126
           LGGEPEA
Sbjct: 121 LGGEPEA 127

[Close]
BLAST of Cp4.1LG14g09440 vs. NCBI nr
Match: XP_038903151.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Benincasa hispida])

HSP 1 Score: 248 bits (632), Expect = 1.23e-82
Identity = 121/127 (95.28%), Postives = 122/127 (96.06%), Query Frame = 0 

Query: 1   MAGRLSNLGS-ILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAGRLSNL S ILGGNGVV RSI SSLR RSGMGLPVGKHIVPDKPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLSSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFMAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGF+AVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 126
           LGGEPEA
Sbjct: 121 LGGEPEA 127

[Close]
BLAST of Cp4.1LG14g09440 vs. NCBI nr
Match: XP_004147198.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis sativus] >XP_008448866.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis melo] >KGN55877.1 hypothetical protein Csa_010471 [Cucumis sativus])

HSP 1 Score: 244 bits (623), Expect = 2.89e-81
Identity = 118/127 (92.91%), Postives = 122/127 (96.06%), Query Frame = 0 

Query: 1   MAGRLSNLGS-ILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAG+L+NLGS ILGGNGVV RSI SSLR RSGMGLPVGKHIVPDKPLP NDELVWDNGTP
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFMAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGF+AVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 126
           LGG+PEA
Sbjct: 121 LGGDPEA 127

[Close]
BLAST of Cp4.1LG14g09440 vs. ExPASy TrEMBL
Match: A0A6J1E6K0 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111431068 PE=4 SV=1)

HSP 1 Score: 255 bits (652), Expect = 5.27e-86
Identity = 124/127 (97.64%), Postives = 126/127 (99.21%), Query Frame = 0 

Query: 1   MAGRLSNLGS-ILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAGRLSNLGS ILGGNGVVARSIDSSLRRRSGMGLPVGKHIVP+KPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFMAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGF+AVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 126
           LGGEPEA
Sbjct: 121 LGGEPEA 127

[Close]
BLAST of Cp4.1LG14g09440 vs. ExPASy TrEMBL
Match: A0A6J1HN93 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111465142 PE=4 SV=1)

HSP 1 Score: 254 bits (649), Expect = 1.51e-85
Identity = 124/127 (97.64%), Postives = 125/127 (98.43%), Query Frame = 0 

Query: 1   MAGRLSNLGS-ILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAGRLSNLGS ILGGNGVVARSIDSSLR RSGMGLPVGKHIVPDKPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRCRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFMAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGF+AVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 126
           LGGEPEA
Sbjct: 121 LGGEPEA 127

[Close]
BLAST of Cp4.1LG14g09440 vs. ExPASy TrEMBL
Match: A0A0A0L5J8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G021140 PE=4 SV=1)

HSP 1 Score: 244 bits (623), Expect = 1.40e-81
Identity = 118/127 (92.91%), Postives = 122/127 (96.06%), Query Frame = 0 

Query: 1   MAGRLSNLGS-ILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAG+L+NLGS ILGGNGVV RSI SSLR RSGMGLPVGKHIVPDKPLP NDELVWDNGTP
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFMAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGF+AVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 126
           LGG+PEA
Sbjct: 121 LGGDPEA 127

[Close]
BLAST of Cp4.1LG14g09440 vs. ExPASy TrEMBL
Match: A0A1S3BK37 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490900 PE=4 SV=1)

HSP 1 Score: 244 bits (623), Expect = 1.40e-81
Identity = 118/127 (92.91%), Postives = 122/127 (96.06%), Query Frame = 0 

Query: 1   MAGRLSNLGS-ILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAG+L+NLGS ILGGNGVV RSI SSLR RSGMGLPVGKHIVPDKPLP NDELVWDNGTP
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFMAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGF+AVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 126
           LGG+PEA
Sbjct: 121 LGGDPEA 127

[Close]
BLAST of Cp4.1LG14g09440 vs. ExPASy TrEMBL
Match: A0A6J1KTK9 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111498540 PE=4 SV=1)

HSP 1 Score: 241 bits (616), Expect = 1.81e-80
Identity = 117/127 (92.13%), Postives = 120/127 (94.49%), Query Frame = 0 

Query: 1   MAGRLSNLGS-ILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAGRLSNLGS +LGGNGVV RSI SSLR RSGMGLPVGKHIVPDKPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFMAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG +AVWNDKAS+IPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 126
           LGGE EA
Sbjct: 121 LGGEAEA 127

[Close]
BLAST of Cp4.1LG14g09440 vs. TAIR 10
Match: AT5G47570.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 219.9 bits (559), Expect = 1.1e-57
Identity = 104/125 (83.20%), Postives = 113/125 (90.40%), Query Frame = 0 

Query: 1   MAGRLSNLGS-ILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAGRLS + S I+GGNGVVARS+ SSLR+R+GMGLPVGKHIVPDKPL VNDEL+WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFMAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWL GGLGFF  LG +AV NDKASK+PF P+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGGEP 125
           LGGEP
Sbjct: 121 LGGEP 125

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g09440 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FGK01.6e-5683.20NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Ar... [more]
BLAST of Cp4.1LG14g09440 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023553279.19.36e-89100.00NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu... [more]
XP_022923346.11.09e-8597.64NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu... [more]
XP_022965223.13.13e-8597.64NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu... [more]
XP_038903151.11.23e-8295.28NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Beni... [more]
XP_004147198.12.89e-8192.91NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu... [more]
BLAST of Cp4.1LG14g09440 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E6K05.27e-8697.64NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cu... [more]
A0A6J1HN931.51e-8597.64NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cu... [more]
A0A0A0L5J81.40e-8192.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G021140 PE=4 SV=1[more]
A0A1S3BK371.40e-8192.91NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cu... [more]
A0A6J1KTK91.81e-8092.13NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like ... [more]
BLAST of Cp4.1LG14g09440 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G47570.11.1e-5783.20unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038863Putative NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrialPANTHERPTHR36401NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 8, MITOCHONDRIALcoord: 1..124
NoneNo IPR availablePANTHERPTHR36401:SF2BNAC02G33360D PROTEINcoord: 1..124

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g09440.1Cp4.1LG14g09440.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005747 mitochondrial respiratory chain complex I